Prupe.4G092800_v2.0.a1

Cyclic nucleotide-gated ion channel 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
OG0000119
Physical Location & Seq
Reverse (-)
4658153 .. 4662306
4154 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G092800.2

Sequence Viewer

Length: 1794 bp
ATGTCTCTACAGCCCCGTGTTCATCATCTGACCAAAATCATAAGCGACGCACCAAGTAAACTGGCACGATGTCTCCCATCCAAAGTTAGAGAACTTTTAACAAAGAAATGGGAAAGCAAACTTCTTTCAGCTTCAGTCTGGAACAAGATAATTGTAATTTCATGTGCTATTGCAATTTCCCTAGATCCCTTGTTCTTATACATTCCATTCATCGATGAGAAAAAGAAATGCCTTGGAATGGACAAAAAGTTGTGGAATGTGGCTCTGATTTTGCGATCTCTAACGGATATCACTTTCTTGGTGGATATTGGATATAAAATCTATGAAGGGATTAATAAAGCCTACAAGGAGATCAACCAAGGGAAGGAGCAATGGGAATTGGATTGGCAAACGACGTTAATAAGAAGACATGAGATAATTCCATTTGCTAAGAAAATAGCTTGGGAGTTGAAGTGGTGTTGTTTGGTGACTGACCTTCTCTCTGTTTTTCCCATGCCACAACTTCTAGTAAAAGGTTTTTTCAAAATGTGGTCGGGATATTCAAAACCGAGAAAGGCTGTCAACTTTTTTCTTCTCAGCCAGTATCTGCCAAGAATTTATCGAATTATTTTATCTTCTACCGAACTTACAAGGACCATCGGAATATGGTTGAAAGCCCTATTTAATTTGTTTTTATACATTATTGCTAGTCATGTTATTGGAGCTTTTTGGTACTTCTTTTCCATTCAACGAGAGACCTCCTGTTGGCACCAGGCTTGTCAAAATCACACAGAAATTGAGGGATGCATGGGTACCTTTTCTTGTGATCATCACAATACTTCTACACCAAATATCACATTTTTTGATGAACATTGCAAAATAGATGTTCCGGACAATGCTGCGGCATTTAATTATGGAATATTTCTTGATTCCCTCAAGTCTGGTAATGCGGAGCATATAAATTTTCCAACAAAGTTATGCTACTCTTTCTGGTGGGGTCTGAGAAATTTGAGCAACTTTGGCACGAATCTCGCAACAAGTAATTATGTGTGGGAAAACTTGTTTGCAATTCTAATTTCTGTCACTGGCTTGCTATTATTTATATATCTCATTGGAAATATTCAGACATTCATTCAGATGAGAACCACACAATCGGAGGAAATTAGGAAGAAGATTGAATTAAAAAAAGGAGATATAGACGAGTGGATGAAGAAATATCATATTGATGATGGAAAGAAGGATGAAATCATGAAAAACATAAATAAAAAATTGGAAGAGGACAAAGATGCTGAGCTGGAGAATCTATTCAATGTTCTTCCCGGTTATATGAAAAAATATCTAAAGCATCTTCTTTGCTTCAAAACTCTATCACAAGTTGGACTCCTTAAACTTATGAATGACAATGTGCTGAAAACGATGTGCGACTATATGACGCCAGTGACGTACGCAGCAGGTCACATGATATTTTCAGTGAATGACCCAATTGATCGCATGCTTCTCATTATAGAAGGAAAAGCATTCAACTACCGCACAACTCCTAATTCTAGCTTTGCACATGGTGAAGAAACAACAGAAAATTCTGGTGCTGCCCCAGTTCCATCCCCAGAGGAGGACAAGGGACTTGGAAAAGTTGTTTATGGAGAAAACCTTCTGATCTGGGCATCCGCCAACAAACCTCGGTTTGAGGATCTTCCTCTCGGGACCGAAAATGTGAAATGTCATACAAAAGTAGAAGGTTTTGCTCTCTCAGCCCAGGACTTGCTAAAGGTTGTCTCCAAACGCGAACAGTCGTGGAAGTTATACTTTGGACATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
Ion_trans

Protein Analysis

598

Amino Acids

68.86

Weight (kDa)

8.69

Isoelectric Point (pI)

38.53

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000119)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g10570 FvH4_4g36390 FvH4_7g31840 FvH4_7g31840 FvH4_7g31850 FvH4_7g31850 FvH4_7g31861 FvH4_7g31861 FvH4_7g31950
malus_domestica MD01G1054600.v1.1 MD01G1221100.v1.1 MD01G1221400.v1.1 MD01G1221600.v1.1 MD01G1221800.v1.1 MD01G1222000.v1.1 MD01G1222100.v1.1 MD07G1140800.v1.1 MD07G1291200.v1.1 MD07G1291400.v1.1 MD07G1291500.v1.1 MD07G1291700.v1.1 MD07G1292500.v1.1 MD07G1292700.v1.1 MD07G1292800.v1.1 MD07G1292900.v1.1 MD08G1241600.v1.1 MD11G1083800.v1.1 MD15G1431600.v1.1
prunus_persica Prupe.1G017800_v2.0.a1 Prupe.1G017800_v2.0.a1 Prupe.1G162800_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312700_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G143000_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1
pyrus_communis pycom01g23050 pycom01g23070 pycom01g23090 pycom01g23100 pycom01g23110 pycom01g23120 pycom01g23170 pycom07g26410 pycom07g26440 pycom07g26470 pycom07g26480 pycom07g26490 pycom07g26500 pycom07g26510 pycom07g26530 pycom07g26540 pycom07g26570 pycom07g26580 pycom07g26590 pycom08g20940
rosa_chinensis RchiOBHm_Chr1g0324571 RchiOBHm_Chr1g0336181 RchiOBHm_Chr1g0381061 RchiOBHm_Chr1g0381091 RchiOBHm_Chr1g0381121 RchiOBHm_Chr1g0381131 RchiOBHm_Chr1g0381141 RchiOBHm_Chr1g0381161 RchiOBHm_Chr1g0381211 RchiOBHm_Chr2g0110361 RchiOBHm_Chr2g0120231 RchiOBHm_Chr3g0486281 RchiOBHm_Chr3g0486311 RchiOBHm_Chr3g0486401 RchiOBHm_Chr4g0409511 RchiOBHm_Chr4g0409521 RchiOBHm_Chr5g0017271 RchiOBHm_Chr5g0048781 RchiOBHm_Chr5g0048811
rosa_laevigata RLG00000002401 RLG00000008559 RLG00000017798 RLG00000017799 RLG00000023082 RLG00000023088 RLG00000026230 RLG00000026238 RLG00000026240 RLG00000026241 RLG00000026242 RLG00000026243 RLG00000026244 RLG00000026246 RLG00000026247 RLG00000026248 RLG00000029876 RLG00000030189 RLG00000034579
rosa_multiflora Rmu_co8101374.1_g000001 Rmu_co8309149.1_g000001 Rmu_co8450063.1_g000001 Rmu_sc0000441.1_g000094 Rmu_sc0000479.1_g000005 Rmu_sc0000647.1_g000006 Rmu_sc0001393.1_g000031 Rmu_sc0001423.1_g000037 Rmu_sc0001616.1_g000015 Rmu_sc0001857.1_g000011 Rmu_sc0002183.1_g000013 Rmu_sc0002183.1_g000028 Rmu_sc0002183.1_g000030 Rmu_sc0002688.1_g000003 Rmu_sc0002688.1_g000020 Rmu_sc0003801.1_g000003 Rmu_sc0003801.1_g000004 Rmu_sc0004125.1_g000006 Rmu_sc0004494.1_g000005 Rmu_sc0004494.1_g000006 Rmu_sc0004494.1_g000008 Rmu_sc0004494.1_g000009 Rmu_sc0005842.1_g000004 Rmu_sc0006872.1_g000001 Rmu_sc0006872.1_g000005 Rmu_sc0006872.1_g000009 Rmu_sc0006872.1_g000010 Rmu_sc0008053.1_g000026
rosa_roxburghii Rroxscaffold_159G00432960 Rroxscaffold_1G00033060 Rroxscaffold_2G00123150 Rroxscaffold_2G00123170 Rroxscaffold_2G00133500 Rroxscaffold_2G00133550 Rroxscaffold_4G00278650 Rroxscaffold_4G00278750 Rroxscaffold_4G00278790 Rroxscaffold_4G00278800 Rroxscaffold_4G00278810 Rroxscaffold_4G00325390 Rroxscaffold_5G00354010 Rroxscaffold_6G00395890 Rroxscaffold_6G00395900 Rroxscaffold_6G00395920
rosa_rugosa Rorug01G0046900.1 Rorug01G0427000 Rorug01G0427100 Rorug01G0427200 Rorug01G0427300 Rorug01G0427400 Rorug01G0427500 Rorug01G0427500 Rorug01G0427600 Rorug01G0427600 Rorug01G0427700 Rorug01G0427700 Rorug01G0427800 Rorug01G0428700 Rorug02G0166400 Rorug02G0166500 Rorug02G0166500 Rorug02G0166600 Rorug02G0166600 Rorug02G0166700 Rorug02G0167300 Rorug02G0167300 Rorug02G0167300 Rorug03G0224600 Rorug03G0224600 Rorug04G0094400 Rorug05G0241100 Rorug05G0241200
rosa_samantha Rh1BG407700 Rh1BG407900 Rh1BG409000 Rh1CG064700 Rh1CG420900 Rh1CG421000 Rh1CG421200 Rh1CG421300 Rh1CG421800 Rh1CG421900 Rh1CG422000 Rh1CG422200 Rh1CG422300 Rh1CG423600 Rh1DG437600 Rh1DG438900 Rh1DG439000 Rh1DG440300 Rh2AG219100 Rh2CG220700 Rh2DG225300 Rh3AG274400 Rh3AG274600 Rh3CG308900 Rh3DG305800 Rh4AG156400 Rh5AG129000 Rh5AG320900 Rh5CG139600
rosa_wichuraiana Rw1G005300 Rw1G039280 Rw1G039300 Rw1G039310 Rw1G039320 Rw1G039330 Rw1G039340 Rw1G039360 Rw1G039390 Rw2G016910 Rw2G022800 Rw3G024330 Rw3G024340 Rw3G024350 Rw3G024400 Rw4G012810 Rw5G030120 Rw5G030280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1421
Acc65I GGTACC 1 cut(s) 791
AccB1I GGYRCC 2 cut(s) 747, 791
AccII CGCG 1 cut(s) 1761
AccIII TCCGGA 1 cut(s) 868
AciI CCGC 4 cut(s) 881, 929, 1507, 1644
AclWI GGATC 2 cut(s) 179, 1674
AcsI RAATTY 4 cut(s) 594, 940, 985, 1555
AcuI CTGAAG 1 cut(s) 117
AcyI GRCGYC 1 cut(s) 1412
AdeI CACNNNGTG 1 cut(s) 1538
AfaI GTAC 3 cut(s) 713, 793, 1424
AfiI CCNNNNNNNGG 4 cut(s) 238, 364, 744, 1588
AgsI TTSAA 9 cut(s) 451, 523, 543, 652, 728, 1157, 1288, 1339, 1501
AjnI CCWGG 2 cut(s) 750, 1731
AluBI AGCT 5 cut(s) 131, 440, 704, 1273, 1527
AluI AGCT 5 cut(s) 131, 440, 704, 1273, 1527
Alw26I GTCTC 4 cut(s) 9, 77, 728, 1756
AlwI GGATC 2 cut(s) 179, 1674
AlwNI CAGNNNCTG 1 cut(s) 586
Ama87I CYCGRG 1 cut(s) 1676
Aor13HI TCCGGA 1 cut(s) 868
ApeKI GCWGC 3 cut(s) 878, 1427, 1565
ApoI RAATTY 4 cut(s) 594, 940, 985, 1555
AseI ATTAAT 1 cut(s) 333
Asp700I GAANNNNTTC 2 cut(s) 1283, 1626
Asp718I GGTACC 1 cut(s) 791
AspS9I GGNCC 2 cut(s) 633, 1680
AsuC2I CCSGG 1 cut(s) 1299
AsuHPI GGTGA 2 cut(s) 478, 1550
AvaI CYCGRG 1 cut(s) 1676
AvaII GGWCC 2 cut(s) 633, 1680
BanI GGYRCC 2 cut(s) 747, 791
BbsI GAAGAC 1 cut(s) 412
BbvI GCAGC 3 cut(s) 865, 1439, 1552
BccI CCATC 4 cut(s) 85, 644, 1202, 1585
BcgI CGANNNNNNTGC 2 cut(s) 991, 1025
BciT130I CCWGG 2 cut(s) 752, 1733
BclI TGATCA 1 cut(s) 805
BcnI CCSGG 1 cut(s) 1299
BcoDI GTCTC 4 cut(s) 9, 77, 728, 1756
BfaI CTAG 4 cut(s) 182, 506, 687, 1524
BfmI CTRYAG 1 cut(s) 8
BfuAI ACCTGC 1 cut(s) 1421
BisI GCNGC 4 cut(s) 879, 882, 1428, 1566
BlpI GCTNAGC 1 cut(s) 1269
BlsI GCNGC 4 cut(s) 880, 883, 1429, 1567
Bme1390I CCNGG 3 cut(s) 752, 1299, 1733
Bme18I GGWCC 2 cut(s) 633, 1680
BmeT110I CYCGRG 1 cut(s) 1676
BmgT120I GGNCC 2 cut(s) 633, 1680
BmiI GGNNCC 3 cut(s) 749, 793, 1681
BmrFI CCNGG 3 cut(s) 752, 1299, 1733
BmrI ACTGGG 1 cut(s) 1565
BmsI GCATC 4 cut(s) 773, 1255, 1333, 1649
BmuI ACTGGG 1 cut(s) 1565
BpiI GAAGAC 1 cut(s) 412
BpmI CTGGAG 1 cut(s) 1295
Bpu1102I GCTNAGC 1 cut(s) 1269
BpuEI CTTGAG 1 cut(s) 899
BpuMI CCSGG 1 cut(s) 1299
Bsa29I ATCGAT 1 cut(s) 213
BsaHI GRCGYC 1 cut(s) 1412
BsaI GGTCTC 1 cut(s) 728
BsaJI CCNNGG 4 cut(s) 232, 358, 1655, 1731
BsaWI WCCGGW 1 cut(s) 868
BsaXI ACNNNNNCTCC 4 cut(s) 57, 87, 437, 467
Bsc4I CCNNNNNNNGG 4 cut(s) 238, 364, 744, 1588
Bse1I ACTGG 5 cut(s) 66, 580, 1069, 1415, 1571
Bse3DI GCAATG 2 cut(s) 377, 850
BseAI TCCGGA 1 cut(s) 868
BseBI CCWGG 2 cut(s) 752, 1733
BseCI ATCGAT 1 cut(s) 213
BseDI CCNNGG 4 cut(s) 232, 358, 1655, 1731
BseGI GGATG 6 cut(s) 77, 788, 1191, 1225, 1577, 1640
BseLI CCNNNNNNNGG 4 cut(s) 238, 364, 744, 1588
BseMI GCAATG 2 cut(s) 377, 850
BseMII CTCAG 4 cut(s) 589, 971, 1260, 1740
BseNI ACTGG 5 cut(s) 66, 580, 1069, 1415, 1571
BseRI GAGGAG 1 cut(s) 1601
BseXI GCAGC 3 cut(s) 865, 1439, 1552
Bsh1236I CGCG 1 cut(s) 1761
BshNI GGYRCC 2 cut(s) 747, 791
BshVI ATCGAT 1 cut(s) 213
BsiHKCI CYCGRG 1 cut(s) 1676
BsiSI CCGG 2 cut(s) 869, 1299
BsiWI CGTACG 1 cut(s) 1422
BslFI GGGAC 2 cut(s) 1611, 1693
BslI CCNNNNNNNGG 4 cut(s) 238, 364, 744, 1588
BsmAI GTCTC 4 cut(s) 9, 77, 728, 1756
BsmFI GGGAC 2 cut(s) 1611, 1693
BsmI GAATGC 1 cut(s) 1496
Bso31I GGTCTC 1 cut(s) 728
BsoBI CYCGRG 1 cut(s) 1676
Bsp13I TCCGGA 1 cut(s) 868
Bsp143I GATC 7 cut(s) 184, 275, 351, 805, 1465, 1632, 1666
Bsp1720I GCTNAGC 1 cut(s) 1269
BspACI CCGC 4 cut(s) 881, 929, 1507, 1644
BspCNI CTCAG 4 cut(s) 588, 972, 1261, 1739
BspDI ATCGAT 1 cut(s) 213
BspEI TCCGGA 1 cut(s) 868
BspFNI CGCG 1 cut(s) 1761
BspHI TCATGA 1 cut(s) 1227
BspLI GGNNCC 3 cut(s) 749, 793, 1681
BspMI ACCTGC 1 cut(s) 1421
BspPI GGATC 2 cut(s) 179, 1674
BspT107I GGYRCC 2 cut(s) 747, 791
BspTNI GGTCTC 1 cut(s) 728
BsrDI GCAATG 2 cut(s) 377, 850
BsrI ACTGG 5 cut(s) 66, 580, 1069, 1415, 1571
BssECI CCNNGG 4 cut(s) 232, 358, 1655, 1731
BssMI GATC 7 cut(s) 184, 275, 351, 805, 1465, 1632, 1666
BssNI GRCGYC 1 cut(s) 1412
BssT1I CCWWGG 2 cut(s) 232, 358
Bst2UI CCWGG 2 cut(s) 752, 1733
Bst4CI ACNGT 1 cut(s) 1767
Bst6I CTCTTC 1 cut(s) 1248
BstACI GRCGYC 1 cut(s) 1412
BstC8I GCNNGC 2 cut(s) 1070, 1472
BstDEI CTNAG 5 cut(s) 429, 575, 980, 1269, 1726
BstF5I GGATG 6 cut(s) 77, 788, 1191, 1225, 1577, 1640
BstFNI CGCG 1 cut(s) 1761
BstKTI GATC 7 cut(s) 187, 278, 354, 808, 1468, 1635, 1669
BstMAI GTCTC 4 cut(s) 9, 77, 728, 1756
BstMBI GATC 7 cut(s) 184, 275, 351, 805, 1465, 1632, 1666
BstMWI GCNNNNNNNGC 2 cut(s) 999, 1727
BstNI CCWGG 2 cut(s) 752, 1733
BstNSI RCATGY 1 cut(s) 1474
BstSCI CCNGG 3 cut(s) 750, 1297, 1731
BstSFI CTRYAG 1 cut(s) 8
BstUI CGCG 1 cut(s) 1761
BstV1I GCAGC 3 cut(s) 865, 1439, 1552
BstV2I GAAGAC 1 cut(s) 412
BstX2I RGATCY 2 cut(s) 184, 1666
BstYI RGATCY 2 cut(s) 184, 1666
Bsu15I ATCGAT 1 cut(s) 213
BsuTUI ATCGAT 1 cut(s) 213
BtsCI GGATG 6 cut(s) 77, 788, 1191, 1225, 1577, 1640
BtsIMutI CAGTG 3 cut(s) 1062, 1422, 1455
BveI ACCTGC 1 cut(s) 1421
Cac8I GCNNGC 2 cut(s) 1070, 1472
CaiI CAGNNNCTG 1 cut(s) 586
CciI TCATGA 1 cut(s) 1227
Cfr13I GGNCC 2 cut(s) 633, 1680
ClaI ATCGAT 1 cut(s) 213
CseI GACGC 2 cut(s) 56, 1420
Csp6I GTAC 3 cut(s) 712, 792, 1423
CviAII CATG 9 cut(s) 162, 410, 493, 692, 787, 1228, 1438, 1471, 1535
CviQI GTAC 3 cut(s) 712, 792, 1423
DdeI CTNAG 5 cut(s) 429, 575, 980, 1269, 1726
DpnI GATC 7 cut(s) 186, 277, 353, 807, 1467, 1634, 1668
DpnII GATC 7 cut(s) 184, 275, 351, 805, 1465, 1632, 1666
DraIII CACNNNGTG 1 cut(s) 1538
Eam1104I CTCTTC 1 cut(s) 1248
EarI CTCTTC 1 cut(s) 1248
EciI GGCGGA 1 cut(s) 1633
Eco130I CCWWGG 2 cut(s) 232, 358
Eco31I GGTCTC 1 cut(s) 728
Eco32I GATATC 1 cut(s) 289
Eco47I GGWCC 2 cut(s) 633, 1680
Eco57I CTGAAG 1 cut(s) 117
Eco88I CYCGRG 1 cut(s) 1676
EcoRII CCWGG 2 cut(s) 750, 1731
EcoRV GATATC 1 cut(s) 289
EcoT14I CCWWGG 2 cut(s) 232, 358
EcoT22I ATGCAT 1 cut(s) 788
ErhI CCWWGG 2 cut(s) 232, 358
FaeI CATG 9 cut(s) 165, 413, 496, 695, 790, 1231, 1441, 1474, 1538
FalI AAGNNNNNCTT 1 cut(s) 1766
FaqI GGGAC 2 cut(s) 1611, 1693
FatI CATG 9 cut(s) 161, 409, 492, 691, 786, 1227, 1437, 1470, 1534
FbaI TGATCA 1 cut(s) 805
Fnu4HI GCNGC 4 cut(s) 879, 882, 1428, 1566
FokI GGATG 6 cut(s) 64, 795, 1198, 1232, 1564, 1627
Fsp4HI GCNGC 4 cut(s) 879, 882, 1428, 1566
FspBI CTAG 4 cut(s) 182, 506, 687, 1524
GluI GCNGC 4 cut(s) 879, 882, 1428, 1566
GsuI CTGGAG 1 cut(s) 1295
HapII CCGG 2 cut(s) 869, 1299
HgaI GACGC 2 cut(s) 56, 1420
Hin1I GRCGYC 1 cut(s) 1412
Hin1II CATG 9 cut(s) 165, 413, 496, 695, 790, 1231, 1441, 1474, 1538
HincII GTYRAC 1 cut(s) 562
HindII GTYRAC 1 cut(s) 562
HinfI GANTC 4 cut(s) 908, 1006, 1279, 1359
HpaII CCGG 2 cut(s) 869, 1299
HphI GGTGA 2 cut(s) 478, 1550
Hpy166II GTNNAC 2 cut(s) 59, 562
Hpy188I TCNGA 8 cut(s) 30, 267, 641, 981, 1104, 1116, 1135, 1632
Hpy188III TCNNGA 6 cut(s) 139, 534, 869, 905, 1228, 1678
Hpy8I GTNNAC 2 cut(s) 59, 562
Hpy99I CGWCG 2 cut(s) 50, 397
HpyAV CCTTC 7 cut(s) 320, 358, 485, 1210, 1481, 1637, 1706
HpyCH4III ACNGT 1 cut(s) 1767
HpyCH4IV ACGT 2 cut(s) 395, 1421
HpyCH4V TGCA 5 cut(s) 173, 786, 855, 1046, 1532
HpyF10VI GCNNNNNNNGC 2 cut(s) 999, 1727
HpyF3I CTNAG 5 cut(s) 429, 575, 980, 1269, 1726
HpySE526I ACGT 2 cut(s) 395, 1421
Hsp92I GRCGYC 1 cut(s) 1412
Hsp92II CATG 9 cut(s) 165, 413, 496, 695, 790, 1231, 1441, 1474, 1538
Kpn2I TCCGGA 1 cut(s) 868
KpnI GGTACC 1 cut(s) 795
Ksp22I TGATCA 1 cut(s) 805
Kzo9I GATC 7 cut(s) 184, 275, 351, 805, 1465, 1632, 1666
LmnI GCTCC 3 cut(s) 367, 701, 931
Lsp1109I GCAGC 3 cut(s) 865, 1439, 1552
LweI GCATC 4 cut(s) 773, 1255, 1333, 1649
MaeI CTAG 4 cut(s) 182, 506, 687, 1524
MaeII ACGT 2 cut(s) 395, 1421
MaeIII GTNAC 4 cut(s) 466, 1060, 1417, 1433
MalI GATC 7 cut(s) 186, 277, 353, 807, 1467, 1634, 1668
MboI GATC 7 cut(s) 184, 275, 351, 805, 1465, 1632, 1666
MfeI CAATTG 1 cut(s) 1461
MflI RGATCY 2 cut(s) 184, 1666
MlyI GAGTC 1 cut(s) 1353
MmeI TCCRAC 2 cut(s) 971, 1336
Mph1103I ATGCAT 1 cut(s) 788
MroI TCCGGA 1 cut(s) 868
MroXI GAANNNNTTC 2 cut(s) 1283, 1626
MseI TTAA 7 cut(s) 98, 333, 398, 663, 888, 1160, 1365
MslI CAYNNNNRTG 2 cut(s) 1115, 1203
MspI CCGG 2 cut(s) 869, 1299
MspR9I CCNGG 3 cut(s) 752, 1299, 1733
MunI CAATTG 1 cut(s) 1461
Mva1269I GAATGC 1 cut(s) 1496
MvaI CCWGG 2 cut(s) 752, 1733
MvnI CGCG 1 cut(s) 1761
MwoI GCNNNNNNNGC 2 cut(s) 999, 1727
NciI CCSGG 1 cut(s) 1299
NdeII GATC 7 cut(s) 184, 275, 351, 805, 1465, 1632, 1666
NlaIII CATG 9 cut(s) 165, 413, 496, 695, 790, 1231, 1441, 1474, 1538
NlaIV GGNNCC 3 cut(s) 749, 793, 1681
NmuCI GTSAC 4 cut(s) 466, 1060, 1417, 1433
NsiI ATGCAT 1 cut(s) 788
NspI RCATGY 1 cut(s) 1474
PaeI GCATGC 1 cut(s) 1474
PagI TCATGA 1 cut(s) 1227
PcsI WCGNNNNNNNCGW 1 cut(s) 1418
PctI GAATGC 1 cut(s) 1496
PdmI GAANNNNTTC 2 cut(s) 1283, 1626
PfeI GAWTC 3 cut(s) 908, 1006, 1279
Pfl23II CGTACG 1 cut(s) 1422
PkrI GCNGC 4 cut(s) 880, 883, 1429, 1567
PleI GAGTC 1 cut(s) 1353
PpsI GAGTC 1 cut(s) 1353
PshBI ATTAAT 1 cut(s) 333
Psp6I CCWGG 2 cut(s) 750, 1731
PspGI CCWGG 2 cut(s) 750, 1731
PspLI CGTACG 1 cut(s) 1422
PspN4I GGNNCC 3 cut(s) 749, 793, 1681
PspPI GGNCC 2 cut(s) 633, 1680
PstNI CAGNNNCTG 1 cut(s) 586
PsuI RGATCY 2 cut(s) 184, 1666
RsaI GTAC 3 cut(s) 713, 793, 1424
RsaNI GTAC 3 cut(s) 712, 792, 1423
RseI CAYNNNNRTG 2 cut(s) 1115, 1203
SaqAI TTAA 7 cut(s) 98, 333, 398, 663, 888, 1160, 1365
SatI GCNGC 4 cut(s) 879, 882, 1428, 1566
Sau3AI GATC 7 cut(s) 184, 275, 351, 805, 1465, 1632, 1666
Sau96I GGNCC 2 cut(s) 633, 1680
SchI GAGTC 1 cut(s) 1353
ScrFI CCNGG 3 cut(s) 752, 1299, 1733
SfaNI GCATC 4 cut(s) 773, 1255, 1333, 1649
SfcI CTRYAG 1 cut(s) 8
SinI GGWCC 2 cut(s) 633, 1680
SmiMI CAYNNNNRTG 2 cut(s) 1115, 1203
SmlI CTYRAG 1 cut(s) 914
SmoI CTYRAG 1 cut(s) 914
SphI GCATGC 1 cut(s) 1474
SsiI CCGC 4 cut(s) 881, 929, 1507, 1644
SspI AATATT 2 cut(s) 900, 1099
SspMI CTAG 4 cut(s) 182, 506, 687, 1524
StyD4I CCNGG 3 cut(s) 750, 1297, 1731
StyI CCWWGG 2 cut(s) 232, 358
TaaI ACNGT 1 cut(s) 1767
TaiI ACGT 2 cut(s) 398, 1424
TaqI TCGA 2 cut(s) 213, 601
TaqII GACCGA 1 cut(s) 1697
TauI GCSGC 1 cut(s) 884
TfiI GAWTC 3 cut(s) 908, 1006, 1279
Tru1I TTAA 7 cut(s) 98, 333, 398, 663, 888, 1160, 1365
Tru9I TTAA 7 cut(s) 98, 333, 398, 663, 888, 1160, 1365
TscAI CASTG 3 cut(s) 1069, 1422, 1455
TseFI GTSAC 4 cut(s) 466, 1060, 1417, 1433
TseI GCWGC 3 cut(s) 878, 1427, 1565
Tsp45I GTSAC 4 cut(s) 466, 1060, 1417, 1433
TspGWI ACGGA 1 cut(s) 299
TspRI CASTG 3 cut(s) 1069, 1422, 1455
VpaK11BI GGWCC 2 cut(s) 633, 1680
VspI ATTAAT 1 cut(s) 333
XapI RAATTY 4 cut(s) 594, 940, 985, 1555
XceI RCATGY 1 cut(s) 1474
XmnI GAANNNNTTC 2 cut(s) 1283, 1626
XspI CTAG 4 cut(s) 182, 506, 687, 1524
Zsp2I ATGCAT 1 cut(s) 788
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.