RchiOBHm_Chr1g0381141

Cyclic nucleotide-gated ion channel 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0000119
Physical Location & Seq
Reverse (-)
66506067 .. 66508642
2576 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ60434

Sequence Viewer

Length: 1758 bp
ATGAACCCATGGTGGAATACGATTCTTGTAACTTCATGTGTGATTGCAGTTTTATTTGATCCTTTGTTCTTTTACATTCCATACATCAAAGAGGAAGAAAAGTGCATGGGAATCGATAAACAAGTGCGGACTGCAGCTCTGGTTTTTCGATCAGTCACGGACATCACTTTCCTAGTGCATATCATATACCAACTCCGTGAAGCTATCAAATCTGCAGCCTCAAAGATTCCAAGGGATACCAATTCGGATTGGGAATGGGAATCGGTAACCCGAGTTCAGATGATTCAGTTTGCAAAAGAATTTTCTCGCAAATTGTCATGGCGCTCTTTCCTAACTGACGTTTTTGCTATTTTCCCTATGCCACAACTGCTAATAGTAGGGTTGTTTTTCGAAATGGAAGGCCGTAACTATTTACTGAGAAGAAAGATTCTGAGCGGTTTTCTTCTAGTCCAATATGTGCCAAGAATTTATCGAATTTATCTATCGTCTACTGTAGTTACACAGTCCGCATTATGGATTAAAGGTGCATTCAATTTTTTCCTCTACGTTCTTGCCAGTCATGTACTGGGAGCCTTTTGGTATTTTTTTTCTATTCAGCGAGAGATATCATGCTGGTATCGAACTTGCATTGATACAAAACAAGCAGAATCAGAATGCACTTTTTACTGCCATGACAAGACTGCAATTATTACCAAAGAATTCAATAGAACTCTAGGAGATCTTTGCCTTGTAAAAGTTCCATATAATATGACTGATCCACCATTTGATTTTGGAATATTTTTTGATGCCCTCAAAAATGATATCCAGGGGCCAATAAACTTTCCAACAAAGATTGGTTACTGTTTTTGGTGGGGCTTGCGAAATTTAAGTTCTTTTGGCACAAGTTTGGAAACAAGTACCTATCTGTGGGAAAACAGCTTTGCAATTCTTATTTCTATCATCGGCTTGCTATTATTTCTATATCTCATTGGAAATGTTCAGATATATATGGAGAGGGCAACTACCAGGGTGGAGGAGGTAAGAGAGAAGATTCTGATAAAAAAGAACGATATAGAAAAGTGGATGGAAAAAAATGGTCTCCAAGATGACATGAAGGAAGAGATCATGAAAAACATCAAGCAAAAATTGGAAGAGGACATAAATGCAGATCTGGAGGATCTAGTCTCTATTCTTCCCTGGTATACCAAGAAAGCTCTAAAGCGCGTTCTCTGCATGAGTGCGCTAAGAAAAGTACCAATGCTTAGCCAGATGGATGAAAAAGTTTTGAAAATGATGTGCGACTATCTGAAGCCCGTGAATTACCCTGAGAATACCCTGGTTTTTCAGATGGGAGAACCACTTGATCGAATGGTCTTCATTACAGAAGGGTTTATGTGGACTTACACGACTCCTACTGAGAGTAGTCATTTTGGAAAAGCAGCAGGACTGGCTACTTCTCCATCCATGGACACCAACTTCCTCAAGAAGGGTGATTCTTATGGACACGCTCTTCTGCAGTTTGCATCATCATCTCTTGTGGCACTCCCTACCTCAGCTGCAAATGTCCGGTGTCACACAAAGGTAGAGGCGTTCGTTCTCATGGCCAAGGACTTGAAAAACATAGTAACTAAATGCGAAAATTTTTGGCCTTTCGACTACAATGCTTCTAAAGATGAGGCGGTGAATCAGGTCACACCCCTGGGCCAGTTTCAGCAACAACAAATGCCAAAGAAGCGTGTATCAACATCGATCATCAACCCCACCGGCTATAGTGGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
Ion_trans cNMP_binding

Protein Analysis

585

Amino Acids

67.75

Weight (kDa)

8.27

Isoelectric Point (pI)

38.2

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000119)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g10570 FvH4_4g36390 FvH4_7g31840 FvH4_7g31840 FvH4_7g31850 FvH4_7g31850 FvH4_7g31861 FvH4_7g31861 FvH4_7g31950
malus_domestica MD01G1054600.v1.1 MD01G1221100.v1.1 MD01G1221400.v1.1 MD01G1221600.v1.1 MD01G1221800.v1.1 MD01G1222000.v1.1 MD01G1222100.v1.1 MD07G1140800.v1.1 MD07G1291200.v1.1 MD07G1291400.v1.1 MD07G1291500.v1.1 MD07G1291700.v1.1 MD07G1292500.v1.1 MD07G1292700.v1.1 MD07G1292800.v1.1 MD07G1292900.v1.1 MD08G1241600.v1.1 MD11G1083800.v1.1 MD15G1431600.v1.1
prunus_persica Prupe.1G017800_v2.0.a1 Prupe.1G017800_v2.0.a1 Prupe.1G162800_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312700_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G143000_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1
pyrus_communis pycom01g23050 pycom01g23070 pycom01g23090 pycom01g23100 pycom01g23110 pycom01g23120 pycom01g23170 pycom07g26410 pycom07g26440 pycom07g26470 pycom07g26480 pycom07g26490 pycom07g26500 pycom07g26510 pycom07g26530 pycom07g26540 pycom07g26570 pycom07g26580 pycom07g26590 pycom08g20940
rosa_chinensis RchiOBHm_Chr1g0324571 RchiOBHm_Chr1g0336181 RchiOBHm_Chr1g0381061 RchiOBHm_Chr1g0381091 RchiOBHm_Chr1g0381121 RchiOBHm_Chr1g0381131 RchiOBHm_Chr1g0381141 RchiOBHm_Chr1g0381161 RchiOBHm_Chr1g0381211 RchiOBHm_Chr2g0110361 RchiOBHm_Chr2g0120231 RchiOBHm_Chr3g0486281 RchiOBHm_Chr3g0486311 RchiOBHm_Chr3g0486401 RchiOBHm_Chr4g0409511 RchiOBHm_Chr4g0409521 RchiOBHm_Chr5g0017271 RchiOBHm_Chr5g0048781 RchiOBHm_Chr5g0048811
rosa_laevigata RLG00000002401 RLG00000008559 RLG00000017798 RLG00000017799 RLG00000023082 RLG00000023088 RLG00000026230 RLG00000026238 RLG00000026240 RLG00000026241 RLG00000026242 RLG00000026243 RLG00000026244 RLG00000026246 RLG00000026247 RLG00000026248 RLG00000029876 RLG00000030189 RLG00000034579
rosa_multiflora Rmu_co8101374.1_g000001 Rmu_co8309149.1_g000001 Rmu_co8450063.1_g000001 Rmu_sc0000441.1_g000094 Rmu_sc0000479.1_g000005 Rmu_sc0000647.1_g000006 Rmu_sc0001393.1_g000031 Rmu_sc0001423.1_g000037 Rmu_sc0001616.1_g000015 Rmu_sc0001857.1_g000011 Rmu_sc0002183.1_g000013 Rmu_sc0002183.1_g000028 Rmu_sc0002183.1_g000030 Rmu_sc0002688.1_g000003 Rmu_sc0002688.1_g000020 Rmu_sc0003801.1_g000003 Rmu_sc0003801.1_g000004 Rmu_sc0004125.1_g000006 Rmu_sc0004494.1_g000005 Rmu_sc0004494.1_g000006 Rmu_sc0004494.1_g000008 Rmu_sc0004494.1_g000009 Rmu_sc0005842.1_g000004 Rmu_sc0006872.1_g000001 Rmu_sc0006872.1_g000005 Rmu_sc0006872.1_g000009 Rmu_sc0006872.1_g000010 Rmu_sc0008053.1_g000026
rosa_roxburghii Rroxscaffold_159G00432960 Rroxscaffold_1G00033060 Rroxscaffold_2G00123150 Rroxscaffold_2G00123170 Rroxscaffold_2G00133500 Rroxscaffold_2G00133550 Rroxscaffold_4G00278650 Rroxscaffold_4G00278750 Rroxscaffold_4G00278790 Rroxscaffold_4G00278800 Rroxscaffold_4G00278810 Rroxscaffold_4G00325390 Rroxscaffold_5G00354010 Rroxscaffold_6G00395890 Rroxscaffold_6G00395900 Rroxscaffold_6G00395920
rosa_rugosa Rorug01G0046900.1 Rorug01G0427000 Rorug01G0427100 Rorug01G0427200 Rorug01G0427300 Rorug01G0427400 Rorug01G0427500 Rorug01G0427500 Rorug01G0427600 Rorug01G0427600 Rorug01G0427700 Rorug01G0427700 Rorug01G0427800 Rorug01G0428700 Rorug02G0166400 Rorug02G0166500 Rorug02G0166500 Rorug02G0166600 Rorug02G0166600 Rorug02G0166700 Rorug02G0167300 Rorug02G0167300 Rorug02G0167300 Rorug03G0224600 Rorug03G0224600 Rorug04G0094400 Rorug05G0241100 Rorug05G0241200
rosa_samantha Rh1BG407700 Rh1BG407900 Rh1BG409000 Rh1CG064700 Rh1CG420900 Rh1CG421000 Rh1CG421200 Rh1CG421300 Rh1CG421800 Rh1CG421900 Rh1CG422000 Rh1CG422200 Rh1CG422300 Rh1CG423600 Rh1DG437600 Rh1DG438900 Rh1DG439000 Rh1DG440300 Rh2AG219100 Rh2CG220700 Rh2DG225300 Rh3AG274400 Rh3AG274600 Rh3CG308900 Rh3DG305800 Rh4AG156400 Rh5AG129000 Rh5AG320900 Rh5CG139600
rosa_wichuraiana Rw1G005300 Rw1G039280 Rw1G039300 Rw1G039310 Rw1G039320 Rw1G039330 Rw1G039340 Rw1G039360 Rw1G039390 Rw2G016910 Rw2G022800 Rw3G024330 Rw3G024340 Rw3G024350 Rw3G024400 Rw4G012810 Rw5G030120 Rw5G030280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 435
AccI GTMKAC 2 cut(s) 488, 1181
AccII CGCG 1 cut(s) 1203
AciI CCGC 4 cut(s) 127, 435, 507, 1658
AclWI GGATC 3 cut(s) 53, 749, 1164
AcoI YGGCCR 1 cut(s) 1581
AcsI RAATTY 6 cut(s) 299, 465, 474, 698, 862, 1618
AcuI CTGAAG 1 cut(s) 1307
AfaI GTAC 3 cut(s) 564, 898, 1233
AfiI CCNNNNNNNGG 3 cut(s) 513, 906, 1465
AgsI TTSAA 4 cut(s) 532, 703, 1267, 1594
AjnI CCWGG 5 cut(s) 804, 1004, 1175, 1314, 1677
AluBI AGCT 5 cut(s) 137, 203, 918, 1193, 1535
AluI AGCT 5 cut(s) 137, 203, 918, 1193, 1535
Alw26I GTCTC 2 cut(s) 1082, 1168
AlwI GGATC 3 cut(s) 53, 749, 1164
Ama87I CYCGRG 1 cut(s) 270
AoxI GGCC 5 cut(s) 400, 809, 1581, 1625, 1681
ApeKI GCWGC 4 cut(s) 134, 215, 1418, 1535
ApoI RAATTY 6 cut(s) 299, 465, 474, 698, 862, 1618
AspLEI GCGC 3 cut(s) 324, 1203, 1222
AspS9I GGNCC 2 cut(s) 809, 1681
AsuHPI GGTGA 2 cut(s) 1481, 1672
AsuII TTCGAA 1 cut(s) 390
AvaI CYCGRG 1 cut(s) 270
BalI TGGCCA 1 cut(s) 1583
BbsI GAAGAC 1 cut(s) 1345
BbvCI CCTCAGC 1 cut(s) 1531
BbvI GCAGC 4 cut(s) 146, 227, 1430, 1522
BccI CCATC 4 cut(s) 1057, 1243, 1321, 1447
BceAI ACGGC 1 cut(s) 387
BcgI CGANNNNNNTGC 4 cut(s) 94, 128, 1622, 1656
BciT130I CCWGG 5 cut(s) 806, 1006, 1177, 1316, 1679
BciVI GTATCC 1 cut(s) 229
BcoDI GTCTC 2 cut(s) 1082, 1168
BfaI CTAG 4 cut(s) 173, 446, 713, 1160
BfmI CTRYAG 5 cut(s) 132, 213, 492, 1493, 1747
BfoI RGCGCY 1 cut(s) 325
BfuI GTATCC 1 cut(s) 229
BglII AGATCT 2 cut(s) 718, 1147
BisI GCNGC 4 cut(s) 135, 216, 1419, 1536
BlpI GCTNAGC 1 cut(s) 1241
BlsI GCNGC 4 cut(s) 136, 217, 1420, 1537
Bme1390I CCNGG 5 cut(s) 806, 1006, 1177, 1316, 1679
BmeT110I CYCGRG 1 cut(s) 270
BmgT120I GGNCC 2 cut(s) 809, 1681
BmiI GGNNCC 2 cut(s) 571, 810
BmrFI CCNGG 5 cut(s) 806, 1006, 1177, 1316, 1679
BmrI ACTGGG 1 cut(s) 575
BmsI GCATC 2 cut(s) 775, 1511
BmuI ACTGGG 1 cut(s) 575
BpiI GAAGAC 1 cut(s) 1345
BpmI CTGGAG 1 cut(s) 1172
Bpu10I CCTNAGC 1 cut(s) 1531
Bpu1102I GCTNAGC 1 cut(s) 1241
Bpu14I TTCGAA 1 cut(s) 390
BpuEI CTTGAG 1 cut(s) 1445
Bsa29I ATCGAT 2 cut(s) 114, 1727
BsaI GGTCTC 1 cut(s) 1082
BsaWI WCCGGW 1 cut(s) 1545
Bsc4I CCNNNNNNNGG 3 cut(s) 513, 906, 1465
Bse118I RCCGGY 1 cut(s) 1742
Bse1I ACTGG 4 cut(s) 555, 570, 1431, 1684
BseBI CCWGG 5 cut(s) 806, 1006, 1177, 1316, 1679
BseCI ATCGAT 2 cut(s) 114, 1727
BseGI GGATG 3 cut(s) 1068, 1258, 1439
BseLI CCNNNNNNNGG 3 cut(s) 513, 906, 1465
BseMII CTCAG 5 cut(s) 407, 422, 1296, 1386, 1545
BseNI ACTGG 4 cut(s) 555, 570, 1431, 1684
BseRI GAGGAG 1 cut(s) 1028
BseXI GCAGC 4 cut(s) 146, 227, 1430, 1522
Bsh1236I CGCG 1 cut(s) 1203
BshFI GGCC 5 cut(s) 402, 811, 1583, 1627, 1683
BshVI ATCGAT 2 cut(s) 114, 1727
BsiHKCI CYCGRG 1 cut(s) 270
BsiSI CCGG 2 cut(s) 1546, 1743
BslI CCNNNNNNNGG 3 cut(s) 513, 906, 1465
BsmAI GTCTC 2 cut(s) 1082, 1168
BsmI GAATGC 2 cut(s) 527, 659
BsnI GGCC 5 cut(s) 402, 811, 1583, 1627, 1683
Bso31I GGTCTC 1 cut(s) 1082
BsoBI CYCGRG 1 cut(s) 270
Bsp119I TTCGAA 1 cut(s) 390
Bsp143I GATC 9 cut(s) 58, 149, 718, 754, 1101, 1147, 1156, 1342, 1728
Bsp1720I GCTNAGC 1 cut(s) 1241
Bsp19I CCATGG 2 cut(s) 8, 1443
BspACI CCGC 4 cut(s) 127, 435, 507, 1658
BspANI GGCC 5 cut(s) 402, 811, 1583, 1627, 1683
BspCNI CTCAG 5 cut(s) 408, 423, 1297, 1387, 1544
BspDI ATCGAT 2 cut(s) 114, 1727
BspFNI CGCG 1 cut(s) 1203
BspHI TCATGA 1 cut(s) 1104
BspLI GGNNCC 2 cut(s) 571, 810
BspMAI CTGCAG 3 cut(s) 136, 217, 1497
BspPI GGATC 3 cut(s) 53, 749, 1164
BspQI GCTCTTC 1 cut(s) 1494
BspT104I TTCGAA 1 cut(s) 390
BspTNI GGTCTC 1 cut(s) 1082
BsrBI CCGCTC 1 cut(s) 435
BsrFI RCCGGY 1 cut(s) 1742
BsrI ACTGG 4 cut(s) 555, 570, 1431, 1684
BssAI RCCGGY 1 cut(s) 1742
BssMI GATC 9 cut(s) 58, 149, 718, 754, 1101, 1147, 1156, 1342, 1728
BssNAI GTATAC 1 cut(s) 1182
BssT1I CCWWGG 4 cut(s) 8, 230, 1443, 1584
Bst1107I GTATAC 1 cut(s) 1182
Bst2UI CCWGG 5 cut(s) 806, 1006, 1177, 1316, 1679
Bst4CI ACNGT 3 cut(s) 493, 504, 842
Bst6I CTCTTC 3 cut(s) 1092, 1125, 1494
BstBI TTCGAA 1 cut(s) 390
BstC8I GCNNGC 2 cut(s) 857, 947
BstDEI CTNAG 7 cut(s) 416, 431, 1223, 1241, 1305, 1395, 1531
BstDSI CCRYGG 2 cut(s) 8, 1443
BstEII GGTNACC 1 cut(s) 265
BstENI CCTNNNNNAGG 1 cut(s) 1463
BstF5I GGATG 3 cut(s) 1068, 1258, 1439
BstFNI CGCG 1 cut(s) 1203
BstH2I RGCGCY 1 cut(s) 325
BstHHI GCGC 3 cut(s) 324, 1203, 1222
BstKTI GATC 9 cut(s) 61, 152, 721, 757, 1104, 1150, 1159, 1345, 1731
BstMAI GTCTC 2 cut(s) 1082, 1168
BstMBI GATC 9 cut(s) 58, 149, 718, 754, 1101, 1147, 1156, 1342, 1728
BstMWI GCNNNNNNNGC 4 cut(s) 367, 1209, 1427, 1711
BstNI CCWGG 5 cut(s) 806, 1006, 1177, 1316, 1679
BstPI GGTNACC 1 cut(s) 265
BstSCI CCNGG 5 cut(s) 804, 1004, 1175, 1314, 1677
BstSFI CTRYAG 5 cut(s) 132, 213, 492, 1493, 1747
BstUI CGCG 1 cut(s) 1203
BstV1I GCAGC 4 cut(s) 146, 227, 1430, 1522
BstV2I GAAGAC 1 cut(s) 1345
BstX2I RGATCY 3 cut(s) 718, 1147, 1156
BstYI RGATCY 3 cut(s) 718, 1147, 1156
BstZ17I GTATAC 1 cut(s) 1182
Bsu15I ATCGAT 2 cut(s) 114, 1727
BsuI GTATCC 1 cut(s) 229
BsuRI GGCC 5 cut(s) 402, 811, 1583, 1627, 1683
BsuTUI ATCGAT 2 cut(s) 114, 1727
BtgI CCRYGG 2 cut(s) 8, 1443
BtsCI GGATG 3 cut(s) 1068, 1258, 1439
Cac8I GCNNGC 2 cut(s) 857, 947
CciI TCATGA 1 cut(s) 1104
CfoI GCGC 3 cut(s) 324, 1203, 1222
Cfr10I RCCGGY 1 cut(s) 1742
Cfr13I GGNCC 2 cut(s) 809, 1681
ClaI ATCGAT 2 cut(s) 114, 1727
Csp6I GTAC 3 cut(s) 563, 897, 1232
CviQI GTAC 3 cut(s) 563, 897, 1232
DdeI CTNAG 7 cut(s) 416, 431, 1223, 1241, 1305, 1395, 1531
DpnI GATC 9 cut(s) 60, 151, 720, 756, 1103, 1149, 1158, 1344, 1730
DpnII GATC 9 cut(s) 58, 149, 718, 754, 1101, 1147, 1156, 1342, 1728
EaeI YGGCCR 1 cut(s) 1581
Eam1104I CTCTTC 3 cut(s) 1092, 1125, 1494
EarI CTCTTC 3 cut(s) 1092, 1125, 1494
Eco130I CCWWGG 4 cut(s) 8, 230, 1443, 1584
Eco31I GGTCTC 1 cut(s) 1082
Eco32I GATATC 2 cut(s) 606, 802
Eco57I CTGAAG 1 cut(s) 1307
Eco88I CYCGRG 1 cut(s) 270
Eco91I GGTNACC 1 cut(s) 265
EcoNI CCTNNNNNAGG 1 cut(s) 1463
EcoO65I GGTNACC 1 cut(s) 265
EcoRI GAATTC 1 cut(s) 698
EcoRII CCWGG 5 cut(s) 804, 1004, 1175, 1314, 1677
EcoRV GATATC 2 cut(s) 606, 802
EcoT14I CCWWGG 4 cut(s) 8, 230, 1443, 1584
ErhI CCWWGG 4 cut(s) 8, 230, 1443, 1584
FblI GTMKAC 2 cut(s) 488, 1181
Fnu4HI GCNGC 4 cut(s) 135, 216, 1419, 1536
FokI GGATG 3 cut(s) 1075, 1265, 1426
Fsp4HI GCNGC 4 cut(s) 135, 216, 1419, 1536
FspBI CTAG 4 cut(s) 173, 446, 713, 1160
GlaI GCGC 3 cut(s) 323, 1202, 1221
GluI GCNGC 4 cut(s) 135, 216, 1419, 1536
GsuI CTGGAG 1 cut(s) 1172
HaeII RGCGCY 1 cut(s) 325
HaeIII GGCC 5 cut(s) 402, 811, 1583, 1627, 1683
HapII CCGG 2 cut(s) 1546, 1743
HhaI GCGC 3 cut(s) 324, 1203, 1222
Hin6I GCGC 3 cut(s) 322, 1201, 1220
HinP1I GCGC 3 cut(s) 322, 1201, 1220
HpaII CCGG 2 cut(s) 1546, 1743
HphI GGTGA 2 cut(s) 1481, 1672
Hpy166II GTNNAC 3 cut(s) 489, 1182, 1377
Hpy188I TCNGA 8 cut(s) 247, 279, 432, 652, 981, 1035, 1287, 1326
Hpy188III TCNNGA 3 cut(s) 1105, 1151, 1462
Hpy8I GTNNAC 3 cut(s) 489, 1182, 1377
HpyAV CCTTC 4 cut(s) 392, 1087, 1358, 1459
HpyCH4III ACNGT 3 cut(s) 493, 504, 842
HpyCH4IV ACGT 2 cut(s) 339, 546
HpyF10VI GCNNNNNNNGC 4 cut(s) 367, 1209, 1427, 1711
HpyF3I CTNAG 7 cut(s) 416, 431, 1223, 1241, 1305, 1395, 1531
HpySE526I ACGT 2 cut(s) 339, 546
HspAI GCGC 3 cut(s) 322, 1201, 1220
Kzo9I GATC 9 cut(s) 58, 149, 718, 754, 1101, 1147, 1156, 1342, 1728
LguI GCTCTTC 1 cut(s) 1494
LmnI GCTCC 1 cut(s) 569
Lsp1109I GCAGC 4 cut(s) 146, 227, 1430, 1522
LweI GCATC 2 cut(s) 775, 1511
MaeI CTAG 4 cut(s) 173, 446, 713, 1160
MaeII ACGT 2 cut(s) 339, 546
MaeIII GTNAC 9 cut(s) 28, 154, 265, 404, 496, 836, 1550, 1603, 1669
MalI GATC 9 cut(s) 60, 151, 720, 756, 1103, 1149, 1158, 1344, 1730
MbiI CCGCTC 1 cut(s) 435
MboI GATC 9 cut(s) 58, 149, 718, 754, 1101, 1147, 1156, 1342, 1728
MboII GAAGA 9 cut(s) 107, 432, 434, 1039, 1109, 1142, 1163, 1345, 1481
MflI RGATCY 3 cut(s) 718, 1147, 1156
MlsI TGGCCA 1 cut(s) 1583
MluNI TGGCCA 1 cut(s) 1583
MlyI GAGTC 1 cut(s) 1381
MmeI TCCRAC 1 cut(s) 848
Mox20I TGGCCA 1 cut(s) 1583
MscI TGGCCA 1 cut(s) 1583
MseI TTAA 2 cut(s) 519, 866
Msp20I TGGCCA 1 cut(s) 1583
MspA1I CMGCKG 1 cut(s) 1535
MspI CCGG 2 cut(s) 1546, 1743
MspR9I CCNGG 5 cut(s) 806, 1006, 1177, 1316, 1679
Mva1269I GAATGC 2 cut(s) 527, 659
MvaI CCWGG 5 cut(s) 806, 1006, 1177, 1316, 1679
MvnI CGCG 1 cut(s) 1203
MwoI GCNNNNNNNGC 4 cut(s) 367, 1209, 1427, 1711
NcoI CCATGG 2 cut(s) 8, 1443
NdeII GATC 9 cut(s) 58, 149, 718, 754, 1101, 1147, 1156, 1342, 1728
NlaIV GGNNCC 2 cut(s) 571, 810
NmuCI GTSAC 3 cut(s) 154, 1550, 1669
NspV TTCGAA 1 cut(s) 390
PagI TCATGA 1 cut(s) 1104
PasI CCCWGGG 1 cut(s) 1678
PciSI GCTCTTC 1 cut(s) 1494
PctI GAATGC 2 cut(s) 527, 659
PkrI GCNGC 4 cut(s) 136, 217, 1420, 1537
PleI GAGTC 1 cut(s) 1381
PpsI GAGTC 1 cut(s) 1381
Psp6I CCWGG 5 cut(s) 804, 1004, 1175, 1314, 1677
PspEI GGTNACC 1 cut(s) 265
PspGI CCWGG 5 cut(s) 804, 1004, 1175, 1314, 1677
PspN4I GGNNCC 2 cut(s) 571, 810
PspPI GGNCC 2 cut(s) 809, 1681
PsrI GAACNNNNNNTAC 2 cut(s) 258, 290
PstI CTGCAG 3 cut(s) 136, 217, 1497
PsuI RGATCY 3 cut(s) 718, 1147, 1156
PvuII CAGCTG 1 cut(s) 1535
RsaI GTAC 3 cut(s) 564, 898, 1233
RsaNI GTAC 3 cut(s) 563, 897, 1232
SapI GCTCTTC 1 cut(s) 1494
SaqAI TTAA 2 cut(s) 519, 866
SatI GCNGC 4 cut(s) 135, 216, 1419, 1536
Sau3AI GATC 9 cut(s) 58, 149, 718, 754, 1101, 1147, 1156, 1342, 1728
Sau96I GGNCC 2 cut(s) 809, 1681
SchI GAGTC 1 cut(s) 1381
ScrFI CCNGG 5 cut(s) 806, 1006, 1177, 1316, 1679
SfaNI GCATC 2 cut(s) 775, 1511
SfcI CTRYAG 5 cut(s) 132, 213, 492, 1493, 1747
SfuI TTCGAA 1 cut(s) 390
SmlI CTYRAG 1 cut(s) 1460
SmoI CTYRAG 1 cut(s) 1460
SsiI CCGC 4 cut(s) 127, 435, 507, 1658
SspI AATATT 1 cut(s) 777
SspMI CTAG 4 cut(s) 173, 446, 713, 1160
StyD4I CCNGG 5 cut(s) 804, 1004, 1175, 1314, 1677
StyI CCWWGG 4 cut(s) 8, 230, 1443, 1584
TaaI ACNGT 3 cut(s) 493, 504, 842
TaiI ACGT 2 cut(s) 342, 549
TaqI TCGA 8 cut(s) 114, 148, 390, 472, 619, 1345, 1632, 1727
TatI WGTACW 1 cut(s) 562
Tru1I TTAA 2 cut(s) 519, 866
Tru9I TTAA 2 cut(s) 519, 866
TseFI GTSAC 3 cut(s) 154, 1550, 1669
TseI GCWGC 4 cut(s) 134, 215, 1418, 1535
Tsp45I GTSAC 3 cut(s) 154, 1550, 1669
TspDTI ATGAA 6 cut(s) 17, 24, 1106, 1121, 1269, 1345
TspGWI ACGGA 2 cut(s) 173, 185
XagI CCTNNNNNAGG 1 cut(s) 1463
XapI RAATTY 6 cut(s) 299, 465, 474, 698, 862, 1618
XcmI CCANNNNNNNNNTGG 1 cut(s) 562
XmiI GTMKAC 2 cut(s) 488, 1181
XspI CTAG 4 cut(s) 173, 446, 713, 1160
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.