FvH4_7g31840

Cyclic nucleotide-gated ion channel 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0000119
Physical Location & Seq
Reverse (-)
22968639 .. 22971996
3358 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g31840.t1

Sequence Viewer

Length: 1953 bp
ATGTCTAAACATCAGGGACCATACGATGAGAGCATCATCGAAATGAGCCTTACACCAGGTATAGCTTATGATTTCAGCAGTCCTGAGGCTCTATTGCAACGTCGAATACCAACACCCGAACCTGGACAACCTCAAGCAAGCAACAAAATCTGGAAAAGGCCAACACTAATTGAGGGAGTTCTTTCAGATTTGAACCCATGGTGGAATAAGATACTCGTAACTTCATGCGTGATTGCAGTCTTATTTGATCCCTTGTTCTTTTACATTCCATACACCAGCGAGGAAAAAAAGTGTATGGGAAGCGACAACGGAGTGCAGACAGCAGCTCTGGTTTTCCGATCAGTCACGGACATCGCTTTCCTAGTGAATATCATATACCAACTTCATGTGGCTATCAAATTTGCAGCCTCAAAGGTTTCGGAGGATAAGACTTCGGTTTTGAAATATGAATCTGTATCCCGAGATCAAATGATTCAGTTTGCAAAGGCATTTTCTCACAAGTTGTCATGGCGATCTTTCCTAACTGACGTTATCGCTATTTTTCCCATGCCACAACTGCTGATAGTAGGATTGTTTTTCGACATTGGAGGCCATAACTACCTGTTAAGAAGAAAGATTGTGAGTGGTTTTCTTCTAGTCCACTATGTGCCAAGAATTTATCGAATCTATCTTTCCTCTGTCGCGATTGCACAATCTGCATTATGGGTTAAAGGTGTATTCAATTTGTTTCTCTACATCCTTGCGAGTCATGTATTGGGAGCCTTTTGGTACTTTTTTTCTATTCAGCGAGAGATATCATGTTGGTATCGAACTTGCCTCGATACAAATCGATCAGAATCAGGATGCACTTTTTATTGCCATGACAGTACTGCTTCTGCACTTATAACCCCAGAATTCAATAAAACTCTAGACGAGAAATGCATTCTAAAAGTTCCATATAATATGACTGATCCCCCATTTGATTTTGGAATATTTTTTGATGCCCTCAAGAATGATATCCAAGGGAAAATAAATGTTCCACAAAAGATTGGTTACTGTTTCTGGTGGGGCTTGCGAAACTTGAGTAATTTTGGCACAAGTTTGGAAACAAGTACCTATCTGTGGGAAAACAGCTTTGCAATTCTTATTTCTATCATCGGCTTGCTATTGTTTTTATACCTCATTGGAAATCTACAGATTTATATGGAGAAGGCAACTACTAGAGCTGAGGAGGTAAGAGAGAAGATTCAGAAAAAAAGGAACGACATAGAAAAGTGGATGGTAAGAAATGAGCTCGAGGAAGACATGAAGGACGAGATCATGAAAAACATCAAGCAAAAACTGGAAGAAGACATAACAGTAGATCTGGAGGATATAGTCTCTATTCTTCCCTGGTATACCAAGAAAGCTCTCAAGCGAGTTCTTTGCATGAGTACGCTAAGAAGAGTACCAATGCTTAGCAAGGTGGATGAAAAAGTTTTGAAGATGATGTGCGACTATCTGAAGCCGGTGATTTACCAGGAGAATGACATTGTTTTTCAGATGGAAGAGCCACTTGATCGAATGGTGTTCATTACAGAAGGGTTTATGTGGACTTACACGACTGCTATTGAGAGTAGTCATTTTGTTAAAACAACAGGAATCGCTACTTCTCCATCCATGGATACTCACTTCCTCAAGAAGGGTGATTCTTATGGACACGTTCTTCTGCAATTTGCATCATCGTCTCTTACGGCGCTTCCTACCTCAACCGCAAATGTCAAATGCCACACGAAGGTAGAGGCGTTTGTACTCATGGCCAAGGACTTGAAGAACATGGTAACCAAATGCGAAAAATATTGGCCTTTCGACTACAATCCTTCTAAAGATGAGGCGGCGGATCAGGTGGCGCCGCTGGGGCAGTTTCAGCAACAACAATTGTCAAAGAAGCGTGTAGCAGCATCAAATATCAATCCCACCGGCTACAGTGGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
Ion_trans cNMP_binding

Protein Analysis

651

Amino Acids

74.57

Weight (kDa)

7.84

Isoelectric Point (pI)

49.02

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000119)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g10570 FvH4_4g36390 FvH4_7g31840 FvH4_7g31840 FvH4_7g31850 FvH4_7g31850 FvH4_7g31861 FvH4_7g31861 FvH4_7g31950
malus_domestica MD01G1054600.v1.1 MD01G1221100.v1.1 MD01G1221400.v1.1 MD01G1221600.v1.1 MD01G1221800.v1.1 MD01G1222000.v1.1 MD01G1222100.v1.1 MD07G1140800.v1.1 MD07G1291200.v1.1 MD07G1291400.v1.1 MD07G1291500.v1.1 MD07G1291700.v1.1 MD07G1292500.v1.1 MD07G1292700.v1.1 MD07G1292800.v1.1 MD07G1292900.v1.1 MD08G1241600.v1.1 MD11G1083800.v1.1 MD15G1431600.v1.1
prunus_persica Prupe.1G017800_v2.0.a1 Prupe.1G017800_v2.0.a1 Prupe.1G162800_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312700_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G143000_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1
pyrus_communis pycom01g23050 pycom01g23070 pycom01g23090 pycom01g23100 pycom01g23110 pycom01g23120 pycom01g23170 pycom07g26410 pycom07g26440 pycom07g26470 pycom07g26480 pycom07g26490 pycom07g26500 pycom07g26510 pycom07g26530 pycom07g26540 pycom07g26570 pycom07g26580 pycom07g26590 pycom08g20940
rosa_chinensis RchiOBHm_Chr1g0324571 RchiOBHm_Chr1g0336181 RchiOBHm_Chr1g0381061 RchiOBHm_Chr1g0381091 RchiOBHm_Chr1g0381121 RchiOBHm_Chr1g0381131 RchiOBHm_Chr1g0381141 RchiOBHm_Chr1g0381161 RchiOBHm_Chr1g0381211 RchiOBHm_Chr2g0110361 RchiOBHm_Chr2g0120231 RchiOBHm_Chr3g0486281 RchiOBHm_Chr3g0486311 RchiOBHm_Chr3g0486401 RchiOBHm_Chr4g0409511 RchiOBHm_Chr4g0409521 RchiOBHm_Chr5g0017271 RchiOBHm_Chr5g0048781 RchiOBHm_Chr5g0048811
rosa_laevigata RLG00000002401 RLG00000008559 RLG00000017798 RLG00000017799 RLG00000023082 RLG00000023088 RLG00000026230 RLG00000026238 RLG00000026240 RLG00000026241 RLG00000026242 RLG00000026243 RLG00000026244 RLG00000026246 RLG00000026247 RLG00000026248 RLG00000029876 RLG00000030189 RLG00000034579
rosa_multiflora Rmu_co8101374.1_g000001 Rmu_co8309149.1_g000001 Rmu_co8450063.1_g000001 Rmu_sc0000441.1_g000094 Rmu_sc0000479.1_g000005 Rmu_sc0000647.1_g000006 Rmu_sc0001393.1_g000031 Rmu_sc0001423.1_g000037 Rmu_sc0001616.1_g000015 Rmu_sc0001857.1_g000011 Rmu_sc0002183.1_g000013 Rmu_sc0002183.1_g000028 Rmu_sc0002183.1_g000030 Rmu_sc0002688.1_g000003 Rmu_sc0002688.1_g000020 Rmu_sc0003801.1_g000003 Rmu_sc0003801.1_g000004 Rmu_sc0004125.1_g000006 Rmu_sc0004494.1_g000005 Rmu_sc0004494.1_g000006 Rmu_sc0004494.1_g000008 Rmu_sc0004494.1_g000009 Rmu_sc0005842.1_g000004 Rmu_sc0006872.1_g000001 Rmu_sc0006872.1_g000005 Rmu_sc0006872.1_g000009 Rmu_sc0006872.1_g000010 Rmu_sc0008053.1_g000026
rosa_roxburghii Rroxscaffold_159G00432960 Rroxscaffold_1G00033060 Rroxscaffold_2G00123150 Rroxscaffold_2G00123170 Rroxscaffold_2G00133500 Rroxscaffold_2G00133550 Rroxscaffold_4G00278650 Rroxscaffold_4G00278750 Rroxscaffold_4G00278790 Rroxscaffold_4G00278800 Rroxscaffold_4G00278810 Rroxscaffold_4G00325390 Rroxscaffold_5G00354010 Rroxscaffold_6G00395890 Rroxscaffold_6G00395900 Rroxscaffold_6G00395920
rosa_rugosa Rorug01G0046900.1 Rorug01G0427000 Rorug01G0427100 Rorug01G0427200 Rorug01G0427300 Rorug01G0427400 Rorug01G0427500 Rorug01G0427500 Rorug01G0427600 Rorug01G0427600 Rorug01G0427700 Rorug01G0427700 Rorug01G0427800 Rorug01G0428700 Rorug02G0166400 Rorug02G0166500 Rorug02G0166500 Rorug02G0166600 Rorug02G0166600 Rorug02G0166700 Rorug02G0167300 Rorug02G0167300 Rorug02G0167300 Rorug03G0224600 Rorug03G0224600 Rorug04G0094400 Rorug05G0241100 Rorug05G0241200
rosa_samantha Rh1BG407700 Rh1BG407900 Rh1BG409000 Rh1CG064700 Rh1CG420900 Rh1CG421000 Rh1CG421200 Rh1CG421300 Rh1CG421800 Rh1CG421900 Rh1CG422000 Rh1CG422200 Rh1CG422300 Rh1CG423600 Rh1DG437600 Rh1DG438900 Rh1DG439000 Rh1DG440300 Rh2AG219100 Rh2CG220700 Rh2DG225300 Rh3AG274400 Rh3AG274600 Rh3CG308900 Rh3DG305800 Rh4AG156400 Rh5AG129000 Rh5AG320900 Rh5CG139600
rosa_wichuraiana Rw1G005300 Rw1G039280 Rw1G039300 Rw1G039310 Rw1G039320 Rw1G039330 Rw1G039340 Rw1G039360 Rw1G039390 Rw2G016910 Rw2G022800 Rw3G024330 Rw3G024340 Rw3G024350 Rw3G024400 Rw4G012810 Rw5G030120 Rw5G030280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 884
AccB1I GGYRCC 1 cut(s) 1867
AccI GTMKAC 1 cut(s) 1376
AccII CGCG 1 cut(s) 683
AciI CCGC 4 cut(s) 1731, 1853, 1856, 1871
AclWI GGATC 3 cut(s) 242, 944, 1866
AcoI YGGCCR 1 cut(s) 1776
AcsI RAATTY 3 cut(s) 398, 654, 893
AcuI CTGAAG 1 cut(s) 1502
AcyI GRCGYC 1 cut(s) 1868
AdeI CACNNNGTG 1 cut(s) 646
AfaI GTAC 6 cut(s) 770, 868, 1093, 1414, 1428, 1770
AfiI CCNNNNNNNGG 4 cut(s) 122, 1101, 1660, 1753
AflIII ACRYGT 1 cut(s) 1678
AgsI TTSAA 6 cut(s) 193, 442, 721, 898, 1462, 1789
AjnI CCWGG 4 cut(s) 55, 121, 1370, 1497
AluBI AGCT 6 cut(s) 65, 326, 1113, 1205, 1273, 1388
AluI AGCT 6 cut(s) 65, 326, 1113, 1205, 1273, 1388
Alw21I GWGCWC 1 cut(s) 1275
Alw26I GTCTC 2 cut(s) 1363, 1710
AlwI GGATC 3 cut(s) 242, 944, 1866
Ama87I CYCGRG 2 cut(s) 459, 1274
AoxI GGCC 4 cut(s) 158, 589, 1776, 1820
ApeKI GCWGC 3 cut(s) 323, 404, 1916
ApoI RAATTY 3 cut(s) 398, 654, 893
ArsI GACNNNNNNTTYG 2 cut(s) 421, 453
AspLEI GCGC 2 cut(s) 1717, 1870
AspS9I GGNCC 1 cut(s) 17
AsuHPI GGTGA 2 cut(s) 1501, 1676
AvaI CYCGRG 2 cut(s) 459, 1274
AvaII GGWCC 1 cut(s) 17
AxyI CCTNAGG 1 cut(s) 84
BalI TGGCCA 1 cut(s) 1778
BanI GGYRCC 1 cut(s) 1867
BanII GRGCYC 1 cut(s) 1275
BbsI GAAGAC 2 cut(s) 1287, 1335
Bbv12I GWGCWC 1 cut(s) 1275
BbvCI CCTCAGC 1 cut(s) 1206
BbvI GCAGC 3 cut(s) 335, 416, 1928
BccI CCATC 3 cut(s) 1252, 1516, 1642
BceAI ACGGC 1 cut(s) 1728
BcgI CGANNNNNNTGC 2 cut(s) 1386, 1420
BciT130I CCWGG 4 cut(s) 57, 123, 1372, 1499
BciVI GTATCC 2 cut(s) 466, 1636
BcoDI GTCTC 2 cut(s) 1363, 1710
BfaI CTAG 4 cut(s) 362, 635, 908, 1200
BfmI CTRYAG 2 cut(s) 1172, 1942
BfoI RGCGCY 2 cut(s) 1718, 1871
BfuI GTATCC 2 cut(s) 466, 1636
BglI GCCNNNNNGGC 1 cut(s) 1876
BglII AGATCT 1 cut(s) 1342
BisI GCNGC 5 cut(s) 324, 405, 1854, 1871, 1917
BlpI GCTNAGC 1 cut(s) 1436
BlsI GCNGC 5 cut(s) 325, 406, 1855, 1872, 1918
BmcAI AGTACT 1 cut(s) 868
Bme1390I CCNGG 4 cut(s) 57, 123, 1372, 1499
Bme18I GGWCC 1 cut(s) 17
BmeT110I CYCGRG 2 cut(s) 459, 1274
BmgT120I GGNCC 1 cut(s) 17
BmiI GGNNCC 3 cut(s) 18, 760, 1869
BmrFI CCNGG 4 cut(s) 57, 123, 1372, 1499
BmsI GCATC 5 cut(s) 42, 833, 970, 1706, 1928
BpiI GAAGAC 2 cut(s) 1287, 1335
BpmI CTGGAG 1 cut(s) 1367
Bpu10I CCTNAGC 1 cut(s) 1206
Bpu1102I GCTNAGC 1 cut(s) 1436
BpuEI CTTGAG 5 cut(s) 117, 971, 1081, 1376, 1640
Bsa29I ATCGAT 1 cut(s) 829
BsaBI GATNNNNATC 2 cut(s) 825, 835
BsaHI GRCGYC 1 cut(s) 1868
BsaJI CCNNGG 5 cut(s) 197, 1000, 1370, 1638, 1779
Bsc4I CCNNNNNNNGG 4 cut(s) 122, 1101, 1660, 1753
Bse118I RCCGGY 2 cut(s) 1486, 1937
Bse1I ACTGG 1 cut(s) 1326
Bse21I CCTNAGG 1 cut(s) 84
Bse8I GATNNNNATC 2 cut(s) 825, 835
BseBI CCWGG 4 cut(s) 57, 123, 1372, 1499
BseCI ATCGAT 1 cut(s) 829
BseDI CCNNGG 5 cut(s) 197, 1000, 1370, 1638, 1779
BseGI GGATG 5 cut(s) 735, 848, 1263, 1453, 1634
BseJI GATNNNNATC 2 cut(s) 825, 835
BseLI CCNNNNNNNGG 4 cut(s) 122, 1101, 1660, 1753
BseMII CTCAG 2 cut(s) 75, 1197
BseNI ACTGG 1 cut(s) 1326
BseRI GAGGAG 1 cut(s) 1223
BseXI GCAGC 3 cut(s) 335, 416, 1928
BseYI CCCAGC 1 cut(s) 1873
BsgI GTGCAG 2 cut(s) 335, 861
Bsh1236I CGCG 1 cut(s) 683
BshFI GGCC 4 cut(s) 160, 591, 1778, 1822
BshNI GGYRCC 1 cut(s) 1867
BshVI ATCGAT 1 cut(s) 829
BsiHKAI GWGCWC 1 cut(s) 1275
BsiHKCI CYCGRG 2 cut(s) 459, 1274
BsiSI CCGG 2 cut(s) 1487, 1938
BslFI GGGAC 1 cut(s) 30
BslI CCNNNNNNNGG 4 cut(s) 122, 1101, 1660, 1753
BsmAI GTCTC 2 cut(s) 1363, 1710
BsmBI CGTCTC 1 cut(s) 1710
BsmFI GGGAC 1 cut(s) 30
BsmI GAATGC 1 cut(s) 921
BsnI GGCC 4 cut(s) 160, 591, 1778, 1822
BsoBI CYCGRG 2 cut(s) 459, 1274
Bsp1286I GDGCHC 1 cut(s) 1275
Bsp1720I GCTNAGC 1 cut(s) 1436
Bsp19I CCATGG 2 cut(s) 197, 1638
Bsp68I TCGCGA 1 cut(s) 683
BspACI CCGC 4 cut(s) 1731, 1853, 1856, 1871
BspANI GGCC 4 cut(s) 160, 591, 1778, 1822
BspCNI CTCAG 2 cut(s) 76, 1198
BspDI ATCGAT 1 cut(s) 829
BspFNI CGCG 1 cut(s) 683
BspHI TCATGA 1 cut(s) 1299
BspLI GGNNCC 3 cut(s) 18, 760, 1869
BspPI GGATC 3 cut(s) 242, 944, 1866
BspQI GCTCTTC 1 cut(s) 1521
BspT107I GGYRCC 1 cut(s) 1867
BsrFI RCCGGY 2 cut(s) 1486, 1937
BsrI ACTGG 1 cut(s) 1326
BssAI RCCGGY 2 cut(s) 1486, 1937
BssECI CCNNGG 5 cut(s) 197, 1000, 1370, 1638, 1779
BssNAI GTATAC 1 cut(s) 1377
BssNI GRCGYC 1 cut(s) 1868
BssT1I CCWWGG 4 cut(s) 197, 1000, 1638, 1779
Bst1107I GTATAC 1 cut(s) 1377
Bst2UI CCWGG 4 cut(s) 57, 123, 1372, 1499
Bst4CI ACNGT 4 cut(s) 866, 1037, 1339, 1946
Bst6I CTCTTC 2 cut(s) 1417, 1521
BstACI GRCGYC 1 cut(s) 1868
BstAPI GCANNNNNTGC 1 cut(s) 695
BstC8I GCNNGC 3 cut(s) 139, 1052, 1142
BstDEI CTNAG 4 cut(s) 84, 1206, 1418, 1436
BstDSI CCRYGG 2 cut(s) 197, 1638
BstEII GGTNACC 1 cut(s) 1798
BstENI CCTNNNNNAGG 1 cut(s) 1658
BstF5I GGATG 5 cut(s) 735, 848, 1263, 1453, 1634
BstFNI CGCG 1 cut(s) 683
BstH2I RGCGCY 2 cut(s) 1718, 1871
BstHHI GCGC 2 cut(s) 1717, 1870
BstMAI GTCTC 2 cut(s) 1363, 1710
BstMWI GCNNNNNNNGC 4 cut(s) 556, 695, 1876, 1885
BstNI CCWGG 4 cut(s) 57, 123, 1372, 1499
BstPI GGTNACC 1 cut(s) 1798
BstSCI CCNGG 4 cut(s) 55, 121, 1370, 1497
BstSFI CTRYAG 2 cut(s) 1172, 1942
BstUI CGCG 1 cut(s) 683
BstV1I GCAGC 3 cut(s) 335, 416, 1928
BstV2I GAAGAC 2 cut(s) 1287, 1335
BstX2I RGATCY 1 cut(s) 1342
BstYI RGATCY 1 cut(s) 1342
BstZ17I GTATAC 1 cut(s) 1377
Bsu15I ATCGAT 1 cut(s) 829
Bsu36I CCTNAGG 1 cut(s) 84
BsuI GTATCC 2 cut(s) 466, 1636
BsuRI GGCC 4 cut(s) 160, 591, 1778, 1822
BsuTUI ATCGAT 1 cut(s) 829
BtgI CCRYGG 2 cut(s) 197, 1638
BtgZI GCGATG 1 cut(s) 337
BtsCI GGATG 5 cut(s) 735, 848, 1263, 1453, 1634
BtsIMutI CAGTG 1 cut(s) 1951
BtuMI TCGCGA 1 cut(s) 683
Cac8I GCNNGC 3 cut(s) 139, 1052, 1142
CciI TCATGA 1 cut(s) 1299
CfoI GCGC 2 cut(s) 1717, 1870
Cfr10I RCCGGY 2 cut(s) 1486, 1937
Cfr13I GGNCC 1 cut(s) 17
ClaI ATCGAT 1 cut(s) 829
CsiI ACCWGGT 1 cut(s) 55
Csp6I GTAC 6 cut(s) 769, 867, 1092, 1413, 1427, 1769
CviQI GTAC 6 cut(s) 769, 867, 1092, 1413, 1427, 1769
DdeI CTNAG 4 cut(s) 84, 1206, 1418, 1436
DinI GGCGCC 1 cut(s) 1869
DraIII CACNNNGTG 1 cut(s) 646
EaeI YGGCCR 1 cut(s) 1776
Eam1104I CTCTTC 2 cut(s) 1417, 1521
EarI CTCTTC 2 cut(s) 1417, 1521
EciI GGCGGA 1 cut(s) 1871
Ecl136II GAGCTC 1 cut(s) 1273
Eco130I CCWWGG 4 cut(s) 197, 1000, 1638, 1779
Eco24I GRGCYC 1 cut(s) 1275
Eco32I GATATC 2 cut(s) 795, 997
Eco47I GGWCC 1 cut(s) 17
Eco53kI GAGCTC 1 cut(s) 1273
Eco57I CTGAAG 1 cut(s) 1502
Eco81I CCTNAGG 1 cut(s) 84
Eco88I CYCGRG 2 cut(s) 459, 1274
Eco91I GGTNACC 1 cut(s) 1798
EcoICRI GAGCTC 1 cut(s) 1273
EcoNI CCTNNNNNAGG 1 cut(s) 1658
EcoO65I GGTNACC 1 cut(s) 1798
EcoRI GAATTC 1 cut(s) 893
EcoRII CCWGG 4 cut(s) 55, 121, 1370, 1497
EcoRV GATATC 2 cut(s) 795, 997
EcoT14I CCWWGG 4 cut(s) 197, 1000, 1638, 1779
EcoT22I ATGCAT 1 cut(s) 923
EcoT38I GRGCYC 1 cut(s) 1275
EgeI GGCGCC 1 cut(s) 1869
EheI GGCGCC 1 cut(s) 1869
ErhI CCWWGG 4 cut(s) 197, 1000, 1638, 1779
Esp3I CGTCTC 1 cut(s) 1710
FalI AAGNNNNNCTT 2 cut(s) 1518, 1550
FaqI GGGAC 1 cut(s) 30
FblI GTMKAC 1 cut(s) 1376
Fnu4HI GCNGC 5 cut(s) 324, 405, 1854, 1871, 1917
FokI GGATG 5 cut(s) 722, 855, 1270, 1460, 1621
FriOI GRGCYC 1 cut(s) 1275
Fsp4HI GCNGC 5 cut(s) 324, 405, 1854, 1871, 1917
FspBI CTAG 4 cut(s) 362, 635, 908, 1200
GlaI GCGC 2 cut(s) 1716, 1869
GluI GCNGC 5 cut(s) 324, 405, 1854, 1871, 1917
GsaI CCCAGC 1 cut(s) 1877
GsuI CTGGAG 1 cut(s) 1367
HaeII RGCGCY 2 cut(s) 1718, 1871
HaeIII GGCC 4 cut(s) 160, 591, 1778, 1822
HapII CCGG 2 cut(s) 1487, 1938
HhaI GCGC 2 cut(s) 1717, 1870
Hin1I GRCGYC 1 cut(s) 1868
Hin6I GCGC 2 cut(s) 1715, 1868
HinP1I GCGC 2 cut(s) 1715, 1868
HinfI GANTC 8 cut(s) 449, 472, 663, 745, 836, 1225, 1620, 1667
HpaII CCGG 2 cut(s) 1487, 1938
HphI GGTGA 2 cut(s) 1501, 1676
Hpy166II GTNNAC 3 cut(s) 640, 1377, 1572
Hpy188I TCNGA 7 cut(s) 187, 338, 421, 835, 1230, 1482, 1521
Hpy8I GTNNAC 3 cut(s) 640, 1377, 1572
Hpy99I CGWCG 1 cut(s) 105
HpyAV CCTTC 6 cut(s) 1183, 1282, 1553, 1654, 1747, 1848
HpyCH4III ACNGT 4 cut(s) 866, 1037, 1339, 1946
HpyCH4IV ACGT 3 cut(s) 100, 528, 1680
HpyF10VI GCNNNNNNNGC 4 cut(s) 556, 695, 1876, 1885
HpyF3I CTNAG 4 cut(s) 84, 1206, 1418, 1436
HpySE526I ACGT 3 cut(s) 100, 528, 1680
Hsp92I GRCGYC 1 cut(s) 1868
HspAI GCGC 2 cut(s) 1715, 1868
KasI GGCGCC 1 cut(s) 1867
LguI GCTCTTC 1 cut(s) 1521
LmnI GCTCC 1 cut(s) 758
Lsp1109I GCAGC 3 cut(s) 335, 416, 1928
LweI GCATC 5 cut(s) 42, 833, 970, 1706, 1928
MabI ACCWGGT 1 cut(s) 55
MaeI CTAG 4 cut(s) 362, 635, 908, 1200
MaeII ACGT 3 cut(s) 100, 528, 1680
MaeIII GTNAC 4 cut(s) 217, 343, 1031, 1798
MfeI CAATTG 1 cut(s) 1895
MflI RGATCY 1 cut(s) 1342
MhlI GDGCHC 1 cut(s) 1275
MlsI TGGCCA 1 cut(s) 1778
MluCI AATT 9 cut(s) 168, 398, 654, 721, 893, 1066, 1119, 1691, 1895
MluNI TGGCCA 1 cut(s) 1778
Mly113I GGCGCC 1 cut(s) 1868
MlyI GAGTC 1 cut(s) 754
Mox20I TGGCCA 1 cut(s) 1778
Mph1103I ATGCAT 1 cut(s) 923
MscI TGGCCA 1 cut(s) 1778
MseI TTAA 3 cut(s) 605, 708, 1608
MslI CAYNNNNRTG 1 cut(s) 41
Msp20I TGGCCA 1 cut(s) 1778
MspA1I CMGCKG 1 cut(s) 1873
MspI CCGG 2 cut(s) 1487, 1938
MspR9I CCNGG 4 cut(s) 57, 123, 1372, 1499
MunI CAATTG 1 cut(s) 1895
Mva1269I GAATGC 1 cut(s) 921
MvaI CCWGG 4 cut(s) 57, 123, 1372, 1499
MvnI CGCG 1 cut(s) 683
MwoI GCNNNNNNNGC 4 cut(s) 556, 695, 1876, 1885
NarI GGCGCC 1 cut(s) 1868
NcoI CCATGG 2 cut(s) 197, 1638
NlaIV GGNNCC 3 cut(s) 18, 760, 1869
NmuCI GTSAC 1 cut(s) 343
NruI TCGCGA 1 cut(s) 683
NsiI ATGCAT 1 cut(s) 923
PaeR7I CTCGAG 1 cut(s) 1274
PagI TCATGA 1 cut(s) 1299
PciSI GCTCTTC 1 cut(s) 1521
PctI GAATGC 1 cut(s) 921
PfeI GAWTC 7 cut(s) 449, 472, 663, 836, 1225, 1620, 1667
PkrI GCNGC 5 cut(s) 325, 406, 1855, 1872, 1918
PleI GAGTC 1 cut(s) 753
PluTI GGCGCC 1 cut(s) 1871
PpsI GAGTC 1 cut(s) 753
PsiI TTATAA 1 cut(s) 884
Psp124BI GAGCTC 1 cut(s) 1275
Psp6I CCWGG 4 cut(s) 55, 121, 1370, 1497
PspEI GGTNACC 1 cut(s) 1798
PspFI CCCAGC 1 cut(s) 1873
PspGI CCWGG 4 cut(s) 55, 121, 1370, 1497
PspN4I GGNNCC 3 cut(s) 18, 760, 1869
PspPI GGNCC 1 cut(s) 17
PspXI VCTCGAGB 1 cut(s) 1274
PsuI RGATCY 1 cut(s) 1342
RruI TCGCGA 1 cut(s) 683
RsaI GTAC 6 cut(s) 770, 868, 1093, 1414, 1428, 1770
RsaNI GTAC 6 cut(s) 769, 867, 1092, 1413, 1427, 1769
RseI CAYNNNNRTG 1 cut(s) 41
SacI GAGCTC 1 cut(s) 1275
SapI GCTCTTC 1 cut(s) 1521
SaqAI TTAA 3 cut(s) 605, 708, 1608
SatI GCNGC 5 cut(s) 324, 405, 1854, 1871, 1917
Sau96I GGNCC 1 cut(s) 17
ScaI AGTACT 1 cut(s) 868
SchI GAGTC 1 cut(s) 754
ScrFI CCNGG 4 cut(s) 57, 123, 1372, 1499
SduI GDGCHC 1 cut(s) 1275
SexAI ACCWGGT 1 cut(s) 55
SfaNI GCATC 5 cut(s) 42, 833, 970, 1706, 1928
SfcI CTRYAG 2 cut(s) 1172, 1942
SfoI GGCGCC 1 cut(s) 1869
Sfr274I CTCGAG 1 cut(s) 1274
SinI GGWCC 1 cut(s) 17
SlaI CTCGAG 1 cut(s) 1274
SmiMI CAYNNNNRTG 1 cut(s) 41
SmlI CTYRAG 6 cut(s) 132, 986, 1060, 1274, 1391, 1655
SmoI CTYRAG 6 cut(s) 132, 986, 1060, 1274, 1391, 1655
Sse9I AATT 9 cut(s) 168, 398, 654, 721, 893, 1066, 1119, 1691, 1895
SsiI CCGC 4 cut(s) 1731, 1853, 1856, 1871
SspDI GGCGCC 1 cut(s) 1867
SspI AATATT 2 cut(s) 972, 1817
SspMI CTAG 4 cut(s) 362, 635, 908, 1200
SstI GAGCTC 1 cut(s) 1275
StyD4I CCNGG 4 cut(s) 55, 121, 1370, 1497
StyI CCWWGG 4 cut(s) 197, 1000, 1638, 1779
TaaI ACNGT 4 cut(s) 866, 1037, 1339, 1946
TaiI ACGT 3 cut(s) 103, 531, 1683
TasI AATT 9 cut(s) 168, 398, 654, 721, 893, 1066, 1119, 1691, 1895
TatI WGTACW 2 cut(s) 866, 1768
TauI GCSGC 2 cut(s) 1856, 1873
TfiI GAWTC 7 cut(s) 449, 472, 663, 836, 1225, 1620, 1667
Tru1I TTAA 3 cut(s) 605, 708, 1608
Tru9I TTAA 3 cut(s) 605, 708, 1608
TscAI CASTG 1 cut(s) 1951
TseFI GTSAC 1 cut(s) 343
TseI GCWGC 3 cut(s) 323, 404, 1916
Tsp45I GTSAC 1 cut(s) 343
TspDTI ATGAA 7 cut(s) 213, 374, 462, 1301, 1316, 1464, 1540
TspGWI ACGGA 2 cut(s) 324, 362
TspRI CASTG 1 cut(s) 1951
VpaK11BI GGWCC 1 cut(s) 17
XagI CCTNNNNNAGG 1 cut(s) 1658
XapI RAATTY 3 cut(s) 398, 654, 893
XbaI TCTAGA 1 cut(s) 907
XhoI CTCGAG 1 cut(s) 1274
XmiI GTMKAC 1 cut(s) 1376
XspI CTAG 4 cut(s) 362, 635, 908, 1200
ZrmI AGTACT 1 cut(s) 868
Zsp2I ATGCAT 1 cut(s) 923
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.