Prupe.6G143000_v2.0.a1

voltage-gated potassium channel activity

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Forward (+)
11578593 .. 11579506
914 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G143000.1

Sequence Viewer

Length: 567 bp
ATGAATACACTAAAGAAAGTACCAATGCTTCAAAGCATTGATGAAAGGGTATTGAAAATGATCTGCGACCATCTGAAGCCAGTGATCTACACGGAGAATAGCTATGTGATCCGAGCAGGAGAACCACTTGACTTGATGCTCTTCATCACACAAGGAATTATATGGACCTTTACAGGTACTAGTGCTGGCGATGGTTCTGTACAATTGAATGGCTCTTCTTCCTTGTCATCATCAACATCAATCACAAAGTGTCTTGAGAAAGGCGATTTTTATGGGGAAGAACTTCTAAGCCGAATTTCGACATACATCTCTTTTTCGGACCTTCCTATCTGCACCGAAAATGTGAAATGTCATACAAAAGTAGAAGCCTTTGCTCTGTTGGCCAAGGACTTGAGGAGGGTAGTGTCTGAATTCTGGTGGTATTTCCCCGATTTGAAGAATTCCGAGTTAAAGGAGAAATCGGCACTTTCTTCCCTGCGAGCAGTCCGTCAACGAAATCGATCAAAGAAGGAGGCTACACTGCCTCCTAAGTCTGATGCTGATCGAGAACAAATGCCCGCAAATTAA

Protein Analysis

189

Amino Acids

21.2

Weight (kDa)

8.3

Isoelectric Point (pI)

44.17

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000119)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g10570 FvH4_4g36390 FvH4_7g31840 FvH4_7g31840 FvH4_7g31850 FvH4_7g31850 FvH4_7g31861 FvH4_7g31861 FvH4_7g31950
malus_domestica MD01G1054600.v1.1 MD01G1221100.v1.1 MD01G1221400.v1.1 MD01G1221600.v1.1 MD01G1221800.v1.1 MD01G1222000.v1.1 MD01G1222100.v1.1 MD07G1140800.v1.1 MD07G1291200.v1.1 MD07G1291400.v1.1 MD07G1291500.v1.1 MD07G1291700.v1.1 MD07G1292500.v1.1 MD07G1292700.v1.1 MD07G1292800.v1.1 MD07G1292900.v1.1 MD08G1241600.v1.1 MD11G1083800.v1.1 MD15G1431600.v1.1
prunus_persica Prupe.1G017800_v2.0.a1 Prupe.1G017800_v2.0.a1 Prupe.1G162800_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312700_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G143000_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1
pyrus_communis pycom01g23050 pycom01g23070 pycom01g23090 pycom01g23100 pycom01g23110 pycom01g23120 pycom01g23170 pycom07g26410 pycom07g26440 pycom07g26470 pycom07g26480 pycom07g26490 pycom07g26500 pycom07g26510 pycom07g26530 pycom07g26540 pycom07g26570 pycom07g26580 pycom07g26590 pycom08g20940
rosa_chinensis RchiOBHm_Chr1g0324571 RchiOBHm_Chr1g0336181 RchiOBHm_Chr1g0381061 RchiOBHm_Chr1g0381091 RchiOBHm_Chr1g0381121 RchiOBHm_Chr1g0381131 RchiOBHm_Chr1g0381141 RchiOBHm_Chr1g0381161 RchiOBHm_Chr1g0381211 RchiOBHm_Chr2g0110361 RchiOBHm_Chr2g0120231 RchiOBHm_Chr3g0486281 RchiOBHm_Chr3g0486311 RchiOBHm_Chr3g0486401 RchiOBHm_Chr4g0409511 RchiOBHm_Chr4g0409521 RchiOBHm_Chr5g0017271 RchiOBHm_Chr5g0048781 RchiOBHm_Chr5g0048811
rosa_laevigata RLG00000002401 RLG00000008559 RLG00000017798 RLG00000017799 RLG00000023082 RLG00000023088 RLG00000026230 RLG00000026238 RLG00000026240 RLG00000026241 RLG00000026242 RLG00000026243 RLG00000026244 RLG00000026246 RLG00000026247 RLG00000026248 RLG00000029876 RLG00000030189 RLG00000034579
rosa_multiflora Rmu_co8101374.1_g000001 Rmu_co8309149.1_g000001 Rmu_co8450063.1_g000001 Rmu_sc0000441.1_g000094 Rmu_sc0000479.1_g000005 Rmu_sc0000647.1_g000006 Rmu_sc0001393.1_g000031 Rmu_sc0001423.1_g000037 Rmu_sc0001616.1_g000015 Rmu_sc0001857.1_g000011 Rmu_sc0002183.1_g000013 Rmu_sc0002183.1_g000028 Rmu_sc0002183.1_g000030 Rmu_sc0002688.1_g000003 Rmu_sc0002688.1_g000020 Rmu_sc0003801.1_g000003 Rmu_sc0003801.1_g000004 Rmu_sc0004125.1_g000006 Rmu_sc0004494.1_g000005 Rmu_sc0004494.1_g000006 Rmu_sc0004494.1_g000008 Rmu_sc0004494.1_g000009 Rmu_sc0005842.1_g000004 Rmu_sc0006872.1_g000001 Rmu_sc0006872.1_g000005 Rmu_sc0006872.1_g000009 Rmu_sc0006872.1_g000010 Rmu_sc0008053.1_g000026
rosa_roxburghii Rroxscaffold_159G00432960 Rroxscaffold_1G00033060 Rroxscaffold_2G00123150 Rroxscaffold_2G00123170 Rroxscaffold_2G00133500 Rroxscaffold_2G00133550 Rroxscaffold_4G00278650 Rroxscaffold_4G00278750 Rroxscaffold_4G00278790 Rroxscaffold_4G00278800 Rroxscaffold_4G00278810 Rroxscaffold_4G00325390 Rroxscaffold_5G00354010 Rroxscaffold_6G00395890 Rroxscaffold_6G00395900 Rroxscaffold_6G00395920
rosa_rugosa Rorug01G0046900.1 Rorug01G0427000 Rorug01G0427100 Rorug01G0427200 Rorug01G0427300 Rorug01G0427400 Rorug01G0427500 Rorug01G0427500 Rorug01G0427600 Rorug01G0427600 Rorug01G0427700 Rorug01G0427700 Rorug01G0427800 Rorug01G0428700 Rorug02G0166400 Rorug02G0166500 Rorug02G0166500 Rorug02G0166600 Rorug02G0166600 Rorug02G0166700 Rorug02G0167300 Rorug02G0167300 Rorug02G0167300 Rorug03G0224600 Rorug03G0224600 Rorug04G0094400 Rorug05G0241100 Rorug05G0241200
rosa_samantha Rh1BG407700 Rh1BG407900 Rh1BG409000 Rh1CG064700 Rh1CG420900 Rh1CG421000 Rh1CG421200 Rh1CG421300 Rh1CG421800 Rh1CG421900 Rh1CG422000 Rh1CG422200 Rh1CG422300 Rh1CG423600 Rh1DG437600 Rh1DG438900 Rh1DG439000 Rh1DG440300 Rh2AG219100 Rh2CG220700 Rh2DG225300 Rh3AG274400 Rh3AG274600 Rh3CG308900 Rh3DG305800 Rh4AG156400 Rh5AG129000 Rh5AG320900 Rh5CG139600
rosa_wichuraiana Rw1G005300 Rw1G039280 Rw1G039300 Rw1G039310 Rw1G039320 Rw1G039330 Rw1G039340 Rw1G039360 Rw1G039390 Rw2G016910 Rw2G022800 Rw3G024330 Rw3G024340 Rw3G024350 Rw3G024400 Rw4G012810 Rw5G030120 Rw5G030280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 558
AclWI GGATC 1 cut(s) 103
AcoI YGGCCR 1 cut(s) 381
AcsI RAATTY 3 cut(s) 294, 410, 439
AcuI CTGAAG 1 cut(s) 95
AdeI CACNNNGTG 1 cut(s) 249
AfaI GTAC 3 cut(s) 21, 178, 201
AgsI TTSAA 4 cut(s) 32, 55, 208, 436
AhlI ACTAGT 1 cut(s) 179
AluBI AGCT 1 cut(s) 102
AluI AGCT 1 cut(s) 102
AlwI GGATC 1 cut(s) 103
AoxI GGCC 1 cut(s) 381
ApoI RAATTY 3 cut(s) 294, 410, 439
Asp700I GAANNNNTTC 1 cut(s) 282
AspS9I GGNCC 2 cut(s) 165, 319
AvaII GGWCC 2 cut(s) 165, 319
BalI TGGCCA 1 cut(s) 383
BarI GAAGNNNNNNTAC 2 cut(s) 12, 44
BccI CCATC 2 cut(s) 78, 185
BcuI ACTAGT 1 cut(s) 179
BfaI CTAG 1 cut(s) 180
Bme18I GGWCC 2 cut(s) 165, 319
BmgT120I GGNCC 2 cut(s) 165, 319
BmsI GCATC 2 cut(s) 126, 526
BpuEI CTTGAG 2 cut(s) 275, 412
Bsa29I ATCGAT 1 cut(s) 499
BsaBI GATNNNNATC 1 cut(s) 540
BsaJI CCNNGG 1 cut(s) 384
BsaXI ACNNNNNCTCC 2 cut(s) 508, 538
Bse1I ACTGG 1 cut(s) 80
Bse8I GATNNNNATC 1 cut(s) 540
BseCI ATCGAT 1 cut(s) 499
BseDI CCNNGG 1 cut(s) 384
BseJI GATNNNNATC 1 cut(s) 540
BseNI ACTGG 1 cut(s) 80
BseRI GAGGAG 1 cut(s) 409
BsgI GTGCAG 1 cut(s) 316
BshFI GGCC 1 cut(s) 383
BshVI ATCGAT 1 cut(s) 499
BsnI GGCC 1 cut(s) 383
Bsp1407I TGTACA 1 cut(s) 199
Bsp143I GATC 5 cut(s) 60, 84, 108, 500, 541
BspACI CCGC 1 cut(s) 558
BspANI GGCC 1 cut(s) 383
BspDI ATCGAT 1 cut(s) 499
BspPI GGATC 1 cut(s) 103
BspQI GCTCTTC 2 cut(s) 146, 220
BsrGI TGTACA 1 cut(s) 199
BsrI ACTGG 1 cut(s) 80
BssECI CCNNGG 1 cut(s) 384
BssMI GATC 5 cut(s) 60, 84, 108, 500, 541
BssT1I CCWWGG 1 cut(s) 384
Bst6I CTCTTC 2 cut(s) 146, 220
BstAUI TGTACA 1 cut(s) 199
BstC8I GCNNGC 3 cut(s) 187, 480, 558
BstDEI CTNAG 2 cut(s) 287, 528
BstKTI GATC 5 cut(s) 63, 87, 111, 503, 544
BstMBI GATC 5 cut(s) 60, 84, 108, 500, 541
BstMWI GCNNNNNNNGC 1 cut(s) 380
Bsu15I ATCGAT 1 cut(s) 499
BsuRI GGCC 1 cut(s) 383
BsuTUI ATCGAT 1 cut(s) 499
BtgZI GCGATG 1 cut(s) 204
BtsI GCAGTG 1 cut(s) 518
BtsIMutI CAGTG 2 cut(s) 87, 518
Cac8I GCNNGC 3 cut(s) 187, 480, 558
Cfr13I GGNCC 2 cut(s) 165, 319
ClaI ATCGAT 1 cut(s) 499
Csp6I GTAC 3 cut(s) 20, 177, 200
CspCI CAANNNNNGTGG 2 cut(s) 114, 149
CviJI RGCY 7 cut(s) 79, 102, 213, 291, 368, 383, 515
CviKI_1 RGCY 7 cut(s) 79, 102, 213, 291, 368, 383, 515
CviQI GTAC 3 cut(s) 20, 177, 200
DdeI CTNAG 2 cut(s) 287, 528
DpnI GATC 5 cut(s) 62, 86, 110, 502, 543
DpnII GATC 5 cut(s) 60, 84, 108, 500, 541
DraIII CACNNNGTG 1 cut(s) 249
EaeI YGGCCR 1 cut(s) 381
Eam1104I CTCTTC 2 cut(s) 146, 220
EarI CTCTTC 2 cut(s) 146, 220
Eco130I CCWWGG 1 cut(s) 384
Eco47I GGWCC 2 cut(s) 165, 319
Eco57I CTGAAG 1 cut(s) 95
EcoRI GAATTC 2 cut(s) 410, 439
EcoT14I CCWWGG 1 cut(s) 384
ErhI CCWWGG 1 cut(s) 384
FaiI YATR 6 cut(s) 105, 161, 163, 273, 304, 354
FauI CCCGC 1 cut(s) 565
FspBI CTAG 1 cut(s) 180
HaeIII GGCC 1 cut(s) 383
HincII GTYRAC 1 cut(s) 491
HindII GTYRAC 1 cut(s) 491
Hpy166II GTNNAC 1 cut(s) 491
Hpy188I TCNGA 6 cut(s) 75, 113, 319, 409, 445, 535
Hpy188III TCNNGA 2 cut(s) 254, 545
Hpy8I GTNNAC 1 cut(s) 491
HpyAV CCTTC 2 cut(s) 332, 502
HpyCH4V TGCA 1 cut(s) 333
HpyF10VI GCNNNNNNNGC 1 cut(s) 380
HpyF3I CTNAG 2 cut(s) 287, 528
Kzo9I GATC 5 cut(s) 60, 84, 108, 500, 541
LguI GCTCTTC 2 cut(s) 146, 220
LpnPI CCDG 6 cut(s) 93, 102, 159, 171, 400, 488
LweI GCATC 2 cut(s) 126, 526
MaeI CTAG 1 cut(s) 180
MalI GATC 5 cut(s) 62, 86, 110, 502, 543
MboI GATC 5 cut(s) 60, 84, 108, 500, 541
MboII GAAGA 6 cut(s) 133, 207, 210, 290, 448, 462
MfeI CAATTG 1 cut(s) 203
MlsI TGGCCA 1 cut(s) 383
MluCI AATT 6 cut(s) 156, 203, 294, 410, 439, 562
MluNI TGGCCA 1 cut(s) 383
MnlI CCTC 4 cut(s) 387, 390, 505, 534
Mox20I TGGCCA 1 cut(s) 383
MroXI GAANNNNTTC 1 cut(s) 282
MscI TGGCCA 1 cut(s) 383
MseI TTAA 2 cut(s) 449, 565
Msp20I TGGCCA 1 cut(s) 383
MunI CAATTG 1 cut(s) 203
MwoI GCNNNNNNNGC 1 cut(s) 380
NdeII GATC 5 cut(s) 60, 84, 108, 500, 541
PciSI GCTCTTC 2 cut(s) 146, 220
PdmI GAANNNNTTC 1 cut(s) 282
PspPI GGNCC 2 cut(s) 165, 319
RsaI GTAC 3 cut(s) 21, 178, 201
RsaNI GTAC 3 cut(s) 20, 177, 200
SapI GCTCTTC 2 cut(s) 146, 220
SaqAI TTAA 2 cut(s) 449, 565
Sau3AI GATC 5 cut(s) 60, 84, 108, 500, 541
Sau96I GGNCC 2 cut(s) 165, 319
SetI ASST 4 cut(s) 104, 170, 178, 324
SfaNI GCATC 2 cut(s) 126, 526
SinI GGWCC 2 cut(s) 165, 319
SmlI CTYRAG 2 cut(s) 254, 391
SmoI CTYRAG 2 cut(s) 254, 391
SpeI ACTAGT 1 cut(s) 179
Sse9I AATT 6 cut(s) 156, 203, 294, 410, 439, 562
SsiI CCGC 1 cut(s) 558
SspMI CTAG 1 cut(s) 180
StyI CCWWGG 1 cut(s) 384
TaqI TCGA 3 cut(s) 299, 499, 544
TasI AATT 6 cut(s) 156, 203, 294, 410, 439, 562
TatI WGTACW 1 cut(s) 199
Tru1I TTAA 2 cut(s) 449, 565
Tru9I TTAA 2 cut(s) 449, 565
TscAI CASTG 2 cut(s) 87, 525
TspDTI ATGAA 3 cut(s) 17, 57, 133
TspGWI ACGGA 2 cut(s) 107, 476
TspRI CASTG 2 cut(s) 87, 525
VpaK11BI GGWCC 2 cut(s) 165, 319
XapI RAATTY 3 cut(s) 294, 410, 439
XmnI GAANNNNTTC 1 cut(s) 282
XspI CTAG 1 cut(s) 180
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.