FvH4_7g31861

Cyclic nucleotide-gated ion channel 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0000119
Physical Location & Seq
Reverse (-)
22979723 .. 22982741
3019 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g31861.t1

Sequence Viewer

Length: 1878 bp
ATGATCAACTCGGCGGATGAAGCCCCAGAAGTTAGTTTCACAGGCACAGGTTACACAACTCAATATGGACAACGTTGGAGACCATCAGAAATGAAGAAAACGAAAAGGAGATTCAGTCCGTGGTGGACTAGTTTCTGGGTTCGGGGTTCATGGTGGGATTCCATATTTGTAGCCTCGTGTGTTATCGCAGTCTCACTGGATCCACTCTTCTTTTACATTCCTATCATCGATAGGGAAAGGAAGTGCCTTCAAGCAGACATACAATTGAGAACTGCAACTATCATTTTGCGATCACTCATGGATATCACTTTTATAGTGCATATTATCTATCAGATTCGTGAAGCTATGATCGCTGCAGCCTCGGATAAGATGGCGACGCAGGAAGAATCGAAATTTTTCTATATTTTTGAATATTTTGATGCTGTAATTGACAATTTGTCATGGCGCTCTTTCATCACTGACATTCTGTCTGTTCTTCCTATCCCACAGGTGCTACTACTTATTGTCTTCTTCAAAATGAGAGGCCCTGGATATTTGGACCAGAGAAAGATTCTGAATTTCTTTCTTCTAGCTCAATATTTGGCAAGAATTTATCGTATTCACGTATCATCCAAAATACTTAGAAAGAGCCATGGAATATGGATTAAAGGACTATTCAATTTCTTTCTCTATATTTTTGCAAGTCATGTACTTGGAGCCTTTTGGTATTTCTTTTCGATTCAACGAGAGACATCATGTTGGCATCGAAAATGCGGTGACAATTGTATAAGTAACTTTTATTGTGATGACTACAAAAATTCCACAGATATGGTGACACTCGTAACACAGCTAAATGCATCATGCCCTATAATTGCCGATGGACCATTTGATTTCGGAATATTTCTTGATTCCCTAAAGTCCAATAACACAGTATCAACTAACTTTTCACAAAAGTTATGTTACTGTTTCTGGTGGGGTTTGCGAAATTTGAGTAATTTTGGCACGAACCTTGTAACAAGTGACTACGTATGGGAGAATTTATTCGCAATTCTTATTTCTATCATTGGCTTGTTACTATTTTTGTACCTCATAGGAAATGTGCAGACATTTATGTCTATGGAAACTGAAAAGTCAGAGGAGATAAGAAGGAAGATCAAATCAAAAGAGCAAGATATGAAAGTGTGGATGGAGAAGAATTGCCTCCCTGAGAATTTGAGGAAAGAAATCATGGTAAAGATAAGAGAAAAATTAGAACAAGACAAGCACGCCGACGTGGAGAATCTGTTCTCCATTCTTCCCTGGGCAACCAAAAAATCGCTCAAGCGTGTTCTCTGCATGAGTACTCTAAGAAAAGTACCAATACTTAAAGGTATGAATCCAAAGGTGTTGAAAATGATATGCGACTATCTAAAGCCTGTGATATACCCTGAGAATAGCTATGTTGCCAAGGTGGATGAACCAGTTGATCGAATGGTGCTCGTCACAGAAGGAACTATGTGGATCTACTCGTCGAATAGTACTGGTACTTCTGCATCTAATAAGATTCACAGGACGGTTGAGAACGGTGGTATTTATGGAGATGAACAGCTTTTGAGTTGGGTGTCGAAGAACATGCAACACGTCTCGCTTGCAACCATCCCGATCTCAACAGAAAATGTGAAATGTCACACGAGAGTGGAAGGGTTTGCTATCACGGCCACGGACTTGAAAGCAGTTGCCACCAAGTGCAAAATGTACTGGAACTACGACGATCCTCGAGAGAAACAGAGGGTGGCGAGCTCTACCATAGGAATGTCGTTTCGTCGAAACCGCAGTAACCCGAATAGGCCGGCTACCGTTGGAGTAGGAGCTGCGACCTCGCCAAGAACACGAATTGAGTATCTGCAGAAGAGAACCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
Ion_trans

Protein Analysis

626

Amino Acids

72.46

Weight (kDa)

9.25

Isoelectric Point (pI)

38.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ion_trans PF00520 50 - 371 1.9e-10 Ion transport protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000119)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g10570 FvH4_4g36390 FvH4_7g31840 FvH4_7g31840 FvH4_7g31850 FvH4_7g31850 FvH4_7g31861 FvH4_7g31861 FvH4_7g31950
malus_domestica MD01G1054600.v1.1 MD01G1221100.v1.1 MD01G1221400.v1.1 MD01G1221600.v1.1 MD01G1221800.v1.1 MD01G1222000.v1.1 MD01G1222100.v1.1 MD07G1140800.v1.1 MD07G1291200.v1.1 MD07G1291400.v1.1 MD07G1291500.v1.1 MD07G1291700.v1.1 MD07G1292500.v1.1 MD07G1292700.v1.1 MD07G1292800.v1.1 MD07G1292900.v1.1 MD08G1241600.v1.1 MD11G1083800.v1.1 MD15G1431600.v1.1
prunus_persica Prupe.1G017800_v2.0.a1 Prupe.1G017800_v2.0.a1 Prupe.1G162800_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312700_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G143000_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1
pyrus_communis pycom01g23050 pycom01g23070 pycom01g23090 pycom01g23100 pycom01g23110 pycom01g23120 pycom01g23170 pycom07g26410 pycom07g26440 pycom07g26470 pycom07g26480 pycom07g26490 pycom07g26500 pycom07g26510 pycom07g26530 pycom07g26540 pycom07g26570 pycom07g26580 pycom07g26590 pycom08g20940
rosa_chinensis RchiOBHm_Chr1g0324571 RchiOBHm_Chr1g0336181 RchiOBHm_Chr1g0381061 RchiOBHm_Chr1g0381091 RchiOBHm_Chr1g0381121 RchiOBHm_Chr1g0381131 RchiOBHm_Chr1g0381141 RchiOBHm_Chr1g0381161 RchiOBHm_Chr1g0381211 RchiOBHm_Chr2g0110361 RchiOBHm_Chr2g0120231 RchiOBHm_Chr3g0486281 RchiOBHm_Chr3g0486311 RchiOBHm_Chr3g0486401 RchiOBHm_Chr4g0409511 RchiOBHm_Chr4g0409521 RchiOBHm_Chr5g0017271 RchiOBHm_Chr5g0048781 RchiOBHm_Chr5g0048811
rosa_laevigata RLG00000002401 RLG00000008559 RLG00000017798 RLG00000017799 RLG00000023082 RLG00000023088 RLG00000026230 RLG00000026238 RLG00000026240 RLG00000026241 RLG00000026242 RLG00000026243 RLG00000026244 RLG00000026246 RLG00000026247 RLG00000026248 RLG00000029876 RLG00000030189 RLG00000034579
rosa_multiflora Rmu_co8101374.1_g000001 Rmu_co8309149.1_g000001 Rmu_co8450063.1_g000001 Rmu_sc0000441.1_g000094 Rmu_sc0000479.1_g000005 Rmu_sc0000647.1_g000006 Rmu_sc0001393.1_g000031 Rmu_sc0001423.1_g000037 Rmu_sc0001616.1_g000015 Rmu_sc0001857.1_g000011 Rmu_sc0002183.1_g000013 Rmu_sc0002183.1_g000028 Rmu_sc0002183.1_g000030 Rmu_sc0002688.1_g000003 Rmu_sc0002688.1_g000020 Rmu_sc0003801.1_g000003 Rmu_sc0003801.1_g000004 Rmu_sc0004125.1_g000006 Rmu_sc0004494.1_g000005 Rmu_sc0004494.1_g000006 Rmu_sc0004494.1_g000008 Rmu_sc0004494.1_g000009 Rmu_sc0005842.1_g000004 Rmu_sc0006872.1_g000001 Rmu_sc0006872.1_g000005 Rmu_sc0006872.1_g000009 Rmu_sc0006872.1_g000010 Rmu_sc0008053.1_g000026
rosa_roxburghii Rroxscaffold_159G00432960 Rroxscaffold_1G00033060 Rroxscaffold_2G00123150 Rroxscaffold_2G00123170 Rroxscaffold_2G00133500 Rroxscaffold_2G00133550 Rroxscaffold_4G00278650 Rroxscaffold_4G00278750 Rroxscaffold_4G00278790 Rroxscaffold_4G00278800 Rroxscaffold_4G00278810 Rroxscaffold_4G00325390 Rroxscaffold_5G00354010 Rroxscaffold_6G00395890 Rroxscaffold_6G00395900 Rroxscaffold_6G00395920
rosa_rugosa Rorug01G0046900.1 Rorug01G0427000 Rorug01G0427100 Rorug01G0427200 Rorug01G0427300 Rorug01G0427400 Rorug01G0427500 Rorug01G0427500 Rorug01G0427600 Rorug01G0427600 Rorug01G0427700 Rorug01G0427700 Rorug01G0427800 Rorug01G0428700 Rorug02G0166400 Rorug02G0166500 Rorug02G0166500 Rorug02G0166600 Rorug02G0166600 Rorug02G0166700 Rorug02G0167300 Rorug02G0167300 Rorug02G0167300 Rorug03G0224600 Rorug03G0224600 Rorug04G0094400 Rorug05G0241100 Rorug05G0241200
rosa_samantha Rh1BG407700 Rh1BG407900 Rh1BG409000 Rh1CG064700 Rh1CG420900 Rh1CG421000 Rh1CG421200 Rh1CG421300 Rh1CG421800 Rh1CG421900 Rh1CG422000 Rh1CG422200 Rh1CG422300 Rh1CG423600 Rh1DG437600 Rh1DG438900 Rh1DG439000 Rh1DG440300 Rh2AG219100 Rh2CG220700 Rh2DG225300 Rh3AG274400 Rh3AG274600 Rh3CG308900 Rh3DG305800 Rh4AG156400 Rh5AG129000 Rh5AG320900 Rh5CG139600
rosa_wichuraiana Rw1G005300 Rw1G039280 Rw1G039300 Rw1G039310 Rw1G039320 Rw1G039330 Rw1G039340 Rw1G039360 Rw1G039390 Rw2G016910 Rw2G022800 Rw3G024330 Rw3G024340 Rw3G024350 Rw3G024400 Rw4G012810 Rw5G030120 Rw5G030280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1090
AciI CCGC 3 cut(s) 14, 753, 1789
AclI AACGTT 1 cut(s) 73
AclWI GGATC 4 cut(s) 194, 207, 1487, 1724
AcoI YGGCCR 1 cut(s) 1674
AcsI RAATTY 7 cut(s) 392, 556, 588, 796, 964, 1015, 1189
AdeI CACNNNGTG 1 cut(s) 1704
AfaI GTAC 7 cut(s) 690, 1064, 1321, 1335, 1498, 1504, 1715
AflIII ACRYGT 1 cut(s) 1597
AgsI TTSAA 7 cut(s) 251, 410, 514, 658, 722, 1369, 1687
AhdI GACNNNNNGTC 2 cut(s) 436, 466
AhlI ACTAGT 1 cut(s) 128
AjiI CACGTC 2 cut(s) 1252, 1600
AjnI CCWGG 2 cut(s) 526, 1277
AleI CACNNNNGTG 1 cut(s) 1652
AloI GAACNNNNNNTCC 2 cut(s) 1247, 1279
AluBI AGCT 7 cut(s) 344, 572, 829, 1416, 1567, 1758, 1829
AluI AGCT 7 cut(s) 344, 572, 829, 1416, 1567, 1758, 1829
Alw21I GWGCWC 2 cut(s) 1458, 1760
Alw26I GTCTC 4 cut(s) 73, 196, 722, 1606
AlwI GGATC 4 cut(s) 194, 207, 1487, 1724
Ama87I CYCGRG 1 cut(s) 1734
AoxI GGCC 3 cut(s) 523, 1674, 1805
ApeKI GCWGC 3 cut(s) 353, 356, 1829
ApoI RAATTY 7 cut(s) 392, 556, 588, 796, 964, 1015, 1189
Asp700I GAANNNNTTC 3 cut(s) 395, 1019, 1262
AspLEI GCGC 1 cut(s) 447
AspS9I GGNCC 3 cut(s) 524, 538, 860
AsuHPI GGTGA 2 cut(s) 767, 823
AvaI CYCGRG 1 cut(s) 1734
AvaII GGWCC 2 cut(s) 538, 860
BamHI GGATCC 1 cut(s) 199
BanII GRGCYC 1 cut(s) 1760
BarI GAAGNNNNNNTAC 2 cut(s) 1489, 1521
BauI CACGAG 2 cut(s) 175, 1648
BbsI GAAGAC 1 cut(s) 499
Bbv12I GWGCWC 2 cut(s) 1458, 1760
BbvI GCAGC 3 cut(s) 340, 368, 1816
BccI CCATC 5 cut(s) 91, 364, 851, 1159, 1622
BceAI ACGGC 1 cut(s) 1689
BcgI CGANNNNNNTGC 2 cut(s) 1573, 1607
BciT130I CCWGG 2 cut(s) 528, 1279
BclI TGATCA 1 cut(s) 3
BcoDI GTCTC 4 cut(s) 73, 196, 722, 1606
BcuI ACTAGT 1 cut(s) 128
BfaI CTAG 2 cut(s) 129, 569
BfmI CTRYAG 2 cut(s) 354, 1862
BfoI RGCGCY 1 cut(s) 448
BisI GCNGC 3 cut(s) 354, 357, 1830
BlsI GCNGC 3 cut(s) 355, 358, 1831
BmcAI AGTACT 2 cut(s) 1321, 1498
Bme1390I CCNGG 2 cut(s) 528, 1279
Bme18I GGWCC 2 cut(s) 538, 860
BmeRI GACNNNNNGTC 2 cut(s) 436, 466
BmeT110I CYCGRG 1 cut(s) 1734
BmgBI CACGTC 2 cut(s) 1252, 1600
BmgT120I GGNCC 3 cut(s) 524, 538, 860
BmiI GGNNCC 2 cut(s) 201, 697
BmrFI CCNGG 2 cut(s) 528, 1279
BmsI GCATC 4 cut(s) 409, 751, 845, 1520
BpiI GAAGAC 1 cut(s) 499
BpuEI CTTGAG 1 cut(s) 1283
Bsa29I ATCGAT 1 cut(s) 228
BsaAI YACGTR 2 cut(s) 604, 1006
BsaI GGTCTC 1 cut(s) 73
BsaJI CCNNGG 8 cut(s) 119, 360, 526, 631, 1277, 1278, 1425, 1677
BsaXI ACNNNNNCTCC 4 cut(s) 100, 130, 1247, 1277
Bse118I RCCGGY 1 cut(s) 1807
Bse1I ACTGG 4 cut(s) 201, 1439, 1504, 1721
BseBI CCWGG 2 cut(s) 528, 1279
BseCI ATCGAT 1 cut(s) 228
BseDI CCNNGG 8 cut(s) 119, 360, 526, 631, 1277, 1278, 1425, 1677
BseGI GGATG 5 cut(s) 22, 608, 1170, 1438, 1614
BseMII CTCAG 2 cut(s) 1176, 1398
BseNI ACTGG 4 cut(s) 201, 1439, 1504, 1721
BseRI GAGGAG 1 cut(s) 1130
BseXI GCAGC 3 cut(s) 340, 368, 1816
BsgI GTGCAG 1 cut(s) 1100
BshFI GGCC 3 cut(s) 525, 1676, 1807
BshVI ATCGAT 1 cut(s) 228
BsiHKAI GWGCWC 2 cut(s) 1458, 1760
BsiHKCI CYCGRG 1 cut(s) 1734
BsiSI CCGG 1 cut(s) 1808
BsmAI GTCTC 4 cut(s) 73, 196, 722, 1606
BsmBI CGTCTC 1 cut(s) 1606
BsnI GGCC 3 cut(s) 525, 1676, 1807
Bso31I GGTCTC 1 cut(s) 73
BsoBI CYCGRG 1 cut(s) 1734
Bsp1286I GDGCHC 2 cut(s) 1458, 1760
Bsp143I GATC 9 cut(s) 3, 199, 290, 348, 1131, 1444, 1479, 1620, 1729
Bsp19I CCATGG 1 cut(s) 631
BspACI CCGC 3 cut(s) 14, 753, 1789
BspANI GGCC 3 cut(s) 525, 1676, 1807
BspCNI CTCAG 2 cut(s) 1177, 1399
BspDI ATCGAT 1 cut(s) 228
BspLI GGNNCC 2 cut(s) 201, 697
BspMAI CTGCAG 2 cut(s) 358, 1866
BspPI GGATC 4 cut(s) 194, 207, 1487, 1724
BspTNI GGTCTC 1 cut(s) 73
BsrFI RCCGGY 1 cut(s) 1807
BsrI ACTGG 4 cut(s) 201, 1439, 1504, 1721
BssAI RCCGGY 1 cut(s) 1807
BssECI CCNNGG 8 cut(s) 119, 360, 526, 631, 1277, 1278, 1425, 1677
BssMI GATC 9 cut(s) 3, 199, 290, 348, 1131, 1444, 1479, 1620, 1729
BssSI CACGAG 2 cut(s) 175, 1648
BssT1I CCWWGG 2 cut(s) 631, 1425
Bst2BI CACGAG 2 cut(s) 175, 1648
Bst2UI CCWGG 2 cut(s) 528, 1279
Bst4CI ACNGT 5 cut(s) 910, 944, 1534, 1544, 1816
Bst6I CTCTTC 2 cut(s) 212, 1862
BstBAI YACGTR 2 cut(s) 604, 1006
BstC8I GCNNGC 4 cut(s) 1245, 1608, 1756, 1809
BstDEI CTNAG 4 cut(s) 620, 1185, 1325, 1407
BstDSI CCRYGG 3 cut(s) 119, 631, 1677
BstF5I GGATG 5 cut(s) 22, 608, 1170, 1438, 1614
BstH2I RGCGCY 1 cut(s) 448
BstHHI GCGC 1 cut(s) 447
BstKTI GATC 9 cut(s) 6, 202, 293, 351, 1134, 1447, 1482, 1623, 1732
BstMAI GTCTC 4 cut(s) 73, 196, 722, 1606
BstMBI GATC 9 cut(s) 3, 199, 290, 348, 1131, 1444, 1479, 1620, 1729
BstMWI GCNNNNNNNGC 3 cut(s) 20, 350, 1673
BstNI CCWGG 2 cut(s) 528, 1279
BstNSI RCATGY 1 cut(s) 1594
BstSCI CCNGG 2 cut(s) 526, 1277
BstSFI CTRYAG 2 cut(s) 354, 1862
BstSNI TACGTA 1 cut(s) 1006
BstV1I GCAGC 3 cut(s) 340, 368, 1816
BstV2I GAAGAC 1 cut(s) 499
BstX2I RGATCY 2 cut(s) 199, 1479
BstXI CCANNNNNNTGG 1 cut(s) 808
BstYI RGATCY 2 cut(s) 199, 1479
Bsu15I ATCGAT 1 cut(s) 228
BsuRI GGCC 3 cut(s) 525, 1676, 1807
BsuTUI ATCGAT 1 cut(s) 228
BtgI CCRYGG 3 cut(s) 119, 631, 1677
BtrI CACGTC 2 cut(s) 1252, 1600
BtsCI GGATG 5 cut(s) 22, 608, 1170, 1438, 1614
BtsIMutI CAGTG 2 cut(s) 194, 456
Cac8I GCNNGC 4 cut(s) 1245, 1608, 1756, 1809
CfoI GCGC 1 cut(s) 447
Cfr10I RCCGGY 1 cut(s) 1807
Cfr13I GGNCC 3 cut(s) 524, 538, 860
ClaI ATCGAT 1 cut(s) 228
CseI GACGC 1 cut(s) 385
Csp6I GTAC 7 cut(s) 689, 1063, 1320, 1334, 1497, 1503, 1714
CviQI GTAC 7 cut(s) 689, 1063, 1320, 1334, 1497, 1503, 1714
DdeI CTNAG 4 cut(s) 620, 1185, 1325, 1407
DpnI GATC 9 cut(s) 5, 201, 292, 350, 1133, 1446, 1481, 1622, 1731
DpnII GATC 9 cut(s) 3, 199, 290, 348, 1131, 1444, 1479, 1620, 1729
DraIII CACNNNGTG 1 cut(s) 1704
DrdI GACNNNNNNGTC 1 cut(s) 1090
DriI GACNNNNNGTC 2 cut(s) 436, 466
DseDI GACNNNNNNGTC 1 cut(s) 1090
EaeI YGGCCR 1 cut(s) 1674
Eam1104I CTCTTC 2 cut(s) 212, 1862
Eam1105I GACNNNNNGTC 2 cut(s) 436, 466
EarI CTCTTC 2 cut(s) 212, 1862
EciI GGCGGA 1 cut(s) 29
Ecl136II GAGCTC 1 cut(s) 1758
Eco105I TACGTA 1 cut(s) 1006
Eco130I CCWWGG 2 cut(s) 631, 1425
Eco24I GRGCYC 1 cut(s) 1760
Eco31I GGTCTC 1 cut(s) 73
Eco32I GATATC 1 cut(s) 304
Eco47I GGWCC 2 cut(s) 538, 860
Eco53kI GAGCTC 1 cut(s) 1758
Eco88I CYCGRG 1 cut(s) 1734
EcoICRI GAGCTC 1 cut(s) 1758
EcoO109I RGGNCCY 1 cut(s) 524
EcoRII CCWGG 2 cut(s) 526, 1277
EcoRV GATATC 1 cut(s) 304
EcoT14I CCWWGG 2 cut(s) 631, 1425
EcoT22I ATGCAT 1 cut(s) 838
EcoT38I GRGCYC 1 cut(s) 1760
ErhI CCWWGG 2 cut(s) 631, 1425
Esp3I CGTCTC 1 cut(s) 1606
FbaI TGATCA 1 cut(s) 3
Fnu4HI GCNGC 3 cut(s) 354, 357, 1830
FokI GGATG 5 cut(s) 29, 595, 1177, 1445, 1601
FriOI GRGCYC 1 cut(s) 1760
Fsp4HI GCNGC 3 cut(s) 354, 357, 1830
FspBI CTAG 2 cut(s) 129, 569
GlaI GCGC 1 cut(s) 446
GluI GCNGC 3 cut(s) 354, 357, 1830
HaeII RGCGCY 1 cut(s) 448
HaeIII GGCC 3 cut(s) 525, 1676, 1807
HapII CCGG 1 cut(s) 1808
HgaI GACGC 1 cut(s) 385
HhaI GCGC 1 cut(s) 447
Hin6I GCGC 1 cut(s) 445
HinP1I GCGC 1 cut(s) 445
HpaII CCGG 1 cut(s) 1808
HphI GGTGA 2 cut(s) 767, 823
Hpy166II GTNNAC 1 cut(s) 126
Hpy188I TCNGA 6 cut(s) 88, 333, 364, 555, 875, 1114
Hpy188III TCNNGA 4 cut(s) 338, 884, 1618, 1736
Hpy8I GTNNAC 1 cut(s) 126
Hpy99I CGWCG 5 cut(s) 379, 1253, 1492, 1730, 1785
HpyAV CCTTC 4 cut(s) 257, 1119, 1460, 1652
HpyCH4III ACNGT 5 cut(s) 910, 944, 1534, 1544, 1816
HpyCH4IV ACGT 5 cut(s) 73, 603, 1005, 1251, 1599
HpyF10VI GCNNNNNNNGC 3 cut(s) 20, 350, 1673
HpyF3I CTNAG 4 cut(s) 620, 1185, 1325, 1407
HpySE526I ACGT 5 cut(s) 73, 603, 1005, 1251, 1599
HspAI GCGC 1 cut(s) 445
KroI GCCGGC 1 cut(s) 1807
KroNI GCCGGC 1 cut(s) 1809
Ksp22I TGATCA 1 cut(s) 3
Kzo9I GATC 9 cut(s) 3, 199, 290, 348, 1131, 1444, 1479, 1620, 1729
LmnI GCTCC 2 cut(s) 695, 1826
Lsp1109I GCAGC 3 cut(s) 340, 368, 1816
LweI GCATC 4 cut(s) 409, 751, 845, 1520
MaeI CTAG 2 cut(s) 129, 569
MaeII ACGT 5 cut(s) 73, 603, 1005, 1251, 1599
MalI GATC 9 cut(s) 5, 201, 292, 350, 1133, 1446, 1481, 1622, 1731
MboI GATC 9 cut(s) 3, 199, 290, 348, 1131, 1444, 1479, 1620, 1729
MfeI CAATTG 2 cut(s) 263, 760
MflI RGATCY 2 cut(s) 199, 1479
MhlI GDGCHC 2 cut(s) 1458, 1760
MmeI TCCRAC 2 cut(s) 56, 1798
Mph1103I ATGCAT 1 cut(s) 838
MroNI GCCGGC 1 cut(s) 1807
MroXI GAANNNNTTC 3 cut(s) 395, 1019, 1262
MseI TTAA 2 cut(s) 645, 1344
MslI CAYNNNNRTG 3 cut(s) 806, 1652, 1769
MspI CCGG 1 cut(s) 1808
MspR9I CCNGG 2 cut(s) 528, 1279
MunI CAATTG 2 cut(s) 263, 760
MvaI CCWGG 2 cut(s) 528, 1279
MwoI GCNNNNNNNGC 3 cut(s) 20, 350, 1673
NaeI GCCGGC 1 cut(s) 1809
NcoI CCATGG 1 cut(s) 631
NdeII GATC 9 cut(s) 3, 199, 290, 348, 1131, 1444, 1479, 1620, 1729
NgoMIV GCCGGC 1 cut(s) 1807
NlaIV GGNNCC 2 cut(s) 201, 697
NmuCI GTSAC 5 cut(s) 755, 811, 998, 1459, 1643
NsiI ATGCAT 1 cut(s) 838
NspI RCATGY 1 cut(s) 1594
OliI CACNNNNGTG 1 cut(s) 1652
PaeR7I CTCGAG 1 cut(s) 1734
PasI CCCWGGG 1 cut(s) 1278
PdiI GCCGGC 1 cut(s) 1809
PdmI GAANNNNTTC 3 cut(s) 395, 1019, 1262
PkrI GCNGC 3 cut(s) 355, 358, 1831
Ppu21I YACGTR 2 cut(s) 604, 1006
Psp124BI GAGCTC 1 cut(s) 1760
Psp1406I AACGTT 1 cut(s) 73
Psp6I CCWGG 2 cut(s) 526, 1277
PspGI CCWGG 2 cut(s) 526, 1277
PspN4I GGNNCC 2 cut(s) 201, 697
PspPI GGNCC 3 cut(s) 524, 538, 860
PstI CTGCAG 2 cut(s) 358, 1866
PsuI RGATCY 2 cut(s) 199, 1479
RsaI GTAC 7 cut(s) 690, 1064, 1321, 1335, 1498, 1504, 1715
RsaNI GTAC 7 cut(s) 689, 1063, 1320, 1334, 1497, 1503, 1714
RseI CAYNNNNRTG 3 cut(s) 806, 1652, 1769
SacI GAGCTC 1 cut(s) 1760
SaqAI TTAA 2 cut(s) 645, 1344
SatI GCNGC 3 cut(s) 354, 357, 1830
Sau3AI GATC 9 cut(s) 3, 199, 290, 348, 1131, 1444, 1479, 1620, 1729
Sau96I GGNCC 3 cut(s) 524, 538, 860
ScaI AGTACT 2 cut(s) 1321, 1498
ScrFI CCNGG 2 cut(s) 528, 1279
SduI GDGCHC 2 cut(s) 1458, 1760
SfaNI GCATC 4 cut(s) 409, 751, 845, 1520
SfcI CTRYAG 2 cut(s) 354, 1862
Sfr274I CTCGAG 1 cut(s) 1734
SinI GGWCC 2 cut(s) 538, 860
SlaI CTCGAG 1 cut(s) 1734
SmiMI CAYNNNNRTG 3 cut(s) 806, 1652, 1769
SmlI CTYRAG 2 cut(s) 1298, 1734
SmoI CTYRAG 2 cut(s) 1298, 1734
SnaBI TACGTA 1 cut(s) 1006
SpeI ACTAGT 1 cut(s) 128
SsiI CCGC 3 cut(s) 14, 753, 1789
SspI AATATT 3 cut(s) 413, 578, 879
SspMI CTAG 2 cut(s) 129, 569
SstI GAGCTC 1 cut(s) 1760
StyD4I CCNGG 2 cut(s) 526, 1277
StyI CCWWGG 2 cut(s) 631, 1425
TaaI ACNGT 5 cut(s) 910, 944, 1534, 1544, 1816
TaiI ACGT 5 cut(s) 76, 606, 1008, 1254, 1602
TaqI TCGA 9 cut(s) 228, 389, 716, 745, 1447, 1490, 1583, 1735, 1783
TatI WGTACW 4 cut(s) 688, 1319, 1496, 1713
Tru1I TTAA 2 cut(s) 645, 1344
Tru9I TTAA 2 cut(s) 645, 1344
TscAI CASTG 2 cut(s) 201, 463
TseFI GTSAC 5 cut(s) 755, 811, 998, 1459, 1643
TseI GCWGC 3 cut(s) 353, 356, 1829
Tsp45I GTSAC 5 cut(s) 755, 811, 998, 1459, 1643
TspDTI ATGAA 8 cut(s) 33, 107, 138, 442, 1169, 1367, 1449, 1575
TspGWI ACGGA 2 cut(s) 108, 1694
TspRI CASTG 2 cut(s) 201, 463
VpaK11BI GGWCC 2 cut(s) 538, 860
XapI RAATTY 7 cut(s) 392, 556, 588, 796, 964, 1015, 1189
XceI RCATGY 1 cut(s) 1594
XhoI CTCGAG 1 cut(s) 1734
XmnI GAANNNNTTC 3 cut(s) 395, 1019, 1262
XspI CTAG 2 cut(s) 129, 569
ZrmI AGTACT 2 cut(s) 1321, 1498
Zsp2I ATGCAT 1 cut(s) 838
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.