Rmu_sc0004494.1_g000005

Cyclic nucleotide-gated ion channel 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004494.1
OG0000119
Physical Location & Seq
Reverse (-)
26753 .. 28991
2239 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004494.1_g000005.1.cds

Sequence Viewer

Length: 1722 bp
atgtggtataagatatttgtgatttcatgtctgatttcagtaaccgcagaccccttgttcttctacatcccctacatcaacaaagataaaaagtgcattgatggggacaagagggtgagaactgcagctctagtcctccgatcactcaccgatatgactttcataatgcatattatacatgaaattcgtgttagtaccaacactgtggtgtcagagatatcaaaaagaggaaagccaggttggccatggaaaaaggcagagttacttggctttgccaaggcaatatctcagaagatgtcctggttatctatctccatcataatagacttcatagccattcttccgatcccacaagtggcactatcggtattctttctgaaaatggatggctctgactgcaaaaggaagattttaaacgggctccttctccttcaatatatgccaaagatttatagaatctacctttcgtgtaaagaacttaaacaaaccggaatatgggctagaggtgcattcaatatttttctctacatcctcgccagtcatgtacttggagccttttggtatttcctttctgttcaacgagagacatcatgctggcatgaggcttgtgaacaacatcctgataccataagatgtatatcaacttactactgtgatgacagacctacagatccacaatatattagtaatatctcactcctggatgaaaattgcccggtaaatccatcagatgcaacacaatttaatttcggaatcttccttaatgcccttgagtccgtgttcaaaactaactacgtaaatttctgcagttctcttggtcaaaatttggaaacgagtacctatgtgtgggaaaactgcttcgcaatcgttatatctctaactggtttgctactagttttgtatcttattggaaatgtacagacgtatatacagttggcaactacgaaatcggaagagataagacagaagatgataatgaaagagctagagatacaatggtggatgtccagaaatcatctccctaacgatatgaagacagtgatcatcgaaaacgtgagacagaaattggaagaaaacaaagatgttcatgtggagaatctactctctattcttcccctgaaggacagaaggtccataaagcgccttctctgcatggactcacttaagaaagtaccgatgcttcgatatatggatgaaagtgtgttaaaactcatctgcgacaatctgaaaccagtaatctacacagagaacagttatgtaattcgagcaggagaaccacttgatctaatgctcttcaacgcagaaggcattatatggacttacacaacaagtactgatggttcaataaaattgggttcctcaatcacagagtgtcttggtaaaggtgatttctatggagaagaacttttgagttgggcttcctcatacatgtccttctccgacctccctatctcgacccaaaatgtaaaatgccatacaaaagttgaagccttttctctcaaggcaaaggacttgaaggctgtggtctccaaattctggtggcatttcagcaaggcggttcccgatttgaacagaaacaattctcagctggaggaattggctctttcttccataagagcccgtcgccgcaatcgattaaagaagcatataaaagctcctcaattgtctacttactcccaagaacttgggtacctgcggctataccctgttaatcgttgctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
Ion_trans

Protein Analysis

573

Amino Acids

66.11

Weight (kDa)

8.9

Isoelectric Point (pI)

46.61

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000119)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g10570 FvH4_4g36390 FvH4_7g31840 FvH4_7g31840 FvH4_7g31850 FvH4_7g31850 FvH4_7g31861 FvH4_7g31861 FvH4_7g31950
malus_domestica MD01G1054600.v1.1 MD01G1221100.v1.1 MD01G1221400.v1.1 MD01G1221600.v1.1 MD01G1221800.v1.1 MD01G1222000.v1.1 MD01G1222100.v1.1 MD07G1140800.v1.1 MD07G1291200.v1.1 MD07G1291400.v1.1 MD07G1291500.v1.1 MD07G1291700.v1.1 MD07G1292500.v1.1 MD07G1292700.v1.1 MD07G1292800.v1.1 MD07G1292900.v1.1 MD08G1241600.v1.1 MD11G1083800.v1.1 MD15G1431600.v1.1
prunus_persica Prupe.1G017800_v2.0.a1 Prupe.1G017800_v2.0.a1 Prupe.1G162800_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312700_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G143000_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1
pyrus_communis pycom01g23050 pycom01g23070 pycom01g23090 pycom01g23100 pycom01g23110 pycom01g23120 pycom01g23170 pycom07g26410 pycom07g26440 pycom07g26470 pycom07g26480 pycom07g26490 pycom07g26500 pycom07g26510 pycom07g26530 pycom07g26540 pycom07g26570 pycom07g26580 pycom07g26590 pycom08g20940
rosa_chinensis RchiOBHm_Chr1g0324571 RchiOBHm_Chr1g0336181 RchiOBHm_Chr1g0381061 RchiOBHm_Chr1g0381091 RchiOBHm_Chr1g0381121 RchiOBHm_Chr1g0381131 RchiOBHm_Chr1g0381141 RchiOBHm_Chr1g0381161 RchiOBHm_Chr1g0381211 RchiOBHm_Chr2g0110361 RchiOBHm_Chr2g0120231 RchiOBHm_Chr3g0486281 RchiOBHm_Chr3g0486311 RchiOBHm_Chr3g0486401 RchiOBHm_Chr4g0409511 RchiOBHm_Chr4g0409521 RchiOBHm_Chr5g0017271 RchiOBHm_Chr5g0048781 RchiOBHm_Chr5g0048811
rosa_laevigata RLG00000002401 RLG00000008559 RLG00000017798 RLG00000017799 RLG00000023082 RLG00000023088 RLG00000026230 RLG00000026238 RLG00000026240 RLG00000026241 RLG00000026242 RLG00000026243 RLG00000026244 RLG00000026246 RLG00000026247 RLG00000026248 RLG00000029876 RLG00000030189 RLG00000034579
rosa_multiflora Rmu_co8101374.1_g000001 Rmu_co8309149.1_g000001 Rmu_co8450063.1_g000001 Rmu_sc0000441.1_g000094 Rmu_sc0000479.1_g000005 Rmu_sc0000647.1_g000006 Rmu_sc0001393.1_g000031 Rmu_sc0001423.1_g000037 Rmu_sc0001616.1_g000015 Rmu_sc0001857.1_g000011 Rmu_sc0002183.1_g000013 Rmu_sc0002183.1_g000028 Rmu_sc0002183.1_g000030 Rmu_sc0002688.1_g000003 Rmu_sc0002688.1_g000020 Rmu_sc0003801.1_g000003 Rmu_sc0003801.1_g000004 Rmu_sc0004125.1_g000006 Rmu_sc0004494.1_g000005 Rmu_sc0004494.1_g000006 Rmu_sc0004494.1_g000008 Rmu_sc0004494.1_g000009 Rmu_sc0005842.1_g000004 Rmu_sc0006872.1_g000001 Rmu_sc0006872.1_g000005 Rmu_sc0006872.1_g000009 Rmu_sc0006872.1_g000010 Rmu_sc0008053.1_g000026
rosa_roxburghii Rroxscaffold_159G00432960 Rroxscaffold_1G00033060 Rroxscaffold_2G00123150 Rroxscaffold_2G00123170 Rroxscaffold_2G00133500 Rroxscaffold_2G00133550 Rroxscaffold_4G00278650 Rroxscaffold_4G00278750 Rroxscaffold_4G00278790 Rroxscaffold_4G00278800 Rroxscaffold_4G00278810 Rroxscaffold_4G00325390 Rroxscaffold_5G00354010 Rroxscaffold_6G00395890 Rroxscaffold_6G00395900 Rroxscaffold_6G00395920
rosa_rugosa Rorug01G0046900.1 Rorug01G0427000 Rorug01G0427100 Rorug01G0427200 Rorug01G0427300 Rorug01G0427400 Rorug01G0427500 Rorug01G0427500 Rorug01G0427600 Rorug01G0427600 Rorug01G0427700 Rorug01G0427700 Rorug01G0427800 Rorug01G0428700 Rorug02G0166400 Rorug02G0166500 Rorug02G0166500 Rorug02G0166600 Rorug02G0166600 Rorug02G0166700 Rorug02G0167300 Rorug02G0167300 Rorug02G0167300 Rorug03G0224600 Rorug03G0224600 Rorug04G0094400 Rorug05G0241100 Rorug05G0241200
rosa_samantha Rh1BG407700 Rh1BG407900 Rh1BG409000 Rh1CG064700 Rh1CG420900 Rh1CG421000 Rh1CG421200 Rh1CG421300 Rh1CG421800 Rh1CG421900 Rh1CG422000 Rh1CG422200 Rh1CG422300 Rh1CG423600 Rh1DG437600 Rh1DG438900 Rh1DG439000 Rh1DG440300 Rh2AG219100 Rh2CG220700 Rh2DG225300 Rh3AG274400 Rh3AG274600 Rh3CG308900 Rh3DG305800 Rh4AG156400 Rh5AG129000 Rh5AG320900 Rh5CG139600
rosa_wichuraiana Rw1G005300 Rw1G039280 Rw1G039300 Rw1G039310 Rw1G039320 Rw1G039330 Rw1G039340 Rw1G039360 Rw1G039390 Rw2G016910 Rw2G022800 Rw3G024330 Rw3G024340 Rw3G024350 Rw3G024400 Rw4G012810 Rw5G030120 Rw5G030280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1701
Acc65I GGTACC 1 cut(s) 1689
AccB1I GGYRCC 1 cut(s) 1689
AccB7I CCANNNNNTGG 1 cut(s) 1536
AccI GTMKAC 1 cut(s) 1667
AciI CCGC 4 cut(s) 45, 1556, 1627, 1696
AclWI GGATC 2 cut(s) 340, 665
AcoI YGGCCR 1 cut(s) 242
AcsI RAATTY 4 cut(s) 183, 799, 823, 1532
AcuI CTGAAG 1 cut(s) 1139
AdeI CACNNNGTG 1 cut(s) 1371
AfaI GTAC 7 cut(s) 196, 546, 838, 918, 1173, 1333, 1691
AfiI CCNNNNNNNGG 4 cut(s) 355, 495, 846, 1536
AflII CTTAAG 1 cut(s) 1163
AflIII ACRYGT 1 cut(s) 1428
AgsI TTSAA 9 cut(s) 434, 514, 578, 784, 1297, 1344, 1487, 1516, 1570
AhdI GACNNNNNGTC 1 cut(s) 1129
AhlI ACTAGT 1 cut(s) 892
AjnI CCWGG 3 cut(s) 235, 299, 699
AjuI GAANNNNNNNTTGG 2 cut(s) 223, 255
AleI CACNNNNGTG 1 cut(s) 206
AluBI AGCT 4 cut(s) 128, 985, 1588, 1655
AluI AGCT 4 cut(s) 128, 985, 1588, 1655
Alw26I GTCTC 3 cut(s) 578, 1051, 1531
AlwI GGATC 2 cut(s) 340, 665
AoxI GGCC 1 cut(s) 242
ApeKI GCWGC 1 cut(s) 125
ApoI RAATTY 4 cut(s) 183, 799, 823, 1532
Asp700I GAANNNNTTC 1 cut(s) 1579
Asp718I GGTACC 1 cut(s) 1689
AspLEI GCGC 1 cut(s) 1143
AspS9I GGNCC 1 cut(s) 1131
AsuC2I CCSGG 1 cut(s) 716
AsuHPI GGTGA 3 cut(s) 127, 139, 1397
AvaII GGWCC 1 cut(s) 1131
BaeI ACNNNNGTAYC 4 cut(s) 983, 1016, 1673, 1706
BalI TGGCCA 1 cut(s) 244
BanI GGYRCC 1 cut(s) 1689
BanII GRGCYC 2 cut(s) 423, 1621
BarI GAAGNNNNNNTAC 2 cut(s) 1164, 1196
BbsI GAAGAC 1 cut(s) 1040
BbvI GCAGC 1 cut(s) 137
BccI CCATC 5 cut(s) 95, 323, 380, 733, 1331
BciT130I CCWGG 3 cut(s) 237, 301, 701
BclI TGATCA 1 cut(s) 1041
BcnI CCSGG 1 cut(s) 716
BcoDI GTCTC 3 cut(s) 578, 1051, 1531
BcuI ACTAGT 1 cut(s) 892
BfaI CTAG 5 cut(s) 131, 501, 893, 986, 1720
BfmI CTRYAG 3 cut(s) 123, 666, 805
BfoI RGCGCY 1 cut(s) 1144
BfrI CTTAAG 1 cut(s) 1163
BfuAI ACCTGC 1 cut(s) 1701
BglI GCCNNNNNGGC 1 cut(s) 241
BisI GCNGC 3 cut(s) 126, 1627, 1697
BlsI GCNGC 3 cut(s) 127, 1628, 1698
BmcAI AGTACT 1 cut(s) 1333
Bme1390I CCNGG 4 cut(s) 237, 301, 701, 716
Bme18I GGWCC 1 cut(s) 1131
BmeRI GACNNNNNGTC 1 cut(s) 1129
BmgT120I GGNCC 1 cut(s) 1131
BmiI GGNNCC 5 cut(s) 422, 553, 1357, 1560, 1691
BmrFI CCNGG 4 cut(s) 237, 301, 701, 716
BmsI GCATC 2 cut(s) 721, 1167
BpiI GAAGAC 1 cut(s) 1040
BpmI CTGGAG 1 cut(s) 1610
BpuEI CTTGAG 2 cut(s) 791, 1484
BpuMI CCSGG 1 cut(s) 716
Bsa29I ATCGAT 1 cut(s) 1633
BsaAI YACGTR 1 cut(s) 796
BsaBI GATNNNNATC 1 cut(s) 637
BsaI GGTCTC 1 cut(s) 1531
BsaJI CCNNGG 2 cut(s) 245, 276
BsaWI WCCGGW 1 cut(s) 488
Bsc4I CCNNNNNNNGG 4 cut(s) 355, 495, 846, 1536
Bse1I ACTGG 3 cut(s) 537, 886, 1232
Bse8I GATNNNNATC 1 cut(s) 637
BseBI CCWGG 3 cut(s) 237, 301, 701
BseCI ATCGAT 1 cut(s) 1633
BseDI CCNNGG 2 cut(s) 245, 276
BseGI GGATG 7 cut(s) 66, 391, 528, 616, 709, 1008, 1198
BseJI GATNNNNATC 1 cut(s) 637
BseLI CCNNNNNNNGG 4 cut(s) 355, 495, 846, 1536
BseMII CTCAG 2 cut(s) 302, 1598
BseNI ACTGG 3 cut(s) 537, 886, 1232
BseRI GAGGAG 1 cut(s) 1647
BseXI GCAGC 1 cut(s) 137
BshFI GGCC 1 cut(s) 244
BshNI GGYRCC 1 cut(s) 1689
BshVI ATCGAT 1 cut(s) 1633
BsiSI CCGG 2 cut(s) 489, 716
BslFI GGGAC 1 cut(s) 119
BslI CCNNNNNNNGG 4 cut(s) 355, 495, 846, 1536
BsmAI GTCTC 3 cut(s) 578, 1051, 1531
BsmFI GGGAC 1 cut(s) 119
BsmI GAATGC 1 cut(s) 509
BsnI GGCC 1 cut(s) 244
Bso31I GGTCTC 1 cut(s) 1531
Bsp1286I GDGCHC 2 cut(s) 423, 1621
Bsp1407I TGTACA 1 cut(s) 916
Bsp143I GATC 5 cut(s) 140, 345, 670, 1041, 1282
Bsp19I CCATGG 1 cut(s) 245
BspACI CCGC 4 cut(s) 45, 1556, 1627, 1696
BspANI GGCC 1 cut(s) 244
BspCNI CTCAG 2 cut(s) 301, 1597
BspDI ATCGAT 1 cut(s) 1633
BspLI GGNNCC 5 cut(s) 422, 553, 1357, 1560, 1691
BspMAI CTGCAG 2 cut(s) 127, 809
BspMI ACCTGC 1 cut(s) 1701
BspPI GGATC 2 cut(s) 340, 665
BspQI GCTCTTC 1 cut(s) 1298
BspT107I GGYRCC 1 cut(s) 1689
BspTI CTTAAG 1 cut(s) 1163
BspTNI GGTCTC 1 cut(s) 1531
BsrGI TGTACA 1 cut(s) 916
BsrI ACTGG 3 cut(s) 537, 886, 1232
BssECI CCNNGG 2 cut(s) 245, 276
BssMI GATC 5 cut(s) 140, 345, 670, 1041, 1282
BssT1I CCWWGG 2 cut(s) 245, 276
Bst2UI CCWGG 3 cut(s) 237, 301, 701
Bst4CI ACNGT 5 cut(s) 205, 653, 933, 1039, 1253
Bst6I CTCTTC 2 cut(s) 948, 1298
BstAFI CTTAAG 1 cut(s) 1163
BstAUI TGTACA 1 cut(s) 916
BstBAI YACGTR 1 cut(s) 796
BstC8I GCNNGC 1 cut(s) 596
BstDEI CTNAG 2 cut(s) 288, 1584
BstDSI CCRYGG 1 cut(s) 245
BstF5I GGATG 7 cut(s) 66, 391, 528, 616, 709, 1008, 1198
BstH2I RGCGCY 1 cut(s) 1144
BstHHI GCGC 1 cut(s) 1143
BstKTI GATC 5 cut(s) 143, 348, 673, 1044, 1285
BstMAI GTCTC 3 cut(s) 578, 1051, 1531
BstMBI GATC 5 cut(s) 140, 345, 670, 1041, 1282
BstMWI GCNNNNNNNGC 4 cut(s) 241, 396, 506, 1149
BstNI CCWGG 3 cut(s) 237, 301, 701
BstNSI RCATGY 1 cut(s) 1432
BstSCI CCNGG 4 cut(s) 235, 299, 699, 714
BstSFI CTRYAG 3 cut(s) 123, 666, 805
BstSNI TACGTA 1 cut(s) 796
BstV1I GCAGC 1 cut(s) 137
BstV2I GAAGAC 1 cut(s) 1040
BstX2I RGATCY 1 cut(s) 670
BstXI CCANNNNNNTGG 2 cut(s) 205, 1685
BstYI RGATCY 1 cut(s) 670
Bsu15I ATCGAT 1 cut(s) 1633
BsuRI GGCC 1 cut(s) 244
BsuTUI ATCGAT 1 cut(s) 1633
BtgI CCRYGG 1 cut(s) 245
BtsCI GGATG 7 cut(s) 66, 391, 528, 616, 709, 1008, 1198
BtsIMutI CAGTG 2 cut(s) 201, 1044
BveI ACCTGC 1 cut(s) 1701
Cac8I GCNNGC 1 cut(s) 596
CfoI GCGC 1 cut(s) 1143
Cfr13I GGNCC 1 cut(s) 1131
ClaI ATCGAT 1 cut(s) 1633
Csp6I GTAC 7 cut(s) 195, 545, 837, 917, 1172, 1332, 1690
CviAII CATG 9 cut(s) 27, 179, 246, 542, 591, 599, 1088, 1153, 1429
CviQI GTAC 7 cut(s) 195, 545, 837, 917, 1172, 1332, 1690
DdeI CTNAG 2 cut(s) 288, 1584
DpnI GATC 5 cut(s) 142, 347, 672, 1043, 1284
DpnII GATC 5 cut(s) 140, 345, 670, 1041, 1282
DraI TTTAAA 1 cut(s) 414
DraIII CACNNNGTG 1 cut(s) 1371
DriI GACNNNNNGTC 1 cut(s) 1129
EaeI YGGCCR 1 cut(s) 242
Eam1104I CTCTTC 2 cut(s) 948, 1298
Eam1105I GACNNNNNGTC 1 cut(s) 1129
EarI CTCTTC 2 cut(s) 948, 1298
Eco105I TACGTA 1 cut(s) 796
Eco130I CCWWGG 2 cut(s) 245, 276
Eco24I GRGCYC 2 cut(s) 423, 1621
Eco31I GGTCTC 1 cut(s) 1531
Eco32I GATATC 1 cut(s) 219
Eco47I GGWCC 1 cut(s) 1131
Eco57I CTGAAG 1 cut(s) 1139
EcoRII CCWGG 3 cut(s) 235, 299, 699
EcoRV GATATC 1 cut(s) 219
EcoT14I CCWWGG 2 cut(s) 245, 276
EcoT22I ATGCAT 1 cut(s) 171
EcoT38I GRGCYC 2 cut(s) 423, 1621
ErhI CCWWGG 2 cut(s) 245, 276
FaeI CATG 9 cut(s) 30, 182, 249, 545, 594, 602, 1091, 1156, 1432
FaqI GGGAC 1 cut(s) 119
FatI CATG 9 cut(s) 26, 178, 245, 541, 590, 598, 1087, 1152, 1428
FbaI TGATCA 1 cut(s) 1041
FblI GTMKAC 1 cut(s) 1667
Fnu4HI GCNGC 3 cut(s) 126, 1627, 1697
FokI GGATG 7 cut(s) 53, 398, 515, 603, 716, 1015, 1205
FriOI GRGCYC 2 cut(s) 423, 1621
Fsp4HI GCNGC 3 cut(s) 126, 1627, 1697
FspBI CTAG 5 cut(s) 131, 501, 893, 986, 1720
GlaI GCGC 1 cut(s) 1142
GluI GCNGC 3 cut(s) 126, 1627, 1697
GsuI CTGGAG 1 cut(s) 1610
HaeII RGCGCY 1 cut(s) 1144
HaeIII GGCC 1 cut(s) 244
HapII CCGG 2 cut(s) 489, 716
HhaI GCGC 1 cut(s) 1143
Hin1II CATG 9 cut(s) 30, 182, 249, 545, 594, 602, 1091, 1156, 1432
Hin6I GCGC 1 cut(s) 1141
HinP1I GCGC 1 cut(s) 1141
HinfI GANTC 5 cut(s) 456, 753, 773, 1096, 1157
HpaII CCGG 2 cut(s) 489, 716
HphI GGTGA 3 cut(s) 127, 139, 1397
Hpy166II GTNNAC 2 cut(s) 611, 1668
Hpy188III TCNNGA 4 cut(s) 620, 1008, 1453, 1562
Hpy8I GTNNAC 2 cut(s) 611, 1668
Hpy99I CGWCG 1 cut(s) 1626
HpyAV CCTTC 8 cut(s) 434, 440, 1114, 1122, 1154, 1298, 1444, 1510
HpyCH4III ACNGT 5 cut(s) 205, 653, 933, 1039, 1253
HpyCH4IV ACGT 3 cut(s) 795, 923, 1053
HpyCH4V TGCA 8 cut(s) 96, 125, 169, 399, 509, 734, 807, 1152
HpyF10VI GCNNNNNNNGC 4 cut(s) 241, 396, 506, 1149
HpyF3I CTNAG 2 cut(s) 288, 1584
HpySE526I ACGT 3 cut(s) 795, 923, 1053
Hsp92II CATG 9 cut(s) 30, 182, 249, 545, 594, 602, 1091, 1156, 1432
HspAI GCGC 1 cut(s) 1141
KpnI GGTACC 1 cut(s) 1693
Ksp22I TGATCA 1 cut(s) 1041
Kzo9I GATC 5 cut(s) 140, 345, 670, 1041, 1282
LguI GCTCTTC 1 cut(s) 1298
LmnI GCTCC 3 cut(s) 426, 551, 1660
Lsp1109I GCAGC 1 cut(s) 137
LweI GCATC 2 cut(s) 721, 1167
MaeI CTAG 5 cut(s) 131, 501, 893, 986, 1720
MaeII ACGT 3 cut(s) 795, 923, 1053
MaeIII GTNAC 2 cut(s) 40, 261
MalI GATC 5 cut(s) 142, 347, 672, 1043, 1284
MboI GATC 5 cut(s) 140, 345, 670, 1041, 1282
MfeI CAATTG 1 cut(s) 1661
MflI RGATCY 1 cut(s) 670
MhlI GDGCHC 2 cut(s) 423, 1621
MlsI TGGCCA 1 cut(s) 244
MluNI TGGCCA 1 cut(s) 244
MlyI GAGTC 2 cut(s) 782, 1151
MmeI TCCRAC 1 cut(s) 1464
Mox20I TGGCCA 1 cut(s) 244
Mph1103I ATGCAT 1 cut(s) 171
MroXI GAANNNNTTC 1 cut(s) 1579
MscI TGGCCA 1 cut(s) 244
MseI TTAA 8 cut(s) 413, 480, 744, 762, 1164, 1205, 1637, 1710
MslI CAYNNNNRTG 2 cut(s) 152, 206
Msp20I TGGCCA 1 cut(s) 244
MspA1I CMGCKG 1 cut(s) 1588
MspCI CTTAAG 1 cut(s) 1163
MspI CCGG 2 cut(s) 489, 716
MspR9I CCNGG 4 cut(s) 237, 301, 701, 716
MunI CAATTG 1 cut(s) 1661
Mva1269I GAATGC 1 cut(s) 509
MvaI CCWGG 3 cut(s) 237, 301, 701
MwoI GCNNNNNNNGC 4 cut(s) 241, 396, 506, 1149
NciI CCSGG 1 cut(s) 716
NcoI CCATGG 1 cut(s) 245
NdeII GATC 5 cut(s) 140, 345, 670, 1041, 1282
NlaIII CATG 9 cut(s) 30, 182, 249, 545, 594, 602, 1091, 1156, 1432
NlaIV GGNNCC 5 cut(s) 422, 553, 1357, 1560, 1691
NsiI ATGCAT 1 cut(s) 171
NspI RCATGY 1 cut(s) 1432
OliI CACNNNNGTG 1 cut(s) 206
PciI ACATGT 1 cut(s) 1428
PciSI GCTCTTC 1 cut(s) 1298
PcsI WCGNNNNNNNCGW 1 cut(s) 1630
PctI GAATGC 1 cut(s) 509
PdmI GAANNNNTTC 1 cut(s) 1579
PfeI GAWTC 3 cut(s) 456, 753, 1096
PflMI CCANNNNNTGG 1 cut(s) 1536
PfoI TCCNGGA 1 cut(s) 699
PkrI GCNGC 3 cut(s) 127, 1628, 1698
PleI GAGTC 2 cut(s) 781, 1151
PpsI GAGTC 2 cut(s) 781, 1151
Ppu21I YACGTR 1 cut(s) 796
PscI ACATGT 1 cut(s) 1428
Psp6I CCWGG 3 cut(s) 235, 299, 699
PspGI CCWGG 3 cut(s) 235, 299, 699
PspN4I GGNNCC 5 cut(s) 422, 553, 1357, 1560, 1691
PspPI GGNCC 1 cut(s) 1131
PsrI GAACNNNNNNTAC 2 cut(s) 1324, 1356
PstI CTGCAG 2 cut(s) 127, 809
PsuI RGATCY 1 cut(s) 670
PvuII CAGCTG 1 cut(s) 1588
RsaI GTAC 7 cut(s) 196, 546, 838, 918, 1173, 1333, 1691
RsaNI GTAC 7 cut(s) 195, 545, 837, 917, 1172, 1332, 1690
RseI CAYNNNNRTG 2 cut(s) 152, 206
SapI GCTCTTC 1 cut(s) 1298
SaqAI TTAA 8 cut(s) 413, 480, 744, 762, 1164, 1205, 1637, 1710
SatI GCNGC 3 cut(s) 126, 1627, 1697
Sau3AI GATC 5 cut(s) 140, 345, 670, 1041, 1282
Sau96I GGNCC 1 cut(s) 1131
ScaI AGTACT 1 cut(s) 1333
SchI GAGTC 2 cut(s) 782, 1151
ScrFI CCNGG 4 cut(s) 237, 301, 701, 716
SduI GDGCHC 2 cut(s) 423, 1621
SfaNI GCATC 2 cut(s) 721, 1167
SfcI CTRYAG 3 cut(s) 123, 666, 805
SinI GGWCC 1 cut(s) 1131
SmiMI CAYNNNNRTG 2 cut(s) 152, 206
SmlI CTYRAG 3 cut(s) 770, 1163, 1499
SmoI CTYRAG 3 cut(s) 770, 1163, 1499
SnaBI TACGTA 1 cut(s) 796
SpeI ACTAGT 1 cut(s) 892
SsiI CCGC 4 cut(s) 45, 1556, 1627, 1696
SspI AATATT 1 cut(s) 517
SspMI CTAG 5 cut(s) 131, 501, 893, 986, 1720
StyD4I CCNGG 4 cut(s) 235, 299, 699, 714
StyI CCWWGG 2 cut(s) 245, 276
TaaI ACNGT 5 cut(s) 205, 653, 933, 1039, 1253
TaiI ACGT 3 cut(s) 798, 926, 1056
TaqI TCGA 5 cut(s) 1047, 1183, 1264, 1454, 1633
TatI WGTACW 3 cut(s) 544, 916, 1331
TauI GCSGC 2 cut(s) 1629, 1699
TfiI GAWTC 3 cut(s) 456, 753, 1096
Tru1I TTAA 8 cut(s) 413, 480, 744, 762, 1164, 1205, 1637, 1710
Tru9I TTAA 8 cut(s) 413, 480, 744, 762, 1164, 1205, 1637, 1710
TscAI CASTG 2 cut(s) 208, 1044
TseI GCWGC 1 cut(s) 125
TspDTI ATGAA 9 cut(s) 15, 151, 195, 319, 720, 992, 1046, 1076, 1209
TspGWI ACGGA 1 cut(s) 766
TspRI CASTG 2 cut(s) 208, 1044
Van91I CCANNNNNTGG 1 cut(s) 1536
Vha464I CTTAAG 1 cut(s) 1163
VpaK11BI GGWCC 1 cut(s) 1131
XapI RAATTY 4 cut(s) 183, 799, 823, 1532
XceI RCATGY 1 cut(s) 1432
XcmI CCANNNNNNNNNTGG 1 cut(s) 243
XmiI GTMKAC 1 cut(s) 1667
XmnI GAANNNNTTC 1 cut(s) 1579
XspI CTAG 5 cut(s) 131, 501, 893, 986, 1720
ZrmI AGTACT 1 cut(s) 1333
Zsp2I ATGCAT 1 cut(s) 171
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.