Rroxscaffold_2G00133550

Cyclic nucleotide-gated ion channel 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0000119
Physical Location & Seq
Forward (+)
70939944 .. 70942589
2646 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00133550.1

Sequence Viewer

Length: 1344 bp
ATGCGTCATTCGTCTAAAAAACTTAGACAAAAGACTGGAATATGGGTTAAAGGTTCATTCTATTTTTTCTTGTACATCCTTGCCAGTCATGTACTCGGAGCTTTTTGGTATTACTTTTCCATTCAACAAGAGACATCATGTTGGTACCGGGCGTGTGAAAAGCATGGTGGAGTAGAATGTAACTTTTACTGTCATGAAAACATGACTTTAAGAGATATGACATTCATCGATTCTATAGATACATTCTGCCTTGTAGATGTTCCGACAAATGAAACAACACCATTTGATTTCGGAATCTTTCTTGATTCTCTTAAGAATAATATCACGACACCAATACAATTTCCAAAGAAGTTCTTTTACTCTTTTTGGTGGGGGCTTCGGAATCTGAGTAATTTTGGCACAAGTTTGGAAACAAGTACTTATGTCTGGGAAAACTGCTTTGCAATTCTGATTTCTATCATTGGCCTACTATTATTCTTATATCTCATTGGAAAAGTACAGACATTTATTTCGATGCAAACTGAGAATTCCGAGGAGAGAATAAAAAGGTTCAGATCGAAAGAGCTAGATATACAAATGTGGATGAGAAGAAACGGTTTGAAGAGAGAAATGAGGAAAGACATCAAAGAAAATATAAATGAAAAATGGGAAGAAATACAAAATGCAGATATAGAGAATCTCTTCTCTATTCTTCCCGTGCAATCTCGAAAAACTCTTAAACATTCTCTTTGCATGGAAATGCTGAGGAAGGTGCCAAAACTTAAAACTCTGAACGATGAAGCTTTAACATTGATCTGCGCATTTCTGAAGCCAGTAGTCTATCAGGATAATAGCTATGTTTTTCAAGTAGGAGAACCACTTGATCGCATTCTCTTCATTACAGAAGGCTTGATATGGACGTACGAGGCCGCGGCCACTACTGATAGTAGTAGTACTGGTGAAGATGGAAAAGGAAAACCTGGTTTCAGTTGTCTTGAGAAAGGTGGTTTTTACGGAGACGATCAACTTCTGAGTTGGGCTATAGCATCACACAAGAATGATATTTCCTTTAGCAACCTTCCGATCTCGAAAAAGAATGTGAAATGCCATGCAAAAGTAGAAGGCTTTGTACTCATGGCCAAGGACTTGAAAACTGTAGTCTCCGCTAATTACAAAGTTTATTGGGGTTTCCACGATTCTTATCAGGAAAGAGAGGAGGCCGCAATTCAAGCAATTAGGAATGTAGTTCATCGTAACAAAGATAGACCAAAGGGAATTCCAATGATGTCATTCCCAGCCCGGCCACTGGCTACAGTAGTTGATGCTGATGAGAACTCGCCAACAATAGCAAGGAAGGATTTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
Ion_trans

Protein Analysis

447

Amino Acids

51.77

Weight (kDa)

8.37

Isoelectric Point (pI)

39.93

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000119)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g10570 FvH4_4g36390 FvH4_7g31840 FvH4_7g31840 FvH4_7g31850 FvH4_7g31850 FvH4_7g31861 FvH4_7g31861 FvH4_7g31950
malus_domestica MD01G1054600.v1.1 MD01G1221100.v1.1 MD01G1221400.v1.1 MD01G1221600.v1.1 MD01G1221800.v1.1 MD01G1222000.v1.1 MD01G1222100.v1.1 MD07G1140800.v1.1 MD07G1291200.v1.1 MD07G1291400.v1.1 MD07G1291500.v1.1 MD07G1291700.v1.1 MD07G1292500.v1.1 MD07G1292700.v1.1 MD07G1292800.v1.1 MD07G1292900.v1.1 MD08G1241600.v1.1 MD11G1083800.v1.1 MD15G1431600.v1.1
prunus_persica Prupe.1G017800_v2.0.a1 Prupe.1G017800_v2.0.a1 Prupe.1G162800_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312700_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G143000_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1
pyrus_communis pycom01g23050 pycom01g23070 pycom01g23090 pycom01g23100 pycom01g23110 pycom01g23120 pycom01g23170 pycom07g26410 pycom07g26440 pycom07g26470 pycom07g26480 pycom07g26490 pycom07g26500 pycom07g26510 pycom07g26530 pycom07g26540 pycom07g26570 pycom07g26580 pycom07g26590 pycom08g20940
rosa_chinensis RchiOBHm_Chr1g0324571 RchiOBHm_Chr1g0336181 RchiOBHm_Chr1g0381061 RchiOBHm_Chr1g0381091 RchiOBHm_Chr1g0381121 RchiOBHm_Chr1g0381131 RchiOBHm_Chr1g0381141 RchiOBHm_Chr1g0381161 RchiOBHm_Chr1g0381211 RchiOBHm_Chr2g0110361 RchiOBHm_Chr2g0120231 RchiOBHm_Chr3g0486281 RchiOBHm_Chr3g0486311 RchiOBHm_Chr3g0486401 RchiOBHm_Chr4g0409511 RchiOBHm_Chr4g0409521 RchiOBHm_Chr5g0017271 RchiOBHm_Chr5g0048781 RchiOBHm_Chr5g0048811
rosa_laevigata RLG00000002401 RLG00000008559 RLG00000017798 RLG00000017799 RLG00000023082 RLG00000023088 RLG00000026230 RLG00000026238 RLG00000026240 RLG00000026241 RLG00000026242 RLG00000026243 RLG00000026244 RLG00000026246 RLG00000026247 RLG00000026248 RLG00000029876 RLG00000030189 RLG00000034579
rosa_multiflora Rmu_co8101374.1_g000001 Rmu_co8309149.1_g000001 Rmu_co8450063.1_g000001 Rmu_sc0000441.1_g000094 Rmu_sc0000479.1_g000005 Rmu_sc0000647.1_g000006 Rmu_sc0001393.1_g000031 Rmu_sc0001423.1_g000037 Rmu_sc0001616.1_g000015 Rmu_sc0001857.1_g000011 Rmu_sc0002183.1_g000013 Rmu_sc0002183.1_g000028 Rmu_sc0002183.1_g000030 Rmu_sc0002688.1_g000003 Rmu_sc0002688.1_g000020 Rmu_sc0003801.1_g000003 Rmu_sc0003801.1_g000004 Rmu_sc0004125.1_g000006 Rmu_sc0004494.1_g000005 Rmu_sc0004494.1_g000006 Rmu_sc0004494.1_g000008 Rmu_sc0004494.1_g000009 Rmu_sc0005842.1_g000004 Rmu_sc0006872.1_g000001 Rmu_sc0006872.1_g000005 Rmu_sc0006872.1_g000009 Rmu_sc0006872.1_g000010 Rmu_sc0008053.1_g000026
rosa_roxburghii Rroxscaffold_159G00432960 Rroxscaffold_1G00033060 Rroxscaffold_2G00123150 Rroxscaffold_2G00123170 Rroxscaffold_2G00133500 Rroxscaffold_2G00133550 Rroxscaffold_4G00278650 Rroxscaffold_4G00278750 Rroxscaffold_4G00278790 Rroxscaffold_4G00278800 Rroxscaffold_4G00278810 Rroxscaffold_4G00325390 Rroxscaffold_5G00354010 Rroxscaffold_6G00395890 Rroxscaffold_6G00395900 Rroxscaffold_6G00395920
rosa_rugosa Rorug01G0046900.1 Rorug01G0427000 Rorug01G0427100 Rorug01G0427200 Rorug01G0427300 Rorug01G0427400 Rorug01G0427500 Rorug01G0427500 Rorug01G0427600 Rorug01G0427600 Rorug01G0427700 Rorug01G0427700 Rorug01G0427800 Rorug01G0428700 Rorug02G0166400 Rorug02G0166500 Rorug02G0166500 Rorug02G0166600 Rorug02G0166600 Rorug02G0166700 Rorug02G0167300 Rorug02G0167300 Rorug02G0167300 Rorug03G0224600 Rorug03G0224600 Rorug04G0094400 Rorug05G0241100 Rorug05G0241200
rosa_samantha Rh1BG407700 Rh1BG407900 Rh1BG409000 Rh1CG064700 Rh1CG420900 Rh1CG421000 Rh1CG421200 Rh1CG421300 Rh1CG421800 Rh1CG421900 Rh1CG422000 Rh1CG422200 Rh1CG422300 Rh1CG423600 Rh1DG437600 Rh1DG438900 Rh1DG439000 Rh1DG440300 Rh2AG219100 Rh2CG220700 Rh2DG225300 Rh3AG274400 Rh3AG274600 Rh3CG308900 Rh3DG305800 Rh4AG156400 Rh5AG129000 Rh5AG320900 Rh5CG139600
rosa_wichuraiana Rw1G005300 Rw1G039280 Rw1G039300 Rw1G039310 Rw1G039320 Rw1G039330 Rw1G039340 Rw1G039360 Rw1G039390 Rw2G016910 Rw2G022800 Rw3G024330 Rw3G024340 Rw3G024350 Rw3G024400 Rw4G012810 Rw5G030120 Rw5G030280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 799
Acc65I GGTACC 1 cut(s) 144
AccB1I GGYRCC 2 cut(s) 144, 751
AccII CGCG 1 cut(s) 911
AciI CCGC 4 cut(s) 909, 911, 1143, 1200
AcoI YGGCCR 3 cut(s) 912, 1116, 1280
AcsI RAATTY 2 cut(s) 526, 1254
AcuI CTGAAG 1 cut(s) 827
AfaI GTAC 8 cut(s) 74, 93, 146, 418, 498, 902, 934, 1110
AfiI CCNNNNNNNGG 1 cut(s) 1285
AflII CTTAAG 1 cut(s) 311
AgsI TTSAA 5 cut(s) 125, 601, 845, 1129, 1208
AjnI CCWGG 1 cut(s) 958
AluBI AGCT 4 cut(s) 101, 565, 782, 834
AluI AGCT 4 cut(s) 101, 565, 782, 834
Alw26I GTCTC 3 cut(s) 125, 990, 1144
AoxI GGCC 6 cut(s) 463, 906, 912, 1116, 1197, 1280
ApoI RAATTY 2 cut(s) 526, 1254
ArsI GACNNNNNNTTYG 2 cut(s) 493, 525
Asp700I GAANNNNTTC 1 cut(s) 680
Asp718I GGTACC 1 cut(s) 144
AspLEI GCGC 1 cut(s) 800
AsuC2I CCSGG 2 cut(s) 149, 1279
AsuHPI GGTGA 1 cut(s) 950
BalI TGGCCA 1 cut(s) 1118
BanI GGYRCC 2 cut(s) 144, 751
BarI GAAGNNNNNNTAC 4 cut(s) 341, 373, 1092, 1124
BbvCI CCTCAGC 1 cut(s) 743
BccI CCATC 1 cut(s) 938
BciT130I CCWGG 1 cut(s) 960
BcnI CCSGG 2 cut(s) 149, 1279
BcoDI GTCTC 3 cut(s) 125, 990, 1144
BfaI CTAG 1 cut(s) 566
BfmI CTRYAG 4 cut(s) 234, 1020, 1134, 1290
BfrI CTTAAG 1 cut(s) 311
BisI GCNGC 3 cut(s) 909, 912, 1200
BlsI GCNGC 3 cut(s) 910, 913, 1201
BmcAI AGTACT 2 cut(s) 418, 934
Bme1390I CCNGG 3 cut(s) 149, 960, 1279
BmiI GGNNCC 2 cut(s) 146, 753
BmrFI CCNGG 3 cut(s) 149, 960, 1279
BmsI GCATC 3 cut(s) 504, 1034, 1291
Bpu10I CCTNAGC 1 cut(s) 743
BpuEI CTTGAG 1 cut(s) 995
BpuMI CCSGG 2 cut(s) 149, 1279
Bsa29I ATCGAT 1 cut(s) 228
BsaBI GATNNNNATC 2 cut(s) 455, 1179
BsaJI CCNNGG 3 cut(s) 531, 909, 1119
Bsc4I CCNNNNNNNGG 1 cut(s) 1285
Bse1I ACTGG 5 cut(s) 40, 84, 812, 940, 1290
Bse8I GATNNNNATC 2 cut(s) 455, 1179
BseBI CCWGG 1 cut(s) 960
BseCI ATCGAT 1 cut(s) 228
BseDI CCNNGG 3 cut(s) 531, 909, 1119
BseGI GGATG 2 cut(s) 75, 588
BseJI GATNNNNATC 2 cut(s) 455, 1179
BseLI CCNNNNNNNGG 1 cut(s) 1285
BseMII CTCAG 4 cut(s) 377, 513, 734, 1001
BseNI ACTGG 5 cut(s) 40, 84, 812, 940, 1290
BseRI GAGGAG 2 cut(s) 548, 1208
BseYI CCCAGC 1 cut(s) 1273
Bsh1236I CGCG 1 cut(s) 911
BshFI GGCC 6 cut(s) 465, 908, 914, 1118, 1199, 1282
BshNI GGYRCC 2 cut(s) 144, 751
BshVI ATCGAT 1 cut(s) 228
BsiSI CCGG 2 cut(s) 148, 1279
BsiWI CGTACG 1 cut(s) 900
BslI CCNNNNNNNGG 1 cut(s) 1285
BsmAI GTCTC 3 cut(s) 125, 990, 1144
BsmBI CGTCTC 1 cut(s) 990
BsmI GAATGC 1 cut(s) 867
BsnI GGCC 6 cut(s) 465, 908, 914, 1118, 1199, 1282
Bsp1407I TGTACA 1 cut(s) 72
Bsp143I GATC 5 cut(s) 554, 792, 862, 1000, 1062
BspACI CCGC 4 cut(s) 909, 911, 1143, 1200
BspANI GGCC 6 cut(s) 465, 908, 914, 1118, 1199, 1282
BspCNI CTCAG 4 cut(s) 378, 514, 735, 1002
BspDI ATCGAT 1 cut(s) 228
BspFNI CGCG 1 cut(s) 911
BspHI TCATGA 1 cut(s) 193
BspLI GGNNCC 2 cut(s) 146, 753
BspT107I GGYRCC 2 cut(s) 144, 751
BspTI CTTAAG 1 cut(s) 311
BsrGI TGTACA 1 cut(s) 72
BsrI ACTGG 5 cut(s) 40, 84, 812, 940, 1290
BssECI CCNNGG 3 cut(s) 531, 909, 1119
BssMI GATC 5 cut(s) 554, 792, 862, 1000, 1062
BssT1I CCWWGG 1 cut(s) 1119
Bst2UI CCWGG 1 cut(s) 960
Bst4CI ACNGT 4 cut(s) 191, 596, 1135, 1294
Bst6I CTCTTC 3 cut(s) 596, 686, 878
BstAFI CTTAAG 1 cut(s) 311
BstAUI TGTACA 1 cut(s) 72
BstDEI CTNAG 5 cut(s) 23, 386, 522, 743, 1010
BstDSI CCRYGG 1 cut(s) 909
BstF5I GGATG 2 cut(s) 75, 588
BstFNI CGCG 1 cut(s) 911
BstHHI GCGC 1 cut(s) 800
BstKTI GATC 5 cut(s) 557, 795, 865, 1003, 1065
BstMAI GTCTC 3 cut(s) 125, 990, 1144
BstMBI GATC 5 cut(s) 554, 792, 862, 1000, 1062
BstMWI GCNNNNNNNGC 1 cut(s) 1208
BstNI CCWGG 1 cut(s) 960
BstSCI CCNGG 3 cut(s) 147, 958, 1277
BstSFI CTRYAG 4 cut(s) 234, 1020, 1134, 1290
BstUI CGCG 1 cut(s) 911
Bsu15I ATCGAT 1 cut(s) 228
BsuRI GGCC 6 cut(s) 465, 908, 914, 1118, 1199, 1282
BsuTUI ATCGAT 1 cut(s) 228
BtgI CCRYGG 1 cut(s) 909
BtsCI GGATG 2 cut(s) 75, 588
BtsIMutI CAGTG 1 cut(s) 1283
CciI TCATGA 1 cut(s) 193
CfoI GCGC 1 cut(s) 800
Cfr42I CCGCGG 1 cut(s) 912
ClaI ATCGAT 1 cut(s) 228
CsiI ACCWGGT 1 cut(s) 958
Csp6I GTAC 8 cut(s) 73, 92, 145, 417, 497, 901, 933, 1109
CviAII CATG 8 cut(s) 89, 138, 164, 194, 202, 733, 1088, 1114
CviQI GTAC 8 cut(s) 73, 92, 145, 417, 497, 901, 933, 1109
DdeI CTNAG 5 cut(s) 23, 386, 522, 743, 1010
DpnI GATC 5 cut(s) 556, 794, 864, 1002, 1064
DpnII GATC 5 cut(s) 554, 792, 862, 1000, 1062
EaeI YGGCCR 3 cut(s) 912, 1116, 1280
Eam1104I CTCTTC 3 cut(s) 596, 686, 878
EarI CTCTTC 3 cut(s) 596, 686, 878
Eco130I CCWWGG 1 cut(s) 1119
Eco57I CTGAAG 1 cut(s) 827
EcoRI GAATTC 2 cut(s) 526, 1254
EcoRII CCWGG 1 cut(s) 958
EcoT14I CCWWGG 1 cut(s) 1119
ErhI CCWWGG 1 cut(s) 1119
Esp3I CGTCTC 1 cut(s) 990
FaeI CATG 8 cut(s) 92, 141, 167, 197, 205, 736, 1091, 1117
FalI AAGNNNNNCTT 2 cut(s) 338, 370
FatI CATG 8 cut(s) 88, 137, 163, 193, 201, 732, 1087, 1113
Fnu4HI GCNGC 3 cut(s) 909, 912, 1200
FokI GGATG 2 cut(s) 62, 595
Fsp4HI GCNGC 3 cut(s) 909, 912, 1200
FspBI CTAG 1 cut(s) 566
FspI TGCGCA 1 cut(s) 799
GlaI GCGC 1 cut(s) 799
GluI GCNGC 3 cut(s) 909, 912, 1200
GsaI CCCAGC 1 cut(s) 1277
HaeIII GGCC 6 cut(s) 465, 908, 914, 1118, 1199, 1282
HapII CCGG 2 cut(s) 148, 1279
HhaI GCGC 1 cut(s) 800
Hin1II CATG 8 cut(s) 92, 141, 167, 197, 205, 736, 1091, 1117
Hin6I GCGC 1 cut(s) 798
HinP1I GCGC 1 cut(s) 798
HindIII AAGCTT 1 cut(s) 780
HinfI GANTC 6 cut(s) 230, 294, 305, 382, 676, 1175
HpaII CCGG 2 cut(s) 148, 1279
HphI GGTGA 1 cut(s) 950
Hpy188III TCNNGA 8 cut(s) 194, 302, 325, 705, 824, 974, 1066, 1184
HpyAV CCTTC 5 cut(s) 742, 878, 1067, 1094, 1327
HpyCH4III ACNGT 4 cut(s) 191, 596, 1135, 1294
HpyCH4IV ACGT 1 cut(s) 899
HpyCH4V TGCA 6 cut(s) 443, 517, 665, 700, 732, 1091
HpyF10VI GCNNNNNNNGC 1 cut(s) 1208
HpyF3I CTNAG 5 cut(s) 23, 386, 522, 743, 1010
HpySE526I ACGT 1 cut(s) 899
Hsp92II CATG 8 cut(s) 92, 141, 167, 197, 205, 736, 1091, 1117
HspAI GCGC 1 cut(s) 798
KpnI GGTACC 1 cut(s) 148
KspI CCGCGG 1 cut(s) 912
Kzo9I GATC 5 cut(s) 554, 792, 862, 1000, 1062
LmnI GCTCC 1 cut(s) 98
LweI GCATC 3 cut(s) 504, 1034, 1291
MabI ACCWGGT 1 cut(s) 958
MaeI CTAG 1 cut(s) 566
MaeII ACGT 1 cut(s) 899
MaeIII GTNAC 2 cut(s) 179, 1232
MalI GATC 5 cut(s) 556, 794, 864, 1002, 1064
MboI GATC 5 cut(s) 554, 792, 862, 1000, 1062
MboII GAAGA 7 cut(s) 600, 613, 662, 673, 683, 865, 953
MlsI TGGCCA 1 cut(s) 1118
MluCI AATT 8 cut(s) 338, 391, 444, 526, 1147, 1203, 1212, 1254
MluNI TGGCCA 1 cut(s) 1118
MmeI TCCRAC 1 cut(s) 287
MnlI CCTC 6 cut(s) 526, 606, 738, 898, 1186, 1189
Mox20I TGGCCA 1 cut(s) 1118
MroXI GAANNNNTTC 1 cut(s) 680
MscI TGGCCA 1 cut(s) 1118
MseI TTAA 6 cut(s) 48, 209, 312, 717, 762, 785
MslI CAYNNNNRTG 2 cut(s) 737, 1035
Msp20I TGGCCA 1 cut(s) 1118
MspA1I CMGCKG 1 cut(s) 911
MspCI CTTAAG 1 cut(s) 311
MspI CCGG 2 cut(s) 148, 1279
MspR9I CCNGG 3 cut(s) 149, 960, 1279
Mva1269I GAATGC 1 cut(s) 867
MvaI CCWGG 1 cut(s) 960
MvnI CGCG 1 cut(s) 911
MwoI GCNNNNNNNGC 1 cut(s) 1208
NciI CCSGG 2 cut(s) 149, 1279
NdeII GATC 5 cut(s) 554, 792, 862, 1000, 1062
NlaIII CATG 8 cut(s) 92, 141, 167, 197, 205, 736, 1091, 1117
NlaIV GGNNCC 2 cut(s) 146, 753
NsbI TGCGCA 1 cut(s) 799
PagI TCATGA 1 cut(s) 193
PctI GAATGC 1 cut(s) 867
PdmI GAANNNNTTC 1 cut(s) 680
PfeI GAWTC 6 cut(s) 230, 294, 305, 382, 676, 1175
Pfl23II CGTACG 1 cut(s) 900
PkrI GCNGC 3 cut(s) 910, 913, 1201
Psp6I CCWGG 1 cut(s) 958
PspFI CCCAGC 1 cut(s) 1273
PspGI CCWGG 1 cut(s) 958
PspLI CGTACG 1 cut(s) 900
PspN4I GGNNCC 2 cut(s) 146, 753
RsaI GTAC 8 cut(s) 74, 93, 146, 418, 498, 902, 934, 1110
RsaNI GTAC 8 cut(s) 73, 92, 145, 417, 497, 901, 933, 1109
RseI CAYNNNNRTG 2 cut(s) 737, 1035
SacII CCGCGG 1 cut(s) 912
SaqAI TTAA 6 cut(s) 48, 209, 312, 717, 762, 785
SatI GCNGC 3 cut(s) 909, 912, 1200
Sau3AI GATC 5 cut(s) 554, 792, 862, 1000, 1062
ScaI AGTACT 2 cut(s) 418, 934
ScrFI CCNGG 3 cut(s) 149, 960, 1279
SexAI ACCWGGT 1 cut(s) 958
SfaNI GCATC 3 cut(s) 504, 1034, 1291
SfcI CTRYAG 4 cut(s) 234, 1020, 1134, 1290
Sfr303I CCGCGG 1 cut(s) 912
SgrBI CCGCGG 1 cut(s) 912
SmiMI CAYNNNNRTG 2 cut(s) 737, 1035
SmlI CTYRAG 2 cut(s) 311, 974
SmoI CTYRAG 2 cut(s) 311, 974
Sse9I AATT 8 cut(s) 338, 391, 444, 526, 1147, 1203, 1212, 1254
SsiI CCGC 4 cut(s) 909, 911, 1143, 1200
SspMI CTAG 1 cut(s) 566
StyD4I CCNGG 3 cut(s) 147, 958, 1277
StyI CCWWGG 1 cut(s) 1119
TaaI ACNGT 4 cut(s) 191, 596, 1135, 1294
TaiI ACGT 1 cut(s) 902
TaqI TCGA 5 cut(s) 228, 512, 557, 706, 1067
TasI AATT 8 cut(s) 338, 391, 444, 526, 1147, 1203, 1212, 1254
TatI WGTACW 6 cut(s) 72, 91, 416, 496, 932, 1108
TauI GCSGC 3 cut(s) 911, 914, 1202
TfiI GAWTC 6 cut(s) 230, 294, 305, 382, 676, 1175
Tru1I TTAA 6 cut(s) 48, 209, 312, 717, 762, 785
Tru9I TTAA 6 cut(s) 48, 209, 312, 717, 762, 785
TscAI CASTG 1 cut(s) 1290
TspDTI ATGAA 8 cut(s) 45, 210, 214, 285, 654, 792, 865, 1217
TspGWI ACGGA 1 cut(s) 1008
TspRI CASTG 1 cut(s) 1290
Vha464I CTTAAG 1 cut(s) 311
XapI RAATTY 2 cut(s) 526, 1254
XmnI GAANNNNTTC 1 cut(s) 680
XspI CTAG 1 cut(s) 566
ZrmI AGTACT 2 cut(s) 418, 934
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.