Prupe.6G143100_v2.0.a1

Cyclic nucleotide-gated ion channel 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0000119
Physical Location & Seq
Forward (+)
11581291 .. 11586673
5383 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G143100.1

Sequence Viewer

Length: 1944 bp
ATGAAACCAGATGAGAGCTTTGTGAATCCCAACGAGAGTTTTGTGAATCCTGACGAGAGCTTTGTGAATCCTGACAGTTTTATCCAAAGCACTGGGAAGAGGCCTCCCGCAAAAGGTGAAGGAAATTCAGCAAGTAAAAAATGGCCAACAGCAAAGGAAATTTTTGACCCACAGGGGCCTTTCCTTCCATTATGGAACAAGATATTTGTAATTGCATGTGTGATTGCAGTCTCATTGGATCCTTTGTTCTTTTACATCCCAAACATCAATGAGAAATACAAGTGCCTTGGTAAGGACAAGAAGTTGAGGACTGCAGCTCTTCTTCTCCGATCGCTCATGGACCTCACTTTCGTAACCCATATGGTACATCAGATTCGTGTCACGGCAAAAATCGTGGCCTCGGAGCAGGTATCAAGAAGAGGAAAGTCAGATTGGTTATGCAGAAGAAGAGAGTTGGTTAAGGCAATGCCCTGGTTTTCCATCCTAATTGACTTTCTTGCTGCTCTTCCAATCCCACAATTAGCAATAGGAGTTGTCTTTTTCAGAAGGAAAAGCTCTCAGTATTTTCGCAAAAGGAGGATTATGACCTTCCTTCTTCTCTTCCAATATCTGCCAAGGGTTTATCGAATATACCTAACGTATGAGGAACTTACAAGGATCAAAAGATGGGTTAGAGGTGCATTTAATTTTTTTCTATACATCCTCGCTAGTCATGTACTTGGAGGTTTTTGGTACTTCTTTTCGATCCAACGAGAGACGTCATGTTGGCATCATGCTTGTAAAAGAAGTACTGAAACTTTTTGTGTCACTAATTATCACTTTCATTGCGATGATTATAGTCTGGGAGACGACATTACCACTTCAAGTAAAGTCAAATTCCTAAATAAATTTTGCCCATTAGATCCACCGAACTCCTCAATATTTGATTTTGGAATATTTGTTGATGCCCTTAAGTCGGGGTCAACACCTTTTATGCAAAAGTTCTTTCACTCTTATTGGTGGGGCCTGCGAAATCTCAGTAACTTTGGGACGAATTTAGAAACAAGTAGTTACGTGTGGGAAAACTGCTTTGCAATTCTAATTTCTGTTATTGGCTTGCTACTCTTTTTGTATCTCATCGGAAATGTACAGACGTATATACAGTTGGCAACTACAAAATCAGAGAACATATGCCAGAAGATGGCGATGAAAGACCTAGAGATTCAATTGTGGATGTCTAGAAATGGTCTTCCAGAGGATATGAAGACGGTGATTATGAAAAATGTCAAACAAAGACTGGAACAAGACAAAGATGCTGATGTAGAGAATATGTTCTCTATTCTCTCACAGAATAACAGGAAATCTATAAAGCGTTATCTCTGCATGGATACGTTGAAGAAAGTACCAATGCTTCAAAGTACTGATGAAAGGGTGTTGAAAGTGATATGCAACTATCTGAAGCCAGTGATCTACTCGGAGAATAGCTACGTGATTCGAGCAGGAGAACCACTTGACTTGATGCTCTTCATCACACAAGGAATTATATGGACCTTTGCAGGTACTCACGTTGATGGTTCTGGAAAATTAAATAGTTCCTCTTCATCATCAACATCATCAATCACAAGGTGTCTTGAGAAAGGCGATTTTTATGGGGAAGAACTTCTTAGCCGAATTTCGACATACATCTCCTTTTCGGACCTTCCTATCTGCACCGAAAATGTGAAATGTCATACAAAAGTAGAAGCATTTGCTCTACTGGCCAAGGACTTGAAGACAGTAGTGACTGAATTTTGGTGGTATTTTCCCACTTTGAACAATTCAGAGTTAGAGGAGAAGTTGGCACTTTCTTCTGTTCGAGCAGTCCGTCGACGCAATCGAGAAAAGAAGGCTACAAGGTCTCCCAAGTTGGCTGCTGATCATCGAGAGCAAAGGCTCGCATATCAACGACTACATGCGTCCTGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
Ion_trans

Protein Analysis

648

Amino Acids

74.92

Weight (kDa)

9.32

Isoelectric Point (pI)

46.05

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000119)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g10570 FvH4_4g36390 FvH4_7g31840 FvH4_7g31840 FvH4_7g31850 FvH4_7g31850 FvH4_7g31861 FvH4_7g31861 FvH4_7g31950
malus_domestica MD01G1054600.v1.1 MD01G1221100.v1.1 MD01G1221400.v1.1 MD01G1221600.v1.1 MD01G1221800.v1.1 MD01G1222000.v1.1 MD01G1222100.v1.1 MD07G1140800.v1.1 MD07G1291200.v1.1 MD07G1291400.v1.1 MD07G1291500.v1.1 MD07G1291700.v1.1 MD07G1292500.v1.1 MD07G1292700.v1.1 MD07G1292800.v1.1 MD07G1292900.v1.1 MD08G1241600.v1.1 MD11G1083800.v1.1 MD15G1431600.v1.1
prunus_persica Prupe.1G017800_v2.0.a1 Prupe.1G017800_v2.0.a1 Prupe.1G162800_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312700_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G143000_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1
pyrus_communis pycom01g23050 pycom01g23070 pycom01g23090 pycom01g23100 pycom01g23110 pycom01g23120 pycom01g23170 pycom07g26410 pycom07g26440 pycom07g26470 pycom07g26480 pycom07g26490 pycom07g26500 pycom07g26510 pycom07g26530 pycom07g26540 pycom07g26570 pycom07g26580 pycom07g26590 pycom08g20940
rosa_chinensis RchiOBHm_Chr1g0324571 RchiOBHm_Chr1g0336181 RchiOBHm_Chr1g0381061 RchiOBHm_Chr1g0381091 RchiOBHm_Chr1g0381121 RchiOBHm_Chr1g0381131 RchiOBHm_Chr1g0381141 RchiOBHm_Chr1g0381161 RchiOBHm_Chr1g0381211 RchiOBHm_Chr2g0110361 RchiOBHm_Chr2g0120231 RchiOBHm_Chr3g0486281 RchiOBHm_Chr3g0486311 RchiOBHm_Chr3g0486401 RchiOBHm_Chr4g0409511 RchiOBHm_Chr4g0409521 RchiOBHm_Chr5g0017271 RchiOBHm_Chr5g0048781 RchiOBHm_Chr5g0048811
rosa_laevigata RLG00000002401 RLG00000008559 RLG00000017798 RLG00000017799 RLG00000023082 RLG00000023088 RLG00000026230 RLG00000026238 RLG00000026240 RLG00000026241 RLG00000026242 RLG00000026243 RLG00000026244 RLG00000026246 RLG00000026247 RLG00000026248 RLG00000029876 RLG00000030189 RLG00000034579
rosa_multiflora Rmu_co8101374.1_g000001 Rmu_co8309149.1_g000001 Rmu_co8450063.1_g000001 Rmu_sc0000441.1_g000094 Rmu_sc0000479.1_g000005 Rmu_sc0000647.1_g000006 Rmu_sc0001393.1_g000031 Rmu_sc0001423.1_g000037 Rmu_sc0001616.1_g000015 Rmu_sc0001857.1_g000011 Rmu_sc0002183.1_g000013 Rmu_sc0002183.1_g000028 Rmu_sc0002183.1_g000030 Rmu_sc0002688.1_g000003 Rmu_sc0002688.1_g000020 Rmu_sc0003801.1_g000003 Rmu_sc0003801.1_g000004 Rmu_sc0004125.1_g000006 Rmu_sc0004494.1_g000005 Rmu_sc0004494.1_g000006 Rmu_sc0004494.1_g000008 Rmu_sc0004494.1_g000009 Rmu_sc0005842.1_g000004 Rmu_sc0006872.1_g000001 Rmu_sc0006872.1_g000005 Rmu_sc0006872.1_g000009 Rmu_sc0006872.1_g000010 Rmu_sc0008053.1_g000026
rosa_roxburghii Rroxscaffold_159G00432960 Rroxscaffold_1G00033060 Rroxscaffold_2G00123150 Rroxscaffold_2G00123170 Rroxscaffold_2G00133500 Rroxscaffold_2G00133550 Rroxscaffold_4G00278650 Rroxscaffold_4G00278750 Rroxscaffold_4G00278790 Rroxscaffold_4G00278800 Rroxscaffold_4G00278810 Rroxscaffold_4G00325390 Rroxscaffold_5G00354010 Rroxscaffold_6G00395890 Rroxscaffold_6G00395900 Rroxscaffold_6G00395920
rosa_rugosa Rorug01G0046900.1 Rorug01G0427000 Rorug01G0427100 Rorug01G0427200 Rorug01G0427300 Rorug01G0427400 Rorug01G0427500 Rorug01G0427500 Rorug01G0427600 Rorug01G0427600 Rorug01G0427700 Rorug01G0427700 Rorug01G0427800 Rorug01G0428700 Rorug02G0166400 Rorug02G0166500 Rorug02G0166500 Rorug02G0166600 Rorug02G0166600 Rorug02G0166700 Rorug02G0167300 Rorug02G0167300 Rorug02G0167300 Rorug03G0224600 Rorug03G0224600 Rorug04G0094400 Rorug05G0241100 Rorug05G0241200
rosa_samantha Rh1BG407700 Rh1BG407900 Rh1BG409000 Rh1CG064700 Rh1CG420900 Rh1CG421000 Rh1CG421200 Rh1CG421300 Rh1CG421800 Rh1CG421900 Rh1CG422000 Rh1CG422200 Rh1CG422300 Rh1CG423600 Rh1DG437600 Rh1DG438900 Rh1DG439000 Rh1DG440300 Rh2AG219100 Rh2CG220700 Rh2DG225300 Rh3AG274400 Rh3AG274600 Rh3CG308900 Rh3DG305800 Rh4AG156400 Rh5AG129000 Rh5AG320900 Rh5CG139600
rosa_wichuraiana Rw1G005300 Rw1G039280 Rw1G039300 Rw1G039310 Rw1G039320 Rw1G039330 Rw1G039340 Rw1G039360 Rw1G039390 Rw2G016910 Rw2G022800 Rw3G024330 Rw3G024340 Rw3G024350 Rw3G024400 Rw4G012810 Rw5G030120 Rw5G030280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 761
Acc36I ACCTGC 2 cut(s) 397, 1526
AccB7I CCANNNNNTGG 1 cut(s) 1180
AccI GTMKAC 1 cut(s) 1846
AciI CCGC 1 cut(s) 108
AclWI GGATC 5 cut(s) 233, 246, 665, 739, 896
AcoI YGGCCR 2 cut(s) 143, 1737
AcsI RAATTY 7 cut(s) 124, 159, 875, 887, 1033, 1650, 1766
AcuI CTGAAG 1 cut(s) 1457
AcyI GRCGYC 1 cut(s) 758
AdeI CACNNNGTG 1 cut(s) 1605
AfaI GTAC 8 cut(s) 366, 717, 734, 790, 1128, 1383, 1399, 1540
AfiI CCNNNNNNNGG 4 cut(s) 113, 292, 955, 1180
AflII CTTAAG 1 cut(s) 950
AflIII ACRYGT 1 cut(s) 1053
AgsI TTSAA 7 cut(s) 864, 1205, 1375, 1394, 1417, 1750, 1792
AjnI CCWGG 1 cut(s) 470
AjuI GAANNNNNNNTTGG 2 cut(s) 415, 447
AloI GAACNNNNNNTCC 2 cut(s) 230, 262
AluBI AGCT 5 cut(s) 18, 60, 317, 555, 1464
AluI AGCT 5 cut(s) 18, 60, 317, 555, 1464
Alw26I GTCTC 4 cut(s) 235, 749, 840, 1881
AlwI GGATC 5 cut(s) 233, 246, 665, 739, 896
AoxI GGCC 6 cut(s) 101, 143, 176, 396, 1003, 1737
ApeKI GCWGC 3 cut(s) 314, 500, 1889
ApoI RAATTY 7 cut(s) 124, 159, 875, 887, 1033, 1650, 1766
ArsI GACNNNNNNTTYG 4 cut(s) 44, 76, 332, 364
Asp700I GAANNNNTTC 2 cut(s) 1310, 1638
AspS9I GGNCC 5 cut(s) 176, 340, 1003, 1527, 1675
AsuHPI GGTGA 2 cut(s) 128, 1261
AvaII GGWCC 3 cut(s) 340, 1527, 1675
BaeI ACNNNNGTAYC 2 cut(s) 1530, 1563
BalI TGGCCA 2 cut(s) 145, 1739
BamHI GGATCC 1 cut(s) 238
BarI GAAGNNNNNNTAC 2 cut(s) 1374, 1406
BbsI GAAGAC 3 cut(s) 1220, 1250, 1757
BbvI GCAGC 3 cut(s) 326, 487, 1876
BccI CCATC 4 cut(s) 488, 660, 1174, 1544
BceAI ACGGC 1 cut(s) 399
BciT130I CCWGG 1 cut(s) 472
BciVI GTATCC 1 cut(s) 1360
BclI TGATCA 1 cut(s) 1894
BcoDI GTCTC 4 cut(s) 235, 749, 840, 1881
BfaI CTAG 3 cut(s) 708, 1196, 1218
BfmI CTRYAG 1 cut(s) 312
BfrI CTTAAG 1 cut(s) 950
BfuAI ACCTGC 2 cut(s) 397, 1526
BfuI GTATCC 1 cut(s) 1360
BisI GCNGC 3 cut(s) 315, 501, 1890
BlsI GCNGC 3 cut(s) 316, 502, 1891
BmcAI AGTACT 2 cut(s) 790, 1399
Bme1390I CCNGG 1 cut(s) 472
Bme18I GGWCC 3 cut(s) 340, 1527, 1675
BmgT120I GGNCC 5 cut(s) 176, 340, 1003, 1527, 1675
BmiI GGNNCC 3 cut(s) 177, 240, 1004
BmrFI CCNGG 1 cut(s) 472
BmrI ACTGGG 1 cut(s) 102
BmsI GCATC 4 cut(s) 778, 934, 1282, 1488
BmuI ACTGGG 1 cut(s) 102
BpiI GAAGAC 3 cut(s) 1220, 1250, 1757
BpuEI CTTGAG 1 cut(s) 1631
BsaAI YACGTR 2 cut(s) 1054, 1468
BsaHI GRCGYC 1 cut(s) 758
BsaI GGTCTC 1 cut(s) 1881
BsaJI CCNNGG 5 cut(s) 286, 399, 470, 614, 1740
BsaXI ACNNNNNCTCC 2 cut(s) 1861, 1891
Bsc4I CCNNNNNNNGG 4 cut(s) 113, 292, 955, 1180
Bse1I ACTGG 4 cut(s) 97, 1281, 1442, 1740
Bse3DI GCAATG 2 cut(s) 471, 823
BseBI CCWGG 1 cut(s) 472
BseDI CCNNGG 5 cut(s) 286, 399, 470, 614, 1740
BseGI GGATG 4 cut(s) 255, 480, 699, 1218
BseLI CCNNNNNNNGG 4 cut(s) 113, 292, 955, 1180
BseMI GCAATG 2 cut(s) 471, 823
BseMII CTCAG 2 cut(s) 572, 1030
BseNI ACTGG 4 cut(s) 97, 1281, 1442, 1740
BseRI GAGGAG 2 cut(s) 904, 1823
BseXI GCAGC 3 cut(s) 326, 487, 1876
BsgI GTGCAG 1 cut(s) 1672
Bsh1285I CGRYCG 1 cut(s) 332
BshFI GGCC 6 cut(s) 103, 145, 178, 398, 1005, 1739
BsiEI CGRYCG 1 cut(s) 332
BslFI GGGAC 1 cut(s) 1042
BslI CCNNNNNNNGG 4 cut(s) 113, 292, 955, 1180
BsmAI GTCTC 4 cut(s) 235, 749, 840, 1881
BsmBI CGTCTC 2 cut(s) 749, 840
BsmFI GGGAC 1 cut(s) 1042
BsnI GGCC 6 cut(s) 103, 145, 178, 398, 1005, 1739
Bso31I GGTCTC 1 cut(s) 1881
Bsp1407I TGTACA 1 cut(s) 1126
Bsp143I GATC 7 cut(s) 238, 329, 657, 744, 901, 1446, 1894
BspACI CCGC 1 cut(s) 108
BspANI GGCC 6 cut(s) 103, 145, 178, 398, 1005, 1739
BspCNI CTCAG 2 cut(s) 571, 1029
BspLI GGNNCC 3 cut(s) 177, 240, 1004
BspMAI CTGCAG 1 cut(s) 316
BspMI ACCTGC 2 cut(s) 397, 1526
BspPI GGATC 5 cut(s) 233, 246, 665, 739, 896
BspQI GCTCTTC 3 cut(s) 324, 510, 1508
BspTI CTTAAG 1 cut(s) 950
BspTNI GGTCTC 1 cut(s) 1881
BsrDI GCAATG 2 cut(s) 471, 823
BsrGI TGTACA 1 cut(s) 1126
BsrI ACTGG 4 cut(s) 97, 1281, 1442, 1740
BssECI CCNNGG 5 cut(s) 286, 399, 470, 614, 1740
BssMI GATC 7 cut(s) 238, 329, 657, 744, 901, 1446, 1894
BssNI GRCGYC 1 cut(s) 758
BssT1I CCWWGG 3 cut(s) 286, 614, 1740
Bst2UI CCWGG 1 cut(s) 472
Bst4CI ACNGT 4 cut(s) 77, 1143, 1249, 1756
Bst6I CTCTTC 8 cut(s) 92, 324, 412, 442, 510, 605, 1508, 1582
BstACI GRCGYC 1 cut(s) 758
BstAFI CTTAAG 1 cut(s) 950
BstAUI TGTACA 1 cut(s) 1126
BstBAI YACGTR 2 cut(s) 1054, 1468
BstC8I GCNNGC 3 cut(s) 1007, 1097, 1914
BstDEI CTNAG 3 cut(s) 558, 1016, 1643
BstENI CCTNNNNNAGG 1 cut(s) 290
BstF5I GGATG 4 cut(s) 255, 480, 699, 1218
BstKTI GATC 7 cut(s) 241, 332, 660, 747, 904, 1449, 1897
BstMAI GTCTC 4 cut(s) 235, 749, 840, 1881
BstMBI GATC 7 cut(s) 238, 329, 657, 744, 901, 1446, 1894
BstMCI CGRYCG 1 cut(s) 332
BstMWI GCNNNNNNNGC 1 cut(s) 1736
BstNI CCWGG 1 cut(s) 472
BstNSI RCATGY 2 cut(s) 219, 1934
BstSCI CCNGG 1 cut(s) 470
BstSFI CTRYAG 1 cut(s) 312
BstV1I GCAGC 3 cut(s) 326, 487, 1876
BstV2I GAAGAC 3 cut(s) 1220, 1250, 1757
BstX2I RGATCY 2 cut(s) 238, 901
BstXI CCANNNNNNTGG 1 cut(s) 92
BstYI RGATCY 2 cut(s) 238, 901
BsuI GTATCC 1 cut(s) 1360
BsuRI GGCC 6 cut(s) 103, 145, 178, 398, 1005, 1739
BtgZI GCGATG 2 cut(s) 843, 1199
BtsCI GGATG 4 cut(s) 255, 480, 699, 1218
BtsIMutI CAGTG 2 cut(s) 90, 1449
BveI ACCTGC 2 cut(s) 397, 1526
Cac8I GCNNGC 3 cut(s) 1007, 1097, 1914
Cfr13I GGNCC 5 cut(s) 176, 340, 1003, 1527, 1675
CseI GACGC 2 cut(s) 1857, 1923
Csp6I GTAC 8 cut(s) 365, 716, 733, 789, 1127, 1382, 1398, 1539
CspCI CAANNNNNGTGG 4 cut(s) 375, 410, 1476, 1511
CviAII CATG 7 cut(s) 216, 337, 713, 762, 773, 1363, 1931
CviQI GTAC 8 cut(s) 365, 716, 733, 789, 1127, 1382, 1398, 1539
DdeI CTNAG 3 cut(s) 558, 1016, 1643
DpnI GATC 7 cut(s) 240, 331, 659, 746, 903, 1448, 1896
DpnII GATC 7 cut(s) 238, 329, 657, 744, 901, 1446, 1894
DraIII CACNNNGTG 1 cut(s) 1605
EaeI YGGCCR 2 cut(s) 143, 1737
Eam1104I CTCTTC 8 cut(s) 92, 324, 412, 442, 510, 605, 1508, 1582
EarI CTCTTC 8 cut(s) 92, 324, 412, 442, 510, 605, 1508, 1582
Eco130I CCWWGG 3 cut(s) 286, 614, 1740
Eco147I AGGCCT 1 cut(s) 103
Eco31I GGTCTC 1 cut(s) 1881
Eco47I GGWCC 3 cut(s) 340, 1527, 1675
Eco57I CTGAAG 1 cut(s) 1457
EcoNI CCTNNNNNAGG 1 cut(s) 290
EcoO109I RGGNCCY 2 cut(s) 176, 1003
EcoRII CCWGG 1 cut(s) 470
EcoT14I CCWWGG 3 cut(s) 286, 614, 1740
ErhI CCWWGG 3 cut(s) 286, 614, 1740
Esp3I CGTCTC 2 cut(s) 749, 840
FaeI CATG 7 cut(s) 219, 340, 716, 765, 776, 1366, 1934
FalI AAGNNNNNCTT 2 cut(s) 1626, 1658
FaqI GGGAC 1 cut(s) 1042
FatI CATG 7 cut(s) 215, 336, 712, 761, 772, 1362, 1930
FauI CCCGC 1 cut(s) 115
FauNDI CATATG 2 cut(s) 360, 1169
FbaI TGATCA 1 cut(s) 1894
FblI GTMKAC 1 cut(s) 1846
Fnu4HI GCNGC 3 cut(s) 315, 501, 1890
FokI GGATG 4 cut(s) 242, 467, 686, 1225
Fsp4HI GCNGC 3 cut(s) 315, 501, 1890
FspBI CTAG 3 cut(s) 708, 1196, 1218
GluI GCNGC 3 cut(s) 315, 501, 1890
HaeIII GGCC 6 cut(s) 103, 145, 178, 398, 1005, 1739
HgaI GACGC 2 cut(s) 1857, 1923
Hin1I GRCGYC 1 cut(s) 758
Hin1II CATG 7 cut(s) 219, 340, 716, 765, 776, 1366, 1934
HincII GTYRAC 2 cut(s) 963, 1847
HindII GTYRAC 2 cut(s) 963, 1847
HinfI GANTC 6 cut(s) 25, 46, 67, 373, 1201, 1471
HphI GGTGA 2 cut(s) 128, 1261
Hpy166II GTNNAC 2 cut(s) 963, 1847
Hpy188III TCNNGA 9 cut(s) 50, 71, 414, 1218, 1232, 1557, 1610, 1856, 1901
Hpy8I GTNNAC 2 cut(s) 963, 1847
Hpy99I CGWCG 2 cut(s) 1848, 1851
HpyAV CCTTC 7 cut(s) 113, 194, 540, 598, 602, 1688, 1858
HpyCH4III ACNGT 4 cut(s) 77, 1143, 1249, 1756
HpyCH4IV ACGT 7 cut(s) 638, 758, 1053, 1133, 1370, 1467, 1545
HpyF10VI GCNNNNNNNGC 1 cut(s) 1736
HpyF3I CTNAG 3 cut(s) 558, 1016, 1643
HpySE526I ACGT 7 cut(s) 638, 758, 1053, 1133, 1370, 1467, 1545
Hsp92I GRCGYC 1 cut(s) 758
Hsp92II CATG 7 cut(s) 219, 340, 716, 765, 776, 1366, 1934
Ksp22I TGATCA 1 cut(s) 1894
Kzo9I GATC 7 cut(s) 238, 329, 657, 744, 901, 1446, 1894
LguI GCTCTTC 3 cut(s) 324, 510, 1508
LmnI GCTCC 1 cut(s) 403
Lsp1109I GCAGC 3 cut(s) 326, 487, 1876
LweI GCATC 4 cut(s) 778, 934, 1282, 1488
MaeI CTAG 3 cut(s) 708, 1196, 1218
MaeII ACGT 7 cut(s) 638, 758, 1053, 1133, 1370, 1467, 1545
MaeIII GTNAC 6 cut(s) 352, 379, 805, 1019, 1049, 1759
MalI GATC 7 cut(s) 240, 331, 659, 746, 903, 1448, 1896
MboI GATC 7 cut(s) 238, 329, 657, 744, 901, 1446, 1894
MfeI CAATTG 1 cut(s) 1205
MflI RGATCY 2 cut(s) 238, 901
MlsI TGGCCA 2 cut(s) 145, 1739
MluNI TGGCCA 2 cut(s) 145, 1739
MmeI TCCRAC 1 cut(s) 772
Mox20I TGGCCA 2 cut(s) 145, 1739
MroXI GAANNNNTTC 2 cut(s) 1310, 1638
MscI TGGCCA 2 cut(s) 145, 1739
MseI TTAA 5 cut(s) 459, 684, 951, 1565, 1942
MslI CAYNNNNRTG 2 cut(s) 828, 1548
Msp20I TGGCCA 2 cut(s) 145, 1739
MspCI CTTAAG 1 cut(s) 950
MspR9I CCNGG 1 cut(s) 472
MunI CAATTG 1 cut(s) 1205
MvaI CCWGG 1 cut(s) 472
MwoI GCNNNNNNNGC 1 cut(s) 1736
NdeI CATATG 2 cut(s) 360, 1169
NdeII GATC 7 cut(s) 238, 329, 657, 744, 901, 1446, 1894
NlaIII CATG 7 cut(s) 219, 340, 716, 765, 776, 1366, 1934
NlaIV GGNNCC 3 cut(s) 177, 240, 1004
NmuCI GTSAC 3 cut(s) 379, 805, 1759
NspI RCATGY 2 cut(s) 219, 1934
PceI AGGCCT 1 cut(s) 103
PciSI GCTCTTC 3 cut(s) 324, 510, 1508
PcsI WCGNNNNNNNCGW 2 cut(s) 1840, 1852
PdmI GAANNNNTTC 2 cut(s) 1310, 1638
PfeI GAWTC 6 cut(s) 25, 46, 67, 373, 1201, 1471
PflMI CCANNNNNTGG 1 cut(s) 1180
PkrI GCNGC 3 cut(s) 316, 502, 1891
Ple19I CGATCG 1 cut(s) 332
Ppu21I YACGTR 2 cut(s) 1054, 1468
Psp6I CCWGG 1 cut(s) 470
PspGI CCWGG 1 cut(s) 470
PspN4I GGNNCC 3 cut(s) 177, 240, 1004
PspPI GGNCC 5 cut(s) 176, 340, 1003, 1527, 1675
PstI CTGCAG 1 cut(s) 316
PsuI RGATCY 2 cut(s) 238, 901
PvuI CGATCG 1 cut(s) 332
RsaI GTAC 8 cut(s) 366, 717, 734, 790, 1128, 1383, 1399, 1540
RsaNI GTAC 8 cut(s) 365, 716, 733, 789, 1127, 1382, 1398, 1539
RseI CAYNNNNRTG 2 cut(s) 828, 1548
SalI GTCGAC 1 cut(s) 1845
SapI GCTCTTC 3 cut(s) 324, 510, 1508
SaqAI TTAA 5 cut(s) 459, 684, 951, 1565, 1942
SatI GCNGC 3 cut(s) 315, 501, 1890
Sau3AI GATC 7 cut(s) 238, 329, 657, 744, 901, 1446, 1894
Sau96I GGNCC 5 cut(s) 176, 340, 1003, 1527, 1675
ScaI AGTACT 2 cut(s) 790, 1399
ScrFI CCNGG 1 cut(s) 472
SfaNI GCATC 4 cut(s) 778, 934, 1282, 1488
SfcI CTRYAG 1 cut(s) 312
SgrDI CGTCGACG 1 cut(s) 1845
SinI GGWCC 3 cut(s) 340, 1527, 1675
SmiMI CAYNNNNRTG 2 cut(s) 828, 1548
SmlI CTYRAG 2 cut(s) 950, 1610
SmoI CTYRAG 2 cut(s) 950, 1610
SseBI AGGCCT 1 cut(s) 103
SsiI CCGC 1 cut(s) 108
SspI AATATT 2 cut(s) 921, 936
SspMI CTAG 3 cut(s) 708, 1196, 1218
StuI AGGCCT 1 cut(s) 103
StyD4I CCNGG 1 cut(s) 470
StyI CCWWGG 3 cut(s) 286, 614, 1740
TaaI ACNGT 4 cut(s) 77, 1143, 1249, 1756
TaiI ACGT 7 cut(s) 641, 761, 1056, 1136, 1373, 1470, 1548
TaqI TCGA 8 cut(s) 625, 743, 1474, 1655, 1834, 1846, 1855, 1900
TatI WGTACW 4 cut(s) 715, 788, 1126, 1397
TfiI GAWTC 6 cut(s) 25, 46, 67, 373, 1201, 1471
Tru1I TTAA 5 cut(s) 459, 684, 951, 1565, 1942
Tru9I TTAA 5 cut(s) 459, 684, 951, 1565, 1942
TscAI CASTG 2 cut(s) 97, 1449
TseFI GTSAC 3 cut(s) 379, 805, 1759
TseI GCWGC 3 cut(s) 314, 500, 1889
Tsp45I GTSAC 3 cut(s) 379, 805, 1759
TspDTI ATGAA 8 cut(s) 17, 812, 1202, 1256, 1271, 1419, 1495, 1569
TspGWI ACGGA 1 cut(s) 1832
TspRI CASTG 2 cut(s) 97, 1449
Van91I CCANNNNNTGG 1 cut(s) 1180
Vha464I CTTAAG 1 cut(s) 950
VpaK11BI GGWCC 3 cut(s) 340, 1527, 1675
XagI CCTNNNNNAGG 1 cut(s) 290
XapI RAATTY 7 cut(s) 124, 159, 875, 887, 1033, 1650, 1766
XbaI TCTAGA 1 cut(s) 1217
XceI RCATGY 2 cut(s) 219, 1934
XmiI GTMKAC 1 cut(s) 1846
XmnI GAANNNNTTC 2 cut(s) 1310, 1638
XspI CTAG 3 cut(s) 708, 1196, 1218
ZraI GACGTC 1 cut(s) 759
ZrmI AGTACT 2 cut(s) 790, 1399
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.