RLG00000002401

Cyclic nucleotide-gated ion channel 1-like

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
Physical Location & Seq
Forward (+)
33499652 .. 33505192
5541 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000002401

Sequence Viewer

Length: 1989 bp
ATGCCGACTAAAAGACTGGGATTACAGAAGAAGGATCATGTCTTATTATACAGGACTCAATTACCAGAAGCTAAGCCTTCAGTTACCTTATGCATCTTGTTATGCTGTGAGCTGCTCTTGTTTTCCAACAGCCAGAATTTTGTTTTGGTCGTACGTTCTCCTGCTATCTGCTTCTCGATCTACAAACTCCAGAGGACTATCTTTCAAAGACAATTATCCTATCCAACATATATGTCTAACAAGCAGGTACCCAGTGATGTCCCTAGGACAAGAATCACACGGAGAAGTACGTACAATTCAGGCAATGTTGAGGCGCAACCGCGAGATTCCTCGTGGACAGATCAAGATGCAGTTTCAATTACAAAACAAAAATTGGAAGAAACAGTTCCATTTTGGAATAAGATGTTCGTAATTGCATGTGTGCTTGCAGTCTCATTAGACCCATTATTCTTCTACATTCCAATCATCGATGAAGAAGAAAAGTGCCTTGCAGAAGACAAAGAGTTGAGGACTATAGCTCTCATTTTGCGATCGCTCACTGATGTCACTTTCGTAGTGAATATCATATATCATGTTTGCGAAGCCATTAACGCTGCCTACAAAGTGCACAAAGAAAAGAAGTCTGATGAATTGACATGGGATTGGGAATTTTCGAAGGTATCAGCAGCTGATATAATTCCATTTGCTAAATTAGTTGCTGGGAAGCTAGCATGGCGCTCCACGCTAACCAGCATTTTAGCTGTTTTTCCCATGCCACAACTGCTTCTAGTATTTGTCTTTTTCAAAATGAGAGGCCCTGGATACTTGGAGCGTAGAAAGATTCTGAATGTCTTTCTACTCGCTCAATATCTACCAAGGATCTATCGAATTTTCCTATCATCTCAGAAACTCAGACAAGATACTGGAATATGGGCTAAAGCTCTGTTTAATTTTTTTCTATATATCCTCGCAAGTCATGTCCTTGGAGCTTTTTGGTACTTCTTTTCTATTCAACGAGAAACTTCTTGTTGGCATCGGGCATGCGCAAATAATAATACAAATGTTGAAGATTGTAACTTTTACTGCCAAGGTCACAATACTACTGCAAGAAATAGTGCCACATTCCTTAATAAATTTTGCCCTATAAGTGTTGAAGAGAATGCTAAGGCCCCTTTTGATTTTGGAATATTTTTGGATTCCCTCAAAAATAATATCACAGGGGATATACATTTTGGAACGAAGTTATCTTACTCTTTTTGGTGGGGTCTGCGTAATCTAAGCTATATTTGGATTTATTATTCCTTTGTGGTGAAACAGACATTTATCTCCATGGAAACTCAAAGATGGGAGGACATAAGAAACAAGATACAATTGAAAAAGGAAGATATAGCCGGATGGATGGGCAAAAATGATCTCCCAGACGATATGAAGAAAGTAATTATGAAGAACATAGAGCAAAAACTGGAAGAGAACAAAGATACTGATCTTGAGAATCTTTTCTCTATTCTTCCAATGTCTACCAAAAAGTGTCTAAAGCGTTTCCTCGGCATGAAACTGCTAAAGAAAGTACCCAAGCTTGCAAGTATGGATGAAAGTGTGTTGAATATGATGTGTGACTATCTAAAGCCAGTGATGTATGGCGAGGGCACCGAGATTTTACAAATGGGAGTTCCAATAAATAGCATGCTACTCATTACAGAAGGCACATTATTGACCTACAAAACTACAAGTGATGATTCTACAACTGAAAATGCAAAAAGGGGTAGTATTTCAAGTTCCCCGTCAGTGGGCAACCTTGACGAAGGTGACTCTTATGGCGCCGAAGAACTGATTGAGTGGGTAATACAAAAGAAGGATTTAGGCCAGCTTCCCTGCTCTGCCTTGAATGTGAAATGCGAATCGAAAGTAGAAGGCTTTGTTCTCACGGCCAAGGACTTGATAAGTGTAGTTTCCAAATGCGAAAACTGGTGGAAAGTTGGCATTAGGAAGTCAGACCACAACACATGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

663

Amino Acids

76.12

Weight (kDa)

8.72

Isoelectric Point (pI)

46.7

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000119)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g10570 FvH4_4g36390 FvH4_7g31840 FvH4_7g31840 FvH4_7g31850 FvH4_7g31850 FvH4_7g31861 FvH4_7g31861 FvH4_7g31950
malus_domestica MD01G1054600.v1.1 MD01G1221100.v1.1 MD01G1221400.v1.1 MD01G1221600.v1.1 MD01G1221800.v1.1 MD01G1222000.v1.1 MD01G1222100.v1.1 MD07G1140800.v1.1 MD07G1291200.v1.1 MD07G1291400.v1.1 MD07G1291500.v1.1 MD07G1291700.v1.1 MD07G1292500.v1.1 MD07G1292700.v1.1 MD07G1292800.v1.1 MD07G1292900.v1.1 MD08G1241600.v1.1 MD11G1083800.v1.1 MD15G1431600.v1.1
prunus_persica Prupe.1G017800_v2.0.a1 Prupe.1G017800_v2.0.a1 Prupe.1G162800_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312700_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G143000_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1
pyrus_communis pycom01g23050 pycom01g23070 pycom01g23090 pycom01g23100 pycom01g23110 pycom01g23120 pycom01g23170 pycom07g26410 pycom07g26440 pycom07g26470 pycom07g26480 pycom07g26490 pycom07g26500 pycom07g26510 pycom07g26530 pycom07g26540 pycom07g26570 pycom07g26580 pycom07g26590 pycom08g20940
rosa_chinensis RchiOBHm_Chr1g0324571 RchiOBHm_Chr1g0336181 RchiOBHm_Chr1g0381061 RchiOBHm_Chr1g0381091 RchiOBHm_Chr1g0381121 RchiOBHm_Chr1g0381131 RchiOBHm_Chr1g0381141 RchiOBHm_Chr1g0381161 RchiOBHm_Chr1g0381211 RchiOBHm_Chr2g0110361 RchiOBHm_Chr2g0120231 RchiOBHm_Chr3g0486281 RchiOBHm_Chr3g0486311 RchiOBHm_Chr3g0486401 RchiOBHm_Chr4g0409511 RchiOBHm_Chr4g0409521 RchiOBHm_Chr5g0017271 RchiOBHm_Chr5g0048781 RchiOBHm_Chr5g0048811
rosa_laevigata RLG00000002401 RLG00000008559 RLG00000017798 RLG00000017799 RLG00000023082 RLG00000023088 RLG00000026230 RLG00000026238 RLG00000026240 RLG00000026241 RLG00000026242 RLG00000026243 RLG00000026244 RLG00000026246 RLG00000026247 RLG00000026248 RLG00000029876 RLG00000030189 RLG00000034579
rosa_multiflora Rmu_co8101374.1_g000001 Rmu_co8309149.1_g000001 Rmu_co8450063.1_g000001 Rmu_sc0000441.1_g000094 Rmu_sc0000479.1_g000005 Rmu_sc0000647.1_g000006 Rmu_sc0001393.1_g000031 Rmu_sc0001423.1_g000037 Rmu_sc0001616.1_g000015 Rmu_sc0001857.1_g000011 Rmu_sc0002183.1_g000013 Rmu_sc0002183.1_g000028 Rmu_sc0002183.1_g000030 Rmu_sc0002688.1_g000003 Rmu_sc0002688.1_g000020 Rmu_sc0003801.1_g000003 Rmu_sc0003801.1_g000004 Rmu_sc0004125.1_g000006 Rmu_sc0004494.1_g000005 Rmu_sc0004494.1_g000006 Rmu_sc0004494.1_g000008 Rmu_sc0004494.1_g000009 Rmu_sc0005842.1_g000004 Rmu_sc0006872.1_g000001 Rmu_sc0006872.1_g000005 Rmu_sc0006872.1_g000009 Rmu_sc0006872.1_g000010 Rmu_sc0008053.1_g000026
rosa_roxburghii Rroxscaffold_159G00432960 Rroxscaffold_1G00033060 Rroxscaffold_2G00123150 Rroxscaffold_2G00123170 Rroxscaffold_2G00133500 Rroxscaffold_2G00133550 Rroxscaffold_4G00278650 Rroxscaffold_4G00278750 Rroxscaffold_4G00278790 Rroxscaffold_4G00278800 Rroxscaffold_4G00278810 Rroxscaffold_4G00325390 Rroxscaffold_5G00354010 Rroxscaffold_6G00395890 Rroxscaffold_6G00395900 Rroxscaffold_6G00395920
rosa_rugosa Rorug01G0046900.1 Rorug01G0427000 Rorug01G0427100 Rorug01G0427200 Rorug01G0427300 Rorug01G0427400 Rorug01G0427500 Rorug01G0427500 Rorug01G0427600 Rorug01G0427600 Rorug01G0427700 Rorug01G0427700 Rorug01G0427800 Rorug01G0428700 Rorug02G0166400 Rorug02G0166500 Rorug02G0166500 Rorug02G0166600 Rorug02G0166600 Rorug02G0166700 Rorug02G0167300 Rorug02G0167300 Rorug02G0167300 Rorug03G0224600 Rorug03G0224600 Rorug04G0094400 Rorug05G0241100 Rorug05G0241200
rosa_samantha Rh1BG407700 Rh1BG407900 Rh1BG409000 Rh1CG064700 Rh1CG420900 Rh1CG421000 Rh1CG421200 Rh1CG421300 Rh1CG421800 Rh1CG421900 Rh1CG422000 Rh1CG422200 Rh1CG422300 Rh1CG423600 Rh1DG437600 Rh1DG438900 Rh1DG439000 Rh1DG440300 Rh2AG219100 Rh2CG220700 Rh2DG225300 Rh3AG274400 Rh3AG274600 Rh3CG308900 Rh3DG305800 Rh4AG156400 Rh5AG129000 Rh5AG320900 Rh5CG139600
rosa_wichuraiana Rw1G005300 Rw1G039280 Rw1G039300 Rw1G039310 Rw1G039320 Rw1G039330 Rw1G039340 Rw1G039360 Rw1G039390 Rw2G016910 Rw2G022800 Rw3G024330 Rw3G024340 Rw3G024350 Rw3G024400 Rw4G012810 Rw5G030120 Rw5G030280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1024
Acc36I ACCTGC 1 cut(s) 235
Acc65I GGTACC 1 cut(s) 247
AccB1I GGYRCC 3 cut(s) 247, 1625, 1796
AccI GTMKAC 1 cut(s) 1496
AccII CGCG 1 cut(s) 322
AciI CCGC 1 cut(s) 320
AclWI GGATC 2 cut(s) 42, 866
AcoI YGGCCR 1 cut(s) 1905
AcsI RAATTY 4 cut(s) 136, 647, 867, 1112
AcuI CTGAAG 1 cut(s) 63
AcyI GRCGYC 1 cut(s) 1797
AfaI GTAC 6 cut(s) 153, 249, 289, 293, 977, 1548
AfiI CCNNNNNNNGG 2 cut(s) 1765, 1766
AjnI CCWGG 1 cut(s) 796
AjuI GAANNNNNNNTTGG 2 cut(s) 128, 160
Alw21I GWGCWC 1 cut(s) 609
Alw26I GTCTC 1 cut(s) 436
Alw44I GTGCAC 1 cut(s) 605
AlwI GGATC 2 cut(s) 42, 866
AlwNI CAGNNNCTG 1 cut(s) 668
AoxI GGCC 4 cut(s) 793, 1146, 1840, 1905
ApaLI GTGCAC 1 cut(s) 605
ApeKI GCWGC 3 cut(s) 112, 593, 665
ApoI RAATTY 4 cut(s) 136, 647, 867, 1112
AsiSI GCGATCGC 1 cut(s) 533
Asp700I GAANNNNTTC 2 cut(s) 384, 1475
Asp718I GGTACC 1 cut(s) 247
AspA2I CCTAGG 1 cut(s) 263
AspLEI GCGC 4 cut(s) 316, 717, 1025, 1799
AspS9I GGNCC 2 cut(s) 794, 1147
AsuHPI GGTGA 2 cut(s) 1300, 1796
AsuII TTCGAA 1 cut(s) 653
AsuNHI GCTAGC 1 cut(s) 706
AvrII CCTAGG 1 cut(s) 263
BaeGI GKGCMC 2 cut(s) 609, 1628
BanI GGYRCC 3 cut(s) 247, 1625, 1796
BarI GAAGNNNNNNTAC 2 cut(s) 1211, 1243
BauI CACGAG 1 cut(s) 331
BbsI GAAGAC 1 cut(s) 501
Bbv12I GWGCWC 1 cut(s) 609
BbvI GCAGC 3 cut(s) 99, 580, 677
BccI CCATC 3 cut(s) 1317, 1368, 1372
BceAI ACGGC 1 cut(s) 1920
BciT130I CCWGG 1 cut(s) 798
BciVI GTATCC 1 cut(s) 794
BcoDI GTCTC 1 cut(s) 436
BfaI CTAG 4 cut(s) 264, 707, 767, 1987
BfmI CTRYAG 1 cut(s) 513
BfoI RGCGCY 2 cut(s) 718, 1800
BfuAI ACCTGC 1 cut(s) 235
BfuI GTATCC 1 cut(s) 794
BisI GCNGC 3 cut(s) 113, 594, 666
BlnI CCTAGG 1 cut(s) 263
BlpI GCTNAGC 1 cut(s) 72
BlsI GCNGC 3 cut(s) 114, 595, 667
Bme1390I CCNGG 1 cut(s) 798
BmgT120I GGNCC 2 cut(s) 794, 1147
BmiI GGNNCC 4 cut(s) 249, 1149, 1627, 1798
BmrFI CCNGG 1 cut(s) 798
BmrI ACTGGG 2 cut(s) 26, 246
BmsI GCATC 3 cut(s) 102, 337, 1021
BmtI GCTAGC 1 cut(s) 710
BmuI ACTGGG 2 cut(s) 26, 246
BpiI GAAGAC 1 cut(s) 501
BpmI CTGGAG 1 cut(s) 173
Bpu10I CCTNAGC 1 cut(s) 1143
Bpu1102I GCTNAGC 1 cut(s) 72
Bpu14I TTCGAA 1 cut(s) 653
BpuEI CTTGAG 1 cut(s) 1487
Bsa29I ATCGAT 1 cut(s) 468
BsaAI YACGTR 1 cut(s) 291
BsaBI GATNNNNATC 1 cut(s) 1461
BsaHI GRCGYC 1 cut(s) 1797
BsaJI CCNNGG 8 cut(s) 263, 796, 854, 961, 1066, 1308, 1522, 1908
Bsc4I CCNNNNNNNGG 2 cut(s) 1765, 1766
Bse1I ACTGG 6 cut(s) 21, 252, 907, 1446, 1607, 1949
Bse3DI GCAATG 1 cut(s) 310
Bse8I GATNNNNATC 1 cut(s) 1461
BseBI CCWGG 1 cut(s) 798
BseCI ATCGAT 1 cut(s) 468
BseDI CCNNGG 8 cut(s) 263, 796, 854, 961, 1066, 1308, 1522, 1908
BseGI GGATG 3 cut(s) 1379, 1383, 1573
BseJI GATNNNNATC 1 cut(s) 1461
BseLI CCNNNNNNNGG 2 cut(s) 1765, 1766
BseMI GCAATG 1 cut(s) 310
BseMII CTCAG 2 cut(s) 896, 904
BseNI ACTGG 6 cut(s) 21, 252, 907, 1446, 1607, 1949
BseSI GKGCMC 2 cut(s) 609, 1628
BseXI GCAGC 3 cut(s) 99, 580, 677
BseYI CCCAGC 1 cut(s) 698
Bsh1236I CGCG 1 cut(s) 322
Bsh1285I CGRYCG 1 cut(s) 533
BshFI GGCC 4 cut(s) 795, 1148, 1842, 1907
BshNI GGYRCC 3 cut(s) 247, 1625, 1796
BshVI ATCGAT 1 cut(s) 468
BsiEI CGRYCG 1 cut(s) 533
BsiHKAI GWGCWC 1 cut(s) 609
BsiSI CCGG 1 cut(s) 1371
BsiWI CGTACG 1 cut(s) 151
BslFI GGGAC 1 cut(s) 245
BslI CCNNNNNNNGG 2 cut(s) 1765, 1766
BsmAI GTCTC 1 cut(s) 436
BsmFI GGGAC 1 cut(s) 245
BsmI GAATGC 1 cut(s) 1144
BsnI GGCC 4 cut(s) 795, 1148, 1842, 1907
Bsp119I TTCGAA 1 cut(s) 653
Bsp1286I GDGCHC 2 cut(s) 609, 1628
Bsp143I GATC 7 cut(s) 34, 177, 340, 530, 858, 1390, 1462
Bsp1720I GCTNAGC 1 cut(s) 72
Bsp19I CCATGG 1 cut(s) 1308
BspACI CCGC 1 cut(s) 320
BspANI GGCC 4 cut(s) 795, 1148, 1842, 1907
BspCNI CTCAG 2 cut(s) 895, 903
BspDI ATCGAT 1 cut(s) 468
BspFNI CGCG 1 cut(s) 322
BspLI GGNNCC 4 cut(s) 249, 1149, 1627, 1798
BspMI ACCTGC 1 cut(s) 235
BspOI GCTAGC 1 cut(s) 710
BspPI GGATC 2 cut(s) 42, 866
BspT104I TTCGAA 1 cut(s) 653
BspT107I GGYRCC 3 cut(s) 247, 1625, 1796
BsrDI GCAATG 1 cut(s) 310
BsrI ACTGG 6 cut(s) 21, 252, 907, 1446, 1607, 1949
BssECI CCNNGG 8 cut(s) 263, 796, 854, 961, 1066, 1308, 1522, 1908
BssMI GATC 7 cut(s) 34, 177, 340, 530, 858, 1390, 1462
BssNI GRCGYC 1 cut(s) 1797
BssSI CACGAG 1 cut(s) 331
BssT1I CCWWGG 6 cut(s) 263, 854, 961, 1066, 1308, 1908
Bst2BI CACGAG 1 cut(s) 331
Bst2UI CCWGG 1 cut(s) 798
Bst4CI ACNGT 1 cut(s) 385
Bst6I CTCTTC 2 cut(s) 1128, 1440
BstACI GRCGYC 1 cut(s) 1797
BstBAI YACGTR 1 cut(s) 291
BstBI TTCGAA 1 cut(s) 653
BstC8I GCNNGC 6 cut(s) 426, 708, 1021, 1557, 1664, 1844
BstDEI CTNAG 5 cut(s) 72, 882, 890, 1143, 1256
BstDSI CCRYGG 1 cut(s) 1308
BstF5I GGATG 3 cut(s) 1379, 1383, 1573
BstFNI CGCG 1 cut(s) 322
BstH2I RGCGCY 2 cut(s) 718, 1800
BstHHI GCGC 4 cut(s) 316, 717, 1025, 1799
BstKTI GATC 7 cut(s) 37, 180, 343, 533, 861, 1393, 1465
BstMAI GTCTC 1 cut(s) 436
BstMBI GATC 7 cut(s) 34, 177, 340, 530, 858, 1390, 1462
BstMCI CGRYCG 1 cut(s) 533
BstMWI GCNNNNNNNGC 4 cut(s) 590, 712, 721, 760
BstNI CCWGG 1 cut(s) 798
BstNSI RCATGY 4 cut(s) 420, 1023, 1666, 1986
BstSCI CCNGG 1 cut(s) 796
BstSFI CTRYAG 1 cut(s) 513
BstSLI GKGCMC 2 cut(s) 609, 1628
BstSNI TACGTA 1 cut(s) 291
BstUI CGCG 1 cut(s) 322
BstV1I GCAGC 3 cut(s) 99, 580, 677
BstV2I GAAGAC 1 cut(s) 501
BstX2I RGATCY 1 cut(s) 858
BstYI RGATCY 1 cut(s) 858
Bsu15I ATCGAT 1 cut(s) 468
BsuI GTATCC 1 cut(s) 794
BsuRI GGCC 4 cut(s) 795, 1148, 1842, 1907
BsuTUI ATCGAT 1 cut(s) 468
BtgI CCRYGG 1 cut(s) 1308
BtsCI GGATG 3 cut(s) 1379, 1383, 1573
BtsIMutI CAGTG 4 cut(s) 259, 537, 1614, 1770
BveI ACCTGC 1 cut(s) 235
Cac8I GCNNGC 6 cut(s) 426, 708, 1021, 1557, 1664, 1844
CaiI CAGNNNCTG 1 cut(s) 668
CfoI GCGC 4 cut(s) 316, 717, 1025, 1799
Cfr13I GGNCC 2 cut(s) 794, 1147
ClaI ATCGAT 1 cut(s) 468
Csp6I GTAC 6 cut(s) 152, 248, 288, 292, 976, 1547
CviQI GTAC 6 cut(s) 152, 248, 288, 292, 976, 1547
DdeI CTNAG 5 cut(s) 72, 882, 890, 1143, 1256
DinI GGCGCC 1 cut(s) 1798
DpnI GATC 7 cut(s) 36, 179, 342, 532, 860, 1392, 1464
DpnII GATC 7 cut(s) 34, 177, 340, 530, 858, 1390, 1462
EaeI YGGCCR 1 cut(s) 1905
Eam1104I CTCTTC 2 cut(s) 1128, 1440
EarI CTCTTC 2 cut(s) 1128, 1440
Eco105I TACGTA 1 cut(s) 291
Eco130I CCWWGG 6 cut(s) 263, 854, 961, 1066, 1308, 1908
Eco57I CTGAAG 1 cut(s) 63
EcoO109I RGGNCCY 2 cut(s) 794, 1147
EcoRII CCWGG 1 cut(s) 796
EcoT14I CCWWGG 6 cut(s) 263, 854, 961, 1066, 1308, 1908
EcoT22I ATGCAT 1 cut(s) 95
EgeI GGCGCC 1 cut(s) 1798
EheI GGCGCC 1 cut(s) 1798
ErhI CCWWGG 6 cut(s) 263, 854, 961, 1066, 1308, 1908
FaqI GGGAC 1 cut(s) 245
FblI GTMKAC 1 cut(s) 1496
Fnu4HI GCNGC 3 cut(s) 113, 594, 666
FokI GGATG 3 cut(s) 1386, 1390, 1580
Fsp4HI GCNGC 3 cut(s) 113, 594, 666
FspBI CTAG 4 cut(s) 264, 707, 767, 1987
FspI TGCGCA 1 cut(s) 1024
GlaI GCGC 4 cut(s) 315, 716, 1024, 1798
GluI GCNGC 3 cut(s) 113, 594, 666
GsaI CCCAGC 1 cut(s) 702
GsuI CTGGAG 1 cut(s) 173
HaeII RGCGCY 2 cut(s) 718, 1800
HaeIII GGCC 4 cut(s) 795, 1148, 1842, 1907
HapII CCGG 1 cut(s) 1371
HhaI GCGC 4 cut(s) 316, 717, 1025, 1799
Hin1I GRCGYC 1 cut(s) 1797
Hin6I GCGC 4 cut(s) 314, 715, 1023, 1797
HinP1I GCGC 4 cut(s) 314, 715, 1023, 1797
HindIII AAGCTT 1 cut(s) 1553
HinfI GANTC 9 cut(s) 55, 273, 326, 820, 1175, 1471, 1715, 1787, 1877
HpaII CCGG 1 cut(s) 1371
HphI GGTGA 2 cut(s) 1300, 1796
Hpy166II GTNNAC 3 cut(s) 336, 607, 1497
Hpy188I TCNGA 5 cut(s) 625, 825, 885, 893, 1972
Hpy188III TCNNGA 4 cut(s) 175, 190, 344, 1466
Hpy8I GTNNAC 3 cut(s) 336, 607, 1497
HpyAV CCTTC 7 cut(s) 25, 87, 649, 1673, 1775, 1825, 1883
HpyCH4III ACNGT 1 cut(s) 385
HpyCH4IV ACGT 2 cut(s) 154, 290
HpyCH4V TGCA 9 cut(s) 93, 350, 416, 428, 491, 607, 1085, 1559, 1733
HpyF10VI GCNNNNNNNGC 4 cut(s) 590, 712, 721, 760
HpyF3I CTNAG 5 cut(s) 72, 882, 890, 1143, 1256
HpySE526I ACGT 2 cut(s) 154, 290
Hsp92I GRCGYC 1 cut(s) 1797
HspAI GCGC 4 cut(s) 314, 715, 1023, 1797
KasI GGCGCC 1 cut(s) 1796
KpnI GGTACC 1 cut(s) 251
Kzo9I GATC 7 cut(s) 34, 177, 340, 530, 858, 1390, 1462
LmnI GCTCC 3 cut(s) 722, 808, 965
Lsp1109I GCAGC 3 cut(s) 99, 580, 677
LweI GCATC 3 cut(s) 102, 337, 1021
MaeI CTAG 4 cut(s) 264, 707, 767, 1987
MaeII ACGT 2 cut(s) 154, 290
MaeIII GTNAC 6 cut(s) 82, 544, 1052, 1070, 1592, 1784
MalI GATC 7 cut(s) 36, 179, 342, 532, 860, 1392, 1464
MboI GATC 7 cut(s) 34, 177, 340, 530, 858, 1390, 1462
MfeI CAATTG 1 cut(s) 1349
MflI RGATCY 1 cut(s) 858
MhlI GDGCHC 2 cut(s) 609, 1628
Mly113I GGCGCC 1 cut(s) 1797
MlyI GAGTC 2 cut(s) 49, 1781
MmeI TCCRAC 2 cut(s) 150, 248
Mph1103I ATGCAT 1 cut(s) 95
MroXI GAANNNNTTC 2 cut(s) 384, 1475
MseI TTAA 3 cut(s) 588, 927, 1107
MspA1I CMGCKG 1 cut(s) 668
MspI CCGG 1 cut(s) 1371
MspR9I CCNGG 1 cut(s) 798
MunI CAATTG 1 cut(s) 1349
Mva1269I GAATGC 1 cut(s) 1144
MvaI CCWGG 1 cut(s) 798
MvnI CGCG 1 cut(s) 322
MwoI GCNNNNNNNGC 4 cut(s) 590, 712, 721, 760
NarI GGCGCC 1 cut(s) 1797
NcoI CCATGG 1 cut(s) 1308
NdeII GATC 7 cut(s) 34, 177, 340, 530, 858, 1390, 1462
NheI GCTAGC 1 cut(s) 706
NlaIV GGNNCC 4 cut(s) 249, 1149, 1627, 1798
NmeAIII GCCGAG 1 cut(s) 1503
NmuCI GTSAC 4 cut(s) 544, 1070, 1592, 1784
NsbI TGCGCA 1 cut(s) 1024
NsiI ATGCAT 1 cut(s) 95
NspI RCATGY 4 cut(s) 420, 1023, 1666, 1986
NspV TTCGAA 1 cut(s) 653
PaeI GCATGC 2 cut(s) 1023, 1666
PctI GAATGC 1 cut(s) 1144
PdmI GAANNNNTTC 2 cut(s) 384, 1475
PfeI GAWTC 7 cut(s) 273, 326, 820, 1175, 1471, 1715, 1877
Pfl23II CGTACG 1 cut(s) 151
PkrI GCNGC 3 cut(s) 114, 595, 667
Ple19I CGATCG 1 cut(s) 533
PleI GAGTC 2 cut(s) 49, 1781
PluTI GGCGCC 1 cut(s) 1800
PpsI GAGTC 2 cut(s) 49, 1781
Ppu21I YACGTR 1 cut(s) 291
Psp6I CCWGG 1 cut(s) 796
PspFI CCCAGC 1 cut(s) 698
PspGI CCWGG 1 cut(s) 796
PspLI CGTACG 1 cut(s) 151
PspN4I GGNNCC 4 cut(s) 249, 1149, 1627, 1798
PspPI GGNCC 2 cut(s) 794, 1147
PsrI GAACNNNNNNTAC 2 cut(s) 1738, 1770
PstNI CAGNNNCTG 1 cut(s) 668
PsuI RGATCY 1 cut(s) 858
PvuI CGATCG 1 cut(s) 533
PvuII CAGCTG 1 cut(s) 668
RgaI GCGATCGC 1 cut(s) 533
RsaI GTAC 6 cut(s) 153, 249, 289, 293, 977, 1548
RsaNI GTAC 6 cut(s) 152, 248, 288, 292, 976, 1547
SaqAI TTAA 3 cut(s) 588, 927, 1107
SatI GCNGC 3 cut(s) 113, 594, 666
Sau3AI GATC 7 cut(s) 34, 177, 340, 530, 858, 1390, 1462
Sau96I GGNCC 2 cut(s) 794, 1147
SchI GAGTC 2 cut(s) 49, 1781
ScrFI CCNGG 1 cut(s) 798
SduI GDGCHC 2 cut(s) 609, 1628
SfaAI GCGATCGC 1 cut(s) 533
SfaNI GCATC 3 cut(s) 102, 337, 1021
SfcI CTRYAG 1 cut(s) 513
SfoI GGCGCC 1 cut(s) 1798
SfuI TTCGAA 1 cut(s) 653
SgfI GCGATCGC 1 cut(s) 533
SmlI CTYRAG 1 cut(s) 1466
SmoI CTYRAG 1 cut(s) 1466
SnaBI TACGTA 1 cut(s) 291
SphI GCATGC 2 cut(s) 1023, 1666
SsiI CCGC 1 cut(s) 320
SspDI GGCGCC 1 cut(s) 1796
SspI AATATT 1 cut(s) 1167
SspMI CTAG 4 cut(s) 264, 707, 767, 1987
StyD4I CCNGG 1 cut(s) 796
StyI CCWWGG 6 cut(s) 263, 854, 961, 1066, 1308, 1908
TaaI ACNGT 1 cut(s) 385
TaiI ACGT 2 cut(s) 157, 293
TaqI TCGA 5 cut(s) 176, 468, 653, 865, 1880
TfiI GAWTC 7 cut(s) 273, 326, 820, 1175, 1471, 1715, 1877
Tru1I TTAA 3 cut(s) 588, 927, 1107
Tru9I TTAA 3 cut(s) 588, 927, 1107
TscAI CASTG 4 cut(s) 259, 544, 1614, 1770
TseFI GTSAC 4 cut(s) 544, 1070, 1592, 1784
TseI GCWGC 3 cut(s) 112, 593, 665
Tsp45I GTSAC 4 cut(s) 544, 1070, 1592, 1784
TspDTI ATGAA 6 cut(s) 486, 642, 1421, 1436, 1544, 1584
TspGWI ACGGA 1 cut(s) 295
TspRI CASTG 4 cut(s) 259, 544, 1614, 1770
VneI GTGCAC 1 cut(s) 605
XapI RAATTY 4 cut(s) 136, 647, 867, 1112
XceI RCATGY 4 cut(s) 420, 1023, 1666, 1986
XmaJI CCTAGG 1 cut(s) 263
XmiI GTMKAC 1 cut(s) 1496
XmnI GAANNNNTTC 2 cut(s) 384, 1475
XspI CTAG 4 cut(s) 264, 707, 767, 1987
Zsp2I ATGCAT 1 cut(s) 95
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.