MD07G1292700.v1.1

Cyclic nucleotide-gated ion channel 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
OG0000119
Physical Location & Seq
Forward (+)
35409520 .. 35417743
8224 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1292700.v1.1.491

Sequence Viewer

Length: 1770 bp
ATGGTTGGAAAGAAAGCAAATCCAGATATCGAGAAGCAGCCAGTAACATGCGGAAAGGTGATGAGTGCTCCAAATTGGATAACAAAAATAAAGAAGATTTTTGATGATGTGCTTCAGGGGGTGATTTTTGATGTGCATCAGGGGCCTTACCTTCAAATGTGGAACAGTATATTTGTGATCTCATGTGTATTTGCTGTCTCTCTGGATCCTTTGTTCTTTTATGTTGTGAATGTCAATCAGGATGAAAAGTGCCTTCACACGGACAAAAAGTTGGAAATTGTTGCTCTTGTTATGCGATCACTCACGGATGTCATTTTCGTCGTGCATTTGATATGTGAAATTTCATACTCTGTTCAAAAGACAATGGAGAAAAATGAGGAGGTGAAACAAACTTGGGGAAATTCCAGTAAAAAATGGGAAGCCAGAGAGTTGATTCAATATGCCAGGAAAATAGCTCAGAATATGTCGTGGTTATCCGTCATAATTGACGTTTTAGCTCTTGTTCCCCTCCCACAACTGATAATACTAATGTTTTACCCAAAGGAAGGCTCAGGATTTGTGGAAAACACAATGTTTGTGAATGTGTTTCTTCTCGGTCAATATGTTCCGAGGATTTTTCGAATTCACCTGTCGGCCAAGGCATTCAAAATGATGAATGGGATATGGCCTAAGGGTCTATTCAACTTGTTTCTCTACATTCTTGCTGGTCATGTACTCGGAGCTTTTTGGTATTTTTTTTCTATTCAACGAGAGGCATCATGTTGGCACGATGCTTGTGTAAAACTTAGTTATGAATTATGTAATGGCACTTTTTGTGTTGGATGTAAGGACACATTGTACTGCGATAGTGGGCATTCTACAAGAAATATCAGATATCTAAACAAAAGTTGCCCGTTGGATACTCCAGATGATGCTTTATCTCCATTTGACTTTGGAATATTTCTCGATTCCCTTAAAAATGAAAACCCGGATCAAAAGTTCGGCAATAAGTTTTTATACTCTTTCTGGTGGGGCTTGCGAAATCTAAGTAATTTTGGGACAAATCTGGAAACAAGTACGTATTCATGGGAAAACTTGTTTGCGATTTTCATTTCAGTGACTGGCTTGCTACTGTTTTTATATCTTATTGGAAACGTGCAGGCTTTTATGCAGATGGAAGCTACAAAAAAAGAGGAAATGAGACGACAAGGTATAAAAACAACAAAAACAGAGGAAATGAGACGACAAGGTATAAAAACAGAGGAAGCTATAAAAACACTTAAGGAAATACCAATGCTTAAAGACATGGATGAAAAAGTGTTGAAGATGATGTGCGACTATCTAAAGCCAGCGACGTACAGTGAGAACAGCTTCATTTTTCGAACGGGAGATCCACTCGATTGCATGCTGTTGATTATCGAAGGGACAATGTGGACCTACGCGTCGAGTGATAGTCATGCTGGGCAAGGAATCTCATCAATGGGCATCAAGCCCCTCAGGAAAGGTGACTTTTACGGGGAAGAGCTTCTCGATTGGGCATCAGACTTCACCAAAGTTCCAGTCTCCAGCAAACATGTCAAATGTCATACAAAAGTAAAAGCATTTGTGCTCATGGCCGAGGACTTGGGAACTGTAGTCTCCCCAAGACCACATGGGGACTTGCTCAATCGTAACAATGCTGAAGAGGTGAAGGCGACGCTGTCTGCTGCTCTTCGTTCCCATACCAAGGCGGCGCAACGACTTCCGCCTCCGTCCCTGGCTGAAATAGGGGATGACAATAGTGAGAACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
Ion_trans

Protein Analysis

590

Amino Acids

67.1

Weight (kDa)

7.14

Isoelectric Point (pI)

35.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ion_trans PF00520 54 - 384 1.7e-09 Ion transport protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000119)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g10570 FvH4_4g36390 FvH4_7g31840 FvH4_7g31840 FvH4_7g31850 FvH4_7g31850 FvH4_7g31861 FvH4_7g31861 FvH4_7g31950
malus_domestica MD01G1054600.v1.1 MD01G1221100.v1.1 MD01G1221400.v1.1 MD01G1221600.v1.1 MD01G1221800.v1.1 MD01G1222000.v1.1 MD01G1222100.v1.1 MD07G1140800.v1.1 MD07G1291200.v1.1 MD07G1291400.v1.1 MD07G1291500.v1.1 MD07G1291700.v1.1 MD07G1292500.v1.1 MD07G1292700.v1.1 MD07G1292800.v1.1 MD07G1292900.v1.1 MD08G1241600.v1.1 MD11G1083800.v1.1 MD15G1431600.v1.1
prunus_persica Prupe.1G017800_v2.0.a1 Prupe.1G017800_v2.0.a1 Prupe.1G162800_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312700_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G143000_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1
pyrus_communis pycom01g23050 pycom01g23070 pycom01g23090 pycom01g23100 pycom01g23110 pycom01g23120 pycom01g23170 pycom07g26410 pycom07g26440 pycom07g26470 pycom07g26480 pycom07g26490 pycom07g26500 pycom07g26510 pycom07g26530 pycom07g26540 pycom07g26570 pycom07g26580 pycom07g26590 pycom08g20940
rosa_chinensis RchiOBHm_Chr1g0324571 RchiOBHm_Chr1g0336181 RchiOBHm_Chr1g0381061 RchiOBHm_Chr1g0381091 RchiOBHm_Chr1g0381121 RchiOBHm_Chr1g0381131 RchiOBHm_Chr1g0381141 RchiOBHm_Chr1g0381161 RchiOBHm_Chr1g0381211 RchiOBHm_Chr2g0110361 RchiOBHm_Chr2g0120231 RchiOBHm_Chr3g0486281 RchiOBHm_Chr3g0486311 RchiOBHm_Chr3g0486401 RchiOBHm_Chr4g0409511 RchiOBHm_Chr4g0409521 RchiOBHm_Chr5g0017271 RchiOBHm_Chr5g0048781 RchiOBHm_Chr5g0048811
rosa_laevigata RLG00000002401 RLG00000008559 RLG00000017798 RLG00000017799 RLG00000023082 RLG00000023088 RLG00000026230 RLG00000026238 RLG00000026240 RLG00000026241 RLG00000026242 RLG00000026243 RLG00000026244 RLG00000026246 RLG00000026247 RLG00000026248 RLG00000029876 RLG00000030189 RLG00000034579
rosa_multiflora Rmu_co8101374.1_g000001 Rmu_co8309149.1_g000001 Rmu_co8450063.1_g000001 Rmu_sc0000441.1_g000094 Rmu_sc0000479.1_g000005 Rmu_sc0000647.1_g000006 Rmu_sc0001393.1_g000031 Rmu_sc0001423.1_g000037 Rmu_sc0001616.1_g000015 Rmu_sc0001857.1_g000011 Rmu_sc0002183.1_g000013 Rmu_sc0002183.1_g000028 Rmu_sc0002183.1_g000030 Rmu_sc0002688.1_g000003 Rmu_sc0002688.1_g000020 Rmu_sc0003801.1_g000003 Rmu_sc0003801.1_g000004 Rmu_sc0004125.1_g000006 Rmu_sc0004494.1_g000005 Rmu_sc0004494.1_g000006 Rmu_sc0004494.1_g000008 Rmu_sc0004494.1_g000009 Rmu_sc0005842.1_g000004 Rmu_sc0006872.1_g000001 Rmu_sc0006872.1_g000005 Rmu_sc0006872.1_g000009 Rmu_sc0006872.1_g000010 Rmu_sc0008053.1_g000026
rosa_roxburghii Rroxscaffold_159G00432960 Rroxscaffold_1G00033060 Rroxscaffold_2G00123150 Rroxscaffold_2G00123170 Rroxscaffold_2G00133500 Rroxscaffold_2G00133550 Rroxscaffold_4G00278650 Rroxscaffold_4G00278750 Rroxscaffold_4G00278790 Rroxscaffold_4G00278800 Rroxscaffold_4G00278810 Rroxscaffold_4G00325390 Rroxscaffold_5G00354010 Rroxscaffold_6G00395890 Rroxscaffold_6G00395900 Rroxscaffold_6G00395920
rosa_rugosa Rorug01G0046900.1 Rorug01G0427000 Rorug01G0427100 Rorug01G0427200 Rorug01G0427300 Rorug01G0427400 Rorug01G0427500 Rorug01G0427500 Rorug01G0427600 Rorug01G0427600 Rorug01G0427700 Rorug01G0427700 Rorug01G0427800 Rorug01G0428700 Rorug02G0166400 Rorug02G0166500 Rorug02G0166500 Rorug02G0166600 Rorug02G0166600 Rorug02G0166700 Rorug02G0167300 Rorug02G0167300 Rorug02G0167300 Rorug03G0224600 Rorug03G0224600 Rorug04G0094400 Rorug05G0241100 Rorug05G0241200
rosa_samantha Rh1BG407700 Rh1BG407900 Rh1BG409000 Rh1CG064700 Rh1CG420900 Rh1CG421000 Rh1CG421200 Rh1CG421300 Rh1CG421800 Rh1CG421900 Rh1CG422000 Rh1CG422200 Rh1CG422300 Rh1CG423600 Rh1DG437600 Rh1DG438900 Rh1DG439000 Rh1DG440300 Rh2AG219100 Rh2CG220700 Rh2DG225300 Rh3AG274400 Rh3AG274600 Rh3CG308900 Rh3DG305800 Rh4AG156400 Rh5AG129000 Rh5AG320900 Rh5CG139600
rosa_wichuraiana Rw1G005300 Rw1G039280 Rw1G039300 Rw1G039310 Rw1G039320 Rw1G039330 Rw1G039340 Rw1G039360 Rw1G039390 Rw2G016910 Rw2G022800 Rw3G024330 Rw3G024340 Rw3G024350 Rw3G024400 Rw4G012810 Rw5G030120 Rw5G030280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1420
AccII CGCG 1 cut(s) 1421
AciI CCGC 3 cut(s) 51, 1709, 1724
AclWI GGATC 4 cut(s) 200, 213, 978, 1364
AcoI YGGCCR 2 cut(s) 633, 1593
AcsI RAATTY 3 cut(s) 339, 400, 621
AcuI CTGAAG 2 cut(s) 98, 1680
AfaI GTAC 4 cut(s) 714, 839, 1057, 1337
AfiI CCNNNNNNNGG 3 cut(s) 259, 545, 1705
AflII CTTAAG 1 cut(s) 1259
AflIII ACRYGT 2 cut(s) 1419, 1552
AgsI TTSAA 7 cut(s) 155, 356, 437, 646, 682, 746, 1303
AjnI CCWGG 2 cut(s) 443, 1734
AloI GAACNNNNNNTCC 6 cut(s) 197, 229, 962, 994, 1354, 1386
AluBI AGCT 7 cut(s) 455, 497, 722, 1160, 1247, 1350, 1504
AluI AGCT 7 cut(s) 455, 497, 722, 1160, 1247, 1350, 1504
Alw21I GWGCWC 2 cut(s) 70, 1590
Alw26I GTCTC 5 cut(s) 202, 1174, 1213, 1546, 1621
AlwI GGATC 4 cut(s) 200, 213, 978, 1364
AlwNI CAGNNNCTG 1 cut(s) 1100
AoxI GGCC 4 cut(s) 143, 633, 665, 1593
ApeKI GCWGC 2 cut(s) 37, 1685
ApoI RAATTY 3 cut(s) 339, 400, 621
ArsI GACNNNNNNTTYG 2 cut(s) 1524, 1556
Asp700I GAANNNNTTC 2 cut(s) 1349, 1503
AspLEI GCGC 1 cut(s) 1714
AspS9I GGNCC 2 cut(s) 143, 1413
AsuC2I CCSGG 1 cut(s) 968
AsuHPI GGTGA 7 cut(s) 70, 133, 394, 617, 1496, 1519, 1678
AsuII TTCGAA 2 cut(s) 619, 1360
AvaII GGWCC 1 cut(s) 1413
AxyI CCTNAGG 2 cut(s) 669, 1475
BamHI GGATCC 1 cut(s) 205
Bbv12I GWGCWC 2 cut(s) 70, 1590
BbvI GCAGC 2 cut(s) 49, 1672
BccI CCATC 1 cut(s) 1147
BciT130I CCWGG 2 cut(s) 445, 1736
BciVI GTATCC 1 cut(s) 892
BcnI CCSGG 1 cut(s) 968
BcoDI GTCTC 5 cut(s) 202, 1174, 1213, 1546, 1621
BfaI CTAG 1 cut(s) 1768
BfmI CTRYAG 1 cut(s) 1611
BfrI CTTAAG 1 cut(s) 1259
BfuI GTATCC 1 cut(s) 892
BisI GCNGC 3 cut(s) 38, 1686, 1710
BlsI GCNGC 3 cut(s) 39, 1687, 1711
Bme1390I CCNGG 3 cut(s) 445, 968, 1736
Bme18I GGWCC 1 cut(s) 1413
BmgT120I GGNCC 2 cut(s) 143, 1413
BmiI GGNNCC 2 cut(s) 144, 207
BmrFI CCNGG 3 cut(s) 445, 968, 1736
BmsI GCATC 6 cut(s) 145, 760, 764, 901, 1473, 1526
BplI GAGNNNNNCTC 2 cut(s) 1359, 1391
BpmI CTGGAG 2 cut(s) 888, 1528
Bpu10I CCTNAGC 1 cut(s) 550
Bpu14I TTCGAA 2 cut(s) 619, 1360
BpuMI CCSGG 1 cut(s) 968
BsaAI YACGTR 1 cut(s) 1059
BsaBI GATNNNNATC 1 cut(s) 135
BsaJI CCNNGG 5 cut(s) 608, 636, 1596, 1704, 1734
Bsc4I CCNNNNNNNGG 3 cut(s) 259, 545, 1705
Bse1I ACTGG 4 cut(s) 41, 405, 1105, 1538
Bse21I CCTNAGG 2 cut(s) 669, 1475
Bse8I GATNNNNATC 1 cut(s) 135
BseBI CCWGG 2 cut(s) 445, 1736
BseDI CCNNGG 5 cut(s) 608, 636, 1596, 1704, 1734
BseGI GGATG 5 cut(s) 247, 313, 827, 1294, 1756
BseJI GATNNNNATC 1 cut(s) 135
BseLI CCNNNNNNNGG 3 cut(s) 259, 545, 1705
BseMII CTCAG 3 cut(s) 470, 564, 1489
BseNI ACTGG 4 cut(s) 41, 405, 1105, 1538
BseRI GAGGAG 1 cut(s) 392
BseXI GCAGC 2 cut(s) 49, 1672
BseYI CCCAGC 1 cut(s) 1439
BsgI GTGCAG 1 cut(s) 1157
Bsh1236I CGCG 1 cut(s) 1421
BshFI GGCC 4 cut(s) 145, 635, 667, 1595
BsiHKAI GWGCWC 2 cut(s) 70, 1590
BsiSI CCGG 1 cut(s) 968
BslFI GGGAC 4 cut(s) 1051, 1417, 1649, 1717
BslI CCNNNNNNNGG 3 cut(s) 259, 545, 1705
BsmAI GTCTC 5 cut(s) 202, 1174, 1213, 1546, 1621
BsmBI CGTCTC 2 cut(s) 1174, 1213
BsmFI GGGAC 4 cut(s) 1051, 1417, 1649, 1717
BsmI GAATGC 2 cut(s) 641, 853
BsnI GGCC 4 cut(s) 145, 635, 667, 1595
Bsp119I TTCGAA 2 cut(s) 619, 1360
Bsp1286I GDGCHC 2 cut(s) 70, 1590
Bsp143I GATC 5 cut(s) 177, 205, 296, 970, 1369
BspACI CCGC 3 cut(s) 51, 1709, 1724
BspANI GGCC 4 cut(s) 145, 635, 667, 1595
BspCNI CTCAG 3 cut(s) 469, 563, 1488
BspFNI CGCG 1 cut(s) 1421
BspLI GGNNCC 2 cut(s) 144, 207
BspPI GGATC 4 cut(s) 200, 213, 978, 1364
BspQI GCTCTTC 2 cut(s) 1494, 1695
BspT104I TTCGAA 2 cut(s) 619, 1360
BspTI CTTAAG 1 cut(s) 1259
BsrI ACTGG 4 cut(s) 41, 405, 1105, 1538
BssECI CCNNGG 5 cut(s) 608, 636, 1596, 1704, 1734
BssMI GATC 5 cut(s) 177, 205, 296, 970, 1369
BssT1I CCWWGG 2 cut(s) 636, 1704
Bst2UI CCWGG 2 cut(s) 445, 1736
Bst4CI ACNGT 4 cut(s) 167, 1113, 1340, 1612
Bst6I CTCTTC 3 cut(s) 1494, 1656, 1695
BstAFI CTTAAG 1 cut(s) 1259
BstBAI YACGTR 1 cut(s) 1059
BstBI TTCGAA 2 cut(s) 619, 1360
BstC8I GCNNGC 5 cut(s) 1016, 1106, 1140, 1329, 1385
BstDEI CTNAG 6 cut(s) 456, 550, 669, 785, 1025, 1475
BstF5I GGATG 5 cut(s) 247, 313, 827, 1294, 1756
BstFNI CGCG 1 cut(s) 1421
BstHHI GCGC 1 cut(s) 1714
BstKTI GATC 5 cut(s) 180, 208, 299, 973, 1372
BstMAI GTCTC 5 cut(s) 202, 1174, 1213, 1546, 1621
BstMBI GATC 5 cut(s) 177, 205, 296, 970, 1369
BstMWI GCNNNNNNNGC 1 cut(s) 142
BstNI CCWGG 2 cut(s) 445, 1736
BstNSI RCATGY 3 cut(s) 51, 1387, 1556
BstSCI CCNGG 3 cut(s) 443, 966, 1734
BstSFI CTRYAG 1 cut(s) 1611
BstSNI TACGTA 1 cut(s) 1059
BstUI CGCG 1 cut(s) 1421
BstV1I GCAGC 2 cut(s) 49, 1672
BstX2I RGATCY 2 cut(s) 205, 1369
BstYI RGATCY 2 cut(s) 205, 1369
Bsu36I CCTNAGG 2 cut(s) 669, 1475
BsuI GTATCC 1 cut(s) 892
BsuRI GGCC 4 cut(s) 145, 635, 667, 1595
BtsCI GGATG 5 cut(s) 247, 313, 827, 1294, 1756
BtsIMutI CAGTG 2 cut(s) 1101, 1345
Cac8I GCNNGC 5 cut(s) 1016, 1106, 1140, 1329, 1385
CaiI CAGNNNCTG 1 cut(s) 1100
CfoI GCGC 1 cut(s) 1714
Cfr13I GGNCC 2 cut(s) 143, 1413
CseI GACGC 2 cut(s) 1410, 1684
Csp6I GTAC 4 cut(s) 713, 838, 1056, 1336
CviQI GTAC 4 cut(s) 713, 838, 1056, 1336
DdeI CTNAG 6 cut(s) 456, 550, 669, 785, 1025, 1475
DpnI GATC 5 cut(s) 179, 207, 298, 972, 1371
DpnII GATC 5 cut(s) 177, 205, 296, 970, 1369
DrdI GACNNNNNNGTC 1 cut(s) 1420
DseDI GACNNNNNNGTC 1 cut(s) 1420
EaeI YGGCCR 2 cut(s) 633, 1593
Eam1104I CTCTTC 3 cut(s) 1494, 1656, 1695
EarI CTCTTC 3 cut(s) 1494, 1656, 1695
EciI GGCGGA 1 cut(s) 1713
Eco105I TACGTA 1 cut(s) 1059
Eco130I CCWWGG 2 cut(s) 636, 1704
Eco32I GATATC 2 cut(s) 28, 875
Eco47I GGWCC 1 cut(s) 1413
Eco57I CTGAAG 2 cut(s) 98, 1680
Eco81I CCTNAGG 2 cut(s) 669, 1475
EcoO109I RGGNCCY 1 cut(s) 143
EcoRI GAATTC 1 cut(s) 621
EcoRII CCWGG 2 cut(s) 443, 1734
EcoRV GATATC 2 cut(s) 28, 875
EcoT14I CCWWGG 2 cut(s) 636, 1704
ErhI CCWWGG 2 cut(s) 636, 1704
Esp3I CGTCTC 2 cut(s) 1174, 1213
FaqI GGGAC 4 cut(s) 1051, 1417, 1649, 1717
Fnu4HI GCNGC 3 cut(s) 38, 1686, 1710
FokI GGATG 5 cut(s) 254, 320, 834, 1301, 1763
Fsp4HI GCNGC 3 cut(s) 38, 1686, 1710
FspBI CTAG 1 cut(s) 1768
GlaI GCGC 1 cut(s) 1713
GluI GCNGC 3 cut(s) 38, 1686, 1710
GsaI CCCAGC 1 cut(s) 1443
GsuI CTGGAG 2 cut(s) 888, 1528
HaeIII GGCC 4 cut(s) 145, 635, 667, 1595
HapII CCGG 1 cut(s) 968
HgaI GACGC 2 cut(s) 1410, 1684
HhaI GCGC 1 cut(s) 1714
Hin6I GCGC 1 cut(s) 1712
HinP1I GCGC 1 cut(s) 1712
HinfI GANTC 3 cut(s) 433, 947, 1449
HpaII CCGG 1 cut(s) 968
HphI GGTGA 7 cut(s) 70, 133, 394, 617, 1496, 1519, 1678
Hpy166II GTNNAC 1 cut(s) 1413
Hpy188I TCNGA 5 cut(s) 459, 609, 719, 872, 1522
Hpy8I GTNNAC 1 cut(s) 1413
Hpy99I CGWCG 4 cut(s) 323, 1336, 1426, 1678
HpyAV CCTTC 5 cut(s) 161, 263, 539, 1394, 1663
HpyCH4III ACNGT 4 cut(s) 167, 1113, 1340, 1612
HpyCH4IV ACGT 4 cut(s) 489, 1058, 1134, 1334
HpyCH4V TGCA 5 cut(s) 136, 325, 1138, 1150, 1383
HpyF10VI GCNNNNNNNGC 1 cut(s) 142
HpyF3I CTNAG 6 cut(s) 456, 550, 669, 785, 1025, 1475
HpySE526I ACGT 4 cut(s) 489, 1058, 1134, 1334
HspAI GCGC 1 cut(s) 1712
Kzo9I GATC 5 cut(s) 177, 205, 296, 970, 1369
LguI GCTCTTC 2 cut(s) 1494, 1695
LmnI GCTCC 2 cut(s) 73, 719
Lsp1109I GCAGC 2 cut(s) 49, 1672
LweI GCATC 6 cut(s) 145, 760, 764, 901, 1473, 1526
MaeI CTAG 1 cut(s) 1768
MaeII ACGT 4 cut(s) 489, 1058, 1134, 1334
MaeIII GTNAC 4 cut(s) 43, 1096, 1484, 1649
MalI GATC 5 cut(s) 179, 207, 298, 972, 1371
MboI GATC 5 cut(s) 177, 205, 296, 970, 1369
MboII GAAGA 6 cut(s) 106, 581, 1315, 1511, 1673, 1682
MflI RGATCY 2 cut(s) 205, 1369
MhlI GDGCHC 2 cut(s) 70, 1590
MluCI AATT 8 cut(s) 73, 276, 339, 400, 483, 621, 794, 1030
MluI ACGCGT 1 cut(s) 1419
MmeI TCCRAC 3 cut(s) 252, 799, 876
MroXI GAANNNNTTC 2 cut(s) 1349, 1503
MseI TTAA 3 cut(s) 954, 1260, 1278
MslI CAYNNNNRTG 1 cut(s) 1094
MspCI CTTAAG 1 cut(s) 1259
MspI CCGG 1 cut(s) 968
MspR9I CCNGG 3 cut(s) 445, 968, 1736
Mva1269I GAATGC 2 cut(s) 641, 853
MvaI CCWGG 2 cut(s) 445, 1736
MvnI CGCG 1 cut(s) 1421
MwoI GCNNNNNNNGC 1 cut(s) 142
NciI CCSGG 1 cut(s) 968
NdeII GATC 5 cut(s) 177, 205, 296, 970, 1369
NlaIV GGNNCC 2 cut(s) 144, 207
NmeAIII GCCGAG 1 cut(s) 1621
NmuCI GTSAC 2 cut(s) 1096, 1484
NspI RCATGY 3 cut(s) 51, 1387, 1556
NspV TTCGAA 2 cut(s) 619, 1360
PaeI GCATGC 1 cut(s) 1387
PciI ACATGT 1 cut(s) 1552
PciSI GCTCTTC 2 cut(s) 1494, 1695
PctI GAATGC 2 cut(s) 641, 853
PdmI GAANNNNTTC 2 cut(s) 1349, 1503
PfeI GAWTC 3 cut(s) 433, 947, 1449
PflFI GACNNNGTC 1 cut(s) 1678
PkrI GCNGC 3 cut(s) 39, 1687, 1711
Ppu21I YACGTR 1 cut(s) 1059
PscI ACATGT 1 cut(s) 1552
Psp6I CCWGG 2 cut(s) 443, 1734
PspFI CCCAGC 1 cut(s) 1439
PspGI CCWGG 2 cut(s) 443, 1734
PspN4I GGNNCC 2 cut(s) 144, 207
PspPI GGNCC 2 cut(s) 143, 1413
PstNI CAGNNNCTG 1 cut(s) 1100
PsuI RGATCY 2 cut(s) 205, 1369
PsyI GACNNNGTC 1 cut(s) 1678
RsaI GTAC 4 cut(s) 714, 839, 1057, 1337
RsaNI GTAC 4 cut(s) 713, 838, 1056, 1336
RseI CAYNNNNRTG 1 cut(s) 1094
SapI GCTCTTC 2 cut(s) 1494, 1695
SaqAI TTAA 3 cut(s) 954, 1260, 1278
SatI GCNGC 3 cut(s) 38, 1686, 1710
Sau3AI GATC 5 cut(s) 177, 205, 296, 970, 1369
Sau96I GGNCC 2 cut(s) 143, 1413
ScrFI CCNGG 3 cut(s) 445, 968, 1736
SduI GDGCHC 2 cut(s) 70, 1590
SfaNI GCATC 6 cut(s) 145, 760, 764, 901, 1473, 1526
SfcI CTRYAG 1 cut(s) 1611
SfuI TTCGAA 2 cut(s) 619, 1360
SinI GGWCC 1 cut(s) 1413
SmiMI CAYNNNNRTG 1 cut(s) 1094
SmlI CTYRAG 1 cut(s) 1259
SmoI CTYRAG 1 cut(s) 1259
SnaBI TACGTA 1 cut(s) 1059
SphI GCATGC 1 cut(s) 1387
Sse9I AATT 8 cut(s) 73, 276, 339, 400, 483, 621, 794, 1030
SsiI CCGC 3 cut(s) 51, 1709, 1724
SspI AATATT 1 cut(s) 939
SspMI CTAG 1 cut(s) 1768
StyD4I CCNGG 3 cut(s) 443, 966, 1734
StyI CCWWGG 2 cut(s) 636, 1704
TaaI ACNGT 4 cut(s) 167, 1113, 1340, 1612
TaiI ACGT 4 cut(s) 492, 1061, 1137, 1337
TaqI TCGA 8 cut(s) 30, 619, 945, 1360, 1377, 1398, 1424, 1509
TaqII GACCGA 1 cut(s) 584
TasI AATT 8 cut(s) 73, 276, 339, 400, 483, 621, 794, 1030
TatI WGTACW 2 cut(s) 712, 837
TauI GCSGC 1 cut(s) 1712
TfiI GAWTC 3 cut(s) 433, 947, 1449
Tru1I TTAA 3 cut(s) 954, 1260, 1278
Tru9I TTAA 3 cut(s) 954, 1260, 1278
TscAI CASTG 2 cut(s) 1101, 1345
TseFI GTSAC 2 cut(s) 1096, 1484
TseI GCWGC 2 cut(s) 37, 1685
Tsp45I GTSAC 2 cut(s) 1096, 1484
TspDTI ATGAA 9 cut(s) 258, 333, 668, 807, 975, 1053, 1078, 1305, 1342
TspGWI ACGGA 4 cut(s) 275, 320, 466, 1719
TspRI CASTG 2 cut(s) 1101, 1345
Tth111I GACNNNGTC 1 cut(s) 1678
Vha464I CTTAAG 1 cut(s) 1259
VpaK11BI GGWCC 1 cut(s) 1413
XapI RAATTY 3 cut(s) 339, 400, 621
XceI RCATGY 3 cut(s) 51, 1387, 1556
XmnI GAANNNNTTC 2 cut(s) 1349, 1503
XspI CTAG 1 cut(s) 1768
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.