RchiOBHm_Chr1g0381161

Cyclic nucleotide-gated ion channel 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0000119
Physical Location & Seq
Reverse (-)
66515173 .. 66517959
2787 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ60436

Sequence Viewer

Length: 1590 bp
ATGGGAATCGATAAACAAGTGCGGACTGCAGCTCTGGTTTTCCGATCAGTCACGGACATCACTTTCCTAGTGCATATCATATACCAACTTCGTGAAGCTATCAAATTTGCAGCTTCAAAGGTTCCAAGGGATACAAATTCAAAAAATTGGGAATGGGAATCGGTATCCCGAGCTCAGATGATTAAGTTTGCGAAGGAATTTTCTCGCAAATTGTCATGGCGCTCTTTCCTAACTGATGTTTTCGCTATTTTCCCCATGCCACAACTGCTAATAGTAGGGTTCTTTTTCGAAATGGGAGGCAGTAACTATTTGGAGAGAAGAAAGATTCTGAGTGGTTTTGTTCTAATCCAATATGTGCCAAGAATTTATCGAATTTATCTATCGTATACCGCGGTTACACATTCCGCATTATGGGTTAAAGGTGCATTCAATTTTTTTCTCTACATCCTTGCCAGTCATACATCATGTTGGTACCGAAGTTGCATTGAGGCAAATCCAAGATCAGGATGCACTTTTTATTGCCATGACAAAACTCCAATTGTAACCGAAGGATTCAATAAAACTACTCTAGGAGATCTTTGCCTTTTAAAAGTTCCACATAATATGTTGGAACCACCATTTGATTTTGGAATATTTTTTGATGCCCTCAAAAATGATATCCAGGGGCCAATAAATTTTCCAACAAAGATTGGTTTCTGCTTTTGGTGGGGCTTGCGAAATTTAAGTTCTTTTGGCACAAGTTTGGAAACAAGTACCTATCTGTGGGAAAACACCTTTGCAATTCTTATTTCTATCATCGGCTTGCTATTGTTTCTATATCTCATTGGAAATGTTCAGTTATATATGGCGAAGGCAATTACAAGAGCGGAAGAGGTAAGAGAGAAAATTCAGACCAAAAAGAACGATATAGAAAAGTGGATGGAAAATAATGACCTCCAAGATGACATGAAGGAAGAGATCATGAAAAACATCAAGAAAAAATTGGAAGAGGACATAAATGCCGATCTGGAGAATCTATTCTCTGTTCTTCCCTGGTATACCAAGAAAGCTCTAAAGCGCGTTCTTTGCATGAGTGCGCTAAGAAAAGTACCAATGCTTAGCCAGATGGATGAAAAAGTTTTGAAAATGATGTGCGACTATCTGAAGCCGGTGAATTACCCAGAGAATACCTTGGTTTTTCAGATGGGAGAACCATTTGATCGAATGGTCTTCATTACAGAAGGGCTTATGTGGACTTACACGACTGCTACTGAGAGTAGTCATTATGGAAAAGCAACAAAACCGGCTACTTCTCCATCCATGGATACCAACTTCCTCAAGAAGGGTGATTCTTATGGACACGCGCTTCTGCAGTTTGCATCATCATCTCTTGCGGCACTCCCTACCTCGAACGCAAATGTCCGGTGTCACACAAGGGTTGAAGCGTTTGTTCTCATGGCCAAGGACTTGAAAAACATAGTAACTAAATGCGAACATTTGTGGCCTTTCGACTACAATGCTTCTAAAGATGAGGCGGCGGATAAGGTGGCACCACTGGGGCAGTTGCCAAAGAAGTGTGTATCAACATCGACCACTGGCAACCGTGGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
Ion_trans cNMP_binding

Protein Analysis

529

Amino Acids

60.7

Weight (kDa)

8.94

Isoelectric Point (pI)

39.47

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000119)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g10570 FvH4_4g36390 FvH4_7g31840 FvH4_7g31840 FvH4_7g31850 FvH4_7g31850 FvH4_7g31861 FvH4_7g31861 FvH4_7g31950
malus_domestica MD01G1054600.v1.1 MD01G1221100.v1.1 MD01G1221400.v1.1 MD01G1221600.v1.1 MD01G1221800.v1.1 MD01G1222000.v1.1 MD01G1222100.v1.1 MD07G1140800.v1.1 MD07G1291200.v1.1 MD07G1291400.v1.1 MD07G1291500.v1.1 MD07G1291700.v1.1 MD07G1292500.v1.1 MD07G1292700.v1.1 MD07G1292800.v1.1 MD07G1292900.v1.1 MD08G1241600.v1.1 MD11G1083800.v1.1 MD15G1431600.v1.1
prunus_persica Prupe.1G017800_v2.0.a1 Prupe.1G017800_v2.0.a1 Prupe.1G162800_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312700_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G143000_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1
pyrus_communis pycom01g23050 pycom01g23070 pycom01g23090 pycom01g23100 pycom01g23110 pycom01g23120 pycom01g23170 pycom07g26410 pycom07g26440 pycom07g26470 pycom07g26480 pycom07g26490 pycom07g26500 pycom07g26510 pycom07g26530 pycom07g26540 pycom07g26570 pycom07g26580 pycom07g26590 pycom08g20940
rosa_chinensis RchiOBHm_Chr1g0324571 RchiOBHm_Chr1g0336181 RchiOBHm_Chr1g0381061 RchiOBHm_Chr1g0381091 RchiOBHm_Chr1g0381121 RchiOBHm_Chr1g0381131 RchiOBHm_Chr1g0381141 RchiOBHm_Chr1g0381161 RchiOBHm_Chr1g0381211 RchiOBHm_Chr2g0110361 RchiOBHm_Chr2g0120231 RchiOBHm_Chr3g0486281 RchiOBHm_Chr3g0486311 RchiOBHm_Chr3g0486401 RchiOBHm_Chr4g0409511 RchiOBHm_Chr4g0409521 RchiOBHm_Chr5g0017271 RchiOBHm_Chr5g0048781 RchiOBHm_Chr5g0048811
rosa_laevigata RLG00000002401 RLG00000008559 RLG00000017798 RLG00000017799 RLG00000023082 RLG00000023088 RLG00000026230 RLG00000026238 RLG00000026240 RLG00000026241 RLG00000026242 RLG00000026243 RLG00000026244 RLG00000026246 RLG00000026247 RLG00000026248 RLG00000029876 RLG00000030189 RLG00000034579
rosa_multiflora Rmu_co8101374.1_g000001 Rmu_co8309149.1_g000001 Rmu_co8450063.1_g000001 Rmu_sc0000441.1_g000094 Rmu_sc0000479.1_g000005 Rmu_sc0000647.1_g000006 Rmu_sc0001393.1_g000031 Rmu_sc0001423.1_g000037 Rmu_sc0001616.1_g000015 Rmu_sc0001857.1_g000011 Rmu_sc0002183.1_g000013 Rmu_sc0002183.1_g000028 Rmu_sc0002183.1_g000030 Rmu_sc0002688.1_g000003 Rmu_sc0002688.1_g000020 Rmu_sc0003801.1_g000003 Rmu_sc0003801.1_g000004 Rmu_sc0004125.1_g000006 Rmu_sc0004494.1_g000005 Rmu_sc0004494.1_g000006 Rmu_sc0004494.1_g000008 Rmu_sc0004494.1_g000009 Rmu_sc0005842.1_g000004 Rmu_sc0006872.1_g000001 Rmu_sc0006872.1_g000005 Rmu_sc0006872.1_g000009 Rmu_sc0006872.1_g000010 Rmu_sc0008053.1_g000026
rosa_roxburghii Rroxscaffold_159G00432960 Rroxscaffold_1G00033060 Rroxscaffold_2G00123150 Rroxscaffold_2G00123170 Rroxscaffold_2G00133500 Rroxscaffold_2G00133550 Rroxscaffold_4G00278650 Rroxscaffold_4G00278750 Rroxscaffold_4G00278790 Rroxscaffold_4G00278800 Rroxscaffold_4G00278810 Rroxscaffold_4G00325390 Rroxscaffold_5G00354010 Rroxscaffold_6G00395890 Rroxscaffold_6G00395900 Rroxscaffold_6G00395920
rosa_rugosa Rorug01G0046900.1 Rorug01G0427000 Rorug01G0427100 Rorug01G0427200 Rorug01G0427300 Rorug01G0427400 Rorug01G0427500 Rorug01G0427500 Rorug01G0427600 Rorug01G0427600 Rorug01G0427700 Rorug01G0427700 Rorug01G0427800 Rorug01G0428700 Rorug02G0166400 Rorug02G0166500 Rorug02G0166500 Rorug02G0166600 Rorug02G0166600 Rorug02G0166700 Rorug02G0167300 Rorug02G0167300 Rorug02G0167300 Rorug03G0224600 Rorug03G0224600 Rorug04G0094400 Rorug05G0241100 Rorug05G0241200
rosa_samantha Rh1BG407700 Rh1BG407900 Rh1BG409000 Rh1CG064700 Rh1CG420900 Rh1CG421000 Rh1CG421200 Rh1CG421300 Rh1CG421800 Rh1CG421900 Rh1CG422000 Rh1CG422200 Rh1CG422300 Rh1CG423600 Rh1DG437600 Rh1DG438900 Rh1DG439000 Rh1DG440300 Rh2AG219100 Rh2CG220700 Rh2DG225300 Rh3AG274400 Rh3AG274600 Rh3CG308900 Rh3DG305800 Rh4AG156400 Rh5AG129000 Rh5AG320900 Rh5CG139600
rosa_wichuraiana Rw1G005300 Rw1G039280 Rw1G039300 Rw1G039310 Rw1G039320 Rw1G039330 Rw1G039340 Rw1G039360 Rw1G039390 Rw2G016910 Rw2G022800 Rw3G024330 Rw3G024340 Rw3G024350 Rw3G024400 Rw4G012810 Rw5G030120 Rw5G030280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 471
AccB1I GGYRCC 2 cut(s) 471, 1528
AccBSI CCGCTC 1 cut(s) 866
AccI GTMKAC 2 cut(s) 386, 1037
AccII CGCG 3 cut(s) 392, 1059, 1343
AciI CCGC 8 cut(s) 22, 390, 392, 405, 866, 1373, 1514, 1517
AcoI YGGCCR 1 cut(s) 1437
AcsI RAATTY 8 cut(s) 104, 136, 197, 363, 372, 673, 718, 885
AcuI CTGAAG 1 cut(s) 1163
AfaI GTAC 3 cut(s) 473, 754, 1089
AfiI CCNNNNNNNGG 4 cut(s) 411, 503, 762, 1321
AgsI TTSAA 7 cut(s) 117, 141, 430, 556, 1123, 1421, 1450
AjnI CCWGG 2 cut(s) 660, 1031
AluBI AGCT 5 cut(s) 32, 98, 113, 173, 1049
AluI AGCT 5 cut(s) 32, 98, 113, 173, 1049
Alw21I GWGCWC 1 cut(s) 175
Ama87I CYCGRG 1 cut(s) 168
AoxI GGCC 3 cut(s) 665, 1437, 1481
ApeKI GCWGC 2 cut(s) 29, 110
ApoI RAATTY 8 cut(s) 104, 136, 197, 363, 372, 673, 718, 885
Asp700I GAANNNNTTC 1 cut(s) 1016
Asp718I GGTACC 1 cut(s) 471
AspLEI GCGC 4 cut(s) 222, 1059, 1078, 1345
AspS9I GGNCC 1 cut(s) 665
AsuHPI GGTGA 2 cut(s) 1162, 1337
AsuII TTCGAA 1 cut(s) 288
AvaI CYCGRG 1 cut(s) 168
BaeI ACNNNNGTAYC 2 cut(s) 463, 496
BalI TGGCCA 1 cut(s) 1439
BanI GGYRCC 2 cut(s) 471, 1528
BanII GRGCYC 1 cut(s) 175
BbsI GAAGAC 1 cut(s) 1201
Bbv12I GWGCWC 1 cut(s) 175
BbvI GCAGC 2 cut(s) 41, 122
BccI CCATC 4 cut(s) 913, 1099, 1177, 1303
BcgI CGANNNNNNTGC 2 cut(s) 1478, 1512
BciT130I CCWGG 2 cut(s) 662, 1033
BciVI GTATCC 3 cut(s) 124, 175, 1297
BfaI CTAG 2 cut(s) 68, 569
BfmI CTRYAG 2 cut(s) 27, 1349
BfoI RGCGCY 1 cut(s) 223
BfuI GTATCC 3 cut(s) 124, 175, 1297
BglII AGATCT 1 cut(s) 574
BisI GCNGC 4 cut(s) 30, 111, 1374, 1515
BlpI GCTNAGC 1 cut(s) 1097
BlsI GCNGC 4 cut(s) 31, 112, 1375, 1516
Bme1390I CCNGG 2 cut(s) 662, 1033
BmeT110I CYCGRG 1 cut(s) 168
BmgT120I GGNCC 1 cut(s) 665
BmiI GGNNCC 5 cut(s) 123, 473, 612, 666, 1530
BmrFI CCNGG 2 cut(s) 662, 1033
BmrI ACTGGG 1 cut(s) 1544
BmsI GCATC 3 cut(s) 497, 631, 1367
BmuI ACTGGG 1 cut(s) 1544
BpiI GAAGAC 1 cut(s) 1201
BpmI CTGGAG 1 cut(s) 1028
Bpu1102I GCTNAGC 1 cut(s) 1097
Bpu14I TTCGAA 1 cut(s) 288
BpuEI CTTGAG 1 cut(s) 1301
Bsa29I ATCGAT 1 cut(s) 9
BsaJI CCNNGG 8 cut(s) 125, 390, 661, 1031, 1170, 1299, 1440, 1582
BsaWI WCCGGW 1 cut(s) 1401
Bsc4I CCNNNNNNNGG 4 cut(s) 411, 503, 762, 1321
Bse118I RCCGGY 2 cut(s) 1147, 1282
Bse1I ACTGG 3 cut(s) 453, 1539, 1579
BseBI CCWGG 2 cut(s) 662, 1033
BseCI ATCGAT 1 cut(s) 9
BseDI CCNNGG 8 cut(s) 125, 390, 661, 1031, 1170, 1299, 1440, 1582
BseGI GGATG 5 cut(s) 444, 512, 924, 1114, 1295
BseLI CCNNNNNNNGG 4 cut(s) 411, 503, 762, 1321
BseMII CTCAG 3 cut(s) 188, 320, 1242
BseNI ACTGG 3 cut(s) 453, 1539, 1579
BseXI GCAGC 2 cut(s) 41, 122
Bsh1236I CGCG 3 cut(s) 392, 1059, 1343
BshFI GGCC 3 cut(s) 667, 1439, 1483
BshNI GGYRCC 2 cut(s) 471, 1528
BshVI ATCGAT 1 cut(s) 9
BsiHKAI GWGCWC 1 cut(s) 175
BsiHKCI CYCGRG 1 cut(s) 168
BsiSI CCGG 3 cut(s) 1148, 1283, 1402
BslI CCNNNNNNNGG 4 cut(s) 411, 503, 762, 1321
BsmI GAATGC 1 cut(s) 425
BsnI GGCC 3 cut(s) 667, 1439, 1483
BsoBI CYCGRG 1 cut(s) 168
Bsp119I TTCGAA 1 cut(s) 288
Bsp1286I GDGCHC 1 cut(s) 175
Bsp143I GATC 6 cut(s) 44, 500, 574, 957, 1003, 1198
Bsp1720I GCTNAGC 1 cut(s) 1097
Bsp19I CCATGG 1 cut(s) 1299
BspACI CCGC 8 cut(s) 22, 390, 392, 405, 866, 1373, 1514, 1517
BspANI GGCC 3 cut(s) 667, 1439, 1483
BspCNI CTCAG 3 cut(s) 187, 321, 1243
BspDI ATCGAT 1 cut(s) 9
BspFNI CGCG 3 cut(s) 392, 1059, 1343
BspHI TCATGA 1 cut(s) 960
BspLI GGNNCC 5 cut(s) 123, 473, 612, 666, 1530
BspMAI CTGCAG 2 cut(s) 31, 1353
BspT104I TTCGAA 1 cut(s) 288
BspT107I GGYRCC 2 cut(s) 471, 1528
BsrBI CCGCTC 1 cut(s) 866
BsrFI RCCGGY 2 cut(s) 1147, 1282
BsrI ACTGG 3 cut(s) 453, 1539, 1579
BssAI RCCGGY 2 cut(s) 1147, 1282
BssECI CCNNGG 8 cut(s) 125, 390, 661, 1031, 1170, 1299, 1440, 1582
BssMI GATC 6 cut(s) 44, 500, 574, 957, 1003, 1198
BssNAI GTATAC 2 cut(s) 387, 1038
BssT1I CCWWGG 4 cut(s) 125, 1170, 1299, 1440
Bst1107I GTATAC 2 cut(s) 387, 1038
Bst2UI CCWGG 2 cut(s) 662, 1033
Bst4CI ACNGT 1 cut(s) 1583
Bst6I CTCTTC 3 cut(s) 864, 948, 981
BstBI TTCGAA 1 cut(s) 288
BstC8I GCNNGC 2 cut(s) 713, 803
BstDEI CTNAG 5 cut(s) 174, 329, 1079, 1097, 1251
BstDSI CCRYGG 3 cut(s) 390, 1299, 1582
BstENI CCTNNNNNAGG 1 cut(s) 1319
BstF5I GGATG 5 cut(s) 444, 512, 924, 1114, 1295
BstFNI CGCG 3 cut(s) 392, 1059, 1343
BstH2I RGCGCY 1 cut(s) 223
BstHHI GCGC 4 cut(s) 222, 1059, 1078, 1345
BstKTI GATC 6 cut(s) 47, 503, 577, 960, 1006, 1201
BstMBI GATC 6 cut(s) 44, 500, 574, 957, 1003, 1198
BstMWI GCNNNNNNNGC 2 cut(s) 265, 1065
BstNI CCWGG 2 cut(s) 662, 1033
BstSCI CCNGG 2 cut(s) 660, 1031
BstSFI CTRYAG 2 cut(s) 27, 1349
BstUI CGCG 3 cut(s) 392, 1059, 1343
BstV1I GCAGC 2 cut(s) 41, 122
BstV2I GAAGAC 1 cut(s) 1201
BstX2I RGATCY 1 cut(s) 574
BstYI RGATCY 1 cut(s) 574
BstZ17I GTATAC 2 cut(s) 387, 1038
Bsu15I ATCGAT 1 cut(s) 9
BsuI GTATCC 3 cut(s) 124, 175, 1297
BsuRI GGCC 3 cut(s) 667, 1439, 1483
BsuTUI ATCGAT 1 cut(s) 9
BtgI CCRYGG 3 cut(s) 390, 1299, 1582
BtsCI GGATG 5 cut(s) 444, 512, 924, 1114, 1295
BtsIMutI CAGTG 2 cut(s) 1532, 1572
Cac8I GCNNGC 2 cut(s) 713, 803
CciI TCATGA 1 cut(s) 960
CfoI GCGC 4 cut(s) 222, 1059, 1078, 1345
Cfr10I RCCGGY 2 cut(s) 1147, 1282
Cfr13I GGNCC 1 cut(s) 665
Cfr42I CCGCGG 1 cut(s) 393
ClaI ATCGAT 1 cut(s) 9
Csp6I GTAC 3 cut(s) 472, 753, 1088
CviAII CATG 9 cut(s) 216, 256, 465, 524, 946, 961, 1069, 1300, 1435
CviQI GTAC 3 cut(s) 472, 753, 1088
DdeI CTNAG 5 cut(s) 174, 329, 1079, 1097, 1251
DpnI GATC 6 cut(s) 46, 502, 576, 959, 1005, 1200
DpnII GATC 6 cut(s) 44, 500, 574, 957, 1003, 1198
DraI TTTAAA 1 cut(s) 588
EaeI YGGCCR 1 cut(s) 1437
Eam1104I CTCTTC 3 cut(s) 864, 948, 981
EarI CTCTTC 3 cut(s) 864, 948, 981
EciI GGCGGA 1 cut(s) 1532
Ecl136II GAGCTC 1 cut(s) 173
Eco130I CCWWGG 4 cut(s) 125, 1170, 1299, 1440
Eco24I GRGCYC 1 cut(s) 175
Eco32I GATATC 1 cut(s) 658
Eco53kI GAGCTC 1 cut(s) 173
Eco57I CTGAAG 1 cut(s) 1163
Eco88I CYCGRG 1 cut(s) 168
EcoICRI GAGCTC 1 cut(s) 173
EcoNI CCTNNNNNAGG 1 cut(s) 1319
EcoRII CCWGG 2 cut(s) 660, 1031
EcoRV GATATC 1 cut(s) 658
EcoT14I CCWWGG 4 cut(s) 125, 1170, 1299, 1440
EcoT38I GRGCYC 1 cut(s) 175
ErhI CCWWGG 4 cut(s) 125, 1170, 1299, 1440
FaeI CATG 9 cut(s) 219, 259, 468, 527, 949, 964, 1072, 1303, 1438
FatI CATG 9 cut(s) 215, 255, 464, 523, 945, 960, 1068, 1299, 1434
FblI GTMKAC 2 cut(s) 386, 1037
Fnu4HI GCNGC 4 cut(s) 30, 111, 1374, 1515
FokI GGATG 5 cut(s) 431, 519, 931, 1121, 1282
FriOI GRGCYC 1 cut(s) 175
Fsp4HI GCNGC 4 cut(s) 30, 111, 1374, 1515
FspBI CTAG 2 cut(s) 68, 569
GlaI GCGC 4 cut(s) 221, 1058, 1077, 1344
GluI GCNGC 4 cut(s) 30, 111, 1374, 1515
GsuI CTGGAG 1 cut(s) 1028
HaeII RGCGCY 1 cut(s) 223
HaeIII GGCC 3 cut(s) 667, 1439, 1483
HapII CCGG 3 cut(s) 1148, 1283, 1402
HhaI GCGC 4 cut(s) 222, 1059, 1078, 1345
Hin1II CATG 9 cut(s) 219, 259, 468, 527, 949, 964, 1072, 1303, 1438
Hin6I GCGC 4 cut(s) 220, 1057, 1076, 1343
HinP1I GCGC 4 cut(s) 220, 1057, 1076, 1343
HinfI GANTC 6 cut(s) 6, 158, 325, 552, 1012, 1328
HpaII CCGG 3 cut(s) 1148, 1283, 1402
HphI GGTGA 2 cut(s) 1162, 1337
Hpy166II GTNNAC 3 cut(s) 387, 1038, 1233
Hpy188I TCNGA 6 cut(s) 44, 177, 330, 891, 1143, 1182
Hpy188III TCNNGA 7 cut(s) 92, 168, 504, 961, 973, 1007, 1318
Hpy8I GTNNAC 3 cut(s) 387, 1038, 1233
HpyAV CCTTC 6 cut(s) 187, 542, 844, 943, 1214, 1315
HpyCH4III ACNGT 1 cut(s) 1583
HpyF10VI GCNNNNNNNGC 2 cut(s) 265, 1065
HpyF3I CTNAG 5 cut(s) 174, 329, 1079, 1097, 1251
Hsp92II CATG 9 cut(s) 219, 259, 468, 527, 949, 964, 1072, 1303, 1438
HspAI GCGC 4 cut(s) 220, 1057, 1076, 1343
KpnI GGTACC 1 cut(s) 475
KspI CCGCGG 1 cut(s) 393
Kzo9I GATC 6 cut(s) 44, 500, 574, 957, 1003, 1198
Lsp1109I GCAGC 2 cut(s) 41, 122
LweI GCATC 3 cut(s) 497, 631, 1367
MaeI CTAG 2 cut(s) 68, 569
MaeIII GTNAC 6 cut(s) 49, 302, 394, 541, 1406, 1459
MalI GATC 6 cut(s) 46, 502, 576, 959, 1005, 1200
MbiI CCGCTC 1 cut(s) 866
MboI GATC 6 cut(s) 44, 500, 574, 957, 1003, 1198
MboII GAAGA 6 cut(s) 330, 881, 965, 998, 1019, 1201
MfeI CAATTG 1 cut(s) 537
MflI RGATCY 1 cut(s) 574
MhlI GDGCHC 1 cut(s) 175
MlsI TGGCCA 1 cut(s) 1439
MluNI TGGCCA 1 cut(s) 1439
MmeI TCCRAC 2 cut(s) 588, 704
MnlI CCTC 9 cut(s) 290, 481, 656, 865, 944, 982, 1325, 1396, 1504
Mox20I TGGCCA 1 cut(s) 1439
MroXI GAANNNNTTC 1 cut(s) 1016
MscI TGGCCA 1 cut(s) 1439
MseI TTAA 4 cut(s) 183, 417, 587, 722
Msp20I TGGCCA 1 cut(s) 1439
MspA1I CMGCKG 1 cut(s) 392
MspI CCGG 3 cut(s) 1148, 1283, 1402
MspR9I CCNGG 2 cut(s) 662, 1033
MunI CAATTG 1 cut(s) 537
Mva1269I GAATGC 1 cut(s) 425
MvaI CCWGG 2 cut(s) 662, 1033
MvnI CGCG 3 cut(s) 392, 1059, 1343
MwoI GCNNNNNNNGC 2 cut(s) 265, 1065
NcoI CCATGG 1 cut(s) 1299
NdeII GATC 6 cut(s) 44, 500, 574, 957, 1003, 1198
NlaIII CATG 9 cut(s) 219, 259, 468, 527, 949, 964, 1072, 1303, 1438
NlaIV GGNNCC 5 cut(s) 123, 473, 612, 666, 1530
NmuCI GTSAC 2 cut(s) 49, 1406
NspV TTCGAA 1 cut(s) 288
PagI TCATGA 1 cut(s) 960
PctI GAATGC 1 cut(s) 425
PdmI GAANNNNTTC 1 cut(s) 1016
PfeI GAWTC 6 cut(s) 6, 158, 325, 552, 1012, 1328
PkrI GCNGC 4 cut(s) 31, 112, 1375, 1516
Psp124BI GAGCTC 1 cut(s) 175
Psp6I CCWGG 2 cut(s) 660, 1031
PspGI CCWGG 2 cut(s) 660, 1031
PspN4I GGNNCC 5 cut(s) 123, 473, 612, 666, 1530
PspPI GGNCC 1 cut(s) 665
PstI CTGCAG 2 cut(s) 31, 1353
PsuI RGATCY 1 cut(s) 574
RsaI GTAC 3 cut(s) 473, 754, 1089
RsaNI GTAC 3 cut(s) 472, 753, 1088
SacI GAGCTC 1 cut(s) 175
SacII CCGCGG 1 cut(s) 393
SaqAI TTAA 4 cut(s) 183, 417, 587, 722
SatI GCNGC 4 cut(s) 30, 111, 1374, 1515
Sau3AI GATC 6 cut(s) 44, 500, 574, 957, 1003, 1198
Sau96I GGNCC 1 cut(s) 665
ScrFI CCNGG 2 cut(s) 662, 1033
SduI GDGCHC 1 cut(s) 175
SfaNI GCATC 3 cut(s) 497, 631, 1367
SfcI CTRYAG 2 cut(s) 27, 1349
Sfr303I CCGCGG 1 cut(s) 393
SfuI TTCGAA 1 cut(s) 288
SgrBI CCGCGG 1 cut(s) 393
SmlI CTYRAG 1 cut(s) 1316
SmoI CTYRAG 1 cut(s) 1316
SsiI CCGC 8 cut(s) 22, 390, 392, 405, 866, 1373, 1514, 1517
SspI AATATT 1 cut(s) 633
SspMI CTAG 2 cut(s) 68, 569
SstI GAGCTC 1 cut(s) 175
StyD4I CCNGG 2 cut(s) 660, 1031
StyI CCWWGG 4 cut(s) 125, 1170, 1299, 1440
TaaI ACNGT 1 cut(s) 1583
TaqI TCGA 7 cut(s) 9, 288, 370, 1201, 1388, 1488, 1568
TauI GCSGC 2 cut(s) 1376, 1517
TfiI GAWTC 6 cut(s) 6, 158, 325, 552, 1012, 1328
Tru1I TTAA 4 cut(s) 183, 417, 587, 722
Tru9I TTAA 4 cut(s) 183, 417, 587, 722
TscAI CASTG 2 cut(s) 1539, 1579
TseFI GTSAC 2 cut(s) 49, 1406
TseI GCWGC 2 cut(s) 29, 110
Tsp45I GTSAC 2 cut(s) 49, 1406
TspDTI ATGAA 4 cut(s) 962, 977, 1125, 1201
TspGWI ACGGA 1 cut(s) 68
TspRI CASTG 2 cut(s) 1539, 1579
XagI CCTNNNNNAGG 1 cut(s) 1319
XapI RAATTY 8 cut(s) 104, 136, 197, 363, 372, 673, 718, 885
XmiI GTMKAC 2 cut(s) 386, 1037
XmnI GAANNNNTTC 1 cut(s) 1016
XspI CTAG 2 cut(s) 68, 569
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.