RLG00000023088

Cyclic nucleotide-gated ion channel 1-like

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr5
Physical Location & Seq
Forward (+)
17943398 .. 17947246
3849 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000023088

Sequence Viewer

Length: 1815 bp
ATGTCTAACAGGCTGGTACCCAATGATGACCCTATGATGAGCAACACATGGGGAAGCAAGTACAATGCCGACAATGTTGAGTCACAACCGCGAGATCCCCTGTGGAGAGATCCAGATGCAGTTTCAACAAAACAAAAATTGGGAGAAACACTTATTTCAGTTTCATTCTGGAATAAGATGTTCGTAATTGCATGTGTCATCGCTGTCTCATTAGACCCGTTGTTCTTCTACATTCCAGTCATCAATGAAGAACGAAAGTGCCTTGCAGTAAACATAGAGTTGATGACTATAGCTCTCACTTTGCGATCGCTCACTGATGTCACTTTCGTAGTGAGTATCATATATCATGTTTGCAAAGCCATCAACGATGCGCACAAAGAACACAGACAAAAAAAGTCTGATGAAGTGGCACCGGATTGGGAATTTTCGAAGGTATCAGCAGCGGAGATAATTCCATTTGCTAAATTAGTTGCTGGGAAGCTAGCATGGCGCTCTACGCTAACCAGCATTTTAGCTGTTTTTCCCATGCCACAACTGCTTCTAATATTTGTCTTCTTCGAAATGAGAGGCCATGGACACTTGCGGCATAGAAAGATTCTGAATTTCTTTGTTCTAGCTCAATATCTGCCGAGGATTTATCGAATTTATCTATCATCTCAGAAACTCACACAAACTACTGGAATATGGACTAAAGCTCTGTTTAACTTTTTTCTATATATCCTTGCAAGTCATGTCCTTGGAGCTTTTTGGTACTTTTTCTCTATTCAACGAGAAACTTCTTGTTGGCGTCGAGCGTGTGTAAAGAATAGTACAGTTGAAGGATGTAAGAGTCCCTTATACTGCGAGGGTCACAATAGTACTGCAAGAAATCCCGCACTCCTTAATCAATTTTGCTCTATAAATGCTGAAGAGAATGCTACGGCCGCTTTTGATTTTGGAATATTTCTGCATTCCCTCAAAAATAATATCACACGGGATATACCTTTCGGAACAAAGTTATCTTACTCTTTTTGGTGGGGATTACATGTGTTCAACTTGAATACACACATCATGATTTCCTTCATGGTGTTTTCATATACATTTATGTCCATGGAAGCTGAAAGATGGGAGGATATAAGACACAAGATACAATTGAAAGAGAAAGATTTAACAGGATGGATGGACAGAAATAAGGTCCCAGAGAATTTGAAGAAAGAAATTAAGAAGAAGATTAAGAAAAAACTGGAAGAGAACAAAGATACTGATCATGAGATTCTTTTCTTTAATATTCCGATGAGGTGTCTTAGGCATTTCCTCGGCAAGAAACTGCTAGAGAAAGTACCGAAGCTTGCAAGGATGGATGATGGAGTACTGAAAATGATGTGTAACCGTCTAAAGCCAGTGAAGTATAACGAGGGCAACGAGGTTTTCCAAATGGGAGTTCCACTAGATAGAATGCTACTCATCACAGAAGGCACATTATGGACCTACAAAAGTAACAGTAATGATTGTCATGTTGCAACTGAAAACGCAGAAACGGGTAGTATTTCACGTTGCCCATCAGTGCGCATCCTTAAGAAAAGTGACTTTTACGTCCCCGAAGAACTGATCGACTGGGTAACAGAAAAGAAGGAGCTATGCCAGCTTCCCTGCTCTTCCTTCAATGTGAAATGCACTTCGAAAGTAGAAGGCTTTGAACTCATGGCCAAGGACTTGAGAAGTGTAGTTTCCAAAAACGAAAACAGGTGGAAATTTGGCATTAGCTGGTCAGACAACAGCATGGCGCAGAAACCTGGAGTGAATCCCAGTACTAGCAGAGACCTGGAGCGCGCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

605

Amino Acids

69.89

Weight (kDa)

9.08

Isoelectric Point (pI)

39.58

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000119)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g10570 FvH4_4g36390 FvH4_7g31840 FvH4_7g31840 FvH4_7g31850 FvH4_7g31850 FvH4_7g31861 FvH4_7g31861 FvH4_7g31950
malus_domestica MD01G1054600.v1.1 MD01G1221100.v1.1 MD01G1221400.v1.1 MD01G1221600.v1.1 MD01G1221800.v1.1 MD01G1222000.v1.1 MD01G1222100.v1.1 MD07G1140800.v1.1 MD07G1291200.v1.1 MD07G1291400.v1.1 MD07G1291500.v1.1 MD07G1291700.v1.1 MD07G1292500.v1.1 MD07G1292700.v1.1 MD07G1292800.v1.1 MD07G1292900.v1.1 MD08G1241600.v1.1 MD11G1083800.v1.1 MD15G1431600.v1.1
prunus_persica Prupe.1G017800_v2.0.a1 Prupe.1G017800_v2.0.a1 Prupe.1G162800_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312700_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G143000_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1
pyrus_communis pycom01g23050 pycom01g23070 pycom01g23090 pycom01g23100 pycom01g23110 pycom01g23120 pycom01g23170 pycom07g26410 pycom07g26440 pycom07g26470 pycom07g26480 pycom07g26490 pycom07g26500 pycom07g26510 pycom07g26530 pycom07g26540 pycom07g26570 pycom07g26580 pycom07g26590 pycom08g20940
rosa_chinensis RchiOBHm_Chr1g0324571 RchiOBHm_Chr1g0336181 RchiOBHm_Chr1g0381061 RchiOBHm_Chr1g0381091 RchiOBHm_Chr1g0381121 RchiOBHm_Chr1g0381131 RchiOBHm_Chr1g0381141 RchiOBHm_Chr1g0381161 RchiOBHm_Chr1g0381211 RchiOBHm_Chr2g0110361 RchiOBHm_Chr2g0120231 RchiOBHm_Chr3g0486281 RchiOBHm_Chr3g0486311 RchiOBHm_Chr3g0486401 RchiOBHm_Chr4g0409511 RchiOBHm_Chr4g0409521 RchiOBHm_Chr5g0017271 RchiOBHm_Chr5g0048781 RchiOBHm_Chr5g0048811
rosa_laevigata RLG00000002401 RLG00000008559 RLG00000017798 RLG00000017799 RLG00000023082 RLG00000023088 RLG00000026230 RLG00000026238 RLG00000026240 RLG00000026241 RLG00000026242 RLG00000026243 RLG00000026244 RLG00000026246 RLG00000026247 RLG00000026248 RLG00000029876 RLG00000030189 RLG00000034579
rosa_multiflora Rmu_co8101374.1_g000001 Rmu_co8309149.1_g000001 Rmu_co8450063.1_g000001 Rmu_sc0000441.1_g000094 Rmu_sc0000479.1_g000005 Rmu_sc0000647.1_g000006 Rmu_sc0001393.1_g000031 Rmu_sc0001423.1_g000037 Rmu_sc0001616.1_g000015 Rmu_sc0001857.1_g000011 Rmu_sc0002183.1_g000013 Rmu_sc0002183.1_g000028 Rmu_sc0002183.1_g000030 Rmu_sc0002688.1_g000003 Rmu_sc0002688.1_g000020 Rmu_sc0003801.1_g000003 Rmu_sc0003801.1_g000004 Rmu_sc0004125.1_g000006 Rmu_sc0004494.1_g000005 Rmu_sc0004494.1_g000006 Rmu_sc0004494.1_g000008 Rmu_sc0004494.1_g000009 Rmu_sc0005842.1_g000004 Rmu_sc0006872.1_g000001 Rmu_sc0006872.1_g000005 Rmu_sc0006872.1_g000009 Rmu_sc0006872.1_g000010 Rmu_sc0008053.1_g000026
rosa_roxburghii Rroxscaffold_159G00432960 Rroxscaffold_1G00033060 Rroxscaffold_2G00123150 Rroxscaffold_2G00123170 Rroxscaffold_2G00133500 Rroxscaffold_2G00133550 Rroxscaffold_4G00278650 Rroxscaffold_4G00278750 Rroxscaffold_4G00278790 Rroxscaffold_4G00278800 Rroxscaffold_4G00278810 Rroxscaffold_4G00325390 Rroxscaffold_5G00354010 Rroxscaffold_6G00395890 Rroxscaffold_6G00395900 Rroxscaffold_6G00395920
rosa_rugosa Rorug01G0046900.1 Rorug01G0427000 Rorug01G0427100 Rorug01G0427200 Rorug01G0427300 Rorug01G0427400 Rorug01G0427500 Rorug01G0427500 Rorug01G0427600 Rorug01G0427600 Rorug01G0427700 Rorug01G0427700 Rorug01G0427800 Rorug01G0428700 Rorug02G0166400 Rorug02G0166500 Rorug02G0166500 Rorug02G0166600 Rorug02G0166600 Rorug02G0166700 Rorug02G0167300 Rorug02G0167300 Rorug02G0167300 Rorug03G0224600 Rorug03G0224600 Rorug04G0094400 Rorug05G0241100 Rorug05G0241200
rosa_samantha Rh1BG407700 Rh1BG407900 Rh1BG409000 Rh1CG064700 Rh1CG420900 Rh1CG421000 Rh1CG421200 Rh1CG421300 Rh1CG421800 Rh1CG421900 Rh1CG422000 Rh1CG422200 Rh1CG422300 Rh1CG423600 Rh1DG437600 Rh1DG438900 Rh1DG439000 Rh1DG440300 Rh2AG219100 Rh2CG220700 Rh2DG225300 Rh3AG274400 Rh3AG274600 Rh3CG308900 Rh3DG305800 Rh4AG156400 Rh5AG129000 Rh5AG320900 Rh5CG139600
rosa_wichuraiana Rw1G005300 Rw1G039280 Rw1G039300 Rw1G039310 Rw1G039320 Rw1G039330 Rw1G039340 Rw1G039360 Rw1G039390 Rw2G016910 Rw2G022800 Rw3G024330 Rw3G024340 Rw3G024350 Rw3G024400 Rw4G012810 Rw5G030120 Rw5G030280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1571
Acc16I TGCGCA 2 cut(s) 372, 1547
Acc65I GGTACC 1 cut(s) 16
AccB1I GGYRCC 2 cut(s) 16, 409
AccII CGCG 2 cut(s) 91, 1809
AciI CCGC 5 cut(s) 89, 443, 583, 873, 924
AclWI GGATC 2 cut(s) 89, 104
AcoI YGGCCR 2 cut(s) 921, 1683
AcsI RAATTY 5 cut(s) 422, 601, 642, 1183, 1730
AcuI CTGAAG 1 cut(s) 927
AcyI GRCGYC 1 cut(s) 787
AfaI GTAC 8 cut(s) 18, 62, 752, 811, 859, 1320, 1350, 1789
AflII CTTAAG 1 cut(s) 1553
AflIII ACRYGT 1 cut(s) 1024
AgsI TTSAA 9 cut(s) 126, 767, 818, 1033, 1039, 1135, 1189, 1642, 1676
AjnI CCWGG 2 cut(s) 1771, 1800
AjuI GAANNNNNNNTTGG 2 cut(s) 1404, 1436
Alw26I GTCTC 2 cut(s) 211, 1791
AlwI GGATC 2 cut(s) 89, 104
AoxI GGCC 3 cut(s) 568, 921, 1683
ApeKI GCWGC 1 cut(s) 440
ApoI RAATTY 5 cut(s) 422, 601, 642, 1183, 1730
AsiSI GCGATCGC 1 cut(s) 308
Asp718I GGTACC 1 cut(s) 16
AspLEI GCGC 6 cut(s) 373, 492, 1548, 1765, 1809, 1811
AspS9I GGNCC 2 cut(s) 1174, 1464
AsuII TTCGAA 3 cut(s) 428, 558, 1658
AsuNHI GCTAGC 1 cut(s) 481
AvaII GGWCC 2 cut(s) 1174, 1464
BalI TGGCCA 1 cut(s) 1685
BanI GGYRCC 2 cut(s) 16, 409
BbsI GAAGAC 1 cut(s) 544
BbvI GCAGC 1 cut(s) 452
BccI CCATC 7 cut(s) 368, 1098, 1149, 1153, 1330, 1337, 1546
BceAI ACGGC 1 cut(s) 936
BciT130I CCWGG 2 cut(s) 1773, 1802
BclI TGATCA 1 cut(s) 1243
BcoDI GTCTC 2 cut(s) 211, 1791
BfaI CTAG 5 cut(s) 482, 614, 1310, 1427, 1791
BfmI CTRYAG 1 cut(s) 288
BfoI RGCGCY 1 cut(s) 493
BfrI CTTAAG 1 cut(s) 1553
BisI GCNGC 3 cut(s) 441, 584, 924
BlsI GCNGC 3 cut(s) 442, 585, 925
BmcAI AGTACT 3 cut(s) 859, 1350, 1789
Bme1390I CCNGG 2 cut(s) 1773, 1802
Bme18I GGWCC 2 cut(s) 1174, 1464
BmgT120I GGNCC 2 cut(s) 1174, 1464
BmiI GGNNCC 3 cut(s) 18, 411, 1176
BmrFI CCNGG 2 cut(s) 1773, 1802
BmrI ACTGGG 2 cut(s) 1603, 1779
BmsI GCATC 3 cut(s) 106, 358, 1557
BmtI GCTAGC 1 cut(s) 485
BmuI ACTGGG 2 cut(s) 1603, 1779
BpiI GAAGAC 1 cut(s) 544
BpmI CTGGAG 1 cut(s) 1794
Bpu14I TTCGAA 3 cut(s) 428, 558, 1658
BpuEI CTTGAG 1 cut(s) 1714
BsaBI GATNNNNATC 1 cut(s) 1242
BsaHI GRCGYC 1 cut(s) 787
BsaI GGTCTC 1 cut(s) 1791
BsaJI CCNNGG 6 cut(s) 571, 629, 736, 1089, 1294, 1686
BsaWI WCCGGW 1 cut(s) 412
Bse1I ACTGG 6 cut(s) 236, 682, 1227, 1379, 1598, 1785
Bse8I GATNNNNATC 1 cut(s) 1242
BseBI CCWGG 2 cut(s) 1773, 1802
BseDI CCNNGG 6 cut(s) 571, 629, 736, 1089, 1294, 1686
BseGI GGATG 6 cut(s) 827, 1160, 1164, 1341, 1345, 1548
BseJI GATNNNNATC 1 cut(s) 1242
BseMII CTCAG 1 cut(s) 671
BseNI ACTGG 6 cut(s) 236, 682, 1227, 1379, 1598, 1785
BsePI GCGCGC 1 cut(s) 1807
BseX3I CGGCCG 1 cut(s) 921
BseXI GCAGC 1 cut(s) 452
BseYI CCCAGC 1 cut(s) 473
Bsh1236I CGCG 2 cut(s) 91, 1809
Bsh1285I CGRYCG 2 cut(s) 308, 924
BshFI GGCC 3 cut(s) 570, 923, 1685
BshNI GGYRCC 2 cut(s) 16, 409
BsiEI CGRYCG 2 cut(s) 308, 924
BsiSI CCGG 1 cut(s) 413
BslFI GGGAC 3 cut(s) 816, 1160, 1559
BsmAI GTCTC 2 cut(s) 211, 1791
BsmFI GGGAC 3 cut(s) 816, 1160, 1559
BsmI GAATGC 3 cut(s) 919, 949, 1440
BsnI GGCC 3 cut(s) 570, 923, 1685
Bso31I GGTCTC 1 cut(s) 1791
Bsp119I TTCGAA 3 cut(s) 428, 558, 1658
Bsp143I GATC 5 cut(s) 94, 109, 305, 1243, 1587
Bsp19I CCATGG 2 cut(s) 571, 1089
BspACI CCGC 5 cut(s) 89, 443, 583, 873, 924
BspANI GGCC 3 cut(s) 570, 923, 1685
BspCNI CTCAG 1 cut(s) 670
BspFNI CGCG 2 cut(s) 91, 1809
BspHI TCATGA 2 cut(s) 1050, 1246
BspLI GGNNCC 3 cut(s) 18, 411, 1176
BspOI GCTAGC 1 cut(s) 485
BspPI GGATC 2 cut(s) 89, 104
BspQI GCTCTTC 1 cut(s) 1639
BspT104I TTCGAA 3 cut(s) 428, 558, 1658
BspT107I GGYRCC 2 cut(s) 16, 409
BspTI CTTAAG 1 cut(s) 1553
BspTNI GGTCTC 1 cut(s) 1791
BsrI ACTGG 6 cut(s) 236, 682, 1227, 1379, 1598, 1785
BssECI CCNNGG 6 cut(s) 571, 629, 736, 1089, 1294, 1686
BssHII GCGCGC 1 cut(s) 1807
BssMI GATC 5 cut(s) 94, 109, 305, 1243, 1587
BssNI GRCGYC 1 cut(s) 787
BssT1I CCWWGG 4 cut(s) 571, 736, 1089, 1686
Bst2UI CCWGG 2 cut(s) 1773, 1802
Bst4CI ACNGT 3 cut(s) 814, 1370, 1481
Bst6I CTCTTC 3 cut(s) 903, 1221, 1639
BstACI GRCGYC 1 cut(s) 787
BstAFI CTTAAG 1 cut(s) 1553
BstBI TTCGAA 3 cut(s) 428, 558, 1658
BstC8I GCNNGC 4 cut(s) 483, 1329, 1622, 1809
BstDEI CTNAG 2 cut(s) 657, 1283
BstDSI CCRYGG 2 cut(s) 571, 1089
BstF5I GGATG 6 cut(s) 827, 1160, 1164, 1341, 1345, 1548
BstFNI CGCG 2 cut(s) 91, 1809
BstH2I RGCGCY 1 cut(s) 493
BstHHI GCGC 6 cut(s) 373, 492, 1548, 1765, 1809, 1811
BstKTI GATC 5 cut(s) 97, 112, 308, 1246, 1590
BstMAI GTCTC 2 cut(s) 211, 1791
BstMBI GATC 5 cut(s) 94, 109, 305, 1243, 1587
BstMCI CGRYCG 2 cut(s) 308, 924
BstMWI GCNNNNNNNGC 5 cut(s) 487, 496, 535, 923, 1621
BstNI CCWGG 2 cut(s) 1773, 1802
BstNSI RCATGY 2 cut(s) 195, 1028
BstSCI CCNGG 2 cut(s) 1771, 1800
BstSFI CTRYAG 1 cut(s) 288
BstUI CGCG 2 cut(s) 91, 1809
BstV1I GCAGC 1 cut(s) 452
BstV2I GAAGAC 1 cut(s) 544
BstX2I RGATCY 2 cut(s) 94, 109
BstYI RGATCY 2 cut(s) 94, 109
BstZI CGGCCG 1 cut(s) 921
BsuRI GGCC 3 cut(s) 570, 923, 1685
BtgI CCRYGG 2 cut(s) 571, 1089
BtgZI GCGATG 1 cut(s) 184
BtsCI GGATG 6 cut(s) 827, 1160, 1164, 1341, 1345, 1548
BtsIMutI CAGTG 3 cut(s) 312, 1386, 1548
Cac8I GCNNGC 4 cut(s) 483, 1329, 1622, 1809
CciI TCATGA 2 cut(s) 1050, 1246
CfoI GCGC 6 cut(s) 373, 492, 1548, 1765, 1809, 1811
Cfr13I GGNCC 2 cut(s) 1174, 1464
CseI GACGC 1 cut(s) 776
Csp6I GTAC 8 cut(s) 17, 61, 751, 810, 858, 1319, 1349, 1788
CviQI GTAC 8 cut(s) 17, 61, 751, 810, 858, 1319, 1349, 1788
DdeI CTNAG 2 cut(s) 657, 1283
DpnI GATC 5 cut(s) 96, 111, 307, 1245, 1589
DpnII GATC 5 cut(s) 94, 109, 305, 1243, 1587
DrdI GACNNNNNNGTC 1 cut(s) 1571
DseDI GACNNNNNNGTC 1 cut(s) 1571
EaeI YGGCCR 2 cut(s) 921, 1683
EagI CGGCCG 1 cut(s) 921
Eam1104I CTCTTC 3 cut(s) 903, 1221, 1639
EarI CTCTTC 3 cut(s) 903, 1221, 1639
EclXI CGGCCG 1 cut(s) 921
Eco130I CCWWGG 4 cut(s) 571, 736, 1089, 1686
Eco31I GGTCTC 1 cut(s) 1791
Eco47I GGWCC 2 cut(s) 1174, 1464
Eco52I CGGCCG 1 cut(s) 921
Eco57I CTGAAG 1 cut(s) 927
EcoO109I RGGNCCY 1 cut(s) 1174
EcoRII CCWGG 2 cut(s) 1771, 1800
EcoT14I CCWWGG 4 cut(s) 571, 736, 1089, 1686
ErhI CCWWGG 4 cut(s) 571, 736, 1089, 1686
FalI AAGNNNNNCTT 2 cut(s) 818, 850
FaqI GGGAC 3 cut(s) 816, 1160, 1559
FauI CCCGC 1 cut(s) 880
FbaI TGATCA 1 cut(s) 1243
Fnu4HI GCNGC 3 cut(s) 441, 584, 924
FokI GGATG 6 cut(s) 834, 1167, 1171, 1348, 1352, 1535
Fsp4HI GCNGC 3 cut(s) 441, 584, 924
FspAI RTGCGCAY 2 cut(s) 372, 1547
FspBI CTAG 5 cut(s) 482, 614, 1310, 1427, 1791
FspI TGCGCA 2 cut(s) 372, 1547
GlaI GCGC 6 cut(s) 372, 491, 1547, 1764, 1808, 1810
GluI GCNGC 3 cut(s) 441, 584, 924
GsaI CCCAGC 1 cut(s) 477
GsuI CTGGAG 1 cut(s) 1794
HaeII RGCGCY 1 cut(s) 493
HaeIII GGCC 3 cut(s) 570, 923, 1685
HapII CCGG 1 cut(s) 413
HgaI GACGC 1 cut(s) 776
HhaI GCGC 6 cut(s) 373, 492, 1548, 1765, 1809, 1811
Hin1I GRCGYC 1 cut(s) 787
Hin6I GCGC 6 cut(s) 371, 490, 1546, 1763, 1807, 1809
HinP1I GCGC 6 cut(s) 371, 490, 1546, 1763, 1807, 1809
HindIII AAGCTT 1 cut(s) 1325
HinfI GANTC 5 cut(s) 80, 595, 829, 1252, 1780
HpaII CCGG 1 cut(s) 413
Hpy166II GTNNAC 1 cut(s) 271
Hpy188I TCNGA 6 cut(s) 400, 600, 660, 989, 1272, 1750
Hpy188III TCNNGA 4 cut(s) 113, 169, 1051, 1247
Hpy8I GTNNAC 1 cut(s) 271
Hpy99I CGWCG 1 cut(s) 792
HpyAV CCTTC 7 cut(s) 424, 812, 1069, 1445, 1603, 1648, 1661
HpyCH4III ACNGT 3 cut(s) 814, 1370, 1481
HpyCH4IV ACGT 2 cut(s) 1531, 1572
HpyF10VI GCNNNNNNNGC 5 cut(s) 487, 496, 535, 923, 1621
HpyF3I CTNAG 2 cut(s) 657, 1283
HpySE526I ACGT 2 cut(s) 1531, 1572
Hsp92I GRCGYC 1 cut(s) 787
HspAI GCGC 6 cut(s) 371, 490, 1546, 1763, 1807, 1809
KpnI GGTACC 1 cut(s) 20
Ksp22I TGATCA 1 cut(s) 1243
Kzo9I GATC 5 cut(s) 94, 109, 305, 1243, 1587
LguI GCTCTTC 1 cut(s) 1639
LmnI GCTCC 3 cut(s) 740, 1612, 1804
Lsp1109I GCAGC 1 cut(s) 452
LweI GCATC 3 cut(s) 106, 358, 1557
MaeI CTAG 5 cut(s) 482, 614, 1310, 1427, 1791
MaeII ACGT 2 cut(s) 1531, 1572
MaeIII GTNAC 7 cut(s) 81, 319, 848, 1364, 1475, 1562, 1597
MalI GATC 5 cut(s) 96, 111, 307, 1245, 1589
MboI GATC 5 cut(s) 94, 109, 305, 1243, 1587
MfeI CAATTG 1 cut(s) 1130
MflI RGATCY 2 cut(s) 94, 109
MlsI TGGCCA 1 cut(s) 1685
MluNI TGGCCA 1 cut(s) 1685
MlyI GAGTC 2 cut(s) 89, 838
MnlI CCTC 9 cut(s) 560, 624, 838, 965, 1102, 1269, 1304, 1387, 1396
Mox20I TGGCCA 1 cut(s) 1685
MscI TGGCCA 1 cut(s) 1685
MseI TTAA 8 cut(s) 702, 882, 1148, 1200, 1212, 1263, 1554, 1813
Msp20I TGGCCA 1 cut(s) 1685
MspA1I CMGCKG 1 cut(s) 443
MspCI CTTAAG 1 cut(s) 1553
MspI CCGG 1 cut(s) 413
MspR9I CCNGG 2 cut(s) 1773, 1802
MunI CAATTG 1 cut(s) 1130
Mva1269I GAATGC 3 cut(s) 919, 949, 1440
MvaI CCWGG 2 cut(s) 1773, 1802
MvnI CGCG 2 cut(s) 91, 1809
MwoI GCNNNNNNNGC 5 cut(s) 487, 496, 535, 923, 1621
NcoI CCATGG 2 cut(s) 571, 1089
NdeII GATC 5 cut(s) 94, 109, 305, 1243, 1587
NheI GCTAGC 1 cut(s) 481
NlaIV GGNNCC 3 cut(s) 18, 411, 1176
NmeAIII GCCGAG 2 cut(s) 654, 1275
NmuCI GTSAC 4 cut(s) 81, 319, 848, 1562
NsbI TGCGCA 2 cut(s) 372, 1547
NspI RCATGY 2 cut(s) 195, 1028
NspV TTCGAA 3 cut(s) 428, 558, 1658
PagI TCATGA 2 cut(s) 1050, 1246
PauI GCGCGC 1 cut(s) 1807
PciI ACATGT 1 cut(s) 1024
PciSI GCTCTTC 1 cut(s) 1639
PcsI WCGNNNNNNNCGW 1 cut(s) 1398
PctI GAATGC 3 cut(s) 919, 949, 1440
PfeI GAWTC 3 cut(s) 595, 1252, 1780
PkrI GCNGC 3 cut(s) 442, 585, 925
Ple19I CGATCG 1 cut(s) 308
PleI GAGTC 2 cut(s) 88, 837
PpsI GAGTC 2 cut(s) 88, 837
PpuMI RGGWCCY 1 cut(s) 1174
PscI ACATGT 1 cut(s) 1024
Psp5II RGGWCCY 1 cut(s) 1174
Psp6I CCWGG 2 cut(s) 1771, 1800
PspFI CCCAGC 1 cut(s) 473
PspGI CCWGG 2 cut(s) 1771, 1800
PspN4I GGNNCC 3 cut(s) 18, 411, 1176
PspPI GGNCC 2 cut(s) 1174, 1464
PspPPI RGGWCCY 1 cut(s) 1174
PsuI RGATCY 2 cut(s) 94, 109
PteI GCGCGC 1 cut(s) 1807
PvuI CGATCG 1 cut(s) 308
RgaI GCGATCGC 1 cut(s) 308
RsaI GTAC 8 cut(s) 18, 62, 752, 811, 859, 1320, 1350, 1789
RsaNI GTAC 8 cut(s) 17, 61, 751, 810, 858, 1319, 1349, 1788
SapI GCTCTTC 1 cut(s) 1639
SaqAI TTAA 8 cut(s) 702, 882, 1148, 1200, 1212, 1263, 1554, 1813
SatI GCNGC 3 cut(s) 441, 584, 924
Sau3AI GATC 5 cut(s) 94, 109, 305, 1243, 1587
Sau96I GGNCC 2 cut(s) 1174, 1464
ScaI AGTACT 3 cut(s) 859, 1350, 1789
SchI GAGTC 2 cut(s) 89, 838
ScrFI CCNGG 2 cut(s) 1773, 1802
SfaAI GCGATCGC 1 cut(s) 308
SfaNI GCATC 3 cut(s) 106, 358, 1557
SfcI CTRYAG 1 cut(s) 288
SfuI TTCGAA 3 cut(s) 428, 558, 1658
SgfI GCGATCGC 1 cut(s) 308
SinI GGWCC 2 cut(s) 1174, 1464
SmlI CTYRAG 2 cut(s) 1553, 1693
SmoI CTYRAG 2 cut(s) 1553, 1693
SsiI CCGC 5 cut(s) 89, 443, 583, 873, 924
SspI AATATT 3 cut(s) 546, 942, 1267
SspMI CTAG 5 cut(s) 482, 614, 1310, 1427, 1791
StyD4I CCNGG 2 cut(s) 1771, 1800
StyI CCWWGG 4 cut(s) 571, 736, 1089, 1686
TaaI ACNGT 3 cut(s) 814, 1370, 1481
TaiI ACGT 2 cut(s) 1534, 1575
TaqI TCGA 6 cut(s) 428, 558, 640, 790, 1590, 1658
TatI WGTACW 5 cut(s) 60, 809, 857, 1348, 1787
TauI GCSGC 2 cut(s) 586, 926
TfiI GAWTC 3 cut(s) 595, 1252, 1780
Tru1I TTAA 8 cut(s) 702, 882, 1148, 1200, 1212, 1263, 1554, 1813
Tru9I TTAA 8 cut(s) 702, 882, 1148, 1200, 1212, 1263, 1554, 1813
TscAI CASTG 3 cut(s) 319, 1386, 1548
TseFI GTSAC 4 cut(s) 81, 319, 848, 1562
TseI GCWGC 1 cut(s) 440
Tsp45I GTSAC 4 cut(s) 81, 319, 848, 1562
TspDTI ATGAA 5 cut(s) 153, 261, 417, 1051, 1062
TspRI CASTG 3 cut(s) 319, 1386, 1548
Vha464I CTTAAG 1 cut(s) 1553
VpaK11BI GGWCC 2 cut(s) 1174, 1464
XapI RAATTY 5 cut(s) 422, 601, 642, 1183, 1730
XceI RCATGY 2 cut(s) 195, 1028
XspI CTAG 5 cut(s) 482, 614, 1310, 1427, 1791
ZrmI AGTACT 3 cut(s) 859, 1350, 1789
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.