RLG00000026244

Cyclic nucleotide-gated ion channel 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
OG0000119
Physical Location & Seq
Forward (+)
1535164 .. 1542167
7004 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000026244

Sequence Viewer

Length: 1704 bp
ATGGCTATTAATCCAGACGACAGCTTCATCATAAGTAAAGGGAGGCTGCAATCTCCTAAGACTCCTACGAACAGTGGAGGACATTCAATATTTTCAGAGACGAAATGGCCTACTTTTAAGGAATTTTTTTACCCCCAGGGGGCCTTCATTGCAATGTGGTATAAGATATTTGTGATTTCATGTCTGATTTCAGTAACCGCAGACCCTTTGTTCTTCTACATCCCCTACATCAACAAAGATAAAAAGTGCATTGATGGGGACAAGAGCGTGAGAACTGCAGCTCTAGTCTTCCGATCACTCACCGATATGACTTTCATAATGCATATTATACATGAAATTCGTGTTAGTACCAACACTCTGGTGTCAGAGATATCAAAAAGAGGAAAGCCAGGTTGGCCATGGAAAAAGGCGGAGTTACTTGGGTTTGCCAAGGCAATATCTCAGAAGATGTCCTGGTTATCTATCTCCATCATAATAGACTTCATAGCCATTCTTCCGATCCCACAAGTGGCACTATTGGTATTCTTTCTGAAAATGGATGGCTCTGACTGCAAAAGGAGGATTTTAAACGGGCTCCTTCTCTTTCAATATATGCCAAAGATTTATAGAATCTACCTTTCGTGTAAAGAACTTAAACAAACCGGAATATGGGCTAGAGGTGCATTCAATATTTTTCTCTACATCCTCGCCAGTCATGTACTTGGAGCCTTTTGGTATTTCCTTTCTGTTCAACGAGAGACATCATGCTGGCATGAGGCTTGTGAACAAGATCCTGATACCATAAGATGTATATCAACTTACTACTGTGAGACAGACCTACAGATCCACAATATATTACACACACTCAACAAAGTTTTCCAAGAAGTTTTTTTACTCTTTCTGGTGGGGTTTGCGAAATCTAAGACGTATATACAGTTGGCAACTACGAAATCGGAAGAGATAAGACAGAAGATGATAATGAAAGAGCTAGAGATACAATGGTGGATGTCCAGAAATCTTCTCCCTAACGATATGAAGACAGTGATCTTCGAAAACGTAAGACAGAAATTGGAAGAAAACAAAGATGTTCATGTGGAGAATCTACTCTCTATTCTTCCCCGGAAGGACAGAAGGTCCATAAAGCGCCTTCTCTGCATGGACTCACTTAAGAAAGTACCGATGCTTCGATATATGGATGAAAGTGTGTTAAAACTCATCTGCGACAATCTGAAACCAGTAATCTACACAGAGAACAGTTATGTAATTCCAGCAGGAGAACCACTTGATCTAATGCTCTTCAACGCAGAAGGCATTATATGGACTTACACAACAAGTACTGATGGTTCAATAAAATTGGGTTGCTCAATCACTCGGTGTCTTGGTAAAGGTGATTTCTATGGAGAAGAACTTTTGAGTTGGGCTTCCTCATACATGTCCTTCTCCGACCCCCCTATCTCGACCCAAAATGTAAAATGCCATACAAAAGTTGAAGCCTTTTCTCTCATGGCAAAGGACTTGAAGGCTGTGGTCTCCAAATTCTGGTGGCATTTCAGCAGGGCGGTTCCCGATTTGAACAAAAACAATTCTCTGCTGGAGGAATTGGCTCTTTCTTCCCTAAGAGCCCGTCGCCGCAATCGATCAAAGAAGCATATAAAAGCTCCTCAATTGTCTACTTACTCCCAAGAACTTGGGTACCTGCGGCTGTACCCTGTTGATCGTTGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
Ion_trans

Protein Analysis

568

Amino Acids

65.62

Weight (kDa)

9.21

Isoelectric Point (pI)

51.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ion_trans PF00520 53 - 265 9.2e-06 Ion transport protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000119)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g10570 FvH4_4g36390 FvH4_7g31840 FvH4_7g31840 FvH4_7g31850 FvH4_7g31850 FvH4_7g31861 FvH4_7g31861 FvH4_7g31950
malus_domestica MD01G1054600.v1.1 MD01G1221100.v1.1 MD01G1221400.v1.1 MD01G1221600.v1.1 MD01G1221800.v1.1 MD01G1222000.v1.1 MD01G1222100.v1.1 MD07G1140800.v1.1 MD07G1291200.v1.1 MD07G1291400.v1.1 MD07G1291500.v1.1 MD07G1291700.v1.1 MD07G1292500.v1.1 MD07G1292700.v1.1 MD07G1292800.v1.1 MD07G1292900.v1.1 MD08G1241600.v1.1 MD11G1083800.v1.1 MD15G1431600.v1.1
prunus_persica Prupe.1G017800_v2.0.a1 Prupe.1G017800_v2.0.a1 Prupe.1G162800_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312700_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G143000_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1
pyrus_communis pycom01g23050 pycom01g23070 pycom01g23090 pycom01g23100 pycom01g23110 pycom01g23120 pycom01g23170 pycom07g26410 pycom07g26440 pycom07g26470 pycom07g26480 pycom07g26490 pycom07g26500 pycom07g26510 pycom07g26530 pycom07g26540 pycom07g26570 pycom07g26580 pycom07g26590 pycom08g20940
rosa_chinensis RchiOBHm_Chr1g0324571 RchiOBHm_Chr1g0336181 RchiOBHm_Chr1g0381061 RchiOBHm_Chr1g0381091 RchiOBHm_Chr1g0381121 RchiOBHm_Chr1g0381131 RchiOBHm_Chr1g0381141 RchiOBHm_Chr1g0381161 RchiOBHm_Chr1g0381211 RchiOBHm_Chr2g0110361 RchiOBHm_Chr2g0120231 RchiOBHm_Chr3g0486281 RchiOBHm_Chr3g0486311 RchiOBHm_Chr3g0486401 RchiOBHm_Chr4g0409511 RchiOBHm_Chr4g0409521 RchiOBHm_Chr5g0017271 RchiOBHm_Chr5g0048781 RchiOBHm_Chr5g0048811
rosa_laevigata RLG00000002401 RLG00000008559 RLG00000017798 RLG00000017799 RLG00000023082 RLG00000023088 RLG00000026230 RLG00000026238 RLG00000026240 RLG00000026241 RLG00000026242 RLG00000026243 RLG00000026244 RLG00000026246 RLG00000026247 RLG00000026248 RLG00000029876 RLG00000030189 RLG00000034579
rosa_multiflora Rmu_co8101374.1_g000001 Rmu_co8309149.1_g000001 Rmu_co8450063.1_g000001 Rmu_sc0000441.1_g000094 Rmu_sc0000479.1_g000005 Rmu_sc0000647.1_g000006 Rmu_sc0001393.1_g000031 Rmu_sc0001423.1_g000037 Rmu_sc0001616.1_g000015 Rmu_sc0001857.1_g000011 Rmu_sc0002183.1_g000013 Rmu_sc0002183.1_g000028 Rmu_sc0002183.1_g000030 Rmu_sc0002688.1_g000003 Rmu_sc0002688.1_g000020 Rmu_sc0003801.1_g000003 Rmu_sc0003801.1_g000004 Rmu_sc0004125.1_g000006 Rmu_sc0004494.1_g000005 Rmu_sc0004494.1_g000006 Rmu_sc0004494.1_g000008 Rmu_sc0004494.1_g000009 Rmu_sc0005842.1_g000004 Rmu_sc0006872.1_g000001 Rmu_sc0006872.1_g000005 Rmu_sc0006872.1_g000009 Rmu_sc0006872.1_g000010 Rmu_sc0008053.1_g000026
rosa_roxburghii Rroxscaffold_159G00432960 Rroxscaffold_1G00033060 Rroxscaffold_2G00123150 Rroxscaffold_2G00123170 Rroxscaffold_2G00133500 Rroxscaffold_2G00133550 Rroxscaffold_4G00278650 Rroxscaffold_4G00278750 Rroxscaffold_4G00278790 Rroxscaffold_4G00278800 Rroxscaffold_4G00278810 Rroxscaffold_4G00325390 Rroxscaffold_5G00354010 Rroxscaffold_6G00395890 Rroxscaffold_6G00395900 Rroxscaffold_6G00395920
rosa_rugosa Rorug01G0046900.1 Rorug01G0427000 Rorug01G0427100 Rorug01G0427200 Rorug01G0427300 Rorug01G0427400 Rorug01G0427500 Rorug01G0427500 Rorug01G0427600 Rorug01G0427600 Rorug01G0427700 Rorug01G0427700 Rorug01G0427800 Rorug01G0428700 Rorug02G0166400 Rorug02G0166500 Rorug02G0166500 Rorug02G0166600 Rorug02G0166600 Rorug02G0166700 Rorug02G0167300 Rorug02G0167300 Rorug02G0167300 Rorug03G0224600 Rorug03G0224600 Rorug04G0094400 Rorug05G0241100 Rorug05G0241200
rosa_samantha Rh1BG407700 Rh1BG407900 Rh1BG409000 Rh1CG064700 Rh1CG420900 Rh1CG421000 Rh1CG421200 Rh1CG421300 Rh1CG421800 Rh1CG421900 Rh1CG422000 Rh1CG422200 Rh1CG422300 Rh1CG423600 Rh1DG437600 Rh1DG438900 Rh1DG439000 Rh1DG440300 Rh2AG219100 Rh2CG220700 Rh2DG225300 Rh3AG274400 Rh3AG274600 Rh3CG308900 Rh3DG305800 Rh4AG156400 Rh5AG129000 Rh5AG320900 Rh5CG139600
rosa_wichuraiana Rw1G005300 Rw1G039280 Rw1G039300 Rw1G039310 Rw1G039320 Rw1G039330 Rw1G039340 Rw1G039360 Rw1G039390 Rw2G016910 Rw2G022800 Rw3G024330 Rw3G024340 Rw3G024350 Rw3G024400 Rw4G012810 Rw5G030120 Rw5G030280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1683
Acc65I GGTACC 1 cut(s) 1671
AccB1I GGYRCC 1 cut(s) 1671
AccB7I CCANNNNNTGG 1 cut(s) 1518
AccI GTMKAC 1 cut(s) 1649
AciI CCGC 5 cut(s) 198, 410, 1538, 1609, 1678
AclWI GGATC 3 cut(s) 493, 764, 817
AcoI YGGCCR 1 cut(s) 395
AcsI RAATTY 3 cut(s) 122, 336, 1514
AdeI CACNNNGTG 1 cut(s) 1353
AfaI GTAC 6 cut(s) 349, 699, 1155, 1315, 1673, 1685
AfiI CCNNNNNNNGG 4 cut(s) 139, 508, 648, 1518
AflII CTTAAG 1 cut(s) 1145
AflIII ACRYGT 1 cut(s) 1410
AgsI TTSAA 9 cut(s) 87, 587, 667, 731, 1279, 1326, 1469, 1498, 1552
AhdI GACNNNNNGTC 1 cut(s) 1111
AjnI CCWGG 3 cut(s) 135, 388, 452
AjuI GAANNNNNNNTTGG 2 cut(s) 376, 408
AleI CACNNNNGTG 1 cut(s) 359
AluBI AGCT 4 cut(s) 24, 281, 967, 1637
AluI AGCT 4 cut(s) 24, 281, 967, 1637
Alw26I GTCTC 4 cut(s) 92, 731, 803, 1513
AlwI GGATC 3 cut(s) 493, 764, 817
AoxI GGCC 3 cut(s) 107, 141, 395
ApeKI GCWGC 2 cut(s) 46, 278
ApoI RAATTY 3 cut(s) 122, 336, 1514
AseI ATTAAT 1 cut(s) 9
Asp718I GGTACC 1 cut(s) 1671
AspLEI GCGC 1 cut(s) 1125
AspS9I GGNCC 2 cut(s) 141, 1113
AsuC2I CCSGG 1 cut(s) 1099
AsuHPI GGTGA 2 cut(s) 292, 1379
AsuII TTCGAA 1 cut(s) 1029
AvaII GGWCC 1 cut(s) 1113
BaeI ACNNNNGTAYC 4 cut(s) 965, 998, 1655, 1688
BalI TGGCCA 1 cut(s) 397
BanI GGYRCC 1 cut(s) 1671
BanII GRGCYC 2 cut(s) 576, 1603
BarI GAAGNNNNNNTAC 4 cut(s) 855, 887, 1146, 1178
BbsI GAAGAC 2 cut(s) 280, 1022
BbvI GCAGC 2 cut(s) 33, 290
BccI CCATC 4 cut(s) 248, 476, 533, 1313
BciT130I CCWGG 3 cut(s) 137, 390, 454
BcnI CCSGG 1 cut(s) 1099
BcoDI GTCTC 4 cut(s) 92, 731, 803, 1513
BfaI CTAG 3 cut(s) 284, 654, 968
BfmI CTRYAG 2 cut(s) 276, 818
BfoI RGCGCY 1 cut(s) 1126
BfrI CTTAAG 1 cut(s) 1145
BfuAI ACCTGC 1 cut(s) 1683
BglI GCCNNNNNGGC 1 cut(s) 394
BisI GCNGC 4 cut(s) 47, 279, 1609, 1679
BlsI GCNGC 4 cut(s) 48, 280, 1610, 1680
BmcAI AGTACT 1 cut(s) 1315
Bme1390I CCNGG 4 cut(s) 137, 390, 454, 1099
Bme18I GGWCC 1 cut(s) 1113
BmeRI GACNNNNNGTC 1 cut(s) 1111
BmgT120I GGNCC 2 cut(s) 141, 1113
BmiI GGNNCC 5 cut(s) 142, 575, 706, 1542, 1673
BmrFI CCNGG 4 cut(s) 137, 390, 454, 1099
BmsI GCATC 1 cut(s) 1149
BpiI GAAGAC 2 cut(s) 280, 1022
BpmI CTGGAG 1 cut(s) 1592
Bpu14I TTCGAA 1 cut(s) 1029
BpuMI CCSGG 1 cut(s) 1099
Bsa29I ATCGAT 1 cut(s) 1615
BsaBI GATNNNNATC 1 cut(s) 790
BsaI GGTCTC 1 cut(s) 1513
BsaJI CCNNGG 5 cut(s) 135, 136, 398, 429, 1097
BsaWI WCCGGW 1 cut(s) 641
Bsc4I CCNNNNNNNGG 4 cut(s) 139, 508, 648, 1518
Bse1I ACTGG 2 cut(s) 690, 1214
Bse3DI GCAATG 2 cut(s) 147, 159
Bse8I GATNNNNATC 1 cut(s) 790
BseBI CCWGG 3 cut(s) 137, 390, 454
BseCI ATCGAT 1 cut(s) 1615
BseDI CCNNGG 5 cut(s) 135, 136, 398, 429, 1097
BseGI GGATG 5 cut(s) 219, 544, 681, 990, 1180
BseJI GATNNNNATC 1 cut(s) 790
BseLI CCNNNNNNNGG 4 cut(s) 139, 508, 648, 1518
BseMI GCAATG 2 cut(s) 147, 159
BseMII CTCAG 1 cut(s) 455
BseNI ACTGG 2 cut(s) 690, 1214
BseRI GAGGAG 1 cut(s) 1629
BseXI GCAGC 2 cut(s) 33, 290
BshFI GGCC 3 cut(s) 109, 143, 397
BshNI GGYRCC 1 cut(s) 1671
BshVI ATCGAT 1 cut(s) 1615
BsiSI CCGG 2 cut(s) 642, 1099
BslFI GGGAC 1 cut(s) 272
BslI CCNNNNNNNGG 4 cut(s) 139, 508, 648, 1518
BsmAI GTCTC 4 cut(s) 92, 731, 803, 1513
BsmBI CGTCTC 1 cut(s) 92
BsmFI GGGAC 1 cut(s) 272
BsmI GAATGC 1 cut(s) 662
BsnI GGCC 3 cut(s) 109, 143, 397
Bso31I GGTCTC 1 cut(s) 1513
Bsp119I TTCGAA 1 cut(s) 1029
Bsp1286I GDGCHC 2 cut(s) 576, 1603
Bsp143I GATC 8 cut(s) 293, 498, 769, 822, 1023, 1264, 1616, 1693
Bsp19I CCATGG 1 cut(s) 398
BspACI CCGC 5 cut(s) 198, 410, 1538, 1609, 1678
BspANI GGCC 3 cut(s) 109, 143, 397
BspCNI CTCAG 1 cut(s) 454
BspDI ATCGAT 1 cut(s) 1615
BspLI GGNNCC 5 cut(s) 142, 575, 706, 1542, 1673
BspMAI CTGCAG 1 cut(s) 280
BspMI ACCTGC 1 cut(s) 1683
BspPI GGATC 3 cut(s) 493, 764, 817
BspQI GCTCTTC 1 cut(s) 1280
BspT104I TTCGAA 1 cut(s) 1029
BspT107I GGYRCC 1 cut(s) 1671
BspTI CTTAAG 1 cut(s) 1145
BspTNI GGTCTC 1 cut(s) 1513
BsrDI GCAATG 2 cut(s) 147, 159
BsrI ACTGG 2 cut(s) 690, 1214
BssECI CCNNGG 5 cut(s) 135, 136, 398, 429, 1097
BssMI GATC 8 cut(s) 293, 498, 769, 822, 1023, 1264, 1616, 1693
BssT1I CCWWGG 2 cut(s) 398, 429
Bst2UI CCWGG 3 cut(s) 137, 390, 454
Bst4CI ACNGT 5 cut(s) 74, 806, 915, 1021, 1235
Bst6I CTCTTC 2 cut(s) 930, 1280
BstAFI CTTAAG 1 cut(s) 1145
BstBI TTCGAA 1 cut(s) 1029
BstC8I GCNNGC 1 cut(s) 749
BstDEI CTNAG 4 cut(s) 57, 441, 900, 1595
BstDSI CCRYGG 1 cut(s) 398
BstF5I GGATG 5 cut(s) 219, 544, 681, 990, 1180
BstH2I RGCGCY 1 cut(s) 1126
BstHHI GCGC 1 cut(s) 1125
BstKTI GATC 8 cut(s) 296, 501, 772, 825, 1026, 1267, 1619, 1696
BstMAI GTCTC 4 cut(s) 92, 731, 803, 1513
BstMBI GATC 8 cut(s) 293, 498, 769, 822, 1023, 1264, 1616, 1693
BstMWI GCNNNNNNNGC 5 cut(s) 149, 394, 549, 659, 1131
BstNI CCWGG 3 cut(s) 137, 390, 454
BstNSI RCATGY 1 cut(s) 1414
BstSCI CCNGG 4 cut(s) 135, 388, 452, 1097
BstSFI CTRYAG 2 cut(s) 276, 818
BstV1I GCAGC 2 cut(s) 33, 290
BstV2I GAAGAC 2 cut(s) 280, 1022
BstX2I RGATCY 2 cut(s) 769, 822
BstXI CCANNNNNNTGG 2 cut(s) 358, 1667
BstYI RGATCY 2 cut(s) 769, 822
Bsu15I ATCGAT 1 cut(s) 1615
BsuRI GGCC 3 cut(s) 109, 143, 397
BsuTUI ATCGAT 1 cut(s) 1615
BtgI CCRYGG 1 cut(s) 398
BtsCI GGATG 5 cut(s) 219, 544, 681, 990, 1180
BtsIMutI CAGTG 2 cut(s) 79, 1026
BveI ACCTGC 1 cut(s) 1683
Cac8I GCNNGC 1 cut(s) 749
CfoI GCGC 1 cut(s) 1125
Cfr13I GGNCC 2 cut(s) 141, 1113
ClaI ATCGAT 1 cut(s) 1615
Csp6I GTAC 6 cut(s) 348, 698, 1154, 1314, 1672, 1684
CviQI GTAC 6 cut(s) 348, 698, 1154, 1314, 1672, 1684
DdeI CTNAG 4 cut(s) 57, 441, 900, 1595
DpnI GATC 8 cut(s) 295, 500, 771, 824, 1025, 1266, 1618, 1695
DpnII GATC 8 cut(s) 293, 498, 769, 822, 1023, 1264, 1616, 1693
DraI TTTAAA 1 cut(s) 567
DraIII CACNNNGTG 1 cut(s) 1353
DriI GACNNNNNGTC 1 cut(s) 1111
EaeI YGGCCR 1 cut(s) 395
Eam1104I CTCTTC 2 cut(s) 930, 1280
Eam1105I GACNNNNNGTC 1 cut(s) 1111
EarI CTCTTC 2 cut(s) 930, 1280
EciI GGCGGA 1 cut(s) 425
Eco130I CCWWGG 2 cut(s) 398, 429
Eco24I GRGCYC 2 cut(s) 576, 1603
Eco31I GGTCTC 1 cut(s) 1513
Eco32I GATATC 1 cut(s) 372
Eco47I GGWCC 1 cut(s) 1113
EcoO109I RGGNCCY 1 cut(s) 141
EcoRII CCWGG 3 cut(s) 135, 388, 452
EcoRV GATATC 1 cut(s) 372
EcoT14I CCWWGG 2 cut(s) 398, 429
EcoT22I ATGCAT 1 cut(s) 324
EcoT38I GRGCYC 2 cut(s) 576, 1603
ErhI CCWWGG 2 cut(s) 398, 429
Esp3I CGTCTC 1 cut(s) 92
FaqI GGGAC 1 cut(s) 272
FblI GTMKAC 1 cut(s) 1649
Fnu4HI GCNGC 4 cut(s) 47, 279, 1609, 1679
FokI GGATG 5 cut(s) 206, 551, 668, 997, 1187
FriOI GRGCYC 2 cut(s) 576, 1603
Fsp4HI GCNGC 4 cut(s) 47, 279, 1609, 1679
FspBI CTAG 3 cut(s) 284, 654, 968
GlaI GCGC 1 cut(s) 1124
GluI GCNGC 4 cut(s) 47, 279, 1609, 1679
GsuI CTGGAG 1 cut(s) 1592
HaeII RGCGCY 1 cut(s) 1126
HaeIII GGCC 3 cut(s) 109, 143, 397
HapII CCGG 2 cut(s) 642, 1099
HhaI GCGC 1 cut(s) 1125
Hin6I GCGC 1 cut(s) 1123
HinP1I GCGC 1 cut(s) 1123
HinfI GANTC 4 cut(s) 61, 609, 1078, 1139
HpaII CCGG 2 cut(s) 642, 1099
HphI GGTGA 2 cut(s) 292, 1379
Hpy166II GTNNAC 2 cut(s) 764, 1650
Hpy188III TCNNGA 5 cut(s) 14, 773, 990, 1435, 1544
Hpy8I GTNNAC 2 cut(s) 764, 1650
Hpy99I CGWCG 1 cut(s) 1608
HpyAV CCTTC 8 cut(s) 154, 587, 1096, 1104, 1136, 1280, 1426, 1492
HpyCH4III ACNGT 5 cut(s) 74, 806, 915, 1021, 1235
HpyCH4IV ACGT 2 cut(s) 905, 1035
HpyCH4V TGCA 8 cut(s) 49, 152, 249, 278, 322, 552, 662, 1134
HpyF10VI GCNNNNNNNGC 5 cut(s) 149, 394, 549, 659, 1131
HpyF3I CTNAG 4 cut(s) 57, 441, 900, 1595
HpySE526I ACGT 2 cut(s) 905, 1035
HspAI GCGC 1 cut(s) 1123
KpnI GGTACC 1 cut(s) 1675
Kzo9I GATC 8 cut(s) 293, 498, 769, 822, 1023, 1264, 1616, 1693
LguI GCTCTTC 1 cut(s) 1280
LmnI GCTCC 3 cut(s) 579, 704, 1642
Lsp1109I GCAGC 2 cut(s) 33, 290
LweI GCATC 1 cut(s) 1149
MaeI CTAG 3 cut(s) 284, 654, 968
MaeII ACGT 2 cut(s) 905, 1035
MaeIII GTNAC 2 cut(s) 193, 414
MalI GATC 8 cut(s) 295, 500, 771, 824, 1025, 1266, 1618, 1695
MboI GATC 8 cut(s) 293, 498, 769, 822, 1023, 1264, 1616, 1693
MfeI CAATTG 1 cut(s) 1643
MflI RGATCY 2 cut(s) 769, 822
MhlI GDGCHC 2 cut(s) 576, 1603
MlsI TGGCCA 1 cut(s) 397
MluCI AATT 9 cut(s) 122, 336, 1046, 1242, 1331, 1514, 1561, 1577, 1643
MluNI TGGCCA 1 cut(s) 397
MlyI GAGTC 2 cut(s) 55, 1133
MmeI TCCRAC 1 cut(s) 1446
Mox20I TGGCCA 1 cut(s) 397
Mph1103I ATGCAT 1 cut(s) 324
MscI TGGCCA 1 cut(s) 397
MseI TTAA 6 cut(s) 9, 117, 566, 633, 1146, 1187
MslI CAYNNNNRTG 3 cut(s) 152, 305, 359
Msp20I TGGCCA 1 cut(s) 397
MspCI CTTAAG 1 cut(s) 1145
MspI CCGG 2 cut(s) 642, 1099
MspR9I CCNGG 4 cut(s) 137, 390, 454, 1099
MunI CAATTG 1 cut(s) 1643
Mva1269I GAATGC 1 cut(s) 662
MvaI CCWGG 3 cut(s) 137, 390, 454
MwoI GCNNNNNNNGC 5 cut(s) 149, 394, 549, 659, 1131
NciI CCSGG 1 cut(s) 1099
NcoI CCATGG 1 cut(s) 398
NdeII GATC 8 cut(s) 293, 498, 769, 822, 1023, 1264, 1616, 1693
NlaIV GGNNCC 5 cut(s) 142, 575, 706, 1542, 1673
NsiI ATGCAT 1 cut(s) 324
NspI RCATGY 1 cut(s) 1414
NspV TTCGAA 1 cut(s) 1029
OliI CACNNNNGTG 1 cut(s) 359
PasI CCCWGGG 1 cut(s) 136
PciI ACATGT 1 cut(s) 1410
PciSI GCTCTTC 1 cut(s) 1280
PcsI WCGNNNNNNNCGW 1 cut(s) 1612
PctI GAATGC 1 cut(s) 662
PfeI GAWTC 2 cut(s) 609, 1078
PflMI CCANNNNNTGG 1 cut(s) 1518
PkrI GCNGC 4 cut(s) 48, 280, 1610, 1680
PleI GAGTC 2 cut(s) 55, 1133
PpsI GAGTC 2 cut(s) 55, 1133
PscI ACATGT 1 cut(s) 1410
PshBI ATTAAT 1 cut(s) 9
Psp6I CCWGG 3 cut(s) 135, 388, 452
PspGI CCWGG 3 cut(s) 135, 388, 452
PspN4I GGNNCC 5 cut(s) 142, 575, 706, 1542, 1673
PspPI GGNCC 2 cut(s) 141, 1113
PsrI GAACNNNNNNTAC 2 cut(s) 1306, 1338
PstI CTGCAG 1 cut(s) 280
PsuI RGATCY 2 cut(s) 769, 822
RsaI GTAC 6 cut(s) 349, 699, 1155, 1315, 1673, 1685
RsaNI GTAC 6 cut(s) 348, 698, 1154, 1314, 1672, 1684
RseI CAYNNNNRTG 3 cut(s) 152, 305, 359
SapI GCTCTTC 1 cut(s) 1280
SaqAI TTAA 6 cut(s) 9, 117, 566, 633, 1146, 1187
SatI GCNGC 4 cut(s) 47, 279, 1609, 1679
Sau3AI GATC 8 cut(s) 293, 498, 769, 822, 1023, 1264, 1616, 1693
Sau96I GGNCC 2 cut(s) 141, 1113
ScaI AGTACT 1 cut(s) 1315
SchI GAGTC 2 cut(s) 55, 1133
ScrFI CCNGG 4 cut(s) 137, 390, 454, 1099
SduI GDGCHC 2 cut(s) 576, 1603
SfaNI GCATC 1 cut(s) 1149
SfcI CTRYAG 2 cut(s) 276, 818
SfuI TTCGAA 1 cut(s) 1029
SinI GGWCC 1 cut(s) 1113
SmiMI CAYNNNNRTG 3 cut(s) 152, 305, 359
SmlI CTYRAG 1 cut(s) 1145
SmoI CTYRAG 1 cut(s) 1145
Sse9I AATT 9 cut(s) 122, 336, 1046, 1242, 1331, 1514, 1561, 1577, 1643
SsiI CCGC 5 cut(s) 198, 410, 1538, 1609, 1678
SspI AATATT 2 cut(s) 90, 670
SspMI CTAG 3 cut(s) 284, 654, 968
StyD4I CCNGG 4 cut(s) 135, 388, 452, 1097
StyI CCWWGG 2 cut(s) 398, 429
TaaI ACNGT 5 cut(s) 74, 806, 915, 1021, 1235
TaiI ACGT 2 cut(s) 908, 1038
TaqI TCGA 4 cut(s) 1029, 1165, 1436, 1615
TasI AATT 9 cut(s) 122, 336, 1046, 1242, 1331, 1514, 1561, 1577, 1643
TatI WGTACW 2 cut(s) 697, 1313
TauI GCSGC 2 cut(s) 1611, 1681
TfiI GAWTC 2 cut(s) 609, 1078
Tru1I TTAA 6 cut(s) 9, 117, 566, 633, 1146, 1187
Tru9I TTAA 6 cut(s) 9, 117, 566, 633, 1146, 1187
TscAI CASTG 2 cut(s) 79, 1026
TseI GCWGC 2 cut(s) 46, 278
TspRI CASTG 2 cut(s) 79, 1026
Van91I CCANNNNNTGG 1 cut(s) 1518
Vha464I CTTAAG 1 cut(s) 1145
VpaK11BI GGWCC 1 cut(s) 1113
VspI ATTAAT 1 cut(s) 9
XapI RAATTY 3 cut(s) 122, 336, 1514
XceI RCATGY 1 cut(s) 1414
XcmI CCANNNNNNNNNTGG 1 cut(s) 396
XmiI GTMKAC 1 cut(s) 1649
XspI CTAG 3 cut(s) 284, 654, 968
ZrmI AGTACT 1 cut(s) 1315
Zsp2I ATGCAT 1 cut(s) 324
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.