Rorug02G0166600

Cyclic nucleotide-gated ion channel 1-like

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Forward (+)
14907542 .. 14912501
4960 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0166600.1

Sequence Viewer

Length: 2661 bp
ATGGAAGACCTTGTTGCAGGGGGTGCTATGGGTGTACCATTTAATGCCCTCTATGACGTCATTAAGGAAGTGGTGGTCAAGACTAAGATGTTTAAACCTCTCCTCGAAGATCTTGACTCAACGATAGATTCTTTGAAACCACTTATCGATGAGATGAAAAAGTGCAATAAGGTGTTGGATCATCCAGAGAATGAACTTAAAGAATTTGAAGTACAAATGCAGAAGGGTGCGGTGCTCATTCCCAAGTGCTCTAAGGTTAGATGGTGGAATATTTGCAAAAAGTATAAATACACCAACCAACTTCTTGAATTAAAAAGCTCTCTTCGGAGTTTGTATGATATATTGGAAGTGCAAGTAGCTAGAGATATGAAGATTACGCTGGTTGAAGTAAGAAATATAGGGACGGCTGTCCAGCATACTGATACAACAATAATGGAAGTTGCAGAGAATGTGCAACAGAACTTGGCTGCGACAAATGATATAGAGATGGTGGTCCATCAGACTGATGTAACAACCTTGCAAGTGGCAAGGCATGTGAGAAATATAGATACTGTGGTTCAGCGTACTAATGAAACAGGCTTGCAAGTAGCAAGGAATGTGAGAAACATAGAGACAGTGGTACAGCGGATTGATGACAATGTTGTGTTACTGGTACACAATCAGAAAATAGACCAGGTTCGAGGTTGGGGTGCAGTACCTGTAGGTGCACCATTTACAGTTGGAGTGGATATGCCTTTGAGGGAATTGAAGATTAAGCTTCTTAAGGATGAGAAAGTAACAATGCTTGTGCTCACTGCTCCAGGAGGATGTGGGAAGACCACTTTAGCAATAAAGTTTTGTGAAGATTACGAAGTCAAAGACAAATTTAAGGACAATATCTTCTTTGTCACTGTCTCAAAGAAGTCCGATGACCTTGTTGTACAAGAGCTTTATCACTGCTGGGGTTCTAAAATTCCTACTTTGCACAGTGAAGTTGATGTGGTTAAGTGGCTACAGCAATTCCGGATTGGAGTAGGAAAGAATCCTGTACTTTTTGTCTTGGATGATGTTTGGTCTGGATCGGAATCCCTTCTTCAGAAGTTTTATGATTTCAAATTGCCAAATTCCAAGATTTTGGTGACATCAAGATTTAGATTTCCAAGATTTGGTACTCAACATAGTCTAGAACCGTTGAATATTGAAGATGCAGCAACTCTTTTCAAACATTCAGCATCCCTGGGAGATCTAAGCTGTAATATTCCTGAAGATATTATGAGAAAGATAATAGAGCATTTCAAAGAATCTCCACTTGCCATTACAGTGGTTGGAAGATCTCTTTGTGGAAAACCTGTAGAGTCCTGGCTGAAAAGAGAATCTACACTAAAAGGTGCTTCTATTCGTAATTCTGAGGATACATTGCTAGATGGCCTTCAGAGTTGTTTAGACGCCTTGAATGAAGAAGATCATATCTTGAAGGAATGCTTCTTAGACCTGGGTTCATTTCCTGAAGACCAAAGGATCTCTGCTGCTGCTCTCATTGATATGTGGGCAGAACTATATAAGCTAGAAGATTTTGTGTCCATTGCGAACCTCCACGAGCTTGCTGCTCGAAGTCTGGCTAATCTTCTAATTACACGGAAGGAGACGACGGAGGCAGATGGGTACTACAGTGAACACTTCATTACTCAGCATGATTTGCTTAGACAGTTTGCTATCTACCAGCCAAAGCCAGAAGCAAATAATAAAAGACGGATCATAGACAAATGGGGAGACAATCTACCTGAGTGCTTGACAGGACAGAAGCATCAACCCATCAAGGCCCGCCTATTATCTATCTCCTCCGATGGAGTGTTCTCGATGAATTTGGACAACATTGAACTGGCAGAGGTTGAAGTTCTAGTTTTGAATTTTGACACACAGAACTATGCTTTACCCGAATTTGTGGTCAAGATGGACAAACTGAAGGTTTTAATAGTCAGAAATCATGGTTTTTTACCTGCTGAATTGTGCAACATTCAACTGCTGGGTTCTTTATCAAATCTGAAGAGAATCAGATTAGAGCGCATTTCAATTTCTTCCATAACCAAGAATCTCATACAGTTGAAGAGTGTAAAGAAGATATCTCTATTCATGTGCAACATTGGTCAAGCTTTCAGCAATTGTTCCCTTCAAATATCAGATGCATTGCCATATTTAGAGGAAATGAACATTGACTACTGCAATGATTTGGTGGAGTTGCCTGCCGCACTGTGTGCTCTGGTTAACCTAAAGAAGCTCAGTATAACCAACTCGCATAAGCTATCTGCCTTGCCTGAAGAGATTGGAAAGCTGGTCAATTTAGAAGTATTGAGGCTGAGGTCTTGTACAGACTTGGCAAAGTTGCCAGACTCGACTAGGAACCTAGAGAAGTTAAACTTTCTAGACATAGCTGATTGCTTCAGCATTCGGGAATTGCCTGAAGACTTTGGTGGAATGAGCAGTTTAAAAAAGATCAACATGAGAATGTGTTCAAGATTGCAAGAGCTGCCTTCATCAGTTGTGGATCTTGAGCAGTTGCAGGAAGTGGTATGTGATGAAGACACAGGTGATTTATGGGAACCCTTCTTACCCCATCTCAAAAACCTCCATATAAAGCCGGTCAAAGAAAATGTCAACCTGAATTGGCTACATAAGCTTCAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

886

Amino Acids

100.5

Weight (kDa)

5.79

Isoelectric Point (pI)

43.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RPW8 PF05659 3 - 137 8.4e-33 Arabidopsis broad-spectrum mildew resistance protein RPW8
NB-ARC PF00931 245 - 402 3.5e-11 NB-ARC domain
LRR_14 PF23598 743 - 825 2.4e-11 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000119)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g10570 FvH4_4g36390 FvH4_7g31840 FvH4_7g31840 FvH4_7g31850 FvH4_7g31850 FvH4_7g31861 FvH4_7g31861 FvH4_7g31950
malus_domestica MD01G1054600.v1.1 MD01G1221100.v1.1 MD01G1221400.v1.1 MD01G1221600.v1.1 MD01G1221800.v1.1 MD01G1222000.v1.1 MD01G1222100.v1.1 MD07G1140800.v1.1 MD07G1291200.v1.1 MD07G1291400.v1.1 MD07G1291500.v1.1 MD07G1291700.v1.1 MD07G1292500.v1.1 MD07G1292700.v1.1 MD07G1292800.v1.1 MD07G1292900.v1.1 MD08G1241600.v1.1 MD11G1083800.v1.1 MD15G1431600.v1.1
prunus_persica Prupe.1G017800_v2.0.a1 Prupe.1G017800_v2.0.a1 Prupe.1G162800_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312700_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G143000_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1
pyrus_communis pycom01g23050 pycom01g23070 pycom01g23090 pycom01g23100 pycom01g23110 pycom01g23120 pycom01g23170 pycom07g26410 pycom07g26440 pycom07g26470 pycom07g26480 pycom07g26490 pycom07g26500 pycom07g26510 pycom07g26530 pycom07g26540 pycom07g26570 pycom07g26580 pycom07g26590 pycom08g20940
rosa_chinensis RchiOBHm_Chr1g0324571 RchiOBHm_Chr1g0336181 RchiOBHm_Chr1g0381061 RchiOBHm_Chr1g0381091 RchiOBHm_Chr1g0381121 RchiOBHm_Chr1g0381131 RchiOBHm_Chr1g0381141 RchiOBHm_Chr1g0381161 RchiOBHm_Chr1g0381211 RchiOBHm_Chr2g0110361 RchiOBHm_Chr2g0120231 RchiOBHm_Chr3g0486281 RchiOBHm_Chr3g0486311 RchiOBHm_Chr3g0486401 RchiOBHm_Chr4g0409511 RchiOBHm_Chr4g0409521 RchiOBHm_Chr5g0017271 RchiOBHm_Chr5g0048781 RchiOBHm_Chr5g0048811
rosa_laevigata RLG00000002401 RLG00000008559 RLG00000017798 RLG00000017799 RLG00000023082 RLG00000023088 RLG00000026230 RLG00000026238 RLG00000026240 RLG00000026241 RLG00000026242 RLG00000026243 RLG00000026244 RLG00000026246 RLG00000026247 RLG00000026248 RLG00000029876 RLG00000030189 RLG00000034579
rosa_multiflora Rmu_co8101374.1_g000001 Rmu_co8309149.1_g000001 Rmu_co8450063.1_g000001 Rmu_sc0000441.1_g000094 Rmu_sc0000479.1_g000005 Rmu_sc0000647.1_g000006 Rmu_sc0001393.1_g000031 Rmu_sc0001423.1_g000037 Rmu_sc0001616.1_g000015 Rmu_sc0001857.1_g000011 Rmu_sc0002183.1_g000013 Rmu_sc0002183.1_g000028 Rmu_sc0002183.1_g000030 Rmu_sc0002688.1_g000003 Rmu_sc0002688.1_g000020 Rmu_sc0003801.1_g000003 Rmu_sc0003801.1_g000004 Rmu_sc0004125.1_g000006 Rmu_sc0004494.1_g000005 Rmu_sc0004494.1_g000006 Rmu_sc0004494.1_g000008 Rmu_sc0004494.1_g000009 Rmu_sc0005842.1_g000004 Rmu_sc0006872.1_g000001 Rmu_sc0006872.1_g000005 Rmu_sc0006872.1_g000009 Rmu_sc0006872.1_g000010 Rmu_sc0008053.1_g000026
rosa_roxburghii Rroxscaffold_159G00432960 Rroxscaffold_1G00033060 Rroxscaffold_2G00123150 Rroxscaffold_2G00123170 Rroxscaffold_2G00133500 Rroxscaffold_2G00133550 Rroxscaffold_4G00278650 Rroxscaffold_4G00278750 Rroxscaffold_4G00278790 Rroxscaffold_4G00278800 Rroxscaffold_4G00278810 Rroxscaffold_4G00325390 Rroxscaffold_5G00354010 Rroxscaffold_6G00395890 Rroxscaffold_6G00395900 Rroxscaffold_6G00395920
rosa_rugosa Rorug01G0046900.1 Rorug01G0427000 Rorug01G0427100 Rorug01G0427200 Rorug01G0427300 Rorug01G0427400 Rorug01G0427500 Rorug01G0427500 Rorug01G0427600 Rorug01G0427600 Rorug01G0427700 Rorug01G0427700 Rorug01G0427800 Rorug01G0428700 Rorug02G0166400 Rorug02G0166500 Rorug02G0166500 Rorug02G0166600 Rorug02G0166600 Rorug02G0166700 Rorug02G0167300 Rorug02G0167300 Rorug02G0167300 Rorug03G0224600 Rorug03G0224600 Rorug04G0094400 Rorug05G0241100 Rorug05G0241200
rosa_samantha Rh1BG407700 Rh1BG407900 Rh1BG409000 Rh1CG064700 Rh1CG420900 Rh1CG421000 Rh1CG421200 Rh1CG421300 Rh1CG421800 Rh1CG421900 Rh1CG422000 Rh1CG422200 Rh1CG422300 Rh1CG423600 Rh1DG437600 Rh1DG438900 Rh1DG439000 Rh1DG440300 Rh2AG219100 Rh2CG220700 Rh2DG225300 Rh3AG274400 Rh3AG274600 Rh3CG308900 Rh3DG305800 Rh4AG156400 Rh5AG129000 Rh5AG320900 Rh5CG139600
rosa_wichuraiana Rw1G005300 Rw1G039280 Rw1G039300 Rw1G039310 Rw1G039320 Rw1G039330 Rw1G039340 Rw1G039360 Rw1G039390 Rw2G016910 Rw2G022800 Rw3G024330 Rw3G024340 Rw3G024350 Rw3G024400 Rw4G012810 Rw5G030120 Rw5G030280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 60
Acc36I ACCTGC 1 cut(s) 1984
AccB7I CCANNNNNTGG 1 cut(s) 1145
AccIII TCCGGA 1 cut(s) 1002
AciI CCGC 4 cut(s) 230, 625, 1801, 2223
AclWI GGATC 5 cut(s) 186, 1066, 1505, 1739, 2529
AcsI RAATTY 7 cut(s) 203, 863, 951, 1102, 1840, 1885, 1916
AcuI CTGAAG 9 cut(s) 1058, 1263, 1394, 1506, 1961, 2042, 2313, 2401, 2457
AcyI GRCGYC 2 cut(s) 57, 1425
AdeI CACNNNGTG 1 cut(s) 2231
AfiI CCNNNNNNNGG 1 cut(s) 1145
AflII CTTAAG 1 cut(s) 761
AjnI CCWGG 5 cut(s) 672, 799, 1215, 1337, 1470
Alw21I GWGCWC 5 cut(s) 237, 251, 709, 792, 2236
Alw26I GTCTC 4 cut(s) 605, 898, 1616, 1743
Alw44I GTGCAC 1 cut(s) 705
AlwI GGATC 5 cut(s) 186, 1066, 1505, 1739, 2529
AlwNI CAGNNNCTG 1 cut(s) 698
Aor13HI TCCGGA 1 cut(s) 1002
AoxI GGCC 2 cut(s) 1405, 1797
ApaLI GTGCAC 1 cut(s) 705
ApeKI GCWGC 6 cut(s) 467, 1187, 1505, 1508, 1583, 2503
ApoI RAATTY 7 cut(s) 203, 863, 951, 1102, 1840, 1885, 1916
ArsI GACNNNNNNTTYG 4 cut(s) 1908, 1940, 2613, 2645
Asp700I GAANNNNTTC 2 cut(s) 1068, 2485
AspLEI GCGC 1 cut(s) 2043
AspS9I GGNCC 2 cut(s) 493, 1798
AsuHPI GGTGA 2 cut(s) 1129, 2576
AvaII GGWCC 1 cut(s) 493
BaeGI GKGCMC 1 cut(s) 709
BaeI ACNNNNGTAYC 4 cut(s) 540, 573, 1633, 1666
BauI CACGAG 1 cut(s) 1574
BbsI GAAGAC 5 cut(s) 12, 821, 1494, 2445, 2562
Bbv12I GWGCWC 5 cut(s) 237, 251, 709, 792, 2236
BbvCI CCTCAGC 1 cut(s) 2333
BbvI GCAGC 6 cut(s) 454, 1199, 1492, 1495, 1570, 2490
BccI CCATC 9 cut(s) 255, 481, 504, 1397, 1631, 1799, 1817, 1924, 2598
BceAI ACGGC 1 cut(s) 420
BcgI CGANNNNNNTGC 2 cut(s) 1565, 1599
BciT130I CCWGG 5 cut(s) 674, 801, 1217, 1339, 1472
BciVI GTATCC 1 cut(s) 1384
BcoDI GTCTC 4 cut(s) 605, 898, 1616, 1743
BfaI CTAG 8 cut(s) 360, 1163, 1400, 1544, 1877, 2373, 2381, 2399
BfmI CTRYAG 4 cut(s) 699, 992, 1329, 1645
BfrI CTTAAG 1 cut(s) 761
BfuAI ACCTGC 1 cut(s) 1984
BfuI GTATCC 1 cut(s) 1384
BglII AGATCT 3 cut(s) 109, 1222, 1310
BisI GCNGC 7 cut(s) 468, 1188, 1506, 1509, 1584, 2223, 2504
BlsI GCNGC 7 cut(s) 469, 1189, 1507, 1510, 1585, 2224, 2505
Bme1390I CCNGG 5 cut(s) 674, 801, 1217, 1339, 1472
Bme18I GGWCC 1 cut(s) 493
BmgT120I GGNCC 2 cut(s) 493, 1798
BmiI GGNNCC 2 cut(s) 2378, 2577
BmrFI CCNGG 5 cut(s) 674, 801, 1217, 1339, 1472
BmsI GCATC 4 cut(s) 1174, 1220, 1792, 2149
BoxI GACNNNNGTC 1 cut(s) 407
BpiI GAAGAC 5 cut(s) 12, 821, 1494, 2445, 2562
BpmI CTGGAG 1 cut(s) 783
Bpu10I CCTNAGC 1 cut(s) 2333
BpuEI CTTGAG 1 cut(s) 2546
Bsa29I ATCGAT 1 cut(s) 147
BsaBI GATNNNNATC 1 cut(s) 1063
BsaHI GRCGYC 2 cut(s) 57, 1425
BsaJI CCNNGG 3 cut(s) 1215, 1216, 1471
BsaWI WCCGGW 1 cut(s) 1002
Bsc4I CCNNNNNNNGG 1 cut(s) 1145
Bse118I RCCGGY 1 cut(s) 2614
Bse1I ACTGG 2 cut(s) 654, 1863
Bse3DI GCAATG 4 cut(s) 1394, 1560, 2162, 2206
Bse8I GATNNNNATC 1 cut(s) 1063
BseAI TCCGGA 1 cut(s) 1002
BseBI CCWGG 5 cut(s) 674, 801, 1217, 1339, 1472
BseCI ATCGAT 1 cut(s) 147
BseDI CCNNGG 3 cut(s) 1215, 1216, 1471
BseGI GGATG 5 cut(s) 181, 772, 812, 1048, 1211
BseJI GATNNNNATC 1 cut(s) 1063
BseLI CCNNNNNNNGG 1 cut(s) 1145
BseMI GCAATG 4 cut(s) 1394, 1560, 2162, 2206
BseMII CTCAG 5 cut(s) 1377, 1679, 1752, 2269, 2324
BseNI ACTGG 2 cut(s) 654, 1863
BseRI GAGGAG 2 cut(s) 92, 1807
BseSI GKGCMC 1 cut(s) 709
BseXI GCAGC 6 cut(s) 454, 1199, 1492, 1495, 1570, 2490
BseYI CCCAGC 2 cut(s) 939, 2002
BsgI GTGCAG 1 cut(s) 711
BshFI GGCC 2 cut(s) 1407, 1799
BshVI ATCGAT 1 cut(s) 147
BsiHKAI GWGCWC 5 cut(s) 237, 251, 709, 792, 2236
BsiSI CCGG 2 cut(s) 1003, 2615
BslFI GGGAC 1 cut(s) 415
BslI CCNNNNNNNGG 1 cut(s) 1145
BsmAI GTCTC 4 cut(s) 605, 898, 1616, 1743
BsmBI CGTCTC 1 cut(s) 1616
BsmFI GGGAC 1 cut(s) 415
BsmI GAATGC 2 cut(s) 1463, 2421
BsnI GGCC 2 cut(s) 1407, 1799
Bsp1286I GDGCHC 5 cut(s) 237, 251, 709, 792, 2236
Bsp13I TCCGGA 1 cut(s) 1002
Bsp1407I TGTACA 2 cut(s) 919, 2342
BspACI CCGC 4 cut(s) 230, 625, 1801, 2223
BspANI GGCC 2 cut(s) 1407, 1799
BspCNI CTCAG 5 cut(s) 1378, 1678, 1753, 2268, 2325
BspDI ATCGAT 1 cut(s) 147
BspEI TCCGGA 1 cut(s) 1002
BspLI GGNNCC 2 cut(s) 2378, 2577
BspMI ACCTGC 1 cut(s) 1984
BspPI GGATC 5 cut(s) 186, 1066, 1505, 1739, 2529
BspTI CTTAAG 1 cut(s) 761
BsrDI GCAATG 4 cut(s) 1394, 1560, 2162, 2206
BsrFI RCCGGY 1 cut(s) 2614
BsrGI TGTACA 2 cut(s) 919, 2342
BsrI ACTGG 2 cut(s) 654, 1863
BssAI RCCGGY 1 cut(s) 2614
BssECI CCNNGG 3 cut(s) 1215, 1216, 1471
BssNI GRCGYC 2 cut(s) 57, 1425
BssSI CACGAG 1 cut(s) 1574
Bst2BI CACGAG 1 cut(s) 1574
Bst2UI CCWGG 5 cut(s) 674, 801, 1217, 1339, 1472
Bst6I CTCTTC 4 cut(s) 327, 2018, 2078, 2289
BstACI GRCGYC 2 cut(s) 57, 1425
BstAFI CTTAAG 1 cut(s) 761
BstAPI GCANNNNNTGC 4 cut(s) 23, 1675, 2231, 2503
BstAUI TGTACA 2 cut(s) 919, 2342
BstC8I GCNNGC 4 cut(s) 581, 1581, 1801, 2220
BstF5I GGATG 5 cut(s) 181, 772, 812, 1048, 1211
BstHHI GCGC 1 cut(s) 2043
BstMAI GTCTC 4 cut(s) 605, 898, 1616, 1743
BstMWI GCNNNNNNNGC 5 cut(s) 23, 1675, 2231, 2503, 2650
BstNI CCWGG 5 cut(s) 674, 801, 1217, 1339, 1472
BstNSI RCATGY 1 cut(s) 536
BstPAI GACNNNNGTC 1 cut(s) 407
BstSCI CCNGG 5 cut(s) 672, 799, 1215, 1337, 1470
BstSFI CTRYAG 4 cut(s) 699, 992, 1329, 1645
BstSLI GKGCMC 1 cut(s) 709
BstV1I GCAGC 6 cut(s) 454, 1199, 1492, 1495, 1570, 2490
BstV2I GAAGAC 5 cut(s) 12, 821, 1494, 2445, 2562
BstX2I RGATCY 5 cut(s) 109, 1222, 1310, 1497, 2521
BstXI CCANNNNNNTGG 2 cut(s) 1114, 1300
BstYI RGATCY 5 cut(s) 109, 1222, 1310, 1497, 2521
Bsu15I ATCGAT 1 cut(s) 147
BsuI GTATCC 1 cut(s) 1384
BsuRI GGCC 2 cut(s) 1407, 1799
BsuTUI ATCGAT 1 cut(s) 147
BtsCI GGATG 5 cut(s) 181, 772, 812, 1048, 1211
BtsI GCAGTG 2 cut(s) 792, 934
BtsIMutI CAGTG 8 cut(s) 621, 792, 888, 934, 973, 1305, 1654, 2225
BveI ACCTGC 1 cut(s) 1984
Cac8I GCNNGC 4 cut(s) 581, 1581, 1801, 2220
CaiI CAGNNNCTG 1 cut(s) 698
CfoI GCGC 1 cut(s) 2043
Cfr10I RCCGGY 1 cut(s) 2614
Cfr13I GGNCC 2 cut(s) 493, 1798
ClaI ATCGAT 1 cut(s) 147
CseI GACGC 1 cut(s) 1433
CsiI ACCWGGT 1 cut(s) 672
CviAII CATG 5 cut(s) 533, 1670, 1964, 2110, 2476
DraI TTTAAA 2 cut(s) 94, 2463
DraIII CACNNNGTG 1 cut(s) 2231
Eam1104I CTCTTC 4 cut(s) 327, 2018, 2078, 2289
EarI CTCTTC 4 cut(s) 327, 2018, 2078, 2289
Eco32I GATATC 1 cut(s) 2100
Eco47I GGWCC 1 cut(s) 493
Eco57I CTGAAG 9 cut(s) 1058, 1263, 1394, 1506, 1961, 2042, 2313, 2401, 2457
EcoRII CCWGG 5 cut(s) 672, 799, 1215, 1337, 1470
EcoRV GATATC 1 cut(s) 2100
EcoT22I ATGCAT 1 cut(s) 2164
Esp3I CGTCTC 1 cut(s) 1616
FaeI CATG 5 cut(s) 536, 1673, 1967, 2113, 2479
FalI AAGNNNNNCTT 4 cut(s) 1445, 1477, 2378, 2410
FaqI GGGAC 1 cut(s) 415
FatI CATG 5 cut(s) 532, 1669, 1963, 2109, 2475
FauI CCCGC 1 cut(s) 1808
Fnu4HI GCNGC 7 cut(s) 468, 1188, 1506, 1509, 1584, 2223, 2504
FokI GGATG 5 cut(s) 168, 779, 819, 1055, 1198
Fsp4HI GCNGC 7 cut(s) 468, 1188, 1506, 1509, 1584, 2223, 2504
FspBI CTAG 8 cut(s) 360, 1163, 1400, 1544, 1877, 2373, 2381, 2399
GlaI GCGC 1 cut(s) 2042
GluI GCNGC 7 cut(s) 468, 1188, 1506, 1509, 1584, 2223, 2504
GsaI CCCAGC 2 cut(s) 943, 2006
GsuI CTGGAG 1 cut(s) 783
HaeIII GGCC 2 cut(s) 1407, 1799
HapII CCGG 2 cut(s) 1003, 2615
HgaI GACGC 1 cut(s) 1433
HhaI GCGC 1 cut(s) 2043
Hin1I GRCGYC 2 cut(s) 57, 1425
Hin1II CATG 5 cut(s) 536, 1673, 1967, 2113, 2479
Hin6I GCGC 1 cut(s) 2041
HinP1I GCGC 1 cut(s) 2041
HincII GTYRAC 2 cut(s) 2242, 2632
HindII GTYRAC 2 cut(s) 2242, 2632
HindIII AAGCTT 3 cut(s) 755, 2127, 2651
HpaI GTTAAC 1 cut(s) 2242
HpaII CCGG 2 cut(s) 1003, 2615
HphI GGTGA 2 cut(s) 1129, 2576
Hpy166II GTNNAC 6 cut(s) 35, 655, 707, 1652, 2242, 2632
Hpy8I GTNNAC 6 cut(s) 35, 655, 707, 1652, 2242, 2632
Hpy99I CGWCG 1 cut(s) 1630
HpyAV CCTTC 9 cut(s) 217, 1079, 1418, 1447, 1612, 1936, 2156, 2517, 2590
HpyCH4IV ACGT 1 cut(s) 57
HpyF10VI GCNNNNNNNGC 5 cut(s) 23, 1675, 2231, 2503, 2650
HpySE526I ACGT 1 cut(s) 57
Hsp92I GRCGYC 2 cut(s) 57, 1425
Hsp92II CATG 5 cut(s) 536, 1673, 1967, 2113, 2479
HspAI GCGC 1 cut(s) 2041
Kpn2I TCCGGA 1 cut(s) 1002
KspAI GTTAAC 1 cut(s) 2242
LmnI GCTCC 1 cut(s) 802
Lsp1109I GCAGC 6 cut(s) 454, 1199, 1492, 1495, 1570, 2490
LweI GCATC 4 cut(s) 1174, 1220, 1792, 2149
MabI ACCWGGT 1 cut(s) 672
MaeI CTAG 8 cut(s) 360, 1163, 1400, 1544, 1877, 2373, 2381, 2399
MaeII ACGT 1 cut(s) 57
MaeIII GTNAC 5 cut(s) 508, 645, 775, 886, 1117
MfeI CAATTG 1 cut(s) 2137
MflI RGATCY 5 cut(s) 109, 1222, 1310, 1497, 2521
MhlI GDGCHC 5 cut(s) 237, 251, 709, 792, 2236
MlyI GAGTC 3 cut(s) 110, 1343, 2360
MmeI TCCRAC 3 cut(s) 156, 700, 1285
Mph1103I ATGCAT 1 cut(s) 2164
MroI TCCGGA 1 cut(s) 1002
MroXI GAANNNNTTC 2 cut(s) 1068, 2485
MslI CAYNNNNRTG 3 cut(s) 1298, 1520, 2480
MspA1I CMGCKG 1 cut(s) 625
MspCI CTTAAG 1 cut(s) 761
MspI CCGG 2 cut(s) 1003, 2615
MspR9I CCNGG 5 cut(s) 674, 801, 1217, 1339, 1472
MssI GTTTAAAC 1 cut(s) 94
MunI CAATTG 1 cut(s) 2137
Mva1269I GAATGC 2 cut(s) 1463, 2421
MvaI CCWGG 5 cut(s) 674, 801, 1217, 1339, 1472
MwoI GCNNNNNNNGC 5 cut(s) 23, 1675, 2231, 2503, 2650
NlaIII CATG 5 cut(s) 536, 1673, 1967, 2113, 2479
NlaIV GGNNCC 2 cut(s) 2378, 2577
NmuCI GTSAC 2 cut(s) 886, 1117
NsiI ATGCAT 1 cut(s) 2164
NspI RCATGY 1 cut(s) 536
PasI CCCWGGG 1 cut(s) 1216
PctI GAATGC 2 cut(s) 1463, 2421
PdmI GAANNNNTTC 2 cut(s) 1068, 2485
PfeI GAWTC 7 cut(s) 128, 1021, 1064, 1280, 1352, 2028, 2068
PflMI CCANNNNNTGG 1 cut(s) 1145
PfoI TCCNGGA 1 cut(s) 799
PkrI GCNGC 7 cut(s) 469, 1189, 1507, 1510, 1585, 2224, 2505
PleI GAGTC 3 cut(s) 110, 1342, 2360
PmeI GTTTAAAC 1 cut(s) 94
PpsI GAGTC 3 cut(s) 110, 1342, 2360
PshAI GACNNNNGTC 1 cut(s) 407
Psp6I CCWGG 5 cut(s) 672, 799, 1215, 1337, 1470
PspFI CCCAGC 2 cut(s) 939, 2002
PspGI CCWGG 5 cut(s) 672, 799, 1215, 1337, 1470
PspN4I GGNNCC 2 cut(s) 2378, 2577
PspPI GGNCC 2 cut(s) 493, 1798
PsrI GAACNNNNNNTAC 4 cut(s) 2177, 2209, 2568, 2600
PstNI CAGNNNCTG 1 cut(s) 698
PsuI RGATCY 5 cut(s) 109, 1222, 1310, 1497, 2521
RseI CAYNNNNRTG 3 cut(s) 1298, 1520, 2480
SatI GCNGC 7 cut(s) 468, 1188, 1506, 1509, 1584, 2223, 2504
Sau96I GGNCC 2 cut(s) 493, 1798
SchI GAGTC 3 cut(s) 110, 1343, 2360
ScrFI CCNGG 5 cut(s) 674, 801, 1217, 1339, 1472
SduI GDGCHC 5 cut(s) 237, 251, 709, 792, 2236
SexAI ACCWGGT 1 cut(s) 672
SfaNI GCATC 4 cut(s) 1174, 1220, 1792, 2149
SfcI CTRYAG 4 cut(s) 699, 992, 1329, 1645
SinI GGWCC 1 cut(s) 493
SmiMI CAYNNNNRTG 3 cut(s) 1298, 1520, 2480
SmlI CTYRAG 2 cut(s) 761, 2525
SmoI CTYRAG 2 cut(s) 761, 2525
SsiI CCGC 4 cut(s) 230, 625, 1801, 2223
SspI AATATT 3 cut(s) 271, 1177, 1237
SspMI CTAG 8 cut(s) 360, 1163, 1400, 1544, 1877, 2373, 2381, 2399
StyD4I CCNGG 5 cut(s) 672, 799, 1215, 1337, 1470
TaiI ACGT 1 cut(s) 60
TaqI TCGA 6 cut(s) 105, 147, 679, 1588, 1835, 2369
TatI WGTACW 4 cut(s) 211, 919, 1027, 2342
TauI GCSGC 1 cut(s) 2225
TfiI GAWTC 7 cut(s) 128, 1021, 1064, 1280, 1352, 2028, 2068
TscAI CASTG 8 cut(s) 621, 799, 895, 941, 973, 1305, 1654, 2232
TseFI GTSAC 2 cut(s) 886, 1117
TseI GCWGC 6 cut(s) 467, 1187, 1505, 1508, 1583, 2503
Tsp45I GTSAC 2 cut(s) 886, 1117
TspGWI ACGGA 3 cut(s) 1630, 1643, 1744
TspRI CASTG 8 cut(s) 621, 799, 895, 941, 973, 1305, 1654, 2232
Van91I CCANNNNNTGG 1 cut(s) 1145
Vha464I CTTAAG 1 cut(s) 761
VneI GTGCAC 1 cut(s) 705
VpaK11BI GGWCC 1 cut(s) 493
XapI RAATTY 7 cut(s) 203, 863, 951, 1102, 1840, 1885, 1916
XbaI TCTAGA 2 cut(s) 1162, 2398
XceI RCATGY 1 cut(s) 536
XmnI GAANNNNTTC 2 cut(s) 1068, 2485
XspI CTAG 8 cut(s) 360, 1163, 1400, 1544, 1877, 2373, 2381, 2399
ZraI GACGTC 1 cut(s) 58
Zsp2I ATGCAT 1 cut(s) 2164
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.