MD01G1054600.v1.1

Cyclic nucleotide-gated ion channel 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr01
OG0000119
Physical Location & Seq
Forward (+)
15902212 .. 15906004
3793 bp
Loading structure...
UTR
Exon/CDS
Intron
MD01G1054600.v1.1.491

Sequence Viewer

Length: 1776 bp
ATGTTTGTATTCTTTCTGGCTAACTCCAATGACTTTGATTTTTCCTTTTTGTATATCAGCTTTCGACGAGGCTATTACTCGGGAGATCTTCCGACAACCATAAATTCTGCTACCACGTCGACAGATGCAGAAGATTCAGATCAGACGGAGGAGAAAAAAAATGAAGAAAATATTCCACCGAAGAATTTGATATTTGTAATTGCATGCATGGTTGCAATCTCAATAGATCCCTTGTTTTTGTACATTCCTATCATCGATGGCGAAAGTAAGTGCCTTGGAGTGGACAAAAAGTTGAGGATCATAACTCTTCTTTTCCGATCACTCATAGATATCATTTACATAGTGCATATTACATATCAAATTCGTCAAGCTATTAAGTCCGCATTACCTGAAGACCAGTCTCATCCCAACGAACAAACACTTACTTCAAGTACTTGGAAGTCGAAGTTTTTCGATTTATTTGAACGTCGTGATAAAACATTTGAGTTCTCATGGACCTCGATCATAATTGACGTTCTAGCTGTTCTTCCAATCCCACAAGTGTTACTAGGAGCTGTTTATTTCAAAATGGGAGGCTCTAGATATTTGGATAACATAAAGATTGTGAATTTCTTTCTTCTCGTCCAATATCTGCCAAGGTTCTATGAAATTTACCTAGCTGCTACGAAATTTAGGAAAAACACTCCGGTGTGGATTAAAGGTGCTTTCAACTTTTTTCTGTACATCATTGCTAGTCATGTACTTGGAGCCTTTAGGTACTTCTTCTCTATTGAACGGGAAACAGCGTGTTGGCACCAGGCATGCAGAAACACTGCAGGATGTAAAGCCAGTTTCTATTGCGATGACAATATTTCAATGAATGTCACAACATTGCTTACTGAATTCTGTCCCACAAATCCACTAAATTCTACAGTATTTGACTTTGGAATATTTTCTAAAGGAATTGAGTCTGGAAATACCGGACGAATAAGTTTTTTGACAAAGCTCTTTTACTCTTGGTCCTGGGGTATCCTAAATCTAAGTAATTTTGGCACCAGTCTGACAACAAGTTCCTACGTGTGGGAGAACCTCTTTGCAATTCTTATTTCCGCTATTGGGTTGCTATTATTTTCTTATCTTATTGGAAACGTGCAGGAAAAGAAAGTGCAAGAACCGAAGCGGAAGATCATAATGGAAGGTCTAAGAGCGTGGCTCTCCGAAAACAATCTCCGTCCAGATTTGGAGAAAGAAGTCGTAAAAAACATAAAACAAGCAATTGAACTAGACAAGGATGCAGATGTCGATAATCTGTTCTCTCTTCTTCCATGGAGTACCAGACTAGAGCTAAAGCGTTCTCTTTTCAAGCCAATGATTAAATTACCAAGGCTACGAAATATGGATGAGAAAGTGCGGGAAATGATATGTGACTATCTCAAGCCAGTGGTGTACCCTCAGAACACCATCGTTCGTCGAACGGGAGAACCATTTGATAGCATTCTCTTCGTTACAGAAGGCATTGTGTGGGTTTACTCGACCACTGATGGAAGTCAGCAGACTGGAATGATGAACCAATTCCTTAAGAAAGGTGATGTTTATGGAGACGAAGAACTTCTGAGTTGGACAACATCCCACAGTGGCAGCCGCTCCTTTACAAATCTTCCGTTCTCGAAGGAAAATGTGAAATGTCACACAAAGGTACAAGGCTTTGCTCTCAGTGCTATGGACTTGAAAACTGTAGTTTCCAAATGTGGAGATTTCTGGAACCCTAGTAAGACCACTACTCTAGTGCTGGTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
Ion_trans

Protein Analysis

592

Amino Acids

67.79

Weight (kDa)

7.9

Isoelectric Point (pI)

36.3

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000119)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g10570 FvH4_4g36390 FvH4_7g31840 FvH4_7g31840 FvH4_7g31850 FvH4_7g31850 FvH4_7g31861 FvH4_7g31861 FvH4_7g31950
malus_domestica MD01G1054600.v1.1 MD01G1221100.v1.1 MD01G1221400.v1.1 MD01G1221600.v1.1 MD01G1221800.v1.1 MD01G1222000.v1.1 MD01G1222100.v1.1 MD07G1140800.v1.1 MD07G1291200.v1.1 MD07G1291400.v1.1 MD07G1291500.v1.1 MD07G1291700.v1.1 MD07G1292500.v1.1 MD07G1292700.v1.1 MD07G1292800.v1.1 MD07G1292900.v1.1 MD08G1241600.v1.1 MD11G1083800.v1.1 MD15G1431600.v1.1
prunus_persica Prupe.1G017800_v2.0.a1 Prupe.1G017800_v2.0.a1 Prupe.1G162800_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312700_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G143000_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1
pyrus_communis pycom01g23050 pycom01g23070 pycom01g23090 pycom01g23100 pycom01g23110 pycom01g23120 pycom01g23170 pycom07g26410 pycom07g26440 pycom07g26470 pycom07g26480 pycom07g26490 pycom07g26500 pycom07g26510 pycom07g26530 pycom07g26540 pycom07g26570 pycom07g26580 pycom07g26590 pycom08g20940
rosa_chinensis RchiOBHm_Chr1g0324571 RchiOBHm_Chr1g0336181 RchiOBHm_Chr1g0381061 RchiOBHm_Chr1g0381091 RchiOBHm_Chr1g0381121 RchiOBHm_Chr1g0381131 RchiOBHm_Chr1g0381141 RchiOBHm_Chr1g0381161 RchiOBHm_Chr1g0381211 RchiOBHm_Chr2g0110361 RchiOBHm_Chr2g0120231 RchiOBHm_Chr3g0486281 RchiOBHm_Chr3g0486311 RchiOBHm_Chr3g0486401 RchiOBHm_Chr4g0409511 RchiOBHm_Chr4g0409521 RchiOBHm_Chr5g0017271 RchiOBHm_Chr5g0048781 RchiOBHm_Chr5g0048811
rosa_laevigata RLG00000002401 RLG00000008559 RLG00000017798 RLG00000017799 RLG00000023082 RLG00000023088 RLG00000026230 RLG00000026238 RLG00000026240 RLG00000026241 RLG00000026242 RLG00000026243 RLG00000026244 RLG00000026246 RLG00000026247 RLG00000026248 RLG00000029876 RLG00000030189 RLG00000034579
rosa_multiflora Rmu_co8101374.1_g000001 Rmu_co8309149.1_g000001 Rmu_co8450063.1_g000001 Rmu_sc0000441.1_g000094 Rmu_sc0000479.1_g000005 Rmu_sc0000647.1_g000006 Rmu_sc0001393.1_g000031 Rmu_sc0001423.1_g000037 Rmu_sc0001616.1_g000015 Rmu_sc0001857.1_g000011 Rmu_sc0002183.1_g000013 Rmu_sc0002183.1_g000028 Rmu_sc0002183.1_g000030 Rmu_sc0002688.1_g000003 Rmu_sc0002688.1_g000020 Rmu_sc0003801.1_g000003 Rmu_sc0003801.1_g000004 Rmu_sc0004125.1_g000006 Rmu_sc0004494.1_g000005 Rmu_sc0004494.1_g000006 Rmu_sc0004494.1_g000008 Rmu_sc0004494.1_g000009 Rmu_sc0005842.1_g000004 Rmu_sc0006872.1_g000001 Rmu_sc0006872.1_g000005 Rmu_sc0006872.1_g000009 Rmu_sc0006872.1_g000010 Rmu_sc0008053.1_g000026
rosa_roxburghii Rroxscaffold_159G00432960 Rroxscaffold_1G00033060 Rroxscaffold_2G00123150 Rroxscaffold_2G00123170 Rroxscaffold_2G00133500 Rroxscaffold_2G00133550 Rroxscaffold_4G00278650 Rroxscaffold_4G00278750 Rroxscaffold_4G00278790 Rroxscaffold_4G00278800 Rroxscaffold_4G00278810 Rroxscaffold_4G00325390 Rroxscaffold_5G00354010 Rroxscaffold_6G00395890 Rroxscaffold_6G00395900 Rroxscaffold_6G00395920
rosa_rugosa Rorug01G0046900.1 Rorug01G0427000 Rorug01G0427100 Rorug01G0427200 Rorug01G0427300 Rorug01G0427400 Rorug01G0427500 Rorug01G0427500 Rorug01G0427600 Rorug01G0427600 Rorug01G0427700 Rorug01G0427700 Rorug01G0427800 Rorug01G0428700 Rorug02G0166400 Rorug02G0166500 Rorug02G0166500 Rorug02G0166600 Rorug02G0166600 Rorug02G0166700 Rorug02G0167300 Rorug02G0167300 Rorug02G0167300 Rorug03G0224600 Rorug03G0224600 Rorug04G0094400 Rorug05G0241100 Rorug05G0241200
rosa_samantha Rh1BG407700 Rh1BG407900 Rh1BG409000 Rh1CG064700 Rh1CG420900 Rh1CG421000 Rh1CG421200 Rh1CG421300 Rh1CG421800 Rh1CG421900 Rh1CG422000 Rh1CG422200 Rh1CG422300 Rh1CG423600 Rh1DG437600 Rh1DG438900 Rh1DG439000 Rh1DG440300 Rh2AG219100 Rh2CG220700 Rh2DG225300 Rh3AG274400 Rh3AG274600 Rh3CG308900 Rh3DG305800 Rh4AG156400 Rh5AG129000 Rh5AG320900 Rh5CG139600
rosa_wichuraiana Rw1G005300 Rw1G039280 Rw1G039300 Rw1G039310 Rw1G039320 Rw1G039330 Rw1G039340 Rw1G039360 Rw1G039390 Rw2G016910 Rw2G022800 Rw3G024330 Rw3G024340 Rw3G024350 Rw3G024400 Rw4G012810 Rw5G030120 Rw5G030280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 792, 1031
AccBSI CCGCTC 1 cut(s) 1623
AccI GTMKAC 1 cut(s) 119
AciI CCGC 5 cut(s) 381, 1089, 1159, 1390, 1621
AclWI GGATC 2 cut(s) 221, 305
AcsI RAATTY 8 cut(s) 103, 184, 360, 607, 648, 668, 881, 904
AcuI CTGAAG 1 cut(s) 411
AfaI GTAC 8 cut(s) 242, 433, 722, 741, 758, 1312, 1427, 1677
AfiI CCNNNNNNNGG 3 cut(s) 280, 1059, 1095
AflII CTTAAG 1 cut(s) 1556
AflIII ACRYGT 1 cut(s) 1056
AgsI TTSAA 9 cut(s) 429, 464, 565, 709, 773, 855, 1259, 1342, 1708
AjiI CACGTC 1 cut(s) 117
AjnI CCWGG 2 cut(s) 795, 1001
AleI CACNNNNGTG 1 cut(s) 686
AluBI AGCT 7 cut(s) 60, 371, 521, 554, 659, 985, 1324
AluI AGCT 7 cut(s) 60, 371, 521, 554, 659, 985, 1324
Alw26I GTCTC 2 cut(s) 405, 1572
AlwI GGATC 2 cut(s) 221, 305
Ama87I CYCGRG 1 cut(s) 79
ApeKI GCWGC 2 cut(s) 659, 1617
ApoI RAATTY 8 cut(s) 103, 184, 360, 607, 648, 668, 881, 904
Asp700I GAANNNNTTC 5 cut(s) 171, 449, 931, 1550, 1587
AspS9I GGNCC 2 cut(s) 495, 999
AsuHPI GGTGA 1 cut(s) 1577
AvaI CYCGRG 1 cut(s) 79
AvaII GGWCC 2 cut(s) 495, 999
BanI GGYRCC 2 cut(s) 792, 1031
BbsI GAAGAC 1 cut(s) 399
BbvI GCAGC 2 cut(s) 646, 1629
BccI CCATC 3 cut(s) 251, 1448, 1514
BcgI CGANNNNNNTGC 2 cut(s) 1462, 1496
BciT130I CCWGG 2 cut(s) 797, 1003
BciVI GTATCC 1 cut(s) 1019
BcoDI GTCTC 2 cut(s) 405, 1572
BfaI CTAG 9 cut(s) 518, 548, 579, 656, 732, 1262, 1319, 1746, 1763
BfmI CTRYAG 3 cut(s) 813, 909, 1713
BfrI CTTAAG 1 cut(s) 1556
BfuI GTATCC 1 cut(s) 1019
BglII AGATCT 1 cut(s) 85
BisI GCNGC 3 cut(s) 660, 1618, 1621
BlsI GCNGC 3 cut(s) 661, 1619, 1622
BmcAI AGTACT 1 cut(s) 433
Bme1390I CCNGG 2 cut(s) 797, 1003
Bme18I GGWCC 2 cut(s) 495, 999
BmeT110I CYCGRG 1 cut(s) 79
BmgBI CACGTC 1 cut(s) 117
BmgT120I GGNCC 2 cut(s) 495, 999
BmiI GGNNCC 4 cut(s) 748, 794, 1033, 1742
BmrFI CCNGG 2 cut(s) 797, 1003
BmsI GCATC 2 cut(s) 115, 1261
BpiI GAAGAC 1 cut(s) 399
BplI GAGNNNNNCTC 2 cut(s) 1176, 1208
BpuEI CTTGAG 1 cut(s) 1397
Bsa29I ATCGAT 1 cut(s) 255
BsaAI YACGTR 1 cut(s) 1057
BsaBI GATNNNNATC 1 cut(s) 138
BsaJI CCNNGG 5 cut(s) 274, 635, 1002, 1304, 1361
BsaWI WCCGGW 2 cut(s) 685, 959
Bsc4I CCNNNNNNNGG 3 cut(s) 280, 1059, 1095
Bse1I ACTGG 5 cut(s) 397, 828, 1035, 1418, 1540
Bse3DI GCAATG 2 cut(s) 726, 869
Bse8I GATNNNNATC 1 cut(s) 138
BseBI CCWGG 2 cut(s) 797, 1003
BseCI ATCGAT 1 cut(s) 255
BseDI CCNNGG 5 cut(s) 274, 635, 1002, 1304, 1361
BseGI GGATG 5 cut(s) 403, 824, 1276, 1384, 1604
BseJI GATNNNNATC 1 cut(s) 138
BseLI CCNNNNNNNGG 3 cut(s) 280, 1059, 1095
BseMI GCAATG 2 cut(s) 726, 869
BseMII CTCAG 3 cut(s) 1445, 1583, 1705
BseNI ACTGG 5 cut(s) 397, 828, 1035, 1418, 1540
BseRI GAGGAG 1 cut(s) 164
BseXI GCAGC 2 cut(s) 646, 1629
BsgI GTGCAG 1 cut(s) 1151
BshNI GGYRCC 2 cut(s) 792, 1031
BshVI ATCGAT 1 cut(s) 255
BsiHKCI CYCGRG 1 cut(s) 79
BsiSI CCGG 2 cut(s) 686, 960
BslFI GGGAC 1 cut(s) 873
BslI CCNNNNNNNGG 3 cut(s) 280, 1059, 1095
BsmAI GTCTC 2 cut(s) 405, 1572
BsmBI CGTCTC 1 cut(s) 1572
BsmFI GGGAC 1 cut(s) 873
BsmI GAATGC 1 cut(s) 1473
BsoBI CYCGRG 1 cut(s) 79
Bsp1407I TGTACA 2 cut(s) 240, 720
Bsp143I GATC 7 cut(s) 85, 139, 226, 297, 317, 501, 1164
Bsp19I CCATGG 1 cut(s) 1304
BspACI CCGC 5 cut(s) 381, 1089, 1159, 1390, 1621
BspCNI CTCAG 3 cut(s) 1444, 1584, 1704
BspDI ATCGAT 1 cut(s) 255
BspLI GGNNCC 4 cut(s) 748, 794, 1033, 1742
BspMAI CTGCAG 1 cut(s) 817
BspPI GGATC 2 cut(s) 221, 305
BspT107I GGYRCC 2 cut(s) 792, 1031
BspTI CTTAAG 1 cut(s) 1556
BsrBI CCGCTC 1 cut(s) 1623
BsrDI GCAATG 2 cut(s) 726, 869
BsrGI TGTACA 2 cut(s) 240, 720
BsrI ACTGG 5 cut(s) 397, 828, 1035, 1418, 1540
BssECI CCNNGG 5 cut(s) 274, 635, 1002, 1304, 1361
BssMI GATC 7 cut(s) 85, 139, 226, 297, 317, 501, 1164
BssT1I CCWWGG 4 cut(s) 274, 635, 1304, 1361
Bst2UI CCWGG 2 cut(s) 797, 1003
Bst4CI ACNGT 3 cut(s) 913, 1613, 1714
Bst6I CTCTTC 3 cut(s) 312, 1302, 1484
BstAFI CTTAAG 1 cut(s) 1556
BstAUI TGTACA 2 cut(s) 240, 720
BstBAI YACGTR 1 cut(s) 1057
BstC8I GCNNGC 2 cut(s) 205, 802
BstDEI CTNAG 5 cut(s) 1019, 1181, 1431, 1592, 1691
BstDSI CCRYGG 1 cut(s) 1304
BstF5I GGATG 5 cut(s) 403, 824, 1276, 1384, 1604
BstKTI GATC 7 cut(s) 88, 142, 229, 300, 320, 504, 1167
BstMAI GTCTC 2 cut(s) 405, 1572
BstMBI GATC 7 cut(s) 85, 139, 226, 297, 317, 501, 1164
BstMWI GCNNNNNNNGC 1 cut(s) 1694
BstNI CCWGG 2 cut(s) 797, 1003
BstNSI RCATGY 2 cut(s) 207, 804
BstSCI CCNGG 2 cut(s) 795, 1001
BstSFI CTRYAG 3 cut(s) 813, 909, 1713
BstV1I GCAGC 2 cut(s) 646, 1629
BstV2I GAAGAC 1 cut(s) 399
BstX2I RGATCY 2 cut(s) 85, 226
BstYI RGATCY 2 cut(s) 85, 226
Bsu15I ATCGAT 1 cut(s) 255
BsuI GTATCC 1 cut(s) 1019
BsuTUI ATCGAT 1 cut(s) 255
BtgI CCRYGG 1 cut(s) 1304
BtgZI GCGATG 1 cut(s) 855
BtrI CACGTC 1 cut(s) 117
BtsCI GGATG 5 cut(s) 403, 824, 1276, 1384, 1604
BtsI GCAGTG 1 cut(s) 810
BtsIMutI CAGTG 5 cut(s) 810, 1425, 1515, 1618, 1699
Cac8I GCNNGC 2 cut(s) 205, 802
Cfr13I GGNCC 2 cut(s) 495, 999
ClaI ATCGAT 1 cut(s) 255
Csp6I GTAC 8 cut(s) 241, 432, 721, 740, 757, 1311, 1426, 1676
CviAII CATG 6 cut(s) 204, 208, 492, 737, 801, 1305
CviQI GTAC 8 cut(s) 241, 432, 721, 740, 757, 1311, 1426, 1676
DdeI CTNAG 5 cut(s) 1019, 1181, 1431, 1592, 1691
DpnI GATC 7 cut(s) 87, 141, 228, 299, 319, 503, 1166
DpnII GATC 7 cut(s) 85, 139, 226, 297, 317, 501, 1164
Eam1104I CTCTTC 3 cut(s) 312, 1302, 1484
EarI CTCTTC 3 cut(s) 312, 1302, 1484
Eco130I CCWWGG 4 cut(s) 274, 635, 1304, 1361
Eco32I GATATC 1 cut(s) 331
Eco47I GGWCC 2 cut(s) 495, 999
Eco57I CTGAAG 1 cut(s) 411
Eco88I CYCGRG 1 cut(s) 79
EcoRI GAATTC 1 cut(s) 881
EcoRII CCWGG 2 cut(s) 795, 1001
EcoRV GATATC 1 cut(s) 331
EcoT14I CCWWGG 4 cut(s) 274, 635, 1304, 1361
EcoT22I ATGCAT 1 cut(s) 209
ErhI CCWWGG 4 cut(s) 274, 635, 1304, 1361
Esp3I CGTCTC 1 cut(s) 1572
FaeI CATG 6 cut(s) 207, 211, 495, 740, 804, 1308
FaqI GGGAC 1 cut(s) 873
FatI CATG 6 cut(s) 203, 207, 491, 736, 800, 1304
FauI CCCGC 1 cut(s) 1383
FblI GTMKAC 1 cut(s) 119
Fnu4HI GCNGC 3 cut(s) 660, 1618, 1621
FokI GGATG 5 cut(s) 390, 831, 1283, 1391, 1591
Fsp4HI GCNGC 3 cut(s) 660, 1618, 1621
FspBI CTAG 9 cut(s) 518, 548, 579, 656, 732, 1262, 1319, 1746, 1763
GluI GCNGC 3 cut(s) 660, 1618, 1621
HapII CCGG 2 cut(s) 686, 960
Hin1II CATG 6 cut(s) 207, 211, 495, 740, 804, 1308
HincII GTYRAC 1 cut(s) 120
HindII GTYRAC 1 cut(s) 120
HinfI GANTC 2 cut(s) 134, 947
HpaII CCGG 2 cut(s) 686, 960
HphI GGTGA 1 cut(s) 1577
Hpy166II GTNNAC 4 cut(s) 120, 283, 1426, 1507
Hpy188I TCNGA 8 cut(s) 93, 139, 144, 317, 1041, 1198, 1434, 1593
Hpy188III TCNNGA 7 cut(s) 81, 470, 579, 951, 1214, 1645, 1738
Hpy8I GTNNAC 4 cut(s) 120, 283, 1426, 1507
Hpy99I CGWCG 4 cut(s) 69, 121, 471, 1452
HpyAV CCTTC 3 cut(s) 1169, 1484, 1642
HpyCH4III ACNGT 3 cut(s) 913, 1613, 1714
HpyCH4IV ACGT 5 cut(s) 116, 466, 513, 1056, 1128
HpyF10VI GCNNNNNNNGC 1 cut(s) 1694
HpyF3I CTNAG 5 cut(s) 1019, 1181, 1431, 1592, 1691
HpySE526I ACGT 5 cut(s) 116, 466, 513, 1056, 1128
Hsp92II CATG 6 cut(s) 207, 211, 495, 740, 804, 1308
Kzo9I GATC 7 cut(s) 85, 139, 226, 297, 317, 501, 1164
LmnI GCTCC 3 cut(s) 551, 746, 1628
Lsp1109I GCAGC 2 cut(s) 646, 1629
LweI GCATC 2 cut(s) 115, 1261
MaeI CTAG 9 cut(s) 518, 548, 579, 656, 732, 1262, 1319, 1746, 1763
MaeII ACGT 5 cut(s) 116, 466, 513, 1056, 1128
MaeIII GTNAC 5 cut(s) 543, 862, 1403, 1483, 1664
MalI GATC 7 cut(s) 87, 141, 228, 299, 319, 503, 1166
MbiI CCGCTC 1 cut(s) 1623
MboI GATC 7 cut(s) 85, 139, 226, 297, 317, 501, 1164
MfeI CAATTG 1 cut(s) 1254
MflI RGATCY 2 cut(s) 85, 226
MlyI GAGTC 1 cut(s) 956
MmeI TCCRAC 2 cut(s) 116, 1577
MnlI CCTC 7 cut(s) 62, 142, 288, 508, 566, 1079, 1440
Mph1103I ATGCAT 1 cut(s) 209
MroXI GAANNNNTTC 5 cut(s) 171, 449, 931, 1550, 1587
MseI TTAA 4 cut(s) 375, 696, 1353, 1557
MslI CAYNNNNRTG 1 cut(s) 686
MspCI CTTAAG 1 cut(s) 1556
MspI CCGG 2 cut(s) 686, 960
MspR9I CCNGG 2 cut(s) 797, 1003
MunI CAATTG 1 cut(s) 1254
Mva1269I GAATGC 1 cut(s) 1473
MvaI CCWGG 2 cut(s) 797, 1003
MwoI GCNNNNNNNGC 1 cut(s) 1694
NcoI CCATGG 1 cut(s) 1304
NdeII GATC 7 cut(s) 85, 139, 226, 297, 317, 501, 1164
NlaIII CATG 6 cut(s) 207, 211, 495, 740, 804, 1308
NlaIV GGNNCC 4 cut(s) 748, 794, 1033, 1742
NmuCI GTSAC 3 cut(s) 862, 1403, 1664
NsiI ATGCAT 1 cut(s) 209
NspI RCATGY 2 cut(s) 207, 804
OliI CACNNNNGTG 1 cut(s) 686
PaeI GCATGC 2 cut(s) 207, 804
PctI GAATGC 1 cut(s) 1473
PdmI GAANNNNTTC 5 cut(s) 171, 449, 931, 1550, 1587
PfeI GAWTC 1 cut(s) 134
PkrI GCNGC 3 cut(s) 661, 1619, 1622
PleI GAGTC 1 cut(s) 955
PpsI GAGTC 1 cut(s) 955
Ppu21I YACGTR 1 cut(s) 1057
Psp6I CCWGG 2 cut(s) 795, 1001
PspGI CCWGG 2 cut(s) 795, 1001
PspN4I GGNNCC 4 cut(s) 748, 794, 1033, 1742
PspPI GGNCC 2 cut(s) 495, 999
PstI CTGCAG 1 cut(s) 817
PsuI RGATCY 2 cut(s) 85, 226
RsaI GTAC 8 cut(s) 242, 433, 722, 741, 758, 1312, 1427, 1677
RsaNI GTAC 8 cut(s) 241, 432, 721, 740, 757, 1311, 1426, 1676
RseI CAYNNNNRTG 1 cut(s) 686
SalI GTCGAC 1 cut(s) 118
SaqAI TTAA 4 cut(s) 375, 696, 1353, 1557
SatI GCNGC 3 cut(s) 660, 1618, 1621
Sau3AI GATC 7 cut(s) 85, 139, 226, 297, 317, 501, 1164
Sau96I GGNCC 2 cut(s) 495, 999
ScaI AGTACT 1 cut(s) 433
SchI GAGTC 1 cut(s) 956
ScrFI CCNGG 2 cut(s) 797, 1003
SfaNI GCATC 2 cut(s) 115, 1261
SfcI CTRYAG 3 cut(s) 813, 909, 1713
SinI GGWCC 2 cut(s) 495, 999
SmiMI CAYNNNNRTG 1 cut(s) 686
SmlI CTYRAG 2 cut(s) 1412, 1556
SmoI CTYRAG 2 cut(s) 1412, 1556
SphI GCATGC 2 cut(s) 207, 804
SsiI CCGC 5 cut(s) 381, 1089, 1159, 1390, 1621
SspI AATATT 3 cut(s) 172, 850, 930
SspMI CTAG 9 cut(s) 518, 548, 579, 656, 732, 1262, 1319, 1746, 1763
StyD4I CCNGG 2 cut(s) 795, 1001
StyI CCWWGG 4 cut(s) 274, 635, 1304, 1361
TaaI ACNGT 3 cut(s) 913, 1613, 1714
TaiI ACGT 5 cut(s) 119, 469, 516, 1059, 1131
TatI WGTACW 4 cut(s) 240, 431, 720, 739
TauI GCSGC 1 cut(s) 1623
TfiI GAWTC 1 cut(s) 134
Tru1I TTAA 4 cut(s) 375, 696, 1353, 1557
Tru9I TTAA 4 cut(s) 375, 696, 1353, 1557
TscAI CASTG 5 cut(s) 817, 1425, 1522, 1618, 1699
TseFI GTSAC 3 cut(s) 862, 1403, 1664
TseI GCWGC 2 cut(s) 659, 1617
Tsp45I GTSAC 3 cut(s) 862, 1403, 1664
TspDTI ATGAA 4 cut(s) 177, 660, 872, 1559
TspGWI ACGGA 3 cut(s) 161, 1199, 1629
TspRI CASTG 5 cut(s) 817, 1425, 1522, 1618, 1699
Vha464I CTTAAG 1 cut(s) 1556
VpaK11BI GGWCC 2 cut(s) 495, 999
XapI RAATTY 8 cut(s) 103, 184, 360, 607, 648, 668, 881, 904
XbaI TCTAGA 1 cut(s) 578
XceI RCATGY 2 cut(s) 207, 804
XmiI GTMKAC 1 cut(s) 119
XmnI GAANNNNTTC 5 cut(s) 171, 449, 931, 1550, 1587
XspI CTAG 9 cut(s) 518, 548, 579, 656, 732, 1262, 1319, 1746, 1763
ZrmI AGTACT 1 cut(s) 433
Zsp2I ATGCAT 1 cut(s) 209
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.