RLG00000029876

Cyclic nucleotide-gated ion channel 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
OG0000119
Physical Location & Seq
Reverse (-)
50625552 .. 50630614
5063 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000029876

Sequence Viewer

Length: 1605 bp
ATGTTTGTACTTGCATGTGTGATTGCAGTCTCATTAGACCCGTTGTTCTTCTACATTCCAATGATCGATGAAGAAGAAAAGTGCCTTGCAGTAGACAAAGAGTTGAGGACTATAGCTCTCATTTTGCGATCCCTTACTGATGTCACTTTCGTAGTGAATATCATATATCATGTTTGCAAAGCCATTAACGCTGCCTACAAAGTACACAAAGGAAACAAGTCTGAATTGGTATCGGATTGGGAATTTTCGAAGGTATCAGCAGCAGAGATAATTCCATTTGCTAAATTAGTTGCCGGGAAGCTAGCATGGCGCTCTACGATAACCAGCATTTTAGCTGTTTTTCCCATGCCACAATTGCTTCTAGTATTTGTCTTCTTCAAAATGAGAGGCCATGGATACTTGGAGCGTAGAAAGATTTTGAATGTCTTTCTTCTCACGCAATATCTACTAAGGATCTATCGAATTTACCTATCATCTCAGAAACTCAGACAAACTACTGGAATATGGGCTAAAGCTCTATTTAATTTTTTTCTATATATCCTTGCAAGTCATATCCTTGGAGCTTTTTGGTACTTTTTTTCTATTCAACGAGAAACTTCCTGTTGGCATCGAGCATGTGTAAATAATAGTACAGATGTTGAAGGATGTATGAGTACCTTATATTGCGAGGTTCACAATACTGCTGCAAGAAATGCCACATTCCTTGTTCAATTTTGCCCTATAAGTGCTGAAGAGAATGCTAAAGCCCCTTTTGATTTTGGAATATTTCTGGATTCCCTCAAAAATGGTATCACAGGGGATATACATTTTGGAACGAAGTTATCTTACTGTTTTTGGTGGGGATTGCATGTGTTCAACTTGAATACACACATCATGATTTCCTTTATGGTGTTTTTCATATGTATAACATTTATGTCCATGGAAGCTCAAAGATGGGAGGACATAAGAAACAAGATACAATTGAAAGAGAGAGATATAGCAGGATGGATGGACAGAAATGAGCTCCCAGACGATATGAAGAAAGAAATTATGAAGAACATAAAGCAAAAACTGGAAGAGAACGAAGATGCTGATCTTGAGAATCTTTTCTCTATTCTTCCGATATATACCAAAAAGTGTCTAAAGCGTTTCCTCTGCATGAAAACGCTAAAGAAAGTACCAAAGCTTGAAAGGATGGATGAAATAGTGTTGAAAATGATGTGCGACTATCTAAAGCCAGTGATGTATGCCGAGGGCACCGTGGTTTTACAAATGGGAGATCCCCTGCATAGCATGCTACTCATTACAGAAGGCACATTATTGACCTACAGAACTACCAGTAATGATAGTCATGTTGTAGCTGAAAGCGCAAAAATGGGTAGTATTTCAAGTTCCCCGTCAGTTGGCAACCTTGACAAAGGTGACTTTTACGGCGCCGAAGAACTGATCGAGTGGGTAACACAAAAGAAGGATTTAGGCCAGCTTCCCGGCTCTACGTTCAATGTGAAATGCGATTCAAAAGTAGAAGGCTTTGTCCTCGTGGCCAAGGACTTGAAAAGTGTAGTTTCCAAATGCGAAAACTGGTGGAAAATTGGCATTAGCAAGTCAGACCACAGCATATGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
Ion_trans

Protein Analysis

535

Amino Acids

61.26

Weight (kDa)

8.2

Isoelectric Point (pI)

40.71

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000119)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g10570 FvH4_4g36390 FvH4_7g31840 FvH4_7g31840 FvH4_7g31850 FvH4_7g31850 FvH4_7g31861 FvH4_7g31861 FvH4_7g31950
malus_domestica MD01G1054600.v1.1 MD01G1221100.v1.1 MD01G1221400.v1.1 MD01G1221600.v1.1 MD01G1221800.v1.1 MD01G1222000.v1.1 MD01G1222100.v1.1 MD07G1140800.v1.1 MD07G1291200.v1.1 MD07G1291400.v1.1 MD07G1291500.v1.1 MD07G1291700.v1.1 MD07G1292500.v1.1 MD07G1292700.v1.1 MD07G1292800.v1.1 MD07G1292900.v1.1 MD08G1241600.v1.1 MD11G1083800.v1.1 MD15G1431600.v1.1
prunus_persica Prupe.1G017800_v2.0.a1 Prupe.1G017800_v2.0.a1 Prupe.1G162800_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312700_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G143000_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1
pyrus_communis pycom01g23050 pycom01g23070 pycom01g23090 pycom01g23100 pycom01g23110 pycom01g23120 pycom01g23170 pycom07g26410 pycom07g26440 pycom07g26470 pycom07g26480 pycom07g26490 pycom07g26500 pycom07g26510 pycom07g26530 pycom07g26540 pycom07g26570 pycom07g26580 pycom07g26590 pycom08g20940
rosa_chinensis RchiOBHm_Chr1g0324571 RchiOBHm_Chr1g0336181 RchiOBHm_Chr1g0381061 RchiOBHm_Chr1g0381091 RchiOBHm_Chr1g0381121 RchiOBHm_Chr1g0381131 RchiOBHm_Chr1g0381141 RchiOBHm_Chr1g0381161 RchiOBHm_Chr1g0381211 RchiOBHm_Chr2g0110361 RchiOBHm_Chr2g0120231 RchiOBHm_Chr3g0486281 RchiOBHm_Chr3g0486311 RchiOBHm_Chr3g0486401 RchiOBHm_Chr4g0409511 RchiOBHm_Chr4g0409521 RchiOBHm_Chr5g0017271 RchiOBHm_Chr5g0048781 RchiOBHm_Chr5g0048811
rosa_laevigata RLG00000002401 RLG00000008559 RLG00000017798 RLG00000017799 RLG00000023082 RLG00000023088 RLG00000026230 RLG00000026238 RLG00000026240 RLG00000026241 RLG00000026242 RLG00000026243 RLG00000026244 RLG00000026246 RLG00000026247 RLG00000026248 RLG00000029876 RLG00000030189 RLG00000034579
rosa_multiflora Rmu_co8101374.1_g000001 Rmu_co8309149.1_g000001 Rmu_co8450063.1_g000001 Rmu_sc0000441.1_g000094 Rmu_sc0000479.1_g000005 Rmu_sc0000647.1_g000006 Rmu_sc0001393.1_g000031 Rmu_sc0001423.1_g000037 Rmu_sc0001616.1_g000015 Rmu_sc0001857.1_g000011 Rmu_sc0002183.1_g000013 Rmu_sc0002183.1_g000028 Rmu_sc0002183.1_g000030 Rmu_sc0002688.1_g000003 Rmu_sc0002688.1_g000020 Rmu_sc0003801.1_g000003 Rmu_sc0003801.1_g000004 Rmu_sc0004125.1_g000006 Rmu_sc0004494.1_g000005 Rmu_sc0004494.1_g000006 Rmu_sc0004494.1_g000008 Rmu_sc0004494.1_g000009 Rmu_sc0005842.1_g000004 Rmu_sc0006872.1_g000001 Rmu_sc0006872.1_g000005 Rmu_sc0006872.1_g000009 Rmu_sc0006872.1_g000010 Rmu_sc0008053.1_g000026
rosa_roxburghii Rroxscaffold_159G00432960 Rroxscaffold_1G00033060 Rroxscaffold_2G00123150 Rroxscaffold_2G00123170 Rroxscaffold_2G00133500 Rroxscaffold_2G00133550 Rroxscaffold_4G00278650 Rroxscaffold_4G00278750 Rroxscaffold_4G00278790 Rroxscaffold_4G00278800 Rroxscaffold_4G00278810 Rroxscaffold_4G00325390 Rroxscaffold_5G00354010 Rroxscaffold_6G00395890 Rroxscaffold_6G00395900 Rroxscaffold_6G00395920
rosa_rugosa Rorug01G0046900.1 Rorug01G0427000 Rorug01G0427100 Rorug01G0427200 Rorug01G0427300 Rorug01G0427400 Rorug01G0427500 Rorug01G0427500 Rorug01G0427600 Rorug01G0427600 Rorug01G0427700 Rorug01G0427700 Rorug01G0427800 Rorug01G0428700 Rorug02G0166400 Rorug02G0166500 Rorug02G0166500 Rorug02G0166600 Rorug02G0166600 Rorug02G0166700 Rorug02G0167300 Rorug02G0167300 Rorug02G0167300 Rorug03G0224600 Rorug03G0224600 Rorug04G0094400 Rorug05G0241100 Rorug05G0241200
rosa_samantha Rh1BG407700 Rh1BG407900 Rh1BG409000 Rh1CG064700 Rh1CG420900 Rh1CG421000 Rh1CG421200 Rh1CG421300 Rh1CG421800 Rh1CG421900 Rh1CG422000 Rh1CG422200 Rh1CG422300 Rh1CG423600 Rh1DG437600 Rh1DG438900 Rh1DG439000 Rh1DG440300 Rh2AG219100 Rh2CG220700 Rh2DG225300 Rh3AG274400 Rh3AG274600 Rh3CG308900 Rh3DG305800 Rh4AG156400 Rh5AG129000 Rh5AG320900 Rh5CG139600
rosa_wichuraiana Rw1G005300 Rw1G039280 Rw1G039300 Rw1G039310 Rw1G039320 Rw1G039330 Rw1G039340 Rw1G039360 Rw1G039390 Rw2G016910 Rw2G022800 Rw3G024330 Rw3G024340 Rw3G024350 Rw3G024400 Rw4G012810 Rw5G030120 Rw5G030280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 1235, 1412
AccI GTMKAC 1 cut(s) 93
AclWI GGATC 3 cut(s) 123, 461, 1253
AcoI YGGCCR 1 cut(s) 1521
AcsI RAATTY 2 cut(s) 242, 462
AcuI CTGAAG 1 cut(s) 750
AcyI GRCGYC 1 cut(s) 1413
AfaI GTAC 6 cut(s) 9, 204, 572, 631, 655, 1158
AfiI CCNNNNNNNGG 1 cut(s) 1382
Alw21I GWGCWC 1 cut(s) 1005
Alw26I GTCTC 1 cut(s) 34
AlwI GGATC 3 cut(s) 123, 461, 1253
AoxI GGCC 3 cut(s) 388, 1456, 1521
ApeKI GCWGC 3 cut(s) 191, 260, 683
ApoI RAATTY 2 cut(s) 242, 462
Asp700I GAANNNNTTC 1 cut(s) 1085
AspLEI GCGC 3 cut(s) 312, 1349, 1415
AsuC2I CCSGG 2 cut(s) 295, 1467
AsuHPI GGTGA 1 cut(s) 1412
AsuII TTCGAA 1 cut(s) 248
AsuNHI GCTAGC 1 cut(s) 301
BaeGI GKGCMC 1 cut(s) 1238
BalI TGGCCA 1 cut(s) 1523
BanI GGYRCC 2 cut(s) 1235, 1412
BanII GRGCYC 1 cut(s) 1005
BarI GAAGNNNNNNTAC 2 cut(s) 809, 841
BauI CACGAG 1 cut(s) 1517
BbsI GAAGAC 1 cut(s) 364
Bbv12I GWGCWC 1 cut(s) 1005
BbvI GCAGC 3 cut(s) 178, 272, 670
BccI CCATC 4 cut(s) 927, 978, 982, 1168
BceAI ACGGC 1 cut(s) 1426
BciVI GTATCC 1 cut(s) 389
BcnI CCSGG 2 cut(s) 295, 1467
BcoDI GTCTC 1 cut(s) 34
BfaI CTAG 3 cut(s) 302, 362, 1603
BfmI CTRYAG 2 cut(s) 111, 1306
BfoI RGCGCY 2 cut(s) 313, 1416
BfuI GTATCC 1 cut(s) 389
BisI GCNGC 3 cut(s) 192, 261, 684
BlsI GCNGC 3 cut(s) 193, 262, 685
Bme1390I CCNGG 2 cut(s) 295, 1467
BmiI GGNNCC 2 cut(s) 1237, 1414
BmrFI CCNGG 2 cut(s) 295, 1467
BmsI GCATC 2 cut(s) 616, 1057
BmtI GCTAGC 1 cut(s) 305
BpiI GAAGAC 1 cut(s) 364
Bpu14I TTCGAA 1 cut(s) 248
BpuEI CTTGAG 1 cut(s) 1097
BpuMI CCSGG 2 cut(s) 295, 1467
Bsa29I ATCGAT 1 cut(s) 66
BsaBI GATNNNNATC 1 cut(s) 1071
BsaHI GRCGYC 1 cut(s) 1413
BsaJI CCNNGG 6 cut(s) 391, 556, 918, 1230, 1239, 1524
Bsc4I CCNNNNNNNGG 1 cut(s) 1382
Bse1I ACTGG 5 cut(s) 502, 1056, 1217, 1317, 1565
Bse8I GATNNNNATC 1 cut(s) 1071
BseCI ATCGAT 1 cut(s) 66
BseDI CCNNGG 6 cut(s) 391, 556, 918, 1230, 1239, 1524
BseGI GGATG 5 cut(s) 650, 989, 993, 1179, 1183
BseJI GATNNNNATC 1 cut(s) 1071
BseLI CCNNNNNNNGG 1 cut(s) 1382
BseMII CTCAG 2 cut(s) 491, 499
BseNI ACTGG 5 cut(s) 502, 1056, 1217, 1317, 1565
BseSI GKGCMC 1 cut(s) 1238
BseXI GCAGC 3 cut(s) 178, 272, 670
BshFI GGCC 3 cut(s) 390, 1458, 1523
BshNI GGYRCC 2 cut(s) 1235, 1412
BshVI ATCGAT 1 cut(s) 66
BsiHKAI GWGCWC 1 cut(s) 1005
BsiSI CCGG 2 cut(s) 294, 1467
BslI CCNNNNNNNGG 1 cut(s) 1382
BsmAI GTCTC 1 cut(s) 34
BsmI GAATGC 1 cut(s) 742
BsnI GGCC 3 cut(s) 390, 1458, 1523
Bsp119I TTCGAA 1 cut(s) 248
Bsp1286I GDGCHC 2 cut(s) 1005, 1238
Bsp143I GATC 6 cut(s) 63, 128, 453, 1072, 1258, 1425
Bsp19I CCATGG 2 cut(s) 391, 918
BspANI GGCC 3 cut(s) 390, 1458, 1523
BspCNI CTCAG 2 cut(s) 490, 498
BspDI ATCGAT 1 cut(s) 66
BspHI TCATGA 1 cut(s) 873
BspLI GGNNCC 2 cut(s) 1237, 1414
BspOI GCTAGC 1 cut(s) 305
BspPI GGATC 3 cut(s) 123, 461, 1253
BspT104I TTCGAA 1 cut(s) 248
BspT107I GGYRCC 2 cut(s) 1235, 1412
BsrI ACTGG 5 cut(s) 502, 1056, 1217, 1317, 1565
BssECI CCNNGG 6 cut(s) 391, 556, 918, 1230, 1239, 1524
BssMI GATC 6 cut(s) 63, 128, 453, 1072, 1258, 1425
BssNI GRCGYC 1 cut(s) 1413
BssSI CACGAG 1 cut(s) 1517
BssT1I CCWWGG 4 cut(s) 391, 556, 918, 1524
Bst2BI CACGAG 1 cut(s) 1517
Bst4CI ACNGT 2 cut(s) 830, 1240
Bst6I CTCTTC 2 cut(s) 726, 1050
BstACI GRCGYC 1 cut(s) 1413
BstAPI GCANNNNNTGC 2 cut(s) 692, 1273
BstBI TTCGAA 1 cut(s) 248
BstC8I GCNNGC 3 cut(s) 303, 1274, 1460
BstDEI CTNAG 3 cut(s) 449, 477, 485
BstDSI CCRYGG 3 cut(s) 391, 918, 1239
BstF5I GGATG 5 cut(s) 650, 989, 993, 1179, 1183
BstH2I RGCGCY 2 cut(s) 313, 1416
BstHHI GCGC 3 cut(s) 312, 1349, 1415
BstKTI GATC 6 cut(s) 66, 131, 456, 1075, 1261, 1428
BstMAI GTCTC 1 cut(s) 34
BstMBI GATC 6 cut(s) 63, 128, 453, 1072, 1258, 1425
BstMWI GCNNNNNNNGC 6 cut(s) 188, 307, 355, 692, 1273, 1346
BstNSI RCATGY 4 cut(s) 18, 618, 851, 1276
BstSCI CCNGG 2 cut(s) 293, 1465
BstSFI CTRYAG 2 cut(s) 111, 1306
BstSLI GKGCMC 1 cut(s) 1238
BstV1I GCAGC 3 cut(s) 178, 272, 670
BstV2I GAAGAC 1 cut(s) 364
BstX2I RGATCY 2 cut(s) 453, 1258
BstYI RGATCY 2 cut(s) 453, 1258
Bsu15I ATCGAT 1 cut(s) 66
BsuI GTATCC 1 cut(s) 389
BsuRI GGCC 3 cut(s) 390, 1458, 1523
BsuTUI ATCGAT 1 cut(s) 66
BtgI CCRYGG 3 cut(s) 391, 918, 1239
BtsCI GGATG 5 cut(s) 650, 989, 993, 1179, 1183
BtsIMutI CAGTG 1 cut(s) 1224
Cac8I GCNNGC 3 cut(s) 303, 1274, 1460
CciI TCATGA 1 cut(s) 873
CfoI GCGC 3 cut(s) 312, 1349, 1415
ClaI ATCGAT 1 cut(s) 66
Csp6I GTAC 6 cut(s) 8, 203, 571, 630, 654, 1157
CspCI CAANNNNNGTGG 2 cut(s) 685, 720
CviQI GTAC 6 cut(s) 8, 203, 571, 630, 654, 1157
DdeI CTNAG 3 cut(s) 449, 477, 485
DinI GGCGCC 1 cut(s) 1414
DpnI GATC 6 cut(s) 65, 130, 455, 1074, 1260, 1427
DpnII GATC 6 cut(s) 63, 128, 453, 1072, 1258, 1425
EaeI YGGCCR 1 cut(s) 1521
Eam1104I CTCTTC 2 cut(s) 726, 1050
EarI CTCTTC 2 cut(s) 726, 1050
Ecl136II GAGCTC 1 cut(s) 1003
Eco130I CCWWGG 4 cut(s) 391, 556, 918, 1524
Eco24I GRGCYC 1 cut(s) 1005
Eco53kI GAGCTC 1 cut(s) 1003
Eco57I CTGAAG 1 cut(s) 750
EcoICRI GAGCTC 1 cut(s) 1003
EcoT14I CCWWGG 4 cut(s) 391, 556, 918, 1524
EcoT38I GRGCYC 1 cut(s) 1005
EgeI GGCGCC 1 cut(s) 1414
EheI GGCGCC 1 cut(s) 1414
ErhI CCWWGG 4 cut(s) 391, 556, 918, 1524
FauNDI CATATG 2 cut(s) 899, 1598
FblI GTMKAC 1 cut(s) 93
Fnu4HI GCNGC 3 cut(s) 192, 261, 684
FokI GGATG 5 cut(s) 657, 996, 1000, 1186, 1190
FriOI GRGCYC 1 cut(s) 1005
Fsp4HI GCNGC 3 cut(s) 192, 261, 684
FspBI CTAG 3 cut(s) 302, 362, 1603
GlaI GCGC 3 cut(s) 311, 1348, 1414
GluI GCNGC 3 cut(s) 192, 261, 684
HaeII RGCGCY 2 cut(s) 313, 1416
HaeIII GGCC 3 cut(s) 390, 1458, 1523
HapII CCGG 2 cut(s) 294, 1467
HhaI GCGC 3 cut(s) 312, 1349, 1415
Hin1I GRCGYC 1 cut(s) 1413
Hin6I GCGC 3 cut(s) 310, 1347, 1413
HinP1I GCGC 3 cut(s) 310, 1347, 1413
HindIII AAGCTT 1 cut(s) 1163
HinfI GANTC 3 cut(s) 773, 1081, 1493
HpaII CCGG 2 cut(s) 294, 1467
HphI GGTGA 1 cut(s) 1412
Hpy166II GTNNAC 3 cut(s) 94, 205, 673
Hpy188I TCNGA 6 cut(s) 223, 235, 480, 488, 1101, 1588
Hpy188III TCNNGA 3 cut(s) 770, 874, 1076
Hpy8I GTNNAC 3 cut(s) 94, 205, 673
HpyAV CCTTC 5 cut(s) 244, 635, 1283, 1441, 1499
HpyCH4III ACNGT 2 cut(s) 830, 1240
HpyCH4IV ACGT 1 cut(s) 1475
HpyCH4V TGCA 9 cut(s) 14, 26, 89, 177, 545, 686, 847, 1137, 1267
HpyF10VI GCNNNNNNNGC 6 cut(s) 188, 307, 355, 692, 1273, 1346
HpyF3I CTNAG 3 cut(s) 449, 477, 485
HpySE526I ACGT 1 cut(s) 1475
Hsp92I GRCGYC 1 cut(s) 1413
HspAI GCGC 3 cut(s) 310, 1347, 1413
KasI GGCGCC 1 cut(s) 1412
Kzo9I GATC 6 cut(s) 63, 128, 453, 1072, 1258, 1425
LmnI GCTCC 3 cut(s) 403, 560, 1008
Lsp1109I GCAGC 3 cut(s) 178, 272, 670
LweI GCATC 2 cut(s) 616, 1057
MaeI CTAG 3 cut(s) 302, 362, 1603
MaeII ACGT 1 cut(s) 1475
MaeIII GTNAC 3 cut(s) 142, 1400, 1435
MalI GATC 6 cut(s) 65, 130, 455, 1074, 1260, 1427
MboI GATC 6 cut(s) 63, 128, 453, 1072, 1258, 1425
MfeI CAATTG 2 cut(s) 353, 959
MflI RGATCY 2 cut(s) 453, 1258
MhlI GDGCHC 2 cut(s) 1005, 1238
MlsI TGGCCA 1 cut(s) 1523
MluNI TGGCCA 1 cut(s) 1523
Mly113I GGCGCC 1 cut(s) 1413
MnlI CCTC 8 cut(s) 99, 380, 661, 788, 931, 1142, 1225, 1526
Mox20I TGGCCA 1 cut(s) 1523
MroXI GAANNNNTTC 1 cut(s) 1085
MscI TGGCCA 1 cut(s) 1523
MseI TTAA 2 cut(s) 186, 522
MslI CAYNNNNRTG 1 cut(s) 59
Msp20I TGGCCA 1 cut(s) 1523
MspI CCGG 2 cut(s) 294, 1467
MspR9I CCNGG 2 cut(s) 295, 1467
MunI CAATTG 2 cut(s) 353, 959
Mva1269I GAATGC 1 cut(s) 742
MwoI GCNNNNNNNGC 6 cut(s) 188, 307, 355, 692, 1273, 1346
NarI GGCGCC 1 cut(s) 1413
NciI CCSGG 2 cut(s) 295, 1467
NcoI CCATGG 2 cut(s) 391, 918
NdeI CATATG 2 cut(s) 899, 1598
NdeII GATC 6 cut(s) 63, 128, 453, 1072, 1258, 1425
NheI GCTAGC 1 cut(s) 301
NlaIV GGNNCC 2 cut(s) 1237, 1414
NmeAIII GCCGAG 1 cut(s) 1255
NmuCI GTSAC 2 cut(s) 142, 1400
NspI RCATGY 4 cut(s) 18, 618, 851, 1276
NspV TTCGAA 1 cut(s) 248
PaeI GCATGC 1 cut(s) 1276
PagI TCATGA 1 cut(s) 873
PctI GAATGC 1 cut(s) 742
PdmI GAANNNNTTC 1 cut(s) 1085
PfeI GAWTC 3 cut(s) 773, 1081, 1493
PkrI GCNGC 3 cut(s) 193, 262, 685
PluTI GGCGCC 1 cut(s) 1416
Psp124BI GAGCTC 1 cut(s) 1005
PspN4I GGNNCC 2 cut(s) 1237, 1414
PsrI GAACNNNNNNTAC 2 cut(s) 1354, 1386
PsuI RGATCY 2 cut(s) 453, 1258
RsaI GTAC 6 cut(s) 9, 204, 572, 631, 655, 1158
RsaNI GTAC 6 cut(s) 8, 203, 571, 630, 654, 1157
RseI CAYNNNNRTG 1 cut(s) 59
SacI GAGCTC 1 cut(s) 1005
SaqAI TTAA 2 cut(s) 186, 522
SatI GCNGC 3 cut(s) 192, 261, 684
Sau3AI GATC 6 cut(s) 63, 128, 453, 1072, 1258, 1425
ScrFI CCNGG 2 cut(s) 295, 1467
SduI GDGCHC 2 cut(s) 1005, 1238
SfaNI GCATC 2 cut(s) 616, 1057
SfcI CTRYAG 2 cut(s) 111, 1306
SfoI GGCGCC 1 cut(s) 1414
SfuI TTCGAA 1 cut(s) 248
SmiMI CAYNNNNRTG 1 cut(s) 59
SmlI CTYRAG 1 cut(s) 1076
SmoI CTYRAG 1 cut(s) 1076
SphI GCATGC 1 cut(s) 1276
SspDI GGCGCC 1 cut(s) 1412
SspI AATATT 1 cut(s) 765
SspMI CTAG 3 cut(s) 302, 362, 1603
SstI GAGCTC 1 cut(s) 1005
StyD4I CCNGG 2 cut(s) 293, 1465
StyI CCWWGG 4 cut(s) 391, 556, 918, 1524
TaaI ACNGT 2 cut(s) 830, 1240
TaiI ACGT 1 cut(s) 1478
TaqI TCGA 5 cut(s) 66, 248, 460, 610, 1428
TatI WGTACW 3 cut(s) 7, 202, 629
TfiI GAWTC 3 cut(s) 773, 1081, 1493
Tru1I TTAA 2 cut(s) 186, 522
Tru9I TTAA 2 cut(s) 186, 522
TscAI CASTG 1 cut(s) 1224
TseFI GTSAC 2 cut(s) 142, 1400
TseI GCWGC 3 cut(s) 191, 260, 683
Tsp45I GTSAC 2 cut(s) 142, 1400
TspDTI ATGAA 6 cut(s) 84, 886, 1031, 1046, 1154, 1194
TspRI CASTG 1 cut(s) 1224
XapI RAATTY 2 cut(s) 242, 462
XceI RCATGY 4 cut(s) 18, 618, 851, 1276
XmiI GTMKAC 1 cut(s) 93
XmnI GAANNNNTTC 1 cut(s) 1085
XspI CTAG 3 cut(s) 302, 362, 1603
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.