RLG00000017798

Cyclic nucleotide-gated ion channel 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0000119
Physical Location & Seq
Reverse (-)
21386872 .. 21390731
3860 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000017798

Sequence Viewer

Length: 1890 bp
ATGATGAGTAATCTGGAGAACCCGGAAGAGCCCATATTTAACTCGAGAAATAGCAGTCTTAGGAATCCAAGTTCCGTATATGATGTCGTTGAGGAAGTTGCACCATCACATCAGAGAAAAATGAAAAGGACAGCGACTGAAAGACTTCTTGCAACTTTGAAATCACACCGGAGTATCATACTCACAATTTCATGTGTGATTGCAGTCTTAGTGGATCCATTGTTCTTTTACCTTCAAATAATTGATGAGAAAAAGAAGTGCATTGGAATGGATACAATATTGAAAAATGTGGCACTTATTTTCCGATCACTCACCGATATCGGTTTCATAGTGAATATAATACATAAAATTCGTGAAGCTGTGAAGAAAACAAGAGCAGATATACAGTTGGTTAGTCTTCAAACAATTGAAAAAAAGACAATTGGAAAACTAAATGGAGATGAGAGAAATGAGTTTGCTAAGTCATTAGCTCGTAACTTGTCGTGGCACTCTATCGTAATTGATTTTTTCGCTGTTCTTCCCATCCCCCAAGTGATAATAGTAGTTGTTAGAAGCTCTAGATTTTTGGATAAAAGAAAGATTCTAAACTTTCTTCTTCTCGCCCAATATTTGCCAAGGGGTTATCGAATGCGTCATTCATCTAAAAAGCTTAGGCAAAAGACTGGAATATGGGTTAAAGGTTCATTCTATTTTTTCTTGTACATCCTTGCCAGTCATGTACTCGGAGCTTTTTGGTATTACTTTTCTATTCAACAAGAGACATCATGTTGGCATCGGGCGTGTGAAAAGCATGGTGGAGTAGAATGTAACTTTTACTGTCATGAAAACATGACTTTAAGAGATATGACATTCATCAATTCTATAGATACATTCTGCCTTGTAGATGTTCCAACAAATGAGACAACACCATTTGATTTCGGAATCTTTCTTGATTCTCTTAAGAATAATATCACGACACCAATACAATTTCCAAAGAAGTTCTTTTACTCTTTTTGGTGGGGGCTTCGGAATCTGAGGTTTAACTACAGTACTTATTCTTGTTGCTTGACATTTATTTCGATGCAAACTGAGAATTCCGAGGAGAGAATAAAAAGGTTCAGATCGAAAGAGCTAGATATACAAATGTGGATGAGAAGAAACGGTTTGAAGAGAGAGATGAGGAAAGATATCAAAGAAAATATAAATGAAAATTGGGAAGAAATACAAAATGCAGACATAGAGAATCTCTTCTCTATTCTTCCCGTGCAATCTCGAAAAACTCTTAAACATTCTCTTTGCATGGAAACGCTGAGGAAGGTGCCAAAGCTTAAAGCTCTGAAAGATGAAGCTTTGACATTGATCTGCGCATTTCTGAAGCCAGTGGTCTATCAGGATAATAGCTATGTTTTCCAAGTAGGAGAACCACTCGATCGCATTCTCTTCATTACAGAAGGCTTGATATGGGCGTACGAGGCTGCGGCCACTACTGATAGTGGTAGTACTGGTGAAGATGGAAAAGGAAAACCCGGTTTCAGTGTTCTTGAGAAAGGTGGTTTTTACGGAGACGATCAACTTCTGAGTTGGGCTATAGCATCACACAAGAATGATATTTCCTTTAGCAACCTTCCGATCTCGAAAATGAATGTGAAATGCCATGCAAAAGTAGAAGGCTTTGTACTCATGGCCAAGGACTTGAAAACTGTAGTCTCCGCTAATTACAAAGTTTATTGGGGTTTCCACGATTCTTATCAGGAAAGAGAGGAGGCGGCAATTCAAGCCATTAGGAGTGCGGTTCATCGTAACAAAAATAGACCAAAGGGAATTCCAATGATGTCATTCCCAGCCCGGCCACTGGCTACAGTAGTTGATGGTGATGAGAACTCGCCAAAAACAGCAAGGAAGGATTTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
Ion_trans

Protein Analysis

630

Amino Acids

72.63

Weight (kDa)

9.28

Isoelectric Point (pI)

45.18

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000119)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g10570 FvH4_4g36390 FvH4_7g31840 FvH4_7g31840 FvH4_7g31850 FvH4_7g31850 FvH4_7g31861 FvH4_7g31861 FvH4_7g31950
malus_domestica MD01G1054600.v1.1 MD01G1221100.v1.1 MD01G1221400.v1.1 MD01G1221600.v1.1 MD01G1221800.v1.1 MD01G1222000.v1.1 MD01G1222100.v1.1 MD07G1140800.v1.1 MD07G1291200.v1.1 MD07G1291400.v1.1 MD07G1291500.v1.1 MD07G1291700.v1.1 MD07G1292500.v1.1 MD07G1292700.v1.1 MD07G1292800.v1.1 MD07G1292900.v1.1 MD08G1241600.v1.1 MD11G1083800.v1.1 MD15G1431600.v1.1
prunus_persica Prupe.1G017800_v2.0.a1 Prupe.1G017800_v2.0.a1 Prupe.1G162800_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312700_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G143000_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1
pyrus_communis pycom01g23050 pycom01g23070 pycom01g23090 pycom01g23100 pycom01g23110 pycom01g23120 pycom01g23170 pycom07g26410 pycom07g26440 pycom07g26470 pycom07g26480 pycom07g26490 pycom07g26500 pycom07g26510 pycom07g26530 pycom07g26540 pycom07g26570 pycom07g26580 pycom07g26590 pycom08g20940
rosa_chinensis RchiOBHm_Chr1g0324571 RchiOBHm_Chr1g0336181 RchiOBHm_Chr1g0381061 RchiOBHm_Chr1g0381091 RchiOBHm_Chr1g0381121 RchiOBHm_Chr1g0381131 RchiOBHm_Chr1g0381141 RchiOBHm_Chr1g0381161 RchiOBHm_Chr1g0381211 RchiOBHm_Chr2g0110361 RchiOBHm_Chr2g0120231 RchiOBHm_Chr3g0486281 RchiOBHm_Chr3g0486311 RchiOBHm_Chr3g0486401 RchiOBHm_Chr4g0409511 RchiOBHm_Chr4g0409521 RchiOBHm_Chr5g0017271 RchiOBHm_Chr5g0048781 RchiOBHm_Chr5g0048811
rosa_laevigata RLG00000002401 RLG00000008559 RLG00000017798 RLG00000017799 RLG00000023082 RLG00000023088 RLG00000026230 RLG00000026238 RLG00000026240 RLG00000026241 RLG00000026242 RLG00000026243 RLG00000026244 RLG00000026246 RLG00000026247 RLG00000026248 RLG00000029876 RLG00000030189 RLG00000034579
rosa_multiflora Rmu_co8101374.1_g000001 Rmu_co8309149.1_g000001 Rmu_co8450063.1_g000001 Rmu_sc0000441.1_g000094 Rmu_sc0000479.1_g000005 Rmu_sc0000647.1_g000006 Rmu_sc0001393.1_g000031 Rmu_sc0001423.1_g000037 Rmu_sc0001616.1_g000015 Rmu_sc0001857.1_g000011 Rmu_sc0002183.1_g000013 Rmu_sc0002183.1_g000028 Rmu_sc0002183.1_g000030 Rmu_sc0002688.1_g000003 Rmu_sc0002688.1_g000020 Rmu_sc0003801.1_g000003 Rmu_sc0003801.1_g000004 Rmu_sc0004125.1_g000006 Rmu_sc0004494.1_g000005 Rmu_sc0004494.1_g000006 Rmu_sc0004494.1_g000008 Rmu_sc0004494.1_g000009 Rmu_sc0005842.1_g000004 Rmu_sc0006872.1_g000001 Rmu_sc0006872.1_g000005 Rmu_sc0006872.1_g000009 Rmu_sc0006872.1_g000010 Rmu_sc0008053.1_g000026
rosa_roxburghii Rroxscaffold_159G00432960 Rroxscaffold_1G00033060 Rroxscaffold_2G00123150 Rroxscaffold_2G00123170 Rroxscaffold_2G00133500 Rroxscaffold_2G00133550 Rroxscaffold_4G00278650 Rroxscaffold_4G00278750 Rroxscaffold_4G00278790 Rroxscaffold_4G00278800 Rroxscaffold_4G00278810 Rroxscaffold_4G00325390 Rroxscaffold_5G00354010 Rroxscaffold_6G00395890 Rroxscaffold_6G00395900 Rroxscaffold_6G00395920
rosa_rugosa Rorug01G0046900.1 Rorug01G0427000 Rorug01G0427100 Rorug01G0427200 Rorug01G0427300 Rorug01G0427400 Rorug01G0427500 Rorug01G0427500 Rorug01G0427600 Rorug01G0427600 Rorug01G0427700 Rorug01G0427700 Rorug01G0427800 Rorug01G0428700 Rorug02G0166400 Rorug02G0166500 Rorug02G0166500 Rorug02G0166600 Rorug02G0166600 Rorug02G0166700 Rorug02G0167300 Rorug02G0167300 Rorug02G0167300 Rorug03G0224600 Rorug03G0224600 Rorug04G0094400 Rorug05G0241100 Rorug05G0241200
rosa_samantha Rh1BG407700 Rh1BG407900 Rh1BG409000 Rh1CG064700 Rh1CG420900 Rh1CG421000 Rh1CG421200 Rh1CG421300 Rh1CG421800 Rh1CG421900 Rh1CG422000 Rh1CG422200 Rh1CG422300 Rh1CG423600 Rh1DG437600 Rh1DG438900 Rh1DG439000 Rh1DG440300 Rh2AG219100 Rh2CG220700 Rh2DG225300 Rh3AG274400 Rh3AG274600 Rh3CG308900 Rh3DG305800 Rh4AG156400 Rh5AG129000 Rh5AG320900 Rh5CG139600
rosa_wichuraiana Rw1G005300 Rw1G039280 Rw1G039300 Rw1G039310 Rw1G039320 Rw1G039330 Rw1G039340 Rw1G039360 Rw1G039390 Rw2G016910 Rw2G022800 Rw3G024330 Rw3G024340 Rw3G024350 Rw3G024400 Rw4G012810 Rw5G030120 Rw5G030280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1345
AccB1I GGYRCC 1 cut(s) 1297
AciI CCGC 4 cut(s) 1457, 1689, 1745, 1769
AclWI GGATC 2 cut(s) 209, 222
AcoI YGGCCR 3 cut(s) 1458, 1662, 1826
AcsI RAATTY 3 cut(s) 348, 1072, 1800
AcuI CTGAAG 1 cut(s) 1373
AfaI GTAC 6 cut(s) 701, 720, 1030, 1448, 1480, 1656
AfiI CCNNNNNNNGG 1 cut(s) 1831
AflII CTTAAG 1 cut(s) 938
AgsI TTSAA 9 cut(s) 160, 236, 283, 401, 410, 752, 1147, 1675, 1754
AloI GAACNNNNNNTCC 4 cut(s) 55, 87, 206, 238
Alw26I GTCTC 4 cut(s) 752, 893, 1536, 1690
AlwI GGATC 2 cut(s) 209, 222
AlwNI CAGNNNCTG 1 cut(s) 137
Ama87I CYCGRG 1 cut(s) 43
AoxI GGCC 3 cut(s) 1458, 1662, 1826
ApeKI GCWGC 1 cut(s) 1454
ApoI RAATTY 3 cut(s) 348, 1072, 1800
ArsI GACNNNNNNTTYG 2 cut(s) 1039, 1071
Asp700I GAANNNNTTC 2 cut(s) 144, 1226
AspLEI GCGC 1 cut(s) 1346
AsuC2I CCSGG 3 cut(s) 23, 1506, 1825
AsuHPI GGTGA 3 cut(s) 304, 1496, 1862
AvaI CYCGRG 1 cut(s) 43
BaeI ACNNNNGTAYC 2 cut(s) 157, 190
BalI TGGCCA 1 cut(s) 1664
BamHI GGATCC 1 cut(s) 214
BanI GGYRCC 1 cut(s) 1297
BanII GRGCYC 1 cut(s) 33
BarI GAAGNNNNNNTAC 4 cut(s) 968, 1000, 1638, 1670
BbsI GAAGAC 1 cut(s) 389
BbvCI CCTCAGC 1 cut(s) 1289
BbvI GCAGC 1 cut(s) 1441
BccI CCATC 4 cut(s) 112, 530, 1484, 1841
BciVI GTATCC 1 cut(s) 265
BcnI CCSGG 3 cut(s) 23, 1506, 1825
BcoDI GTCTC 4 cut(s) 752, 893, 1536, 1690
BfaI CTAG 2 cut(s) 558, 1112
BfmI CTRYAG 5 cut(s) 861, 1024, 1566, 1680, 1836
BfrI CTTAAG 1 cut(s) 938
BfuI GTATCC 1 cut(s) 265
BisI GCNGC 3 cut(s) 1455, 1458, 1746
BlsI GCNGC 3 cut(s) 1456, 1459, 1747
BmcAI AGTACT 2 cut(s) 1030, 1480
Bme1390I CCNGG 3 cut(s) 23, 1506, 1825
BmeT110I CYCGRG 1 cut(s) 43
BmiI GGNNCC 2 cut(s) 216, 1299
BmrFI CCNGG 3 cut(s) 23, 1506, 1825
BmsI GCATC 3 cut(s) 781, 1050, 1580
BpiI GAAGAC 1 cut(s) 389
BplI GAGNNNNNCTC 2 cut(s) 1389, 1421
BpmI CTGGAG 1 cut(s) 35
Bpu10I CCTNAGC 2 cut(s) 650, 1289
BpuEI CTTGAG 1 cut(s) 1541
BpuMI CCSGG 3 cut(s) 23, 1506, 1825
BsaBI GATNNNNATC 1 cut(s) 1725
BsaJI CCNNGG 3 cut(s) 614, 1077, 1665
BsaWI WCCGGW 1 cut(s) 168
Bsc4I CCNNNNNNNGG 1 cut(s) 1831
Bse1I ACTGG 5 cut(s) 667, 711, 1358, 1486, 1836
Bse8I GATNNNNATC 1 cut(s) 1725
BseDI CCNNGG 3 cut(s) 614, 1077, 1665
BseGI GGATG 3 cut(s) 522, 702, 1134
BseJI GATNNNNATC 1 cut(s) 1725
BseLI CCNNNNNNNGG 1 cut(s) 1831
BseMII CTCAG 4 cut(s) 1004, 1059, 1280, 1547
BseNI ACTGG 5 cut(s) 667, 711, 1358, 1486, 1836
BseRI GAGGAG 2 cut(s) 1094, 1754
BseXI GCAGC 1 cut(s) 1441
BseYI CCCAGC 1 cut(s) 1819
Bsh1285I CGRYCG 1 cut(s) 1411
BshFI GGCC 3 cut(s) 1460, 1664, 1828
BshNI GGYRCC 1 cut(s) 1297
BsiEI CGRYCG 1 cut(s) 1411
BsiHKCI CYCGRG 1 cut(s) 43
BsiSI CCGG 4 cut(s) 23, 169, 1506, 1825
BsiWI CGTACG 1 cut(s) 1446
BslI CCNNNNNNNGG 1 cut(s) 1831
BsmAI GTCTC 4 cut(s) 752, 893, 1536, 1690
BsmBI CGTCTC 1 cut(s) 1536
BsmI GAATGC 2 cut(s) 633, 1413
BsnI GGCC 3 cut(s) 1460, 1664, 1828
BsoBI CYCGRG 1 cut(s) 43
Bsp1286I GDGCHC 1 cut(s) 33
Bsp1407I TGTACA 1 cut(s) 699
Bsp143I GATC 7 cut(s) 214, 305, 1100, 1338, 1408, 1546, 1608
BspACI CCGC 4 cut(s) 1457, 1689, 1745, 1769
BspANI GGCC 3 cut(s) 1460, 1664, 1828
BspCNI CTCAG 4 cut(s) 1005, 1060, 1281, 1548
BspHI TCATGA 1 cut(s) 820
BspLI GGNNCC 2 cut(s) 216, 1299
BspPI GGATC 2 cut(s) 209, 222
BspQI GCTCTTC 1 cut(s) 21
BspT107I GGYRCC 1 cut(s) 1297
BspTI CTTAAG 1 cut(s) 938
BsrGI TGTACA 1 cut(s) 699
BsrI ACTGG 5 cut(s) 667, 711, 1358, 1486, 1836
BssECI CCNNGG 3 cut(s) 614, 1077, 1665
BssMI GATC 7 cut(s) 214, 305, 1100, 1338, 1408, 1546, 1608
BssT1I CCWWGG 2 cut(s) 614, 1665
Bst4CI ACNGT 6 cut(s) 387, 818, 1028, 1142, 1681, 1840
Bst6I CTCTTC 4 cut(s) 21, 1142, 1232, 1424
BstAFI CTTAAG 1 cut(s) 938
BstAUI TGTACA 1 cut(s) 699
BstDEI CTNAG 8 cut(s) 59, 208, 459, 650, 1013, 1068, 1289, 1556
BstF5I GGATG 3 cut(s) 522, 702, 1134
BstHHI GCGC 1 cut(s) 1346
BstKTI GATC 7 cut(s) 217, 308, 1103, 1341, 1411, 1549, 1611
BstMAI GTCTC 4 cut(s) 752, 893, 1536, 1690
BstMBI GATC 7 cut(s) 214, 305, 1100, 1338, 1408, 1546, 1608
BstMCI CGRYCG 1 cut(s) 1411
BstMWI GCNNNNNNNGC 2 cut(s) 1451, 1754
BstSCI CCNGG 3 cut(s) 21, 1504, 1823
BstSFI CTRYAG 5 cut(s) 861, 1024, 1566, 1680, 1836
BstV1I GCAGC 1 cut(s) 1441
BstV2I GAAGAC 1 cut(s) 389
BstX2I RGATCY 1 cut(s) 214
BstYI RGATCY 1 cut(s) 214
BsuI GTATCC 1 cut(s) 265
BsuRI GGCC 3 cut(s) 1460, 1664, 1828
BtsCI GGATG 3 cut(s) 522, 702, 1134
BtsIMutI CAGTG 3 cut(s) 1365, 1519, 1829
CaiI CAGNNNCTG 1 cut(s) 137
CciI TCATGA 1 cut(s) 820
CfoI GCGC 1 cut(s) 1346
CseI GACGC 1 cut(s) 620
Csp6I GTAC 6 cut(s) 700, 719, 1029, 1447, 1479, 1655
CviAII CATG 9 cut(s) 192, 716, 765, 791, 821, 829, 1279, 1634, 1660
CviQI GTAC 6 cut(s) 700, 719, 1029, 1447, 1479, 1655
DdeI CTNAG 8 cut(s) 59, 208, 459, 650, 1013, 1068, 1289, 1556
DpnI GATC 7 cut(s) 216, 307, 1102, 1340, 1410, 1548, 1610
DpnII GATC 7 cut(s) 214, 305, 1100, 1338, 1408, 1546, 1608
EaeI YGGCCR 3 cut(s) 1458, 1662, 1826
Eam1104I CTCTTC 4 cut(s) 21, 1142, 1232, 1424
EarI CTCTTC 4 cut(s) 21, 1142, 1232, 1424
Eco130I CCWWGG 2 cut(s) 614, 1665
Eco24I GRGCYC 1 cut(s) 33
Eco32I GATATC 2 cut(s) 319, 1168
Eco57I CTGAAG 1 cut(s) 1373
Eco88I CYCGRG 1 cut(s) 43
EcoRI GAATTC 2 cut(s) 1072, 1800
EcoRV GATATC 2 cut(s) 319, 1168
EcoT14I CCWWGG 2 cut(s) 614, 1665
EcoT38I GRGCYC 1 cut(s) 33
ErhI CCWWGG 2 cut(s) 614, 1665
Esp3I CGTCTC 1 cut(s) 1536
FaeI CATG 9 cut(s) 195, 719, 768, 794, 824, 832, 1282, 1637, 1663
FalI AAGNNNNNCTT 2 cut(s) 965, 997
FatI CATG 9 cut(s) 191, 715, 764, 790, 820, 828, 1278, 1633, 1659
Fnu4HI GCNGC 3 cut(s) 1455, 1458, 1746
FokI GGATG 3 cut(s) 509, 689, 1141
FriOI GRGCYC 1 cut(s) 33
Fsp4HI GCNGC 3 cut(s) 1455, 1458, 1746
FspBI CTAG 2 cut(s) 558, 1112
FspI TGCGCA 1 cut(s) 1345
GlaI GCGC 1 cut(s) 1345
GluI GCNGC 3 cut(s) 1455, 1458, 1746
GsaI CCCAGC 1 cut(s) 1823
GsuI CTGGAG 1 cut(s) 35
HaeIII GGCC 3 cut(s) 1460, 1664, 1828
HapII CCGG 4 cut(s) 23, 169, 1506, 1825
HgaI GACGC 1 cut(s) 620
HhaI GCGC 1 cut(s) 1346
Hin1II CATG 9 cut(s) 195, 719, 768, 794, 824, 832, 1282, 1637, 1663
Hin6I GCGC 1 cut(s) 1344
HinP1I GCGC 1 cut(s) 1344
HindIII AAGCTT 3 cut(s) 647, 1304, 1326
HinfI GANTC 7 cut(s) 64, 580, 921, 932, 1009, 1222, 1721
HpaII CCGG 4 cut(s) 23, 169, 1506, 1825
HphI GGTGA 3 cut(s) 304, 1496, 1862
HpyAV CCTTC 6 cut(s) 242, 1288, 1424, 1613, 1640, 1873
HpyCH4III ACNGT 6 cut(s) 387, 818, 1028, 1142, 1681, 1840
HpyCH4V TGCA 9 cut(s) 101, 152, 203, 261, 1063, 1211, 1246, 1278, 1637
HpyF10VI GCNNNNNNNGC 2 cut(s) 1451, 1754
HpyF3I CTNAG 8 cut(s) 59, 208, 459, 650, 1013, 1068, 1289, 1556
Hsp92II CATG 9 cut(s) 195, 719, 768, 794, 824, 832, 1282, 1637, 1663
HspAI GCGC 1 cut(s) 1344
Kzo9I GATC 7 cut(s) 214, 305, 1100, 1338, 1408, 1546, 1608
LguI GCTCTTC 1 cut(s) 21
LmnI GCTCC 1 cut(s) 725
Lsp1109I GCAGC 1 cut(s) 1441
LweI GCATC 3 cut(s) 781, 1050, 1580
MaeI CTAG 2 cut(s) 558, 1112
MaeIII GTNAC 3 cut(s) 473, 806, 1778
MalI GATC 7 cut(s) 216, 307, 1102, 1340, 1410, 1548, 1610
MboI GATC 7 cut(s) 214, 305, 1100, 1338, 1408, 1546, 1608
MfeI CAATTG 2 cut(s) 405, 420
MflI RGATCY 1 cut(s) 214
MhlI GDGCHC 1 cut(s) 33
MlsI TGGCCA 1 cut(s) 1664
MluNI TGGCCA 1 cut(s) 1664
MmeI TCCRAC 1 cut(s) 914
MnlI CCTC 8 cut(s) 85, 1008, 1072, 1152, 1284, 1444, 1732, 1735
Mox20I TGGCCA 1 cut(s) 1664
MroXI GAANNNNTTC 2 cut(s) 144, 1226
MscI TGGCCA 1 cut(s) 1664
MseI TTAA 7 cut(s) 39, 675, 836, 939, 1020, 1263, 1308
MslI CAYNNNNRTG 2 cut(s) 266, 1581
Msp20I TGGCCA 1 cut(s) 1664
MspCI CTTAAG 1 cut(s) 938
MspI CCGG 4 cut(s) 23, 169, 1506, 1825
MspR9I CCNGG 3 cut(s) 23, 1506, 1825
MunI CAATTG 2 cut(s) 405, 420
Mva1269I GAATGC 2 cut(s) 633, 1413
MwoI GCNNNNNNNGC 2 cut(s) 1451, 1754
NciI CCSGG 3 cut(s) 23, 1506, 1825
NdeII GATC 7 cut(s) 214, 305, 1100, 1338, 1408, 1546, 1608
NlaIII CATG 9 cut(s) 195, 719, 768, 794, 824, 832, 1282, 1637, 1663
NlaIV GGNNCC 2 cut(s) 216, 1299
NsbI TGCGCA 1 cut(s) 1345
PaeR7I CTCGAG 1 cut(s) 43
PagI TCATGA 1 cut(s) 820
PciSI GCTCTTC 1 cut(s) 21
PctI GAATGC 2 cut(s) 633, 1413
PdmI GAANNNNTTC 2 cut(s) 144, 1226
PfeI GAWTC 7 cut(s) 64, 580, 921, 932, 1009, 1222, 1721
Pfl23II CGTACG 1 cut(s) 1446
PkrI GCNGC 3 cut(s) 1456, 1459, 1747
Ple19I CGATCG 1 cut(s) 1411
PspFI CCCAGC 1 cut(s) 1819
PspLI CGTACG 1 cut(s) 1446
PspN4I GGNNCC 2 cut(s) 216, 1299
PstNI CAGNNNCTG 1 cut(s) 137
PsuI RGATCY 1 cut(s) 214
PvuI CGATCG 1 cut(s) 1411
RsaI GTAC 6 cut(s) 701, 720, 1030, 1448, 1480, 1656
RsaNI GTAC 6 cut(s) 700, 719, 1029, 1447, 1479, 1655
RseI CAYNNNNRTG 2 cut(s) 266, 1581
SapI GCTCTTC 1 cut(s) 21
SaqAI TTAA 7 cut(s) 39, 675, 836, 939, 1020, 1263, 1308
SatI GCNGC 3 cut(s) 1455, 1458, 1746
Sau3AI GATC 7 cut(s) 214, 305, 1100, 1338, 1408, 1546, 1608
ScaI AGTACT 2 cut(s) 1030, 1480
ScrFI CCNGG 3 cut(s) 23, 1506, 1825
SduI GDGCHC 1 cut(s) 33
SfaNI GCATC 3 cut(s) 781, 1050, 1580
SfcI CTRYAG 5 cut(s) 861, 1024, 1566, 1680, 1836
Sfr274I CTCGAG 1 cut(s) 43
SlaI CTCGAG 1 cut(s) 43
SmiMI CAYNNNNRTG 2 cut(s) 266, 1581
SmlI CTYRAG 3 cut(s) 43, 938, 1520
SmoI CTYRAG 3 cut(s) 43, 938, 1520
SsiI CCGC 4 cut(s) 1457, 1689, 1745, 1769
SspI AATATT 2 cut(s) 279, 608
SspMI CTAG 2 cut(s) 558, 1112
StyD4I CCNGG 3 cut(s) 21, 1504, 1823
StyI CCWWGG 2 cut(s) 614, 1665
TaaI ACNGT 6 cut(s) 387, 818, 1028, 1142, 1681, 1840
TaqI TCGA 7 cut(s) 44, 625, 1058, 1103, 1252, 1407, 1613
TatI WGTACW 5 cut(s) 699, 718, 1028, 1478, 1654
TauI GCSGC 2 cut(s) 1460, 1748
TfiI GAWTC 7 cut(s) 64, 580, 921, 932, 1009, 1222, 1721
Tru1I TTAA 7 cut(s) 39, 675, 836, 939, 1020, 1263, 1308
Tru9I TTAA 7 cut(s) 39, 675, 836, 939, 1020, 1263, 1308
TscAI CASTG 3 cut(s) 1365, 1519, 1836
TseI GCWGC 1 cut(s) 1454
TspGWI ACGGA 2 cut(s) 64, 1554
TspRI CASTG 3 cut(s) 1365, 1519, 1836
Vha464I CTTAAG 1 cut(s) 938
XapI RAATTY 3 cut(s) 348, 1072, 1800
XbaI TCTAGA 1 cut(s) 557
XhoI CTCGAG 1 cut(s) 43
XmnI GAANNNNTTC 2 cut(s) 144, 1226
XspI CTAG 2 cut(s) 558, 1112
ZrmI AGTACT 2 cut(s) 1030, 1480
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.