MD01G1221100.v1.1

Cyclic nucleotide-gated ion channel 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr01
OG0000119
Physical Location & Seq
Reverse (-)
31320207 .. 31331620
11414 bp
Loading structure...
UTR
Exon/CDS
Intron
MD01G1221100.v1.1.491

Sequence Viewer

Length: 1263 bp
ATGGTAGTTATGTTTTACAACATGAAGGGCTCAGGATTTGTGGAACACTTATCCTTTCTGAATTTTTTTCTTCTCTGTCAATATTTTCCGAGGATTTATCGAATTTACCTATCTGCCAAGGAATTCAAAAGGACTAATGGGATCTGGGCTAAGGGCCTGTACAACTTGATTCTCTACATTCTTGCTAGTCACGTACTTGGAGCTTTTTGGTACTTATTTTCTATTGAACGAGAGTTAACATGTTGGCACATGGCTTGTGTAAAGTCTGGTAACAATTTCAGGGAATGTATGAGTACTTTCCACTGTGATAATCAGAGGACTACTACAAAATATATAACAATTCTAGACAAGTATTGCCCGTTGAATAATTCAGATGGTGGTCTGTTTAACTTTGGAATATTTCTTGATTCCCTTAAGGATCGAAACACAGAGCATATAAATTTCGGAAAGAAGTTCTTTTACTGTTTTTGGTGGGGCCTGCGAAATCTAAGTACTTTTGGGACTAATCTGACAACAAGTACGTATGTGTATGAAAACTTGTTTGTGGTTTTCATTTCTATCGTTGGCTTGCTACTGTTTACATATCTCATCGGAAACGTGCAGTTGGAAGCTACAAAACAAGAGGAGAGGAGACGAAAATATGCACAAGATGACGTAGACAAGTGGATGTCCATAAATGAAGTCCCTGATCATATAAAGAGACAAATCTTGAGTAGCATAGAAGAACAAGAATTGGAACAAGAGAGTGATGCTGATCTCCATAATTCTCTGTTCTATATTCGTCCCAAGAATATCAGACCACATCAGATGCTTCATTTTTGCATGAAAACACTTAAGAACGTAAAAAAGCTTCAAAACATGGCTGACGAAGTGTTGAAGTCGATGTGCGACTGTCTGAAGCCAGTGACGTACAATAAGAACGAATTCGTTTTTCGAATGGGAGATCCAGTCGACTGCATGCTGTTCATTATTAAAGGGACAGTGTGGACGTACGCGTTGAGTGATAGTCAAGCTGGGCAAGGAATCTCATCGTTGGCCACCAAGCGCCTCGGGAAAGGTGACTTTTACGGGGAAGAGCTTCTTGATTGCGCATCAGACAGTTTCACCGAACTTCCAGCCTCCGGCAAACATGTCAAATGTCAGACAAAAGTAGAAGCATTTCTGCTCATGGCCAACGACTTGGACGCTGTAGTTTCCGAACACCGGCTAAAGTGGGAGGAAAACGAGATGCGTTCTCAAGAGGTGGAGATCATGGCAACTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
Ion_trans cNMP_binding

Protein Analysis

421

Amino Acids

48.96

Weight (kDa)

6.61

Isoelectric Point (pI)

43.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ion_trans PF00520 15 - 209 6e-11 Ion transport protein
cNMP_binding PF00027 302 - 361 1.6e-06 Cyclic nucleotide-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000119)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g10570 FvH4_4g36390 FvH4_7g31840 FvH4_7g31840 FvH4_7g31850 FvH4_7g31850 FvH4_7g31861 FvH4_7g31861 FvH4_7g31950
malus_domestica MD01G1054600.v1.1 MD01G1221100.v1.1 MD01G1221400.v1.1 MD01G1221600.v1.1 MD01G1221800.v1.1 MD01G1222000.v1.1 MD01G1222100.v1.1 MD07G1140800.v1.1 MD07G1291200.v1.1 MD07G1291400.v1.1 MD07G1291500.v1.1 MD07G1291700.v1.1 MD07G1292500.v1.1 MD07G1292700.v1.1 MD07G1292800.v1.1 MD07G1292900.v1.1 MD08G1241600.v1.1 MD11G1083800.v1.1 MD15G1431600.v1.1
prunus_persica Prupe.1G017800_v2.0.a1 Prupe.1G017800_v2.0.a1 Prupe.1G162800_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312700_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G143000_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1
pyrus_communis pycom01g23050 pycom01g23070 pycom01g23090 pycom01g23100 pycom01g23110 pycom01g23120 pycom01g23170 pycom07g26410 pycom07g26440 pycom07g26470 pycom07g26480 pycom07g26490 pycom07g26500 pycom07g26510 pycom07g26530 pycom07g26540 pycom07g26570 pycom07g26580 pycom07g26590 pycom08g20940
rosa_chinensis RchiOBHm_Chr1g0324571 RchiOBHm_Chr1g0336181 RchiOBHm_Chr1g0381061 RchiOBHm_Chr1g0381091 RchiOBHm_Chr1g0381121 RchiOBHm_Chr1g0381131 RchiOBHm_Chr1g0381141 RchiOBHm_Chr1g0381161 RchiOBHm_Chr1g0381211 RchiOBHm_Chr2g0110361 RchiOBHm_Chr2g0120231 RchiOBHm_Chr3g0486281 RchiOBHm_Chr3g0486311 RchiOBHm_Chr3g0486401 RchiOBHm_Chr4g0409511 RchiOBHm_Chr4g0409521 RchiOBHm_Chr5g0017271 RchiOBHm_Chr5g0048781 RchiOBHm_Chr5g0048811
rosa_laevigata RLG00000002401 RLG00000008559 RLG00000017798 RLG00000017799 RLG00000023082 RLG00000023088 RLG00000026230 RLG00000026238 RLG00000026240 RLG00000026241 RLG00000026242 RLG00000026243 RLG00000026244 RLG00000026246 RLG00000026247 RLG00000026248 RLG00000029876 RLG00000030189 RLG00000034579
rosa_multiflora Rmu_co8101374.1_g000001 Rmu_co8309149.1_g000001 Rmu_co8450063.1_g000001 Rmu_sc0000441.1_g000094 Rmu_sc0000479.1_g000005 Rmu_sc0000647.1_g000006 Rmu_sc0001393.1_g000031 Rmu_sc0001423.1_g000037 Rmu_sc0001616.1_g000015 Rmu_sc0001857.1_g000011 Rmu_sc0002183.1_g000013 Rmu_sc0002183.1_g000028 Rmu_sc0002183.1_g000030 Rmu_sc0002688.1_g000003 Rmu_sc0002688.1_g000020 Rmu_sc0003801.1_g000003 Rmu_sc0003801.1_g000004 Rmu_sc0004125.1_g000006 Rmu_sc0004494.1_g000005 Rmu_sc0004494.1_g000006 Rmu_sc0004494.1_g000008 Rmu_sc0004494.1_g000009 Rmu_sc0005842.1_g000004 Rmu_sc0006872.1_g000001 Rmu_sc0006872.1_g000005 Rmu_sc0006872.1_g000009 Rmu_sc0006872.1_g000010 Rmu_sc0008053.1_g000026
rosa_roxburghii Rroxscaffold_159G00432960 Rroxscaffold_1G00033060 Rroxscaffold_2G00123150 Rroxscaffold_2G00123170 Rroxscaffold_2G00133500 Rroxscaffold_2G00133550 Rroxscaffold_4G00278650 Rroxscaffold_4G00278750 Rroxscaffold_4G00278790 Rroxscaffold_4G00278800 Rroxscaffold_4G00278810 Rroxscaffold_4G00325390 Rroxscaffold_5G00354010 Rroxscaffold_6G00395890 Rroxscaffold_6G00395900 Rroxscaffold_6G00395920
rosa_rugosa Rorug01G0046900.1 Rorug01G0427000 Rorug01G0427100 Rorug01G0427200 Rorug01G0427300 Rorug01G0427400 Rorug01G0427500 Rorug01G0427500 Rorug01G0427600 Rorug01G0427600 Rorug01G0427700 Rorug01G0427700 Rorug01G0427800 Rorug01G0428700 Rorug02G0166400 Rorug02G0166500 Rorug02G0166500 Rorug02G0166600 Rorug02G0166600 Rorug02G0166700 Rorug02G0167300 Rorug02G0167300 Rorug02G0167300 Rorug03G0224600 Rorug03G0224600 Rorug04G0094400 Rorug05G0241100 Rorug05G0241200
rosa_samantha Rh1BG407700 Rh1BG407900 Rh1BG409000 Rh1CG064700 Rh1CG420900 Rh1CG421000 Rh1CG421200 Rh1CG421300 Rh1CG421800 Rh1CG421900 Rh1CG422000 Rh1CG422200 Rh1CG422300 Rh1CG423600 Rh1DG437600 Rh1DG438900 Rh1DG439000 Rh1DG440300 Rh2AG219100 Rh2CG220700 Rh2DG225300 Rh3AG274400 Rh3AG274600 Rh3CG308900 Rh3DG305800 Rh4AG156400 Rh5AG129000 Rh5AG320900 Rh5CG139600
rosa_wichuraiana Rw1G005300 Rw1G039280 Rw1G039300 Rw1G039310 Rw1G039320 Rw1G039330 Rw1G039340 Rw1G039360 Rw1G039390 Rw2G016910 Rw2G022800 Rw3G024330 Rw3G024340 Rw3G024350 Rw3G024400 Rw4G012810 Rw5G030120 Rw5G030280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1090
AccI GTMKAC 2 cut(s) 657, 951
AccII CGCG 1 cut(s) 995
AclWI GGATC 3 cut(s) 149, 426, 938
AcoI YGGCCR 2 cut(s) 1035, 1170
AcsI RAATTY 5 cut(s) 61, 102, 122, 439, 923
AcuI CTGAAG 1 cut(s) 917
AfaI GTAC 8 cut(s) 161, 195, 212, 295, 493, 520, 911, 992
AfiI CCNNNNNNNGG 2 cut(s) 1121, 1203
AflII CTTAAG 2 cut(s) 413, 833
AflIII ACRYGT 3 cut(s) 239, 993, 1129
AgsI TTSAA 5 cut(s) 127, 227, 364, 854, 877
AluBI AGCT 5 cut(s) 203, 611, 850, 1013, 1078
AluI AGCT 5 cut(s) 203, 611, 850, 1013, 1078
Alw26I GTCTC 2 cut(s) 625, 694
AlwI GGATC 3 cut(s) 149, 426, 938
Ama87I CYCGRG 1 cut(s) 1049
AoxI GGCC 4 cut(s) 154, 475, 1035, 1170
ApoI RAATTY 5 cut(s) 61, 102, 122, 439, 923
Asp700I GAANNNNTTC 3 cut(s) 923, 1077, 1158
AspLEI GCGC 2 cut(s) 1047, 1091
AspS9I GGNCC 2 cut(s) 154, 475
AsuHPI GGTGA 2 cut(s) 1070, 1096
AsuII TTCGAA 1 cut(s) 934
AvaI CYCGRG 1 cut(s) 1049
BalI TGGCCA 2 cut(s) 1037, 1172
BanII GRGCYC 1 cut(s) 32
BarI GAAGNNNNNNTAC 4 cut(s) 443, 475, 834, 866
BccI CCATC 1 cut(s) 368
BclI TGATCA 1 cut(s) 688
BcoDI GTCTC 2 cut(s) 625, 694
BfaI CTAG 2 cut(s) 186, 344
BfmI CTRYAG 1 cut(s) 1188
BfoI RGCGCY 1 cut(s) 1048
BfrI CTTAAG 2 cut(s) 413, 833
BmcAI AGTACT 2 cut(s) 295, 493
BmeT110I CYCGRG 1 cut(s) 1049
BmgT120I GGNCC 2 cut(s) 154, 475
BmiI GGNNCC 1 cut(s) 476
BmsI GCATC 4 cut(s) 739, 798, 1100, 1218
Bpu10I CCTNAGC 2 cut(s) 31, 150
Bpu14I TTCGAA 1 cut(s) 934
BpuEI CTTGAG 2 cut(s) 730, 1221
BsaAI YACGTR 2 cut(s) 193, 522
BsaBI GATNNNNATC 1 cut(s) 753
BsaJI CCNNGG 3 cut(s) 89, 117, 1048
BsaXI ACNNNNNCTCC 2 cut(s) 933, 963
Bsc4I CCNNNNNNNGG 2 cut(s) 1121, 1203
Bse118I RCCGGY 1 cut(s) 1203
Bse1I ACTGG 2 cut(s) 902, 947
Bse8I GATNNNNATC 1 cut(s) 753
BseDI CCNNGG 3 cut(s) 89, 117, 1048
BseGI GGATG 1 cut(s) 672
BseJI GATNNNNATC 1 cut(s) 753
BseLI CCNNNNNNNGG 2 cut(s) 1121, 1203
BseMII CTCAG 1 cut(s) 45
BseNI ACTGG 2 cut(s) 902, 947
BseRI GAGGAG 2 cut(s) 638, 643
BseYI CCCAGC 1 cut(s) 1013
BsgI GTGCAG 1 cut(s) 620
Bsh1236I CGCG 1 cut(s) 995
BshFI GGCC 4 cut(s) 156, 477, 1037, 1172
BsiHKCI CYCGRG 1 cut(s) 1049
BsiSI CCGG 2 cut(s) 1122, 1204
BsiWI CGTACG 1 cut(s) 990
BslFI GGGAC 4 cut(s) 514, 668, 768, 991
BslI CCNNNNNNNGG 2 cut(s) 1121, 1203
BsmAI GTCTC 2 cut(s) 625, 694
BsmBI CGTCTC 1 cut(s) 625
BsmFI GGGAC 4 cut(s) 514, 668, 768, 991
BsnI GGCC 4 cut(s) 156, 477, 1037, 1172
BsoBI CYCGRG 1 cut(s) 1049
Bsp119I TTCGAA 1 cut(s) 934
Bsp1286I GDGCHC 1 cut(s) 32
Bsp1407I TGTACA 1 cut(s) 159
Bsp143I GATC 6 cut(s) 141, 418, 688, 754, 943, 1248
BspANI GGCC 4 cut(s) 156, 477, 1037, 1172
BspCNI CTCAG 1 cut(s) 44
BspFNI CGCG 1 cut(s) 995
BspLI GGNNCC 1 cut(s) 476
BspPI GGATC 3 cut(s) 149, 426, 938
BspQI GCTCTTC 1 cut(s) 1068
BspT104I TTCGAA 1 cut(s) 934
BspTI CTTAAG 2 cut(s) 413, 833
BsrFI RCCGGY 1 cut(s) 1203
BsrGI TGTACA 1 cut(s) 159
BsrI ACTGG 2 cut(s) 902, 947
BssAI RCCGGY 1 cut(s) 1203
BssECI CCNNGG 3 cut(s) 89, 117, 1048
BssMI GATC 6 cut(s) 141, 418, 688, 754, 943, 1248
BssT1I CCWWGG 1 cut(s) 117
Bst4CI ACNGT 6 cut(s) 305, 464, 576, 893, 982, 1100
Bst6I CTCTTC 1 cut(s) 1068
BstAFI CTTAAG 2 cut(s) 413, 833
BstAUI TGTACA 1 cut(s) 159
BstBAI YACGTR 2 cut(s) 193, 522
BstBI TTCGAA 1 cut(s) 934
BstC8I GCNNGC 3 cut(s) 479, 569, 959
BstDEI CTNAG 3 cut(s) 31, 150, 488
BstF5I GGATG 1 cut(s) 672
BstFNI CGCG 1 cut(s) 995
BstH2I RGCGCY 1 cut(s) 1048
BstHHI GCGC 2 cut(s) 1047, 1091
BstKTI GATC 6 cut(s) 144, 421, 691, 757, 946, 1251
BstMAI GTCTC 2 cut(s) 625, 694
BstMBI GATC 6 cut(s) 141, 418, 688, 754, 943, 1248
BstNSI RCATGY 3 cut(s) 243, 961, 1133
BstSFI CTRYAG 1 cut(s) 1188
BstSNI TACGTA 1 cut(s) 522
BstUI CGCG 1 cut(s) 995
BstX2I RGATCY 2 cut(s) 141, 943
BstXI CCANNNNNNTGG 1 cut(s) 1180
BstYI RGATCY 2 cut(s) 141, 943
BsuRI GGCC 4 cut(s) 156, 477, 1037, 1172
BtsCI GGATG 1 cut(s) 672
BtsIMutI CAGTG 3 cut(s) 301, 909, 987
Cac8I GCNNGC 3 cut(s) 479, 569, 959
CfoI GCGC 2 cut(s) 1047, 1091
Cfr10I RCCGGY 1 cut(s) 1203
Cfr13I GGNCC 2 cut(s) 154, 475
CseI GACGC 1 cut(s) 1193
Csp6I GTAC 8 cut(s) 160, 194, 211, 294, 492, 519, 910, 991
CviAII CATG 9 cut(s) 22, 240, 250, 823, 859, 958, 1130, 1168, 1252
CviQI GTAC 8 cut(s) 160, 194, 211, 294, 492, 519, 910, 991
DdeI CTNAG 3 cut(s) 31, 150, 488
DpnI GATC 6 cut(s) 143, 420, 690, 756, 945, 1250
DpnII GATC 6 cut(s) 141, 418, 688, 754, 943, 1248
EaeI YGGCCR 2 cut(s) 1035, 1170
Eam1104I CTCTTC 1 cut(s) 1068
EarI CTCTTC 1 cut(s) 1068
Eco105I TACGTA 1 cut(s) 522
Eco130I CCWWGG 1 cut(s) 117
Eco24I GRGCYC 1 cut(s) 32
Eco57I CTGAAG 1 cut(s) 917
Eco88I CYCGRG 1 cut(s) 1049
EcoO109I RGGNCCY 2 cut(s) 154, 475
EcoRI GAATTC 2 cut(s) 122, 923
EcoT14I CCWWGG 1 cut(s) 117
EcoT38I GRGCYC 1 cut(s) 32
ErhI CCWWGG 1 cut(s) 117
Esp3I CGTCTC 1 cut(s) 625
FaeI CATG 9 cut(s) 25, 243, 253, 826, 862, 961, 1133, 1171, 1255
FalI AAGNNNNNCTT 4 cut(s) 440, 472, 1065, 1097
FaqI GGGAC 4 cut(s) 514, 668, 768, 991
FatI CATG 9 cut(s) 21, 239, 249, 822, 858, 957, 1129, 1167, 1251
FbaI TGATCA 1 cut(s) 688
FblI GTMKAC 2 cut(s) 657, 951
FokI GGATG 1 cut(s) 679
FriOI GRGCYC 1 cut(s) 32
FspBI CTAG 2 cut(s) 186, 344
FspI TGCGCA 1 cut(s) 1090
GlaI GCGC 2 cut(s) 1046, 1090
GsaI CCCAGC 1 cut(s) 1017
HaeII RGCGCY 1 cut(s) 1048
HaeIII GGCC 4 cut(s) 156, 477, 1037, 1172
HapII CCGG 2 cut(s) 1122, 1204
HgaI GACGC 1 cut(s) 1193
HhaI GCGC 2 cut(s) 1047, 1091
Hin1II CATG 9 cut(s) 25, 243, 253, 826, 862, 961, 1133, 1171, 1255
Hin6I GCGC 2 cut(s) 1045, 1089
HinP1I GCGC 2 cut(s) 1045, 1089
HincII GTYRAC 2 cut(s) 237, 952
HindII GTYRAC 2 cut(s) 237, 952
HindIII AAGCTT 1 cut(s) 848
HinfI GANTC 3 cut(s) 169, 407, 1023
HpaI GTTAAC 1 cut(s) 237
HpaII CCGG 2 cut(s) 1122, 1204
HphI GGTGA 2 cut(s) 1070, 1096
Hpy166II GTNNAC 5 cut(s) 237, 579, 658, 952, 987
Hpy188III TCNNGA 7 cut(s) 33, 344, 404, 709, 1051, 1082, 1238
Hpy8I GTNNAC 5 cut(s) 237, 579, 658, 952, 987
HpyAV CCTTC 1 cut(s) 19
HpyCH4III ACNGT 6 cut(s) 305, 464, 576, 893, 982, 1100
HpyCH4IV ACGT 7 cut(s) 192, 521, 597, 654, 840, 908, 989
HpyCH4V TGCA 4 cut(s) 601, 644, 822, 957
HpyF3I CTNAG 3 cut(s) 31, 150, 488
HpySE526I ACGT 7 cut(s) 192, 521, 597, 654, 840, 908, 989
Hsp92II CATG 9 cut(s) 25, 243, 253, 826, 862, 961, 1133, 1171, 1255
HspAI GCGC 2 cut(s) 1045, 1089
Ksp22I TGATCA 1 cut(s) 688
KspAI GTTAAC 1 cut(s) 237
Kzo9I GATC 6 cut(s) 141, 418, 688, 754, 943, 1248
LguI GCTCTTC 1 cut(s) 1068
LmnI GCTCC 1 cut(s) 200
LweI GCATC 4 cut(s) 739, 798, 1100, 1218
MaeI CTAG 2 cut(s) 186, 344
MaeII ACGT 7 cut(s) 192, 521, 597, 654, 840, 908, 989
MaeIII GTNAC 4 cut(s) 188, 269, 904, 1058
MalI GATC 6 cut(s) 143, 420, 690, 756, 945, 1250
MboI GATC 6 cut(s) 141, 418, 688, 754, 943, 1248
MboII GAAGA 3 cut(s) 62, 734, 1085
MflI RGATCY 2 cut(s) 141, 943
MhlI GDGCHC 1 cut(s) 32
MlsI TGGCCA 2 cut(s) 1037, 1172
MluI ACGCGT 1 cut(s) 993
MluNI TGGCCA 2 cut(s) 1037, 1172
MmeI TCCRAC 1 cut(s) 585
MnlI CCTC 8 cut(s) 84, 309, 616, 621, 1058, 1129, 1210, 1234
Mox20I TGGCCA 2 cut(s) 1037, 1172
MroXI GAANNNNTTC 3 cut(s) 923, 1077, 1158
MscI TGGCCA 2 cut(s) 1037, 1172
MseI TTAA 6 cut(s) 236, 387, 414, 834, 972, 1261
Msp20I TGGCCA 2 cut(s) 1037, 1172
MspCI CTTAAG 2 cut(s) 413, 833
MspI CCGG 2 cut(s) 1122, 1204
MvnI CGCG 1 cut(s) 995
NdeII GATC 6 cut(s) 141, 418, 688, 754, 943, 1248
NlaIII CATG 9 cut(s) 25, 243, 253, 826, 862, 961, 1133, 1171, 1255
NlaIV GGNNCC 1 cut(s) 476
NmuCI GTSAC 3 cut(s) 188, 904, 1058
NsbI TGCGCA 1 cut(s) 1090
NspI RCATGY 3 cut(s) 243, 961, 1133
NspV TTCGAA 1 cut(s) 934
PaeI GCATGC 1 cut(s) 961
PciI ACATGT 2 cut(s) 239, 1129
PciSI GCTCTTC 1 cut(s) 1068
PdmI GAANNNNTTC 3 cut(s) 923, 1077, 1158
PfeI GAWTC 3 cut(s) 169, 407, 1023
Pfl23II CGTACG 1 cut(s) 990
Ppu21I YACGTR 2 cut(s) 193, 522
PscI ACATGT 2 cut(s) 239, 1129
PspFI CCCAGC 1 cut(s) 1013
PspLI CGTACG 1 cut(s) 990
PspN4I GGNNCC 1 cut(s) 476
PspPI GGNCC 2 cut(s) 154, 475
PsuI RGATCY 2 cut(s) 141, 943
RsaI GTAC 8 cut(s) 161, 195, 212, 295, 493, 520, 911, 992
RsaNI GTAC 8 cut(s) 160, 194, 211, 294, 492, 519, 910, 991
SalI GTCGAC 1 cut(s) 950
SapI GCTCTTC 1 cut(s) 1068
SaqAI TTAA 6 cut(s) 236, 387, 414, 834, 972, 1261
Sau3AI GATC 6 cut(s) 141, 418, 688, 754, 943, 1248
Sau96I GGNCC 2 cut(s) 154, 475
ScaI AGTACT 2 cut(s) 295, 493
SduI GDGCHC 1 cut(s) 32
SfaNI GCATC 4 cut(s) 739, 798, 1100, 1218
SfcI CTRYAG 1 cut(s) 1188
SfuI TTCGAA 1 cut(s) 934
SmlI CTYRAG 4 cut(s) 413, 709, 833, 1236
SmoI CTYRAG 4 cut(s) 413, 709, 833, 1236
SnaBI TACGTA 1 cut(s) 522
SphI GCATGC 1 cut(s) 961
SspI AATATT 2 cut(s) 83, 399
SspMI CTAG 2 cut(s) 186, 344
StyI CCWWGG 1 cut(s) 117
TaaI ACNGT 6 cut(s) 305, 464, 576, 893, 982, 1100
TaiI ACGT 7 cut(s) 195, 524, 600, 657, 843, 911, 992
TaqI TCGA 5 cut(s) 100, 421, 881, 934, 951
TatI WGTACW 3 cut(s) 159, 293, 491
TfiI GAWTC 3 cut(s) 169, 407, 1023
Tru1I TTAA 6 cut(s) 236, 387, 414, 834, 972, 1261
Tru9I TTAA 6 cut(s) 236, 387, 414, 834, 972, 1261
TscAI CASTG 3 cut(s) 308, 909, 987
TseFI GTSAC 3 cut(s) 188, 904, 1058
Tsp45I GTSAC 3 cut(s) 188, 904, 1058
TspDTI ATGAA 7 cut(s) 38, 541, 546, 693, 803, 839, 955
TspRI CASTG 3 cut(s) 308, 909, 987
Vha464I CTTAAG 2 cut(s) 413, 833
XapI RAATTY 5 cut(s) 61, 102, 122, 439, 923
XbaI TCTAGA 1 cut(s) 343
XceI RCATGY 3 cut(s) 243, 961, 1133
XmiI GTMKAC 2 cut(s) 657, 951
XmnI GAANNNNTTC 3 cut(s) 923, 1077, 1158
XspI CTAG 2 cut(s) 186, 344
ZrmI AGTACT 2 cut(s) 295, 493
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.