RchiOBHm_Chr5g0048781

Cyclic nucleotide-gated ion channel 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000119
Physical Location & Seq
Reverse (-)
46036867 .. 46042370
5504 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ32648

Sequence Viewer

Length: 1809 bp
ATGATTCAAAGCTCCGTATATGATGTCATTGCGAAAGCTGCACTATCACACCCGAGAGAAATGGAATGGATAGCGACTAAAGGACTTCTTGCAATTTTGAAATCACACCGGACTCTCATACTTACAATTTCATGTGTGATTGCAGTCTTAGTGGATCCATTGTTCTTTTACCTTCCAATAATTGATGGGAAAAGAAAGTGCATTGGAATGGACACAATATTGAGGAATGTGACACTTATTTTCCGATCACTCACCGATATCGGTTTCATAGTGAATATAATACATAAAATTTGTGAAGCTGTGAATAAAACAAGAGCAGATTGTCTTAAAAACATTGAAAAAATGACTGCTGAAGAACGAAATCGAGGTGAGAGCGGAAATAAGTTTGCTAAGTCATTAGCTCGTAACTTGTCGTGGCACACCATCTTAATCGACTTTTTGGCTGTTCTTCCCATCCCCCAAGTGATAATAGTAGCTGTTAGAAGCTCTAGATGTTTGGATAAAAGAAAGATGCTAAACTTTCTTCTTCTCGCCCAGTATCTGCCGAGGGTTTATCGAATGCGTTATTCATCTATACAACTTAGACCAAGGACTGGAATATGGGTTAAATGTTCATTCTATTTTTTCTTGTACATCCTTGCCAGCCATGTACTTGGAGCCTTTTGGTATTATTTTTCTATTCAACAAGAGACATCTTGTTGGCACCGGGCGTGCAAAAAGCATGGTGGAGTAAAATGTAATTTTTACTGTCATGAAAACATGACTTCAAGAGATTTGACATTCATCAATTCTATAGATAAATATTGCCTAGTAGATGTTCCGGCAAATGAAACTGCACCATTTGATTTTGGAATCTTTCTTGATTCTCTTAAGAATAATAACACCGCGTCAATACAATTTCCAAAGAAGTTTTTCTACTCTTATTGGTGGGGACTTCGAAATCTGAGTAATTTTGGCACAAATTTGCAAACAAGTACTTATGTGTGGGAAAACTGCTTTGCAATTCTGATTTCAATCATTGGCCTGCTATTATTCTTATATCTCATTGGAAAAGTACAGACATTTATTTCGATGAAAACTACGAATTCCGAGGAGAGAAGAAAAAAATTCAAATCAAAAGAGCTAGATATACAAATGTGGATGAGAAGCAATGATCTCAAGACAGATATGATGGAAGCCATCAGAGTACATACAAATAAAAAGTGGGAAGAAATACAAGATGCAAATATAGAGAACCTCTTCTCTATTCTTCCCGTGCAATCTCGGAAACATCTTAAACAATCTCTTTGCATGGAAATGCTGAGCAAGGTGCCAAAGCTTAGAACTCTGAAAGATGAAGCTTTGAAACCGATCTGCTATTGTCTGAAGCCAGTGGTCTATCAGGATAATAGCTTTGTTTTCCAAGAAGGAGAACCACTCGATCGCATTCTCTTCATCACAGAAGGCTTAATATGGACATACCAGGCGGCGGGCGCTACTGATAGTAGTAGCACTAGCCAAAATGGAAAAGGAAAAACAGGTTTCAGTTTTCTTCAGAAAGGTGAATTTTACGGAGACGATCAACTTCTGAGTTGGGTTATAGCATCACAACAGAATCTTCCCTTATTTACCAACCTTCCAATCTCCGAAGTGAATGTGAAATGCCATGCAAAAGTAGAAGGCTTTGTACTCATGGCCAAGGACTTGAAAATTGTGGTCTCCACTAATTACAAAGTTTATTGGGGTCTCCACAATTCTTCTCAGGAAAGAGAGAAGGCATTAATTCAAGCCGTAAAGAACGTACGGGATCGTCGTAAAATGCAAAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
Ion_trans

Protein Analysis

602

Amino Acids

69.59

Weight (kDa)

9.41

Isoelectric Point (pI)

42.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ion_trans PF00520 43 - 357 2e-07 Ion transport protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000119)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g10570 FvH4_4g36390 FvH4_7g31840 FvH4_7g31840 FvH4_7g31850 FvH4_7g31850 FvH4_7g31861 FvH4_7g31861 FvH4_7g31950
malus_domestica MD01G1054600.v1.1 MD01G1221100.v1.1 MD01G1221400.v1.1 MD01G1221600.v1.1 MD01G1221800.v1.1 MD01G1222000.v1.1 MD01G1222100.v1.1 MD07G1140800.v1.1 MD07G1291200.v1.1 MD07G1291400.v1.1 MD07G1291500.v1.1 MD07G1291700.v1.1 MD07G1292500.v1.1 MD07G1292700.v1.1 MD07G1292800.v1.1 MD07G1292900.v1.1 MD08G1241600.v1.1 MD11G1083800.v1.1 MD15G1431600.v1.1
prunus_persica Prupe.1G017800_v2.0.a1 Prupe.1G017800_v2.0.a1 Prupe.1G162800_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312700_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G143000_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1
pyrus_communis pycom01g23050 pycom01g23070 pycom01g23090 pycom01g23100 pycom01g23110 pycom01g23120 pycom01g23170 pycom07g26410 pycom07g26440 pycom07g26470 pycom07g26480 pycom07g26490 pycom07g26500 pycom07g26510 pycom07g26530 pycom07g26540 pycom07g26570 pycom07g26580 pycom07g26590 pycom08g20940
rosa_chinensis RchiOBHm_Chr1g0324571 RchiOBHm_Chr1g0336181 RchiOBHm_Chr1g0381061 RchiOBHm_Chr1g0381091 RchiOBHm_Chr1g0381121 RchiOBHm_Chr1g0381131 RchiOBHm_Chr1g0381141 RchiOBHm_Chr1g0381161 RchiOBHm_Chr1g0381211 RchiOBHm_Chr2g0110361 RchiOBHm_Chr2g0120231 RchiOBHm_Chr3g0486281 RchiOBHm_Chr3g0486311 RchiOBHm_Chr3g0486401 RchiOBHm_Chr4g0409511 RchiOBHm_Chr4g0409521 RchiOBHm_Chr5g0017271 RchiOBHm_Chr5g0048781 RchiOBHm_Chr5g0048811
rosa_laevigata RLG00000002401 RLG00000008559 RLG00000017798 RLG00000017799 RLG00000023082 RLG00000023088 RLG00000026230 RLG00000026238 RLG00000026240 RLG00000026241 RLG00000026242 RLG00000026243 RLG00000026244 RLG00000026246 RLG00000026247 RLG00000026248 RLG00000029876 RLG00000030189 RLG00000034579
rosa_multiflora Rmu_co8101374.1_g000001 Rmu_co8309149.1_g000001 Rmu_co8450063.1_g000001 Rmu_sc0000441.1_g000094 Rmu_sc0000479.1_g000005 Rmu_sc0000647.1_g000006 Rmu_sc0001393.1_g000031 Rmu_sc0001423.1_g000037 Rmu_sc0001616.1_g000015 Rmu_sc0001857.1_g000011 Rmu_sc0002183.1_g000013 Rmu_sc0002183.1_g000028 Rmu_sc0002183.1_g000030 Rmu_sc0002688.1_g000003 Rmu_sc0002688.1_g000020 Rmu_sc0003801.1_g000003 Rmu_sc0003801.1_g000004 Rmu_sc0004125.1_g000006 Rmu_sc0004494.1_g000005 Rmu_sc0004494.1_g000006 Rmu_sc0004494.1_g000008 Rmu_sc0004494.1_g000009 Rmu_sc0005842.1_g000004 Rmu_sc0006872.1_g000001 Rmu_sc0006872.1_g000005 Rmu_sc0006872.1_g000009 Rmu_sc0006872.1_g000010 Rmu_sc0008053.1_g000026
rosa_roxburghii Rroxscaffold_159G00432960 Rroxscaffold_1G00033060 Rroxscaffold_2G00123150 Rroxscaffold_2G00123170 Rroxscaffold_2G00133500 Rroxscaffold_2G00133550 Rroxscaffold_4G00278650 Rroxscaffold_4G00278750 Rroxscaffold_4G00278790 Rroxscaffold_4G00278800 Rroxscaffold_4G00278810 Rroxscaffold_4G00325390 Rroxscaffold_5G00354010 Rroxscaffold_6G00395890 Rroxscaffold_6G00395900 Rroxscaffold_6G00395920
rosa_rugosa Rorug01G0046900.1 Rorug01G0427000 Rorug01G0427100 Rorug01G0427200 Rorug01G0427300 Rorug01G0427400 Rorug01G0427500 Rorug01G0427500 Rorug01G0427600 Rorug01G0427600 Rorug01G0427700 Rorug01G0427700 Rorug01G0427800 Rorug01G0428700 Rorug02G0166400 Rorug02G0166500 Rorug02G0166500 Rorug02G0166600 Rorug02G0166600 Rorug02G0166700 Rorug02G0167300 Rorug02G0167300 Rorug02G0167300 Rorug03G0224600 Rorug03G0224600 Rorug04G0094400 Rorug05G0241100 Rorug05G0241200
rosa_samantha Rh1BG407700 Rh1BG407900 Rh1BG409000 Rh1CG064700 Rh1CG420900 Rh1CG421000 Rh1CG421200 Rh1CG421300 Rh1CG421800 Rh1CG421900 Rh1CG422000 Rh1CG422200 Rh1CG422300 Rh1CG423600 Rh1DG437600 Rh1DG438900 Rh1DG439000 Rh1DG440300 Rh2AG219100 Rh2CG220700 Rh2DG225300 Rh3AG274400 Rh3AG274600 Rh3CG308900 Rh3DG305800 Rh4AG156400 Rh5AG129000 Rh5AG320900 Rh5CG139600
rosa_wichuraiana Rw1G005300 Rw1G039280 Rw1G039300 Rw1G039310 Rw1G039320 Rw1G039330 Rw1G039340 Rw1G039360 Rw1G039390 Rw2G016910 Rw2G022800 Rw3G024330 Rw3G024340 Rw3G024350 Rw3G024400 Rw4G012810 Rw5G030120 Rw5G030280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 702, 1309
AccB7I CCANNNNNTGG 1 cut(s) 593
AccBSI CCGCTC 1 cut(s) 375
AccII CGCG 1 cut(s) 887
AciI CCGC 4 cut(s) 375, 885, 1466, 1469
AclWI GGATC 3 cut(s) 149, 162, 1794
AcoI YGGCCR 1 cut(s) 1674
AcsI RAATTY 5 cut(s) 288, 961, 1084, 1106, 1544
AcuI CTGAAG 3 cut(s) 372, 1385, 1517
AfaI GTAC 7 cut(s) 632, 651, 976, 1056, 1188, 1668, 1782
AfiI CCNNNNNNNGG 2 cut(s) 593, 1468
AflII CTTAAG 1 cut(s) 869
AjnI CCWGG 1 cut(s) 1461
AloI GAACNNNNNNTCC 2 cut(s) 146, 178
Alw26I GTCTC 4 cut(s) 683, 1548, 1702, 1730
AlwI GGATC 3 cut(s) 149, 162, 1794
AlwNI CAGNNNCTG 1 cut(s) 541
Ama87I CYCGRG 1 cut(s) 52
AoxI GGCC 2 cut(s) 1021, 1674
ApeKI GCWGC 1 cut(s) 38
ApoI RAATTY 5 cut(s) 288, 961, 1084, 1106, 1544
ArsI GACNNNNNNTTYG 2 cut(s) 1051, 1083
AseI ATTAAT 1 cut(s) 1760
Asp700I GAANNNNTTC 2 cut(s) 911, 1238
AspLEI GCGC 1 cut(s) 1475
AsuC2I CCSGG 1 cut(s) 707
AsuHPI GGTGA 3 cut(s) 244, 380, 1553
AsuII TTCGAA 1 cut(s) 937
AvaI CYCGRG 1 cut(s) 52
BalI TGGCCA 1 cut(s) 1676
BamHI GGATCC 1 cut(s) 154
BanI GGYRCC 2 cut(s) 702, 1309
BarI GAAGNNNNNNTAC 4 cut(s) 899, 931, 1650, 1682
BbvI GCAGC 1 cut(s) 25
BccI CCATC 5 cut(s) 179, 431, 461, 1165, 1187
BceAI ACGGC 1 cut(s) 1754
BciT130I CCWGG 1 cut(s) 1463
BcnI CCSGG 1 cut(s) 707
BcoDI GTCTC 4 cut(s) 683, 1548, 1702, 1730
BfaI CTAG 4 cut(s) 489, 809, 1124, 1494
BfmI CTRYAG 1 cut(s) 792
BfoI RGCGCY 1 cut(s) 1476
BfrI CTTAAG 1 cut(s) 869
BisI GCNGC 2 cut(s) 39, 1467
BlpI GCTNAGC 1 cut(s) 1301
BlsI GCNGC 2 cut(s) 40, 1468
BmcAI AGTACT 1 cut(s) 976
Bme1390I CCNGG 2 cut(s) 707, 1463
BmeT110I CYCGRG 1 cut(s) 52
BmiI GGNNCC 4 cut(s) 156, 658, 704, 1311
BmrFI CCNGG 2 cut(s) 707, 1463
BmrI ACTGGG 1 cut(s) 529
BmsI GCATC 3 cut(s) 501, 1210, 1592
BmuI ACTGGG 1 cut(s) 529
BplI GAGNNNNNCTC 2 cut(s) 1401, 1433
Bpu1102I GCTNAGC 1 cut(s) 1301
Bpu14I TTCGAA 1 cut(s) 937
BpuEI CTTGAG 1 cut(s) 1142
BpuMI CCSGG 1 cut(s) 707
BsaBI GATNNNNATC 1 cut(s) 1013
BsaI GGTCTC 2 cut(s) 1702, 1730
BsaJI CCNNGG 4 cut(s) 545, 587, 1089, 1677
BsaWI WCCGGW 1 cut(s) 108
Bsc4I CCNNNNNNNGG 2 cut(s) 593, 1468
Bse1I ACTGG 3 cut(s) 535, 598, 1370
Bse3DI GCAATG 2 cut(s) 27, 1156
Bse8I GATNNNNATC 1 cut(s) 1013
BseBI CCWGG 1 cut(s) 1463
BseDI CCNNGG 4 cut(s) 545, 587, 1089, 1677
BseGI GGATG 3 cut(s) 453, 633, 1146
BseJI GATNNNNATC 1 cut(s) 1013
BseLI CCNNNNNNNGG 2 cut(s) 593, 1468
BseMI GCAATG 2 cut(s) 27, 1156
BseMII CTCAG 4 cut(s) 935, 1292, 1559, 1754
BseNI ACTGG 3 cut(s) 535, 598, 1370
BseRI GAGGAG 1 cut(s) 1106
BseXI GCAGC 1 cut(s) 25
BsgI GTGCAG 2 cut(s) 24, 819
Bsh1236I CGCG 1 cut(s) 887
Bsh1285I CGRYCG 1 cut(s) 1423
BshFI GGCC 2 cut(s) 1023, 1676
BshNI GGYRCC 2 cut(s) 702, 1309
BsiEI CGRYCG 1 cut(s) 1423
BsiHKCI CYCGRG 1 cut(s) 52
BsiSI CCGG 3 cut(s) 109, 706, 821
BsiWI CGTACG 1 cut(s) 1780
BslFI GGGAC 1 cut(s) 945
BslI CCNNNNNNNGG 2 cut(s) 593, 1468
BsmAI GTCTC 4 cut(s) 683, 1548, 1702, 1730
BsmBI CGTCTC 1 cut(s) 1548
BsmFI GGGAC 1 cut(s) 945
BsmI GAATGC 2 cut(s) 564, 1425
BsnI GGCC 2 cut(s) 1023, 1676
Bso31I GGTCTC 2 cut(s) 1702, 1730
BsoBI CYCGRG 1 cut(s) 52
Bsp119I TTCGAA 1 cut(s) 937
Bsp1407I TGTACA 1 cut(s) 630
Bsp143I GATC 7 cut(s) 154, 245, 1153, 1350, 1420, 1558, 1786
Bsp1720I GCTNAGC 1 cut(s) 1301
BspACI CCGC 4 cut(s) 375, 885, 1466, 1469
BspANI GGCC 2 cut(s) 1023, 1676
BspCNI CTCAG 4 cut(s) 936, 1293, 1560, 1753
BspFNI CGCG 1 cut(s) 887
BspHI TCATGA 1 cut(s) 751
BspLI GGNNCC 4 cut(s) 156, 658, 704, 1311
BspPI GGATC 3 cut(s) 149, 162, 1794
BspT104I TTCGAA 1 cut(s) 937
BspT107I GGYRCC 2 cut(s) 702, 1309
BspTI CTTAAG 1 cut(s) 869
BspTNI GGTCTC 2 cut(s) 1702, 1730
BsrBI CCGCTC 1 cut(s) 375
BsrDI GCAATG 2 cut(s) 27, 1156
BsrGI TGTACA 1 cut(s) 630
BsrI ACTGG 3 cut(s) 535, 598, 1370
BssECI CCNNGG 4 cut(s) 545, 587, 1089, 1677
BssMI GATC 7 cut(s) 154, 245, 1153, 1350, 1420, 1558, 1786
BssT1I CCWWGG 2 cut(s) 587, 1677
Bst2UI CCWGG 1 cut(s) 1463
Bst4CI ACNGT 1 cut(s) 749
Bst6I CTCTTC 2 cut(s) 1244, 1436
BstAFI CTTAAG 1 cut(s) 869
BstAUI TGTACA 1 cut(s) 630
BstBI TTCGAA 1 cut(s) 937
BstC8I GCNNGC 4 cut(s) 643, 712, 1025, 1471
BstDEI CTNAG 8 cut(s) 148, 390, 581, 944, 1301, 1319, 1568, 1740
BstF5I GGATG 3 cut(s) 453, 633, 1146
BstFNI CGCG 1 cut(s) 887
BstH2I RGCGCY 1 cut(s) 1476
BstHHI GCGC 1 cut(s) 1475
BstKTI GATC 7 cut(s) 157, 248, 1156, 1353, 1423, 1561, 1789
BstMAI GTCTC 4 cut(s) 683, 1548, 1702, 1730
BstMBI GATC 7 cut(s) 154, 245, 1153, 1350, 1420, 1558, 1786
BstMCI CGRYCG 1 cut(s) 1423
BstMWI GCNNNNNNNGC 2 cut(s) 38, 1472
BstNI CCWGG 1 cut(s) 1463
BstSCI CCNGG 2 cut(s) 705, 1461
BstSFI CTRYAG 1 cut(s) 792
BstUI CGCG 1 cut(s) 887
BstV1I GCAGC 1 cut(s) 25
BstX2I RGATCY 1 cut(s) 154
BstXI CCANNNNNNTGG 1 cut(s) 653
BstYI RGATCY 1 cut(s) 154
BsuRI GGCC 2 cut(s) 1023, 1676
BtsCI GGATG 3 cut(s) 453, 633, 1146
BtsIMutI CAGTG 1 cut(s) 1377
Cac8I GCNNGC 4 cut(s) 643, 712, 1025, 1471
CaiI CAGNNNCTG 1 cut(s) 541
CciI TCATGA 1 cut(s) 751
CfoI GCGC 1 cut(s) 1475
CseI GACGC 1 cut(s) 876
Csp6I GTAC 7 cut(s) 631, 650, 975, 1055, 1187, 1667, 1781
CviAII CATG 8 cut(s) 132, 647, 722, 752, 760, 1291, 1646, 1672
CviQI GTAC 7 cut(s) 631, 650, 975, 1055, 1187, 1667, 1781
DdeI CTNAG 8 cut(s) 148, 390, 581, 944, 1301, 1319, 1568, 1740
DpnI GATC 7 cut(s) 156, 247, 1155, 1352, 1422, 1560, 1788
DpnII GATC 7 cut(s) 154, 245, 1153, 1350, 1420, 1558, 1786
EaeI YGGCCR 1 cut(s) 1674
Eam1104I CTCTTC 2 cut(s) 1244, 1436
EarI CTCTTC 2 cut(s) 1244, 1436
Eco130I CCWWGG 2 cut(s) 587, 1677
Eco31I GGTCTC 2 cut(s) 1702, 1730
Eco32I GATATC 1 cut(s) 259
Eco57I CTGAAG 3 cut(s) 372, 1385, 1517
Eco88I CYCGRG 1 cut(s) 52
EcoRI GAATTC 1 cut(s) 1084
EcoRII CCWGG 1 cut(s) 1461
EcoRV GATATC 1 cut(s) 259
EcoT14I CCWWGG 2 cut(s) 587, 1677
ErhI CCWWGG 2 cut(s) 587, 1677
Esp3I CGTCTC 1 cut(s) 1548
FaeI CATG 8 cut(s) 135, 650, 725, 755, 763, 1294, 1649, 1675
FalI AAGNNNNNCTT 2 cut(s) 72, 104
FaqI GGGAC 1 cut(s) 945
FatI CATG 8 cut(s) 131, 646, 721, 751, 759, 1290, 1645, 1671
FauI CCCGC 1 cut(s) 1462
Fnu4HI GCNGC 2 cut(s) 39, 1467
FokI GGATG 3 cut(s) 440, 620, 1153
Fsp4HI GCNGC 2 cut(s) 39, 1467
FspBI CTAG 4 cut(s) 489, 809, 1124, 1494
GlaI GCGC 1 cut(s) 1474
GluI GCNGC 2 cut(s) 39, 1467
HaeII RGCGCY 1 cut(s) 1476
HaeIII GGCC 2 cut(s) 1023, 1676
HapII CCGG 3 cut(s) 109, 706, 821
HgaI GACGC 1 cut(s) 876
HhaI GCGC 1 cut(s) 1475
Hin1II CATG 8 cut(s) 135, 650, 725, 755, 763, 1294, 1649, 1675
Hin6I GCGC 1 cut(s) 1473
HinP1I GCGC 1 cut(s) 1473
HindIII AAGCTT 2 cut(s) 1316, 1338
HinfI GANTC 5 cut(s) 4, 112, 852, 863, 1594
HpaII CCGG 3 cut(s) 109, 706, 821
HphI GGTGA 3 cut(s) 244, 380, 1553
Hpy188III TCNNGA 7 cut(s) 489, 752, 768, 860, 1159, 1382, 1742
Hpy99I CGWCG 1 cut(s) 1794
HpyAV CCTTC 6 cut(s) 182, 1400, 1436, 1625, 1652, 1747
HpyCH4III ACNGT 1 cut(s) 749
HpyCH4IV ACGT 1 cut(s) 1779
HpyF10VI GCNNNNNNNGC 2 cut(s) 38, 1472
HpyF3I CTNAG 8 cut(s) 148, 390, 581, 944, 1301, 1319, 1568, 1740
HpySE526I ACGT 1 cut(s) 1779
Hsp92II CATG 8 cut(s) 135, 650, 725, 755, 763, 1294, 1649, 1675
HspAI GCGC 1 cut(s) 1473
Kzo9I GATC 7 cut(s) 154, 245, 1153, 1350, 1420, 1558, 1786
LmnI GCTCC 2 cut(s) 17, 656
Lsp1109I GCAGC 1 cut(s) 25
LweI GCATC 3 cut(s) 501, 1210, 1592
MaeI CTAG 4 cut(s) 489, 809, 1124, 1494
MaeII ACGT 1 cut(s) 1779
MaeIII GTNAC 2 cut(s) 229, 404
MalI GATC 7 cut(s) 156, 247, 1155, 1352, 1422, 1560, 1788
MbiI CCGCTC 1 cut(s) 375
MboI GATC 7 cut(s) 154, 245, 1153, 1350, 1420, 1558, 1786
MflI RGATCY 1 cut(s) 154
MlsI TGGCCA 1 cut(s) 1676
MluNI TGGCCA 1 cut(s) 1676
MlyI GAGTC 1 cut(s) 106
MnlI CCTC 5 cut(s) 216, 359, 540, 1084, 1247
Mox20I TGGCCA 1 cut(s) 1676
MroXI GAANNNNTTC 2 cut(s) 911, 1238
MscI TGGCCA 1 cut(s) 1676
MseI TTAA 7 cut(s) 327, 428, 606, 870, 1275, 1448, 1760
MslI CAYNNNNRTG 2 cut(s) 206, 1295
Msp20I TGGCCA 1 cut(s) 1676
MspCI CTTAAG 1 cut(s) 869
MspI CCGG 3 cut(s) 109, 706, 821
MspR9I CCNGG 2 cut(s) 707, 1463
Mva1269I GAATGC 2 cut(s) 564, 1425
MvaI CCWGG 1 cut(s) 1463
MvnI CGCG 1 cut(s) 887
MwoI GCNNNNNNNGC 2 cut(s) 38, 1472
NciI CCSGG 1 cut(s) 707
NdeII GATC 7 cut(s) 154, 245, 1153, 1350, 1420, 1558, 1786
NlaIII CATG 8 cut(s) 135, 650, 725, 755, 763, 1294, 1649, 1675
NlaIV GGNNCC 4 cut(s) 156, 658, 704, 1311
NmeAIII GCCGAG 1 cut(s) 570
NmuCI GTSAC 1 cut(s) 229
NspV TTCGAA 1 cut(s) 937
PagI TCATGA 1 cut(s) 751
PcsI WCGNNNNNNNCGW 1 cut(s) 1789
PctI GAATGC 2 cut(s) 564, 1425
PdmI GAANNNNTTC 2 cut(s) 911, 1238
PfeI GAWTC 4 cut(s) 4, 852, 863, 1594
Pfl23II CGTACG 1 cut(s) 1780
PflMI CCANNNNNTGG 1 cut(s) 593
PkrI GCNGC 2 cut(s) 40, 1468
Ple19I CGATCG 1 cut(s) 1423
PleI GAGTC 1 cut(s) 106
PpsI GAGTC 1 cut(s) 106
PshBI ATTAAT 1 cut(s) 1760
Psp6I CCWGG 1 cut(s) 1461
PspGI CCWGG 1 cut(s) 1461
PspLI CGTACG 1 cut(s) 1780
PspN4I GGNNCC 4 cut(s) 156, 658, 704, 1311
PstNI CAGNNNCTG 1 cut(s) 541
PsuI RGATCY 1 cut(s) 154
PvuI CGATCG 1 cut(s) 1423
RsaI GTAC 7 cut(s) 632, 651, 976, 1056, 1188, 1668, 1782
RsaNI GTAC 7 cut(s) 631, 650, 975, 1055, 1187, 1667, 1781
RseI CAYNNNNRTG 2 cut(s) 206, 1295
SaqAI TTAA 7 cut(s) 327, 428, 606, 870, 1275, 1448, 1760
SatI GCNGC 2 cut(s) 39, 1467
Sau3AI GATC 7 cut(s) 154, 245, 1153, 1350, 1420, 1558, 1786
ScaI AGTACT 1 cut(s) 976
SchI GAGTC 1 cut(s) 106
ScrFI CCNGG 2 cut(s) 707, 1463
SfaNI GCATC 3 cut(s) 501, 1210, 1592
SfcI CTRYAG 1 cut(s) 792
SfuI TTCGAA 1 cut(s) 937
SmiMI CAYNNNNRTG 2 cut(s) 206, 1295
SmlI CTYRAG 2 cut(s) 869, 1157
SmoI CTYRAG 2 cut(s) 869, 1157
SsiI CCGC 4 cut(s) 375, 885, 1466, 1469
SspI AATATT 2 cut(s) 219, 803
SspMI CTAG 4 cut(s) 489, 809, 1124, 1494
StyD4I CCNGG 2 cut(s) 705, 1461
StyI CCWWGG 2 cut(s) 587, 1677
TaaI ACNGT 1 cut(s) 749
TaiI ACGT 1 cut(s) 1782
TaqI TCGA 6 cut(s) 364, 432, 556, 937, 1070, 1419
TatI WGTACW 6 cut(s) 630, 649, 974, 1054, 1186, 1666
TauI GCSGC 1 cut(s) 1469
TfiI GAWTC 4 cut(s) 4, 852, 863, 1594
Tru1I TTAA 7 cut(s) 327, 428, 606, 870, 1275, 1448, 1760
Tru9I TTAA 7 cut(s) 327, 428, 606, 870, 1275, 1448, 1760
TscAI CASTG 1 cut(s) 1377
TseFI GTSAC 1 cut(s) 229
TseI GCWGC 1 cut(s) 38
Tsp45I GTSAC 1 cut(s) 229
TspGWI ACGGA 2 cut(s) 4, 1566
TspRI CASTG 1 cut(s) 1377
Van91I CCANNNNNTGG 1 cut(s) 593
Vha464I CTTAAG 1 cut(s) 869
VspI ATTAAT 1 cut(s) 1760
XapI RAATTY 5 cut(s) 288, 961, 1084, 1106, 1544
XbaI TCTAGA 1 cut(s) 488
XmnI GAANNNNTTC 2 cut(s) 911, 1238
XspI CTAG 4 cut(s) 489, 809, 1124, 1494
ZrmI AGTACT 1 cut(s) 976
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.