Rmu_sc0002183.1_g000028

Cyclic nucleotide-gated ion channel 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002183.1
OG0000119
Physical Location & Seq
Forward (+)
112470 .. 115378
2909 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002183.1_g000028.1.cds

Sequence Viewer

Length: 1677 bp
atgtctaaacataaggtacccaactacgatgagagcatcatcgatttgagcgttacacaaggaataggttatgatttcaactgtcctgaggctctatcgcaacatccaatacggaaacgtgaacctgaagaaactcaagcaagcaacaaagggaaaaggccaacagttgcggaagttctttcagttttgaacccatcgtggaatacgatactattaacttcatgtgtgattgcagttttgtttgatcctttgttcttttacattccatacatcaatgagaaagaaaagtgcatgggaatcgataaacaagtgcggactgcagctctggttttccgatcactgacggacatcactttcctagtgcatatcatataccaacttcgtgaagctatcaaatttgcagcttcaaaggttccaagggatacaaattcaaaaaattgggaatgggaatcggtatcccgagctcagatgattaagtttgcgaaggaattttctcgcaaattgtcatggcgctctttcctaactgatgttttcgctattttccccatgccacaactgctaatagtagggttctttttcgaaatgggaggcagtaactatttggagagaagaaagattctgagtggttttgttctaatccaatatgtgccaagaatttatcgaatttatctatcgtataccgcggttacacattccgcattatgggttaaaggtgcattcaatttttttctctacatccttgccagtcatgggccaataaattttccaacaaagattggtttctgcttttggtggggcttgcgaaatttaagttcttttggcacaagtttggaaacaagtacctatctgtgggaaaacacctttgcaattcttatttctatcatcggcttgctattgtttctatatctcattggaaatgttcagttatatatggcgaaggcaattacaagagcggaagaggtaagagagaaaattcagaccaaaaagaacgatatagaaaagtggatggaaaataatgacctccaagatgacatgaaggaagagatcatgaaaaacatcaagaaaaaattggaagaggacataaatgccgatctggagaatctattctctgttcttccctggtataccaagaaagctctaaagcgcgttctttgcatgagtgcgctaagaaaagtaccaatgcttagccagatggatgaaaaagttttgaaaatgatgtgcgactatctgaagccggtgaattacccagagaataccttggtttttcagatgggagaaccatttgatcgaatggtcttcattacagaagggcttatgtggacttacacgactgctactgagagtagtcattatggaaaagcaacaaaaccggctacttctccatccatggataccaacttcctcaagaagggtgattcttatggacacgcgcttctgcagtttgcatcatcatctcttgcggcactccctacctcgaacgcaaatgtccggtgtcacacaagggttgaagcgtttgttctcatggccaaggacttgaaaaacatagtaactaaatgcgaacatttgtggcctttcgactacaatgcttctaaagatgaggcggcggataaggtggcaccactggggcagttgccaaagaagtgtgtatcaacatcgaccactggcaaccgtgggtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
Ion_trans cNMP_binding

Protein Analysis

558

Amino Acids

63.98

Weight (kDa)

8.97

Isoelectric Point (pI)

38.45

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000119)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g10570 FvH4_4g36390 FvH4_7g31840 FvH4_7g31840 FvH4_7g31850 FvH4_7g31850 FvH4_7g31861 FvH4_7g31861 FvH4_7g31950
malus_domestica MD01G1054600.v1.1 MD01G1221100.v1.1 MD01G1221400.v1.1 MD01G1221600.v1.1 MD01G1221800.v1.1 MD01G1222000.v1.1 MD01G1222100.v1.1 MD07G1140800.v1.1 MD07G1291200.v1.1 MD07G1291400.v1.1 MD07G1291500.v1.1 MD07G1291700.v1.1 MD07G1292500.v1.1 MD07G1292700.v1.1 MD07G1292800.v1.1 MD07G1292900.v1.1 MD08G1241600.v1.1 MD11G1083800.v1.1 MD15G1431600.v1.1
prunus_persica Prupe.1G017800_v2.0.a1 Prupe.1G017800_v2.0.a1 Prupe.1G162800_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312700_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G143000_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1
pyrus_communis pycom01g23050 pycom01g23070 pycom01g23090 pycom01g23100 pycom01g23110 pycom01g23120 pycom01g23170 pycom07g26410 pycom07g26440 pycom07g26470 pycom07g26480 pycom07g26490 pycom07g26500 pycom07g26510 pycom07g26530 pycom07g26540 pycom07g26570 pycom07g26580 pycom07g26590 pycom08g20940
rosa_chinensis RchiOBHm_Chr1g0324571 RchiOBHm_Chr1g0336181 RchiOBHm_Chr1g0381061 RchiOBHm_Chr1g0381091 RchiOBHm_Chr1g0381121 RchiOBHm_Chr1g0381131 RchiOBHm_Chr1g0381141 RchiOBHm_Chr1g0381161 RchiOBHm_Chr1g0381211 RchiOBHm_Chr2g0110361 RchiOBHm_Chr2g0120231 RchiOBHm_Chr3g0486281 RchiOBHm_Chr3g0486311 RchiOBHm_Chr3g0486401 RchiOBHm_Chr4g0409511 RchiOBHm_Chr4g0409521 RchiOBHm_Chr5g0017271 RchiOBHm_Chr5g0048781 RchiOBHm_Chr5g0048811
rosa_laevigata RLG00000002401 RLG00000008559 RLG00000017798 RLG00000017799 RLG00000023082 RLG00000023088 RLG00000026230 RLG00000026238 RLG00000026240 RLG00000026241 RLG00000026242 RLG00000026243 RLG00000026244 RLG00000026246 RLG00000026247 RLG00000026248 RLG00000029876 RLG00000030189 RLG00000034579
rosa_multiflora Rmu_co8101374.1_g000001 Rmu_co8309149.1_g000001 Rmu_co8450063.1_g000001 Rmu_sc0000441.1_g000094 Rmu_sc0000479.1_g000005 Rmu_sc0000647.1_g000006 Rmu_sc0001393.1_g000031 Rmu_sc0001423.1_g000037 Rmu_sc0001616.1_g000015 Rmu_sc0001857.1_g000011 Rmu_sc0002183.1_g000013 Rmu_sc0002183.1_g000028 Rmu_sc0002183.1_g000030 Rmu_sc0002688.1_g000003 Rmu_sc0002688.1_g000020 Rmu_sc0003801.1_g000003 Rmu_sc0003801.1_g000004 Rmu_sc0004125.1_g000006 Rmu_sc0004494.1_g000005 Rmu_sc0004494.1_g000006 Rmu_sc0004494.1_g000008 Rmu_sc0004494.1_g000009 Rmu_sc0005842.1_g000004 Rmu_sc0006872.1_g000001 Rmu_sc0006872.1_g000005 Rmu_sc0006872.1_g000009 Rmu_sc0006872.1_g000010 Rmu_sc0008053.1_g000026
rosa_roxburghii Rroxscaffold_159G00432960 Rroxscaffold_1G00033060 Rroxscaffold_2G00123150 Rroxscaffold_2G00123170 Rroxscaffold_2G00133500 Rroxscaffold_2G00133550 Rroxscaffold_4G00278650 Rroxscaffold_4G00278750 Rroxscaffold_4G00278790 Rroxscaffold_4G00278800 Rroxscaffold_4G00278810 Rroxscaffold_4G00325390 Rroxscaffold_5G00354010 Rroxscaffold_6G00395890 Rroxscaffold_6G00395900 Rroxscaffold_6G00395920
rosa_rugosa Rorug01G0046900.1 Rorug01G0427000 Rorug01G0427100 Rorug01G0427200 Rorug01G0427300 Rorug01G0427400 Rorug01G0427500 Rorug01G0427500 Rorug01G0427600 Rorug01G0427600 Rorug01G0427700 Rorug01G0427700 Rorug01G0427800 Rorug01G0428700 Rorug02G0166400 Rorug02G0166500 Rorug02G0166500 Rorug02G0166600 Rorug02G0166600 Rorug02G0166700 Rorug02G0167300 Rorug02G0167300 Rorug02G0167300 Rorug03G0224600 Rorug03G0224600 Rorug04G0094400 Rorug05G0241100 Rorug05G0241200
rosa_samantha Rh1BG407700 Rh1BG407900 Rh1BG409000 Rh1CG064700 Rh1CG420900 Rh1CG421000 Rh1CG421200 Rh1CG421300 Rh1CG421800 Rh1CG421900 Rh1CG422000 Rh1CG422200 Rh1CG422300 Rh1CG423600 Rh1DG437600 Rh1DG438900 Rh1DG439000 Rh1DG440300 Rh2AG219100 Rh2CG220700 Rh2DG225300 Rh3AG274400 Rh3AG274600 Rh3CG308900 Rh3DG305800 Rh4AG156400 Rh5AG129000 Rh5AG320900 Rh5CG139600
rosa_wichuraiana Rw1G005300 Rw1G039280 Rw1G039300 Rw1G039310 Rw1G039320 Rw1G039330 Rw1G039340 Rw1G039360 Rw1G039390 Rw2G016910 Rw2G022800 Rw3G024330 Rw3G024340 Rw3G024350 Rw3G024400 Rw4G012810 Rw5G030120 Rw5G030280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 16
AccB1I GGYRCC 2 cut(s) 16, 1615
AccBSI CCGCTC 1 cut(s) 953
AccI GTMKAC 2 cut(s) 677, 1124
AccII CGCG 3 cut(s) 683, 1146, 1430
AciI CCGC 9 cut(s) 170, 313, 681, 683, 696, 953, 1460, 1601, 1604
AclWI GGATC 1 cut(s) 239
AcoI YGGCCR 1 cut(s) 1524
AcsI RAATTY 8 cut(s) 395, 427, 488, 654, 663, 760, 805, 972
AcuI CTGAAG 2 cut(s) 147, 1250
AfaI GTAC 3 cut(s) 18, 841, 1176
AfiI CCNNNNNNNGG 4 cut(s) 702, 750, 849, 1408
AgsI TTSAA 8 cut(s) 79, 190, 408, 432, 721, 1210, 1508, 1537
AjnI CCWGG 1 cut(s) 1118
AluBI AGCT 5 cut(s) 323, 389, 404, 464, 1136
AluI AGCT 5 cut(s) 323, 389, 404, 464, 1136
Alw21I GWGCWC 1 cut(s) 466
AlwI GGATC 1 cut(s) 239
Ama87I CYCGRG 1 cut(s) 459
AoxI GGCC 4 cut(s) 158, 752, 1524, 1568
ApeKI GCWGC 2 cut(s) 320, 401
ApoI RAATTY 8 cut(s) 395, 427, 488, 654, 663, 760, 805, 972
Asp700I GAANNNNTTC 1 cut(s) 1103
Asp718I GGTACC 1 cut(s) 16
AspLEI GCGC 4 cut(s) 513, 1146, 1165, 1432
AspS9I GGNCC 1 cut(s) 752
AsuHPI GGTGA 2 cut(s) 1249, 1424
AsuII TTCGAA 1 cut(s) 579
AvaI CYCGRG 1 cut(s) 459
AxyI CCTNAGG 1 cut(s) 87
BalI TGGCCA 1 cut(s) 1526
BanI GGYRCC 2 cut(s) 16, 1615
BanII GRGCYC 1 cut(s) 466
BbsI GAAGAC 1 cut(s) 1288
Bbv12I GWGCWC 1 cut(s) 466
BbvI GCAGC 2 cut(s) 332, 413
BccI CCATC 5 cut(s) 202, 1000, 1186, 1264, 1390
BcgI CGANNNNNNTGC 4 cut(s) 280, 314, 1565, 1599
BciT130I CCWGG 1 cut(s) 1120
BciVI GTATCC 3 cut(s) 415, 466, 1384
BfaI CTAG 1 cut(s) 359
BfmI CTRYAG 2 cut(s) 318, 1436
BfoI RGCGCY 1 cut(s) 514
BfuI GTATCC 3 cut(s) 415, 466, 1384
BisI GCNGC 4 cut(s) 321, 402, 1461, 1602
BlpI GCTNAGC 1 cut(s) 1184
BlsI GCNGC 4 cut(s) 322, 403, 1462, 1603
Bme1390I CCNGG 1 cut(s) 1120
BmeT110I CYCGRG 1 cut(s) 459
BmgT120I GGNCC 1 cut(s) 752
BmiI GGNNCC 3 cut(s) 18, 414, 1617
BmrFI CCNGG 1 cut(s) 1120
BmrI ACTGGG 1 cut(s) 1631
BmsI GCATC 2 cut(s) 45, 1454
BmuI ACTGGG 1 cut(s) 1631
BpiI GAAGAC 1 cut(s) 1288
BpmI CTGGAG 1 cut(s) 1115
Bpu1102I GCTNAGC 1 cut(s) 1184
Bpu14I TTCGAA 1 cut(s) 579
BpuEI CTTGAG 2 cut(s) 120, 1388
Bsa29I ATCGAT 2 cut(s) 42, 300
BsaJI CCNNGG 7 cut(s) 416, 681, 1118, 1257, 1386, 1527, 1669
BsaWI WCCGGW 1 cut(s) 1488
Bsc4I CCNNNNNNNGG 4 cut(s) 702, 750, 849, 1408
Bse118I RCCGGY 2 cut(s) 1234, 1369
Bse1I ACTGG 3 cut(s) 744, 1626, 1666
Bse21I CCTNAGG 1 cut(s) 87
BseBI CCWGG 1 cut(s) 1120
BseCI ATCGAT 2 cut(s) 42, 300
BseDI CCNNGG 7 cut(s) 416, 681, 1118, 1257, 1386, 1527, 1669
BseGI GGATG 5 cut(s) 103, 735, 1011, 1201, 1382
BseLI CCNNNNNNNGG 4 cut(s) 702, 750, 849, 1408
BseMII CTCAG 4 cut(s) 78, 479, 611, 1329
BseNI ACTGG 3 cut(s) 744, 1626, 1666
BseXI GCAGC 2 cut(s) 332, 413
Bsh1236I CGCG 3 cut(s) 683, 1146, 1430
BshFI GGCC 4 cut(s) 160, 754, 1526, 1570
BshNI GGYRCC 2 cut(s) 16, 1615
BshVI ATCGAT 2 cut(s) 42, 300
BsiHKAI GWGCWC 1 cut(s) 466
BsiHKCI CYCGRG 1 cut(s) 459
BsiSI CCGG 3 cut(s) 1235, 1370, 1489
BslI CCNNNNNNNGG 4 cut(s) 702, 750, 849, 1408
BsmI GAATGC 1 cut(s) 716
BsnI GGCC 4 cut(s) 160, 754, 1526, 1570
BsoBI CYCGRG 1 cut(s) 459
Bsp119I TTCGAA 1 cut(s) 579
Bsp1286I GDGCHC 1 cut(s) 466
Bsp143I GATC 5 cut(s) 244, 335, 1044, 1090, 1285
Bsp1720I GCTNAGC 1 cut(s) 1184
Bsp19I CCATGG 1 cut(s) 1386
BspACI CCGC 9 cut(s) 170, 313, 681, 683, 696, 953, 1460, 1601, 1604
BspANI GGCC 4 cut(s) 160, 754, 1526, 1570
BspCNI CTCAG 4 cut(s) 79, 478, 612, 1330
BspDI ATCGAT 2 cut(s) 42, 300
BspFNI CGCG 3 cut(s) 683, 1146, 1430
BspHI TCATGA 1 cut(s) 1047
BspLI GGNNCC 3 cut(s) 18, 414, 1617
BspMAI CTGCAG 2 cut(s) 322, 1440
BspPI GGATC 1 cut(s) 239
BspT104I TTCGAA 1 cut(s) 579
BspT107I GGYRCC 2 cut(s) 16, 1615
BsrBI CCGCTC 1 cut(s) 953
BsrFI RCCGGY 2 cut(s) 1234, 1369
BsrI ACTGG 3 cut(s) 744, 1626, 1666
BssAI RCCGGY 2 cut(s) 1234, 1369
BssECI CCNNGG 7 cut(s) 416, 681, 1118, 1257, 1386, 1527, 1669
BssMI GATC 5 cut(s) 244, 335, 1044, 1090, 1285
BssNAI GTATAC 2 cut(s) 678, 1125
BssT1I CCWWGG 4 cut(s) 416, 1257, 1386, 1527
Bst1107I GTATAC 2 cut(s) 678, 1125
Bst2UI CCWGG 1 cut(s) 1120
Bst4CI ACNGT 3 cut(s) 83, 166, 1670
Bst6I CTCTTC 3 cut(s) 951, 1035, 1068
BstBI TTCGAA 1 cut(s) 579
BstC8I GCNNGC 3 cut(s) 142, 800, 890
BstDEI CTNAG 6 cut(s) 87, 465, 620, 1166, 1184, 1338
BstDSI CCRYGG 3 cut(s) 681, 1386, 1669
BstENI CCTNNNNNAGG 1 cut(s) 1406
BstF5I GGATG 5 cut(s) 103, 735, 1011, 1201, 1382
BstFNI CGCG 3 cut(s) 683, 1146, 1430
BstH2I RGCGCY 1 cut(s) 514
BstHHI GCGC 4 cut(s) 513, 1146, 1165, 1432
BstKTI GATC 5 cut(s) 247, 338, 1047, 1093, 1288
BstMBI GATC 5 cut(s) 244, 335, 1044, 1090, 1285
BstMWI GCNNNNNNNGC 2 cut(s) 556, 1152
BstNI CCWGG 1 cut(s) 1120
BstSCI CCNGG 1 cut(s) 1118
BstSFI CTRYAG 2 cut(s) 318, 1436
BstUI CGCG 3 cut(s) 683, 1146, 1430
BstV1I GCAGC 2 cut(s) 332, 413
BstV2I GAAGAC 1 cut(s) 1288
BstZ17I GTATAC 2 cut(s) 678, 1125
Bsu15I ATCGAT 2 cut(s) 42, 300
Bsu36I CCTNAGG 1 cut(s) 87
BsuI GTATCC 3 cut(s) 415, 466, 1384
BsuRI GGCC 4 cut(s) 160, 754, 1526, 1570
BsuTUI ATCGAT 2 cut(s) 42, 300
BtgI CCRYGG 3 cut(s) 681, 1386, 1669
BtsCI GGATG 5 cut(s) 103, 735, 1011, 1201, 1382
BtsIMutI CAGTG 3 cut(s) 338, 1619, 1659
Cac8I GCNNGC 3 cut(s) 142, 800, 890
CciI TCATGA 1 cut(s) 1047
CfoI GCGC 4 cut(s) 513, 1146, 1165, 1432
Cfr10I RCCGGY 2 cut(s) 1234, 1369
Cfr13I GGNCC 1 cut(s) 752
Cfr42I CCGCGG 1 cut(s) 684
ClaI ATCGAT 2 cut(s) 42, 300
Csp6I GTAC 3 cut(s) 17, 840, 1175
CviQI GTAC 3 cut(s) 17, 840, 1175
DdeI CTNAG 6 cut(s) 87, 465, 620, 1166, 1184, 1338
DpnI GATC 5 cut(s) 246, 337, 1046, 1092, 1287
DpnII GATC 5 cut(s) 244, 335, 1044, 1090, 1285
EaeI YGGCCR 1 cut(s) 1524
Eam1104I CTCTTC 3 cut(s) 951, 1035, 1068
EarI CTCTTC 3 cut(s) 951, 1035, 1068
EciI GGCGGA 1 cut(s) 1619
Ecl136II GAGCTC 1 cut(s) 464
Eco130I CCWWGG 4 cut(s) 416, 1257, 1386, 1527
Eco24I GRGCYC 1 cut(s) 466
Eco53kI GAGCTC 1 cut(s) 464
Eco57I CTGAAG 2 cut(s) 147, 1250
Eco81I CCTNAGG 1 cut(s) 87
Eco88I CYCGRG 1 cut(s) 459
EcoICRI GAGCTC 1 cut(s) 464
EcoNI CCTNNNNNAGG 1 cut(s) 1406
EcoRII CCWGG 1 cut(s) 1118
EcoT14I CCWWGG 4 cut(s) 416, 1257, 1386, 1527
EcoT38I GRGCYC 1 cut(s) 466
ErhI CCWWGG 4 cut(s) 416, 1257, 1386, 1527
FblI GTMKAC 2 cut(s) 677, 1124
Fnu4HI GCNGC 4 cut(s) 321, 402, 1461, 1602
FokI GGATG 5 cut(s) 90, 722, 1018, 1208, 1369
FriOI GRGCYC 1 cut(s) 466
Fsp4HI GCNGC 4 cut(s) 321, 402, 1461, 1602
FspBI CTAG 1 cut(s) 359
GlaI GCGC 4 cut(s) 512, 1145, 1164, 1431
GluI GCNGC 4 cut(s) 321, 402, 1461, 1602
GsuI CTGGAG 1 cut(s) 1115
HaeII RGCGCY 1 cut(s) 514
HaeIII GGCC 4 cut(s) 160, 754, 1526, 1570
HapII CCGG 3 cut(s) 1235, 1370, 1489
HhaI GCGC 4 cut(s) 513, 1146, 1165, 1432
Hin6I GCGC 4 cut(s) 511, 1144, 1163, 1430
HinP1I GCGC 4 cut(s) 511, 1144, 1163, 1430
HinfI GANTC 5 cut(s) 297, 449, 616, 1099, 1415
HpaII CCGG 3 cut(s) 1235, 1370, 1489
HphI GGTGA 2 cut(s) 1249, 1424
Hpy166II GTNNAC 4 cut(s) 122, 678, 1125, 1320
Hpy188I TCNGA 6 cut(s) 335, 468, 621, 978, 1230, 1269
Hpy188III TCNNGA 7 cut(s) 86, 383, 459, 1048, 1060, 1094, 1405
Hpy8I GTNNAC 4 cut(s) 122, 678, 1125, 1320
HpyAV CCTTC 5 cut(s) 478, 931, 1030, 1301, 1402
HpyCH4III ACNGT 3 cut(s) 83, 166, 1670
HpyCH4IV ACGT 1 cut(s) 118
HpyF10VI GCNNNNNNNGC 2 cut(s) 556, 1152
HpyF3I CTNAG 6 cut(s) 87, 465, 620, 1166, 1184, 1338
HpySE526I ACGT 1 cut(s) 118
HspAI GCGC 4 cut(s) 511, 1144, 1163, 1430
KpnI GGTACC 1 cut(s) 20
KspI CCGCGG 1 cut(s) 684
Kzo9I GATC 5 cut(s) 244, 335, 1044, 1090, 1285
Lsp1109I GCAGC 2 cut(s) 332, 413
LweI GCATC 2 cut(s) 45, 1454
MaeI CTAG 1 cut(s) 359
MaeII ACGT 1 cut(s) 118
MaeIII GTNAC 5 cut(s) 52, 593, 685, 1493, 1546
MalI GATC 5 cut(s) 246, 337, 1046, 1092, 1287
MbiI CCGCTC 1 cut(s) 953
MboI GATC 5 cut(s) 244, 335, 1044, 1090, 1285
MboII GAAGA 7 cut(s) 140, 621, 968, 1052, 1085, 1106, 1288
MhlI GDGCHC 1 cut(s) 466
MlsI TGGCCA 1 cut(s) 1526
MluNI TGGCCA 1 cut(s) 1526
MmeI TCCRAC 1 cut(s) 791
MnlI CCTC 8 cut(s) 82, 581, 952, 1031, 1069, 1412, 1483, 1591
Mox20I TGGCCA 1 cut(s) 1526
MroXI GAANNNNTTC 1 cut(s) 1103
MscI TGGCCA 1 cut(s) 1526
MseI TTAA 4 cut(s) 215, 474, 708, 809
Msp20I TGGCCA 1 cut(s) 1526
MspA1I CMGCKG 1 cut(s) 683
MspI CCGG 3 cut(s) 1235, 1370, 1489
MspR9I CCNGG 1 cut(s) 1120
Mva1269I GAATGC 1 cut(s) 716
MvaI CCWGG 1 cut(s) 1120
MvnI CGCG 3 cut(s) 683, 1146, 1430
MwoI GCNNNNNNNGC 2 cut(s) 556, 1152
NcoI CCATGG 1 cut(s) 1386
NdeII GATC 5 cut(s) 244, 335, 1044, 1090, 1285
NlaIV GGNNCC 3 cut(s) 18, 414, 1617
NmuCI GTSAC 1 cut(s) 1493
NspV TTCGAA 1 cut(s) 579
PagI TCATGA 1 cut(s) 1047
PcsI WCGNNNNNNNCGW 2 cut(s) 48, 203
PctI GAATGC 1 cut(s) 716
PdmI GAANNNNTTC 1 cut(s) 1103
PfeI GAWTC 5 cut(s) 297, 449, 616, 1099, 1415
PkrI GCNGC 4 cut(s) 322, 403, 1462, 1603
Psp124BI GAGCTC 1 cut(s) 466
Psp6I CCWGG 1 cut(s) 1118
PspGI CCWGG 1 cut(s) 1118
PspN4I GGNNCC 3 cut(s) 18, 414, 1617
PspPI GGNCC 1 cut(s) 752
PstI CTGCAG 2 cut(s) 322, 1440
RsaI GTAC 3 cut(s) 18, 841, 1176
RsaNI GTAC 3 cut(s) 17, 840, 1175
SacI GAGCTC 1 cut(s) 466
SacII CCGCGG 1 cut(s) 684
SaqAI TTAA 4 cut(s) 215, 474, 708, 809
SatI GCNGC 4 cut(s) 321, 402, 1461, 1602
Sau3AI GATC 5 cut(s) 244, 335, 1044, 1090, 1285
Sau96I GGNCC 1 cut(s) 752
ScrFI CCNGG 1 cut(s) 1120
SduI GDGCHC 1 cut(s) 466
SfaNI GCATC 2 cut(s) 45, 1454
SfcI CTRYAG 2 cut(s) 318, 1436
Sfr303I CCGCGG 1 cut(s) 684
SfuI TTCGAA 1 cut(s) 579
SgrBI CCGCGG 1 cut(s) 684
SmlI CTYRAG 2 cut(s) 135, 1403
SmoI CTYRAG 2 cut(s) 135, 1403
SsiI CCGC 9 cut(s) 170, 313, 681, 683, 696, 953, 1460, 1601, 1604
SspMI CTAG 1 cut(s) 359
SstI GAGCTC 1 cut(s) 466
StyD4I CCNGG 1 cut(s) 1118
StyI CCWWGG 4 cut(s) 416, 1257, 1386, 1527
TaaI ACNGT 3 cut(s) 83, 166, 1670
TaiI ACGT 1 cut(s) 121
TaqI TCGA 8 cut(s) 42, 300, 579, 661, 1288, 1475, 1575, 1655
TauI GCSGC 2 cut(s) 1463, 1604
TfiI GAWTC 5 cut(s) 297, 449, 616, 1099, 1415
Tru1I TTAA 4 cut(s) 215, 474, 708, 809
Tru9I TTAA 4 cut(s) 215, 474, 708, 809
TscAI CASTG 3 cut(s) 345, 1626, 1666
TseFI GTSAC 1 cut(s) 1493
TseI GCWGC 2 cut(s) 320, 401
Tsp45I GTSAC 1 cut(s) 1493
TspDTI ATGAA 5 cut(s) 210, 1049, 1064, 1212, 1288
TspGWI ACGGA 2 cut(s) 127, 359
TspRI CASTG 3 cut(s) 345, 1626, 1666
XagI CCTNNNNNAGG 1 cut(s) 1406
XapI RAATTY 8 cut(s) 395, 427, 488, 654, 663, 760, 805, 972
XmiI GTMKAC 2 cut(s) 677, 1124
XmnI GAANNNNTTC 1 cut(s) 1103
XspI CTAG 1 cut(s) 359
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.