Prupe.2G312500_v2.0.a1

Cyclic nucleotide-gated ion channel 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0000119
Physical Location & Seq
Reverse (-)
29494031 .. 29497590
3560 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G312500.1

Sequence Viewer

Length: 1764 bp
ATGAGTAACTTGTATGATCAGCCCACCATTCAAGTAAGCTTAACACCTTACACTTTGGGCAGTATTCAACTTGGAGGAGCTTCAGAAAGGTCGAGATTTGACAAACTTGTTGCAAATATTCCATTATGGAACCAAATATTTGTAATTTCATGTGTGATTGCAGTCTCATTGGACCCTTTGTTCTTCTACATTCCATTCATCAATGAAGATCTCAAGTGCCTTGGAATGGACAAAAATTTGAAGGTTGTGGCACTTGTTTTGCGGTCCCTCTTGGATATCACTTTCATAGTGCATATTATATGTCAAATTCGACAAGCCTTCAAAACTGTGAACTCCAAGCTACAAACAACCCGAAACTCCGGTTGGGAATCCAAAGCTAAGGCAGTTGCTCGGAATCTTTCATGGCGCTCTGTTGTTACTGACGTTCTTGCTCTTCTTCCCATCCCACAAGTTCTTTTAGTGAATGTTTTTTTCAAAATGAGAGGCTCTGGATATTTGGATAATAGAAAGATTCTAAGTTTCCTTCTTCTTGCGCAATATCTTCCAAGAATTTATCGAATTCACCTCTCCTCTAAGAAACTTACACAAACCGGACTATGGGCCAAAGGTGCATTCAACTTTTTTCTATACATACTCGCTAGTCATGTGCTCGGAGCTTATTGGTATTTTTTTTCTATTCAACGGGAGACATCATGCTGGCATCGGGCATGTGTGAAGCGTAGCATATCATGCATGGATACTTTTTACTGTGACGACCCTCCCACAACCCCCAGAAATACCGAGTTTCTAAAAGAGTTGTGTCCTATAAATTTTCCACCAAATGCTACACCGCCATTTGATTTTGGAATGTTTCTTGATTCACTTCAATCTGGAAACACGGCGACATTGAATTTTCCATTGAAGTTCTTTTACTCGTTTTGGTGGGGACTACGAAATTTAAGTAACTTTGGTACAAATCTCACAACGAGTACGTATGTGTGGGAAAACTTGTTTGCAATTCTTATTTCCATCATTGGCTTGCTGCTATTTTTATATCTCATAGGAAATGTGCAGACATTTATGCAGTTGGCCACTACAAAATCGGAGGAGACAAGACAGAAGATTATTAAGAAAGAGCAAGCGATAGAAGCGTGGATGGTCAAAAATGATCTCCCTGAAGATATGAAGAATGAAATCAAGAACAACATAAGACAACAATTGGAAGAAAACATAGATGCTGCTGATCTGGAGAACCTGTTCTCTATTCTTCCTTGGAATATCAGGAAATCTCTAAAGCGTTTTCTCTGCATGAGTACGCTAAGGAAAGTACCAATGCTTAAAGGCATGGATGAAAAGGTGTTGAAAATGATTTGCGACTATCTGAAGCCAGTTATGTACCCCGAGAACAGCTTAGTTGTTCGAATGGGACAACCACTTGATCGGATGCTCTTCATTACAGAAGGTTCGATATGGACGTACATGCCGGGTGGAATGCCGACCAACTCGGTTAAGACAAAAGGTGGGTTTTATGGAGAAGAACTTCTCAAGTGGGCATCATCTTCGTCACCAAAACTTCCCATCTCCACCCAAAATGTGCAATGCCATACCAAGGTGGAAGGCTTTGTATTGATGTCTAAGGACTTGACTAGTGTCGTCTCCAAATGCCAACTCTGGTGGAATACAAATGATTCTCATCAGGGACAGGGACAGGTACAGCCCGCTACAGCAGCGGGTGGTGCTGAGAACTCCACTCCAAGAATCAGGTATATCATGCATCCTCACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
Ion_trans

Protein Analysis

588

Amino Acids

67.09

Weight (kDa)

9.25

Isoelectric Point (pI)

46.14

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000119)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g10570 FvH4_4g36390 FvH4_7g31840 FvH4_7g31840 FvH4_7g31850 FvH4_7g31850 FvH4_7g31861 FvH4_7g31861 FvH4_7g31950
malus_domestica MD01G1054600.v1.1 MD01G1221100.v1.1 MD01G1221400.v1.1 MD01G1221600.v1.1 MD01G1221800.v1.1 MD01G1222000.v1.1 MD01G1222100.v1.1 MD07G1140800.v1.1 MD07G1291200.v1.1 MD07G1291400.v1.1 MD07G1291500.v1.1 MD07G1291700.v1.1 MD07G1292500.v1.1 MD07G1292700.v1.1 MD07G1292800.v1.1 MD07G1292900.v1.1 MD08G1241600.v1.1 MD11G1083800.v1.1 MD15G1431600.v1.1
prunus_persica Prupe.1G017800_v2.0.a1 Prupe.1G017800_v2.0.a1 Prupe.1G162800_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312700_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G143000_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1
pyrus_communis pycom01g23050 pycom01g23070 pycom01g23090 pycom01g23100 pycom01g23110 pycom01g23120 pycom01g23170 pycom07g26410 pycom07g26440 pycom07g26470 pycom07g26480 pycom07g26490 pycom07g26500 pycom07g26510 pycom07g26530 pycom07g26540 pycom07g26570 pycom07g26580 pycom07g26590 pycom08g20940
rosa_chinensis RchiOBHm_Chr1g0324571 RchiOBHm_Chr1g0336181 RchiOBHm_Chr1g0381061 RchiOBHm_Chr1g0381091 RchiOBHm_Chr1g0381121 RchiOBHm_Chr1g0381131 RchiOBHm_Chr1g0381141 RchiOBHm_Chr1g0381161 RchiOBHm_Chr1g0381211 RchiOBHm_Chr2g0110361 RchiOBHm_Chr2g0120231 RchiOBHm_Chr3g0486281 RchiOBHm_Chr3g0486311 RchiOBHm_Chr3g0486401 RchiOBHm_Chr4g0409511 RchiOBHm_Chr4g0409521 RchiOBHm_Chr5g0017271 RchiOBHm_Chr5g0048781 RchiOBHm_Chr5g0048811
rosa_laevigata RLG00000002401 RLG00000008559 RLG00000017798 RLG00000017799 RLG00000023082 RLG00000023088 RLG00000026230 RLG00000026238 RLG00000026240 RLG00000026241 RLG00000026242 RLG00000026243 RLG00000026244 RLG00000026246 RLG00000026247 RLG00000026248 RLG00000029876 RLG00000030189 RLG00000034579
rosa_multiflora Rmu_co8101374.1_g000001 Rmu_co8309149.1_g000001 Rmu_co8450063.1_g000001 Rmu_sc0000441.1_g000094 Rmu_sc0000479.1_g000005 Rmu_sc0000647.1_g000006 Rmu_sc0001393.1_g000031 Rmu_sc0001423.1_g000037 Rmu_sc0001616.1_g000015 Rmu_sc0001857.1_g000011 Rmu_sc0002183.1_g000013 Rmu_sc0002183.1_g000028 Rmu_sc0002183.1_g000030 Rmu_sc0002688.1_g000003 Rmu_sc0002688.1_g000020 Rmu_sc0003801.1_g000003 Rmu_sc0003801.1_g000004 Rmu_sc0004125.1_g000006 Rmu_sc0004494.1_g000005 Rmu_sc0004494.1_g000006 Rmu_sc0004494.1_g000008 Rmu_sc0004494.1_g000009 Rmu_sc0005842.1_g000004 Rmu_sc0006872.1_g000001 Rmu_sc0006872.1_g000005 Rmu_sc0006872.1_g000009 Rmu_sc0006872.1_g000010 Rmu_sc0008053.1_g000026
rosa_roxburghii Rroxscaffold_159G00432960 Rroxscaffold_1G00033060 Rroxscaffold_2G00123150 Rroxscaffold_2G00123170 Rroxscaffold_2G00133500 Rroxscaffold_2G00133550 Rroxscaffold_4G00278650 Rroxscaffold_4G00278750 Rroxscaffold_4G00278790 Rroxscaffold_4G00278800 Rroxscaffold_4G00278810 Rroxscaffold_4G00325390 Rroxscaffold_5G00354010 Rroxscaffold_6G00395890 Rroxscaffold_6G00395900 Rroxscaffold_6G00395920
rosa_rugosa Rorug01G0046900.1 Rorug01G0427000 Rorug01G0427100 Rorug01G0427200 Rorug01G0427300 Rorug01G0427400 Rorug01G0427500 Rorug01G0427500 Rorug01G0427600 Rorug01G0427600 Rorug01G0427700 Rorug01G0427700 Rorug01G0427800 Rorug01G0428700 Rorug02G0166400 Rorug02G0166500 Rorug02G0166500 Rorug02G0166600 Rorug02G0166600 Rorug02G0166700 Rorug02G0167300 Rorug02G0167300 Rorug02G0167300 Rorug03G0224600 Rorug03G0224600 Rorug04G0094400 Rorug05G0241100 Rorug05G0241200
rosa_samantha Rh1BG407700 Rh1BG407900 Rh1BG409000 Rh1CG064700 Rh1CG420900 Rh1CG421000 Rh1CG421200 Rh1CG421300 Rh1CG421800 Rh1CG421900 Rh1CG422000 Rh1CG422200 Rh1CG422300 Rh1CG423600 Rh1DG437600 Rh1DG438900 Rh1DG439000 Rh1DG440300 Rh2AG219100 Rh2CG220700 Rh2DG225300 Rh3AG274400 Rh3AG274600 Rh3CG308900 Rh3DG305800 Rh4AG156400 Rh5AG129000 Rh5AG320900 Rh5CG139600
rosa_wichuraiana Rw1G005300 Rw1G039280 Rw1G039300 Rw1G039310 Rw1G039320 Rw1G039330 Rw1G039340 Rw1G039360 Rw1G039390 Rw2G016910 Rw2G022800 Rw3G024330 Rw3G024340 Rw3G024350 Rw3G024400 Rw4G012810 Rw5G030120 Rw5G030280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 534
AciI CCGC 4 cut(s) 262, 830, 1698, 1709
AcoI YGGCCR 1 cut(s) 1068
AcsI RAATTY 7 cut(s) 235, 306, 549, 558, 808, 889, 934
AcuI CTGAAG 3 cut(s) 66, 1176, 1382
AfaI GTAC 7 cut(s) 952, 970, 1294, 1308, 1376, 1457, 1692
AfiI CCNNNNNNNGG 3 cut(s) 226, 597, 1588
AhlI ACTAGT 1 cut(s) 1625
AjuI GAANNNNNNNTTGG 4 cut(s) 346, 378, 596, 628
AloI GAACNNNNNNTCC 4 cut(s) 164, 196, 1220, 1252
AluBI AGCT 6 cut(s) 39, 80, 340, 377, 656, 1389
AluI AGCT 6 cut(s) 39, 80, 340, 377, 656, 1389
Alw21I GWGCWC 1 cut(s) 651
Alw26I GTCTC 4 cut(s) 169, 680, 1082, 1639
Ama87I CYCGRG 1 cut(s) 1379
AoxI GGCC 2 cut(s) 600, 1068
ApeKI GCWGC 3 cut(s) 1021, 1217, 1706
ApoI RAATTY 7 cut(s) 235, 306, 549, 558, 808, 889, 934
Asp700I GAANNNNTTC 2 cut(s) 1235, 1518
AspLEI GCGC 2 cut(s) 408, 535
AspS9I GGNCC 3 cut(s) 172, 264, 600
AsuC2I CCSGG 1 cut(s) 1464
AsuHPI GGTGA 2 cut(s) 554, 1536
AsuII TTCGAA 1 cut(s) 1399
AvaI CYCGRG 1 cut(s) 1379
AvaII GGWCC 2 cut(s) 172, 264
BalI TGGCCA 1 cut(s) 1070
BarI GAAGNNNNNNTAC 2 cut(s) 893, 925
Bbv12I GWGCWC 1 cut(s) 651
BbvI GCAGC 3 cut(s) 1008, 1204, 1718
BccI CCATC 4 cut(s) 449, 1016, 1129, 1565
BceAI ACGGC 1 cut(s) 894
BcgI CGANNNNNNTGC 2 cut(s) 1521, 1555
BciVI GTATCC 1 cut(s) 730
BclI TGATCA 1 cut(s) 16
BcnI CCSGG 1 cut(s) 1464
BcoDI GTCTC 4 cut(s) 169, 680, 1082, 1639
BcuI ACTAGT 1 cut(s) 1625
BfaI CTAG 3 cut(s) 639, 1626, 1762
BfmI CTRYAG 1 cut(s) 1701
BfoI RGCGCY 1 cut(s) 409
BfuI GTATCC 1 cut(s) 730
BglII AGATCT 1 cut(s) 208
BisI GCNGC 3 cut(s) 1022, 1218, 1707
BlsI GCNGC 3 cut(s) 1023, 1219, 1708
Bme1390I CCNGG 1 cut(s) 1464
Bme18I GGWCC 2 cut(s) 172, 264
BmeT110I CYCGRG 1 cut(s) 1379
BmgT120I GGNCC 3 cut(s) 172, 264, 600
BmiI GGNNCC 3 cut(s) 131, 174, 266
BmrFI CCNGG 1 cut(s) 1464
BmsI GCATC 4 cut(s) 709, 1204, 1413, 1541
BoxI GACNNNNGTC 1 cut(s) 1628
BpmI CTGGAG 1 cut(s) 1247
Bpu10I CCTNAGC 2 cut(s) 378, 1298
Bpu14I TTCGAA 1 cut(s) 1399
BpuEI CTTGAG 2 cut(s) 197, 1508
BpuMI CCSGG 1 cut(s) 1464
BsaAI YACGTR 1 cut(s) 972
BsaBI GATNNNNATC 1 cut(s) 1671
BsaJI CCNNGG 3 cut(s) 220, 1250, 1587
BsaWI WCCGGW 2 cut(s) 359, 590
BsaXI ACNNNNNCTCC 2 cut(s) 1220, 1250
Bsc4I CCNNNNNNNGG 3 cut(s) 226, 597, 1588
Bse1I ACTGG 1 cut(s) 1367
Bse3DI GCAATG 1 cut(s) 1583
Bse8I GATNNNNATC 1 cut(s) 1671
BseDI CCNNGG 3 cut(s) 220, 1250, 1587
BseGI GGATG 5 cut(s) 441, 1140, 1333, 1428, 1753
BseJI GATNNNNATC 1 cut(s) 1671
BseLI CCNNNNNNNGG 3 cut(s) 226, 597, 1588
BseMI GCAATG 1 cut(s) 1583
BseMII CTCAG 1 cut(s) 1710
BseNI ACTGG 1 cut(s) 1367
BseRI GAGGAG 3 cut(s) 90, 559, 1100
BseXI GCAGC 3 cut(s) 1008, 1204, 1718
BsgI GTGCAG 1 cut(s) 1070
BshFI GGCC 2 cut(s) 602, 1070
BsiHKAI GWGCWC 1 cut(s) 651
BsiHKCI CYCGRG 1 cut(s) 1379
BsiSI CCGG 3 cut(s) 360, 591, 1463
BslFI GGGAC 5 cut(s) 250, 939, 1419, 1692, 1698
BslI CCNNNNNNNGG 3 cut(s) 226, 597, 1588
BsmAI GTCTC 4 cut(s) 169, 680, 1082, 1639
BsmBI CGTCTC 1 cut(s) 1639
BsmFI GGGAC 5 cut(s) 250, 939, 1419, 1692, 1698
BsmI GAATGC 2 cut(s) 611, 1476
BsnI GGCC 2 cut(s) 602, 1070
BsoBI CYCGRG 1 cut(s) 1379
Bsp119I TTCGAA 1 cut(s) 1399
Bsp1286I GDGCHC 1 cut(s) 651
Bsp143I GATC 5 cut(s) 16, 208, 1147, 1222, 1417
BspACI CCGC 4 cut(s) 262, 830, 1698, 1709
BspANI GGCC 2 cut(s) 602, 1070
BspCNI CTCAG 1 cut(s) 1711
BspLI GGNNCC 3 cut(s) 131, 174, 266
BspQI GCTCTTC 2 cut(s) 438, 1433
BspT104I TTCGAA 1 cut(s) 1399
BsrDI GCAATG 1 cut(s) 1583
BsrI ACTGG 1 cut(s) 1367
BssECI CCNNGG 3 cut(s) 220, 1250, 1587
BssMI GATC 5 cut(s) 16, 208, 1147, 1222, 1417
BssT1I CCWWGG 3 cut(s) 220, 1250, 1587
Bst4CI ACNGT 2 cut(s) 328, 749
Bst6I CTCTTC 2 cut(s) 438, 1433
BstAPI GCANNNNNTGC 1 cut(s) 729
BstBAI YACGTR 1 cut(s) 972
BstBI TTCGAA 1 cut(s) 1399
BstC8I GCNNGC 4 cut(s) 698, 1019, 1119, 1698
BstDEI CTNAG 7 cut(s) 378, 515, 573, 1298, 1390, 1614, 1719
BstF5I GGATG 5 cut(s) 441, 1140, 1333, 1428, 1753
BstH2I RGCGCY 1 cut(s) 409
BstHHI GCGC 2 cut(s) 408, 535
BstKTI GATC 5 cut(s) 19, 211, 1150, 1225, 1420
BstMAI GTCTC 4 cut(s) 169, 680, 1082, 1639
BstMBI GATC 5 cut(s) 16, 208, 1147, 1222, 1417
BstMWI GCNNNNNNNGC 5 cut(s) 608, 729, 1127, 1706, 1715
BstNSI RCATGY 2 cut(s) 711, 1462
BstPAI GACNNNNGTC 1 cut(s) 1628
BstSCI CCNGG 1 cut(s) 1462
BstSFI CTRYAG 1 cut(s) 1701
BstSNI TACGTA 1 cut(s) 972
BstV1I GCAGC 3 cut(s) 1008, 1204, 1718
BstX2I RGATCY 1 cut(s) 208
BstYI RGATCY 1 cut(s) 208
BsuI GTATCC 1 cut(s) 730
BsuRI GGCC 2 cut(s) 602, 1070
BtsCI GGATG 5 cut(s) 441, 1140, 1333, 1428, 1753
Cac8I GCNNGC 4 cut(s) 698, 1019, 1119, 1698
CfoI GCGC 2 cut(s) 408, 535
Cfr13I GGNCC 3 cut(s) 172, 264, 600
Csp6I GTAC 7 cut(s) 951, 969, 1293, 1307, 1375, 1456, 1691
CspCI CAANNNNNGTGG 2 cut(s) 1634, 1669
CviQI GTAC 7 cut(s) 951, 969, 1293, 1307, 1375, 1456, 1691
DdeI CTNAG 7 cut(s) 378, 515, 573, 1298, 1390, 1614, 1719
DpnI GATC 5 cut(s) 18, 210, 1149, 1224, 1419
DpnII GATC 5 cut(s) 16, 208, 1147, 1222, 1417
EaeI YGGCCR 1 cut(s) 1068
Eam1104I CTCTTC 2 cut(s) 438, 1433
EarI CTCTTC 2 cut(s) 438, 1433
Eco105I TACGTA 1 cut(s) 972
Eco130I CCWWGG 3 cut(s) 220, 1250, 1587
Eco32I GATATC 1 cut(s) 277
Eco47I GGWCC 2 cut(s) 172, 264
Eco57I CTGAAG 3 cut(s) 66, 1176, 1382
Eco88I CYCGRG 1 cut(s) 1379
EcoRI GAATTC 1 cut(s) 558
EcoRV GATATC 1 cut(s) 277
EcoT14I CCWWGG 3 cut(s) 220, 1250, 1587
EcoT22I ATGCAT 2 cut(s) 734, 1755
ErhI CCWWGG 3 cut(s) 220, 1250, 1587
Esp3I CGTCTC 1 cut(s) 1639
FaqI GGGAC 5 cut(s) 250, 939, 1419, 1692, 1698
FauI CCCGC 2 cut(s) 1702, 1705
FbaI TGATCA 1 cut(s) 16
Fnu4HI GCNGC 3 cut(s) 1022, 1218, 1707
FokI GGATG 5 cut(s) 428, 1147, 1340, 1435, 1740
Fsp4HI GCNGC 3 cut(s) 1022, 1218, 1707
FspBI CTAG 3 cut(s) 639, 1626, 1762
FspI TGCGCA 1 cut(s) 534
GlaI GCGC 2 cut(s) 407, 534
GluI GCNGC 3 cut(s) 1022, 1218, 1707
GsuI CTGGAG 1 cut(s) 1247
HaeII RGCGCY 1 cut(s) 409
HaeIII GGCC 2 cut(s) 602, 1070
HapII CCGG 3 cut(s) 360, 591, 1463
HhaI GCGC 2 cut(s) 408, 535
Hin6I GCGC 2 cut(s) 406, 533
HinP1I GCGC 2 cut(s) 406, 533
HindIII AAGCTT 1 cut(s) 37
HinfI GANTC 6 cut(s) 368, 394, 511, 857, 1667, 1737
HpaII CCGG 3 cut(s) 360, 591, 1463
HphI GGTGA 2 cut(s) 554, 1536
Hpy166II GTNNAC 1 cut(s) 331
Hpy188I TCNGA 6 cut(s) 85, 393, 653, 1084, 1362, 1422
Hpy188III TCNNGA 7 cut(s) 93, 489, 854, 870, 1177, 1226, 1261
Hpy8I GTNNAC 1 cut(s) 331
HpyAV CCTTC 5 cut(s) 235, 328, 533, 1433, 1589
HpyCH4III ACNGT 2 cut(s) 328, 749
HpyCH4IV ACGT 3 cut(s) 423, 971, 1454
HpyF10VI GCNNNNNNNGC 5 cut(s) 608, 729, 1127, 1706, 1715
HpyF3I CTNAG 7 cut(s) 378, 515, 573, 1298, 1390, 1614, 1719
HpySE526I ACGT 3 cut(s) 423, 971, 1454
HspAI GCGC 2 cut(s) 406, 533
Ksp22I TGATCA 1 cut(s) 16
Kzo9I GATC 5 cut(s) 16, 208, 1147, 1222, 1417
LguI GCTCTTC 2 cut(s) 438, 1433
LmnI GCTCC 2 cut(s) 77, 653
Lsp1109I GCAGC 3 cut(s) 1008, 1204, 1718
LweI GCATC 4 cut(s) 709, 1204, 1413, 1541
MaeI CTAG 3 cut(s) 639, 1626, 1762
MaeII ACGT 3 cut(s) 423, 971, 1454
MaeIII GTNAC 5 cut(s) 5, 415, 749, 941, 1542
MalI GATC 5 cut(s) 18, 210, 1149, 1224, 1419
MboI GATC 5 cut(s) 16, 208, 1147, 1222, 1417
MfeI CAATTG 1 cut(s) 1196
MflI RGATCY 1 cut(s) 208
MhlI GDGCHC 1 cut(s) 651
MlsI TGGCCA 1 cut(s) 1070
MluNI TGGCCA 1 cut(s) 1070
MnlI CCTC 7 cut(s) 68, 278, 476, 575, 580, 768, 1078
Mox20I TGGCCA 1 cut(s) 1070
Mph1103I ATGCAT 2 cut(s) 734, 1755
MroXI GAANNNNTTC 2 cut(s) 1235, 1518
MscI TGGCCA 1 cut(s) 1070
MseI TTAA 5 cut(s) 41, 938, 1107, 1317, 1488
Msp20I TGGCCA 1 cut(s) 1070
MspA1I CMGCKG 1 cut(s) 1709
MspI CCGG 3 cut(s) 360, 591, 1463
MspR9I CCNGG 1 cut(s) 1464
MunI CAATTG 1 cut(s) 1196
Mva1269I GAATGC 2 cut(s) 611, 1476
MwoI GCNNNNNNNGC 5 cut(s) 608, 729, 1127, 1706, 1715
NciI CCSGG 1 cut(s) 1464
NdeII GATC 5 cut(s) 16, 208, 1147, 1222, 1417
NlaIV GGNNCC 3 cut(s) 131, 174, 266
NmuCI GTSAC 2 cut(s) 749, 1542
NsbI TGCGCA 1 cut(s) 534
NsiI ATGCAT 2 cut(s) 734, 1755
NspI RCATGY 2 cut(s) 711, 1462
NspV TTCGAA 1 cut(s) 1399
PciSI GCTCTTC 2 cut(s) 438, 1433
PcsI WCGNNNNNNNCGW 1 cut(s) 1451
PctI GAATGC 2 cut(s) 611, 1476
PdmI GAANNNNTTC 2 cut(s) 1235, 1518
PfeI GAWTC 6 cut(s) 368, 394, 511, 857, 1667, 1737
PkrI GCNGC 3 cut(s) 1023, 1219, 1708
Ppu21I YACGTR 1 cut(s) 972
PshAI GACNNNNGTC 1 cut(s) 1628
PspN4I GGNNCC 3 cut(s) 131, 174, 266
PspPI GGNCC 3 cut(s) 172, 264, 600
PsuI RGATCY 1 cut(s) 208
RsaI GTAC 7 cut(s) 952, 970, 1294, 1308, 1376, 1457, 1692
RsaNI GTAC 7 cut(s) 951, 969, 1293, 1307, 1375, 1456, 1691
SapI GCTCTTC 2 cut(s) 438, 1433
SaqAI TTAA 5 cut(s) 41, 938, 1107, 1317, 1488
SatI GCNGC 3 cut(s) 1022, 1218, 1707
Sau3AI GATC 5 cut(s) 16, 208, 1147, 1222, 1417
Sau96I GGNCC 3 cut(s) 172, 264, 600
ScrFI CCNGG 1 cut(s) 1464
SduI GDGCHC 1 cut(s) 651
SfaNI GCATC 4 cut(s) 709, 1204, 1413, 1541
SfcI CTRYAG 1 cut(s) 1701
SfuI TTCGAA 1 cut(s) 1399
SinI GGWCC 2 cut(s) 172, 264
SmlI CTYRAG 2 cut(s) 212, 1523
SmoI CTYRAG 2 cut(s) 212, 1523
SnaBI TACGTA 1 cut(s) 972
SpeI ACTAGT 1 cut(s) 1625
SsiI CCGC 4 cut(s) 262, 830, 1698, 1709
SspI AATATT 2 cut(s) 118, 138
SspMI CTAG 3 cut(s) 639, 1626, 1762
StyD4I CCNGG 1 cut(s) 1462
StyI CCWWGG 3 cut(s) 220, 1250, 1587
TaaI ACNGT 2 cut(s) 328, 749
TaiI ACGT 3 cut(s) 426, 974, 1457
TaqI TCGA 5 cut(s) 92, 310, 556, 1399, 1445
TfiI GAWTC 6 cut(s) 368, 394, 511, 857, 1667, 1737
Tru1I TTAA 5 cut(s) 41, 938, 1107, 1317, 1488
Tru9I TTAA 5 cut(s) 41, 938, 1107, 1317, 1488
TseFI GTSAC 2 cut(s) 749, 1542
TseI GCWGC 3 cut(s) 1021, 1217, 1706
Tsp45I GTSAC 2 cut(s) 749, 1542
TspDTI ATGAA 9 cut(s) 138, 187, 219, 274, 390, 1178, 1185, 1344, 1420
VpaK11BI GGWCC 2 cut(s) 172, 264
XapI RAATTY 7 cut(s) 235, 306, 549, 558, 808, 889, 934
XceI RCATGY 2 cut(s) 711, 1462
XmnI GAANNNNTTC 2 cut(s) 1235, 1518
XspI CTAG 3 cut(s) 639, 1626, 1762
Zsp2I ATGCAT 2 cut(s) 734, 1755
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.