Prupe.2G312700_v2.0.a1

Cyclic nucleotide-gated ion channel 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0000119
Physical Location & Seq
Reverse (-)
29504818 .. 29508416
3599 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G312700.1

Sequence Viewer

Length: 1911 bp
ATGGGTAGCATCACAGTAGCTGCAGATCCGGAGAACCTGACAGACAAAACAGATGGTCCAGTTAAAACGCGGATGTATGCCATAATGAAGAAAATATGTCATCCAGAGGGGCAATACCGTCATATATGGACTAAGATATTTGTAACATCATGTGTGTTTGGTGTCTCACTGGACCCTTTGTTCTTTTATATTCTAATCATCGATCAACAAAACAAGTGCCTTCAAATGGACACAATGTTGCAGACTGTTGCTCTTCTTTTACGATCATTCACAGATATCATTTTCTTGGTGCATTTCATATATGAAATCTGTGACGGTGTCAAAACTCAAAGGGCGAAAAAGTCATATGGTGCTAATTTGGCCTCAAATGCCCTTAAAAATATGGCCCCAACCCCAAATACCCAGAAAAATGGACCTTCCACCAATTCCAAAGTCATTCGAGTTGCCAAGAAAATAGCTCACAAGATGTCGTGGTTATCTGCCTCCATCGTAGTTGAATTTTTCGCTCTTCTTCCCATCCCTCAGCTGCTAATAGTAGTCACTTTTTACAATATGAGAGGCTCCCCGTATTTTGAACATGAAAAGGTTTTGAATTTCTTTCTCCTTGGTCAATATATACCAAGAATATTGCGAATTCACATGTCGTCCAAACAACTTCGAAGGACTAATGAAATGTGGATTAAAGGTCTATTCTATTTTTATCTCTACATTCTTACCAGTCACATACTCGGAGCGTTGTGGTACTTTTTTTCAATTCAACGAGAAATGTCATGTTGGCATTGGGCTTGTGTAAATTATAGTACAGATCCCTCAGGATGTATGGATACTTTCTACTGCAACAGTCGGATTGTGTCAAGAAATGTCACATTTCTAAATGAGCATTGCCCGACAGATACTCCAGATAGTGCTTCAGCGCCTTTCAATTTTGGGATATTTCTTGATGCCCTTAAGAACAACAACACAGCGCATGTAGAATTCTCAACGAAGGCTCTTTACTGTTTTTGGTGGGGCCTTCGGAATATAAGTAATTTTGGCACCAATCTCACAACAAGCACTTATATGTGGGAAAACGTTTTTGCAATCCTTATTTCTATCAGTAGCTTCCTACTGATTTTATATGTGATGGGAACTGCGCAGAATAATATGGCAATGCAAGATTCAATGAGAATTGCAAAGTCAGAGAAGATTATGACGAAGAAGCTAGATATACTAAGCTGGTTATCCACAAAGGACCTCCCTCGAGATCTAAAGAAAGAAATAAAGCATAACATAAAGCAAAAATTGGAAGAGCACGATAAAACTTTTCCCCAGAATGATCTATTCTCTATTCTTCCCGTGGAAACTAGAAAATCTCTAAGGCGTTGTCTTTGCATGGAACCACTGAGGACGGTCAAAATGCTTAAAGATATGGATGAAAGGGTGTTGCATTTGATGTGCGACCATCTGAAGCATGTGACGTATAACGAAAATAGCTTCGTTTTTCGGAAGGGAGATCCACTGGATTGCATGTTCTTCATTGTCGAAGGGAATGTGTGGACCTACTCGACTGCTGGTGAGAATGAAGCTGGAAAAGCAACCCCATCATCAATGACAATGGCCACCAAGACGCTTGAGAAAGGTCACATTTATGGGGAAGAGCTTCTCAATTGGGCATCAGACAACTTCACGGAACTTCCACTCTGCCGTCAACATGTCAAAAGTCAGACAAAAGTGGATGCCTTTGTTCTTATGGCCAGGGACTTGGCAACTGTAGTCTCCAGATACCAACTACTGTGGAACTTCAACAAATGTAACATTCCTCAAGAGGTGAAGGAGGTGGCTGCTTCTACCATATTGCGCCGTTTCCGCCATAACCAAAGATTGATGATGTCGCGTCGTCTAGCCGTAAATTATTATTTGAAGAAACGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
Ion_trans cNMP_binding

Protein Analysis

637

Amino Acids

73.75

Weight (kDa)

9.27

Isoelectric Point (pI)

44.47

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000119)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g10570 FvH4_4g36390 FvH4_7g31840 FvH4_7g31840 FvH4_7g31850 FvH4_7g31850 FvH4_7g31861 FvH4_7g31861 FvH4_7g31950
malus_domestica MD01G1054600.v1.1 MD01G1221100.v1.1 MD01G1221400.v1.1 MD01G1221600.v1.1 MD01G1221800.v1.1 MD01G1222000.v1.1 MD01G1222100.v1.1 MD07G1140800.v1.1 MD07G1291200.v1.1 MD07G1291400.v1.1 MD07G1291500.v1.1 MD07G1291700.v1.1 MD07G1292500.v1.1 MD07G1292700.v1.1 MD07G1292800.v1.1 MD07G1292900.v1.1 MD08G1241600.v1.1 MD11G1083800.v1.1 MD15G1431600.v1.1
prunus_persica Prupe.1G017800_v2.0.a1 Prupe.1G017800_v2.0.a1 Prupe.1G162800_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312700_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G143000_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1
pyrus_communis pycom01g23050 pycom01g23070 pycom01g23090 pycom01g23100 pycom01g23110 pycom01g23120 pycom01g23170 pycom07g26410 pycom07g26440 pycom07g26470 pycom07g26480 pycom07g26490 pycom07g26500 pycom07g26510 pycom07g26530 pycom07g26540 pycom07g26570 pycom07g26580 pycom07g26590 pycom08g20940
rosa_chinensis RchiOBHm_Chr1g0324571 RchiOBHm_Chr1g0336181 RchiOBHm_Chr1g0381061 RchiOBHm_Chr1g0381091 RchiOBHm_Chr1g0381121 RchiOBHm_Chr1g0381131 RchiOBHm_Chr1g0381141 RchiOBHm_Chr1g0381161 RchiOBHm_Chr1g0381211 RchiOBHm_Chr2g0110361 RchiOBHm_Chr2g0120231 RchiOBHm_Chr3g0486281 RchiOBHm_Chr3g0486311 RchiOBHm_Chr3g0486401 RchiOBHm_Chr4g0409511 RchiOBHm_Chr4g0409521 RchiOBHm_Chr5g0017271 RchiOBHm_Chr5g0048781 RchiOBHm_Chr5g0048811
rosa_laevigata RLG00000002401 RLG00000008559 RLG00000017798 RLG00000017799 RLG00000023082 RLG00000023088 RLG00000026230 RLG00000026238 RLG00000026240 RLG00000026241 RLG00000026242 RLG00000026243 RLG00000026244 RLG00000026246 RLG00000026247 RLG00000026248 RLG00000029876 RLG00000030189 RLG00000034579
rosa_multiflora Rmu_co8101374.1_g000001 Rmu_co8309149.1_g000001 Rmu_co8450063.1_g000001 Rmu_sc0000441.1_g000094 Rmu_sc0000479.1_g000005 Rmu_sc0000647.1_g000006 Rmu_sc0001393.1_g000031 Rmu_sc0001423.1_g000037 Rmu_sc0001616.1_g000015 Rmu_sc0001857.1_g000011 Rmu_sc0002183.1_g000013 Rmu_sc0002183.1_g000028 Rmu_sc0002183.1_g000030 Rmu_sc0002688.1_g000003 Rmu_sc0002688.1_g000020 Rmu_sc0003801.1_g000003 Rmu_sc0003801.1_g000004 Rmu_sc0004125.1_g000006 Rmu_sc0004494.1_g000005 Rmu_sc0004494.1_g000006 Rmu_sc0004494.1_g000008 Rmu_sc0004494.1_g000009 Rmu_sc0005842.1_g000004 Rmu_sc0006872.1_g000001 Rmu_sc0006872.1_g000005 Rmu_sc0006872.1_g000009 Rmu_sc0006872.1_g000010 Rmu_sc0008053.1_g000026
rosa_roxburghii Rroxscaffold_159G00432960 Rroxscaffold_1G00033060 Rroxscaffold_2G00123150 Rroxscaffold_2G00123170 Rroxscaffold_2G00133500 Rroxscaffold_2G00133550 Rroxscaffold_4G00278650 Rroxscaffold_4G00278750 Rroxscaffold_4G00278790 Rroxscaffold_4G00278800 Rroxscaffold_4G00278810 Rroxscaffold_4G00325390 Rroxscaffold_5G00354010 Rroxscaffold_6G00395890 Rroxscaffold_6G00395900 Rroxscaffold_6G00395920
rosa_rugosa Rorug01G0046900.1 Rorug01G0427000 Rorug01G0427100 Rorug01G0427200 Rorug01G0427300 Rorug01G0427400 Rorug01G0427500 Rorug01G0427500 Rorug01G0427600 Rorug01G0427600 Rorug01G0427700 Rorug01G0427700 Rorug01G0427800 Rorug01G0428700 Rorug02G0166400 Rorug02G0166500 Rorug02G0166500 Rorug02G0166600 Rorug02G0166600 Rorug02G0166700 Rorug02G0167300 Rorug02G0167300 Rorug02G0167300 Rorug03G0224600 Rorug03G0224600 Rorug04G0094400 Rorug05G0241100 Rorug05G0241200
rosa_samantha Rh1BG407700 Rh1BG407900 Rh1BG409000 Rh1CG064700 Rh1CG420900 Rh1CG421000 Rh1CG421200 Rh1CG421300 Rh1CG421800 Rh1CG421900 Rh1CG422000 Rh1CG422200 Rh1CG422300 Rh1CG423600 Rh1DG437600 Rh1DG438900 Rh1DG439000 Rh1DG440300 Rh2AG219100 Rh2CG220700 Rh2DG225300 Rh3AG274400 Rh3AG274600 Rh3CG308900 Rh3DG305800 Rh4AG156400 Rh5AG129000 Rh5AG320900 Rh5CG139600
rosa_wichuraiana Rw1G005300 Rw1G039280 Rw1G039300 Rw1G039310 Rw1G039320 Rw1G039330 Rw1G039340 Rw1G039360 Rw1G039390 Rw2G016910 Rw2G022800 Rw3G024330 Rw3G024340 Rw3G024350 Rw3G024400 Rw4G012810 Rw5G030120 Rw5G030280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1134
AccB1I GGYRCC 1 cut(s) 1034
AccII CGCG 2 cut(s) 70, 1873
AccIII TCCGGA 1 cut(s) 28
AciI CCGC 2 cut(s) 70, 1846
AclI AACGTT 2 cut(s) 1071, 1906
AclWI GGATC 3 cut(s) 20, 800, 1487
AcoI YGGCCR 2 cut(s) 1596, 1731
AcsI RAATTY 4 cut(s) 497, 592, 633, 974
AcuI CTGAAG 2 cut(s) 894, 1466
AfaI GTAC 2 cut(s) 743, 802
AfiI CCNNNNNNNGG 1 cut(s) 226
AflII CTTAAG 1 cut(s) 947
AflIII ACRYGT 2 cut(s) 639, 1690
AjnI CCWGG 1 cut(s) 1733
AloI GAACNNNNNNTCC 4 cut(s) 164, 196, 1493, 1525
AluBI AGCT 9 cut(s) 20, 458, 526, 1101, 1201, 1215, 1473, 1565, 1639
AluI AGCT 9 cut(s) 20, 458, 526, 1101, 1201, 1215, 1473, 1565, 1639
Alw21I GWGCWC 1 cut(s) 1293
Alw26I GTCTC 2 cut(s) 169, 1759
AlwI GGATC 3 cut(s) 20, 800, 1487
AlwNI CAGNNNCTG 1 cut(s) 20
Ama87I CYCGRG 1 cut(s) 1239
Aor13HI TCCGGA 1 cut(s) 28
AoxI GGCC 5 cut(s) 360, 384, 1009, 1596, 1731
ApeKI GCWGC 3 cut(s) 20, 526, 1820
ApoI RAATTY 4 cut(s) 497, 592, 633, 974
Asp700I GAANNNNTTC 1 cut(s) 1638
AspLEI GCGC 4 cut(s) 916, 967, 1135, 1839
AspS9I GGNCC 7 cut(s) 56, 172, 385, 413, 1009, 1231, 1536
AsuHPI GGTGA 2 cut(s) 1565, 1819
AsuII TTCGAA 1 cut(s) 658
AvaI CYCGRG 1 cut(s) 1239
AvaII GGWCC 5 cut(s) 56, 172, 413, 1231, 1536
AxyI CCTNAGG 1 cut(s) 811
BalI TGGCCA 2 cut(s) 1598, 1733
BanI GGYRCC 1 cut(s) 1034
BarI GAAGNNNNNNTAC 2 cut(s) 977, 1009
Bbv12I GWGCWC 1 cut(s) 1293
BbvCI CCTCAGC 1 cut(s) 522
BbvI GCAGC 3 cut(s) 7, 513, 1807
BccI CCATC 6 cut(s) 47, 494, 524, 1117, 1449, 1588
BceAI ACGGC 3 cut(s) 1668, 1824, 1868
BciT130I CCWGG 1 cut(s) 1735
BciVI GTATCC 1 cut(s) 817
BcoDI GTCTC 2 cut(s) 169, 1759
BfaI CTAG 3 cut(s) 1202, 1344, 1880
BfmI CTRYAG 2 cut(s) 21, 1749
BfoI RGCGCY 1 cut(s) 917
BfrI CTTAAG 1 cut(s) 947
BfuI GTATCC 1 cut(s) 817
BglII AGATCT 1 cut(s) 1243
BisI GCNGC 3 cut(s) 21, 527, 1821
BlsI GCNGC 3 cut(s) 22, 528, 1822
Bme1390I CCNGG 1 cut(s) 1735
Bme18I GGWCC 5 cut(s) 56, 172, 413, 1231, 1536
BmeT110I CYCGRG 1 cut(s) 1239
BmgT120I GGNCC 7 cut(s) 56, 172, 385, 413, 1009, 1231, 1536
BmiI GGNNCC 6 cut(s) 174, 387, 562, 1010, 1036, 1377
BmrFI CCNGG 1 cut(s) 1735
BmsI GCATC 4 cut(s) 18, 931, 1661, 1705
BpmI CTGGAG 2 cut(s) 882, 1741
Bpu10I CCTNAGC 1 cut(s) 522
Bpu14I TTCGAA 1 cut(s) 658
BpuEI CTTGAG 2 cut(s) 1631, 1785
Bsa29I ATCGAT 1 cut(s) 201
BsaJI CCNNGG 3 cut(s) 604, 1335, 1734
BsaWI WCCGGW 1 cut(s) 28
BsaXI ACNNNNNCTCC 2 cut(s) 880, 910
Bsc4I CCNNNNNNNGG 1 cut(s) 226
Bse1I ACTGG 4 cut(s) 59, 174, 717, 1503
Bse21I CCTNAGG 1 cut(s) 811
Bse3DI GCAATG 2 cut(s) 880, 1155
BseAI TCCGGA 1 cut(s) 28
BseBI CCWGG 1 cut(s) 1735
BseCI ATCGAT 1 cut(s) 201
BseDI CCNNGG 3 cut(s) 604, 1335, 1734
BseGI GGATG 6 cut(s) 78, 100, 516, 821, 1417, 1720
BseLI CCNNNNNNNGG 1 cut(s) 226
BseMI GCAATG 2 cut(s) 880, 1155
BseMII CTCAG 3 cut(s) 536, 825, 1373
BseNI ACTGG 4 cut(s) 59, 174, 717, 1503
BseXI GCAGC 3 cut(s) 7, 513, 1807
Bsh1236I CGCG 2 cut(s) 70, 1873
BshFI GGCC 5 cut(s) 362, 386, 1011, 1598, 1733
BshNI GGYRCC 1 cut(s) 1034
BshVI ATCGAT 1 cut(s) 201
BsiHKAI GWGCWC 1 cut(s) 1293
BsiHKCI CYCGRG 1 cut(s) 1239
BsiSI CCGG 1 cut(s) 29
BslFI GGGAC 1 cut(s) 1751
BslI CCNNNNNNNGG 1 cut(s) 226
BsmAI GTCTC 2 cut(s) 169, 1759
BsmFI GGGAC 1 cut(s) 1751
BsnI GGCC 5 cut(s) 362, 386, 1011, 1598, 1733
BsoBI CYCGRG 1 cut(s) 1239
Bsp119I TTCGAA 1 cut(s) 658
Bsp1286I GDGCHC 1 cut(s) 1293
Bsp13I TCCGGA 1 cut(s) 28
Bsp143I GATC 7 cut(s) 25, 202, 263, 805, 1243, 1315, 1492
BspACI CCGC 2 cut(s) 70, 1846
BspANI GGCC 5 cut(s) 362, 386, 1011, 1598, 1733
BspCNI CTCAG 3 cut(s) 535, 824, 1374
BspDI ATCGAT 1 cut(s) 201
BspEI TCCGGA 1 cut(s) 28
BspFNI CGCG 2 cut(s) 70, 1873
BspLI GGNNCC 6 cut(s) 174, 387, 562, 1010, 1036, 1377
BspMAI CTGCAG 1 cut(s) 25
BspPI GGATC 3 cut(s) 20, 800, 1487
BspQI GCTCTTC 4 cut(s) 258, 513, 1281, 1629
BspT104I TTCGAA 1 cut(s) 658
BspT107I GGYRCC 1 cut(s) 1034
BspTI CTTAAG 1 cut(s) 947
BsrDI GCAATG 2 cut(s) 880, 1155
BsrI ACTGG 4 cut(s) 59, 174, 717, 1503
BssECI CCNNGG 3 cut(s) 604, 1335, 1734
BssMI GATC 7 cut(s) 25, 202, 263, 805, 1243, 1315, 1492
BssT1I CCWWGG 1 cut(s) 604
Bst2UI CCWGG 1 cut(s) 1735
Bst4CI ACNGT 9 cut(s) 16, 119, 247, 317, 842, 998, 1390, 1750, 1773
Bst6I CTCTTC 4 cut(s) 258, 513, 1281, 1629
BstAFI CTTAAG 1 cut(s) 947
BstBI TTCGAA 1 cut(s) 658
BstDEI CTNAG 6 cut(s) 132, 522, 811, 1211, 1355, 1382
BstDSI CCRYGG 1 cut(s) 1335
BstF5I GGATG 6 cut(s) 78, 100, 516, 821, 1417, 1720
BstFNI CGCG 2 cut(s) 70, 1873
BstH2I RGCGCY 1 cut(s) 917
BstHHI GCGC 4 cut(s) 916, 967, 1135, 1839
BstKTI GATC 7 cut(s) 28, 205, 266, 808, 1246, 1318, 1495
BstMAI GTCTC 2 cut(s) 169, 1759
BstMBI GATC 7 cut(s) 25, 202, 263, 805, 1243, 1315, 1492
BstMWI GCNNNNNNNGC 4 cut(s) 359, 368, 1571, 1845
BstNI CCWGG 1 cut(s) 1735
BstNSI RCATGY 5 cut(s) 643, 971, 1454, 1510, 1694
BstSCI CCNGG 1 cut(s) 1733
BstSFI CTRYAG 2 cut(s) 21, 1749
BstUI CGCG 2 cut(s) 70, 1873
BstV1I GCAGC 3 cut(s) 7, 513, 1807
BstX2I RGATCY 4 cut(s) 25, 805, 1243, 1492
BstXI CCANNNNNNTGG 2 cut(s) 410, 1741
BstYI RGATCY 4 cut(s) 25, 805, 1243, 1492
Bsu15I ATCGAT 1 cut(s) 201
Bsu36I CCTNAGG 1 cut(s) 811
BsuI GTATCC 1 cut(s) 817
BsuRI GGCC 5 cut(s) 362, 386, 1011, 1598, 1733
BsuTUI ATCGAT 1 cut(s) 201
BtgI CCRYGG 1 cut(s) 1335
BtsCI GGATG 6 cut(s) 78, 100, 516, 821, 1417, 1720
BtsIMutI CAGTG 3 cut(s) 167, 1379, 1496
CaiI CAGNNNCTG 1 cut(s) 20
CfoI GCGC 4 cut(s) 916, 967, 1135, 1839
Cfr13I GGNCC 7 cut(s) 56, 172, 385, 413, 1009, 1231, 1536
ClaI ATCGAT 1 cut(s) 201
CseI GACGC 2 cut(s) 1615, 1862
Csp6I GTAC 2 cut(s) 742, 801
CspCI CAANNNNNGTGG 2 cut(s) 1754, 1789
CviAII CATG 9 cut(s) 150, 578, 640, 771, 968, 1372, 1451, 1507, 1691
CviQI GTAC 2 cut(s) 742, 801
DdeI CTNAG 6 cut(s) 132, 522, 811, 1211, 1355, 1382
DpnI GATC 7 cut(s) 27, 204, 265, 807, 1245, 1317, 1494
DpnII GATC 7 cut(s) 25, 202, 263, 805, 1243, 1315, 1492
EaeI YGGCCR 2 cut(s) 1596, 1731
Eam1104I CTCTTC 4 cut(s) 258, 513, 1281, 1629
EarI CTCTTC 4 cut(s) 258, 513, 1281, 1629
EciI GGCGGA 1 cut(s) 1835
Eco130I CCWWGG 1 cut(s) 604
Eco32I GATATC 1 cut(s) 277
Eco47I GGWCC 5 cut(s) 56, 172, 413, 1231, 1536
Eco57I CTGAAG 2 cut(s) 894, 1466
Eco81I CCTNAGG 1 cut(s) 811
Eco88I CYCGRG 1 cut(s) 1239
EcoO109I RGGNCCY 2 cut(s) 1009, 1231
EcoRI GAATTC 2 cut(s) 633, 974
EcoRII CCWGG 1 cut(s) 1733
EcoRV GATATC 1 cut(s) 277
EcoT14I CCWWGG 1 cut(s) 604
ErhI CCWWGG 1 cut(s) 604
FaeI CATG 9 cut(s) 153, 581, 643, 774, 971, 1375, 1454, 1510, 1694
FaqI GGGAC 1 cut(s) 1751
FatI CATG 9 cut(s) 149, 577, 639, 770, 967, 1371, 1450, 1506, 1690
FauNDI CATATG 1 cut(s) 346
Fnu4HI GCNGC 3 cut(s) 21, 527, 1821
FokI GGATG 6 cut(s) 85, 87, 503, 828, 1424, 1727
Fsp4HI GCNGC 3 cut(s) 21, 527, 1821
FspBI CTAG 3 cut(s) 1202, 1344, 1880
FspI TGCGCA 1 cut(s) 1134
GlaI GCGC 4 cut(s) 915, 966, 1134, 1838
GluI GCNGC 3 cut(s) 21, 527, 1821
GsuI CTGGAG 2 cut(s) 882, 1741
HaeII RGCGCY 1 cut(s) 917
HaeIII GGCC 5 cut(s) 362, 386, 1011, 1598, 1733
HapII CCGG 1 cut(s) 29
HgaI GACGC 2 cut(s) 1615, 1862
HhaI GCGC 4 cut(s) 916, 967, 1135, 1839
Hin1II CATG 9 cut(s) 153, 581, 643, 774, 971, 1375, 1454, 1510, 1694
Hin6I GCGC 4 cut(s) 914, 965, 1133, 1837
HinP1I GCGC 4 cut(s) 914, 965, 1133, 1837
HincII GTYRAC 1 cut(s) 1688
HindII GTYRAC 1 cut(s) 1688
HinfI GANTC 1 cut(s) 1157
HpaII CCGG 1 cut(s) 29
HphI GGTGA 2 cut(s) 1565, 1819
Hpy166II GTNNAC 2 cut(s) 1536, 1688
Hpy188I TCNGA 8 cut(s) 731, 846, 1017, 1180, 1446, 1485, 1657, 1704
Hpy188III TCNNGA 9 cut(s) 29, 104, 813, 855, 899, 938, 1241, 1758, 1802
Hpy8I GTNNAC 2 cut(s) 1536, 1688
Hpy99I CGWCG 1 cut(s) 1878
HpyAV CCTTC 8 cut(s) 230, 426, 654, 979, 1022, 1480, 1517, 1804
HpyCH4III ACNGT 9 cut(s) 16, 119, 247, 317, 842, 998, 1390, 1750, 1773
HpyCH4IV ACGT 3 cut(s) 1071, 1457, 1906
HpyF10VI GCNNNNNNNGC 4 cut(s) 359, 368, 1571, 1845
HpyF3I CTNAG 6 cut(s) 132, 522, 811, 1211, 1355, 1382
HpySE526I ACGT 3 cut(s) 1071, 1457, 1906
Hsp92II CATG 9 cut(s) 153, 581, 643, 774, 971, 1375, 1454, 1510, 1694
HspAI GCGC 4 cut(s) 914, 965, 1133, 1837
Kpn2I TCCGGA 1 cut(s) 28
Kzo9I GATC 7 cut(s) 25, 202, 263, 805, 1243, 1315, 1492
LguI GCTCTTC 4 cut(s) 258, 513, 1281, 1629
LmnI GCTCC 2 cut(s) 566, 731
Lsp1109I GCAGC 3 cut(s) 7, 513, 1807
LweI GCATC 4 cut(s) 18, 931, 1661, 1705
MaeI CTAG 3 cut(s) 1202, 1344, 1880
MaeII ACGT 3 cut(s) 1071, 1457, 1906
MaeIII GTNAC 8 cut(s) 142, 311, 538, 719, 862, 1453, 1619, 1790
MalI GATC 7 cut(s) 27, 204, 265, 807, 1245, 1317, 1494
MboI GATC 7 cut(s) 25, 202, 263, 805, 1243, 1315, 1492
MfeI CAATTG 1 cut(s) 1645
MflI RGATCY 4 cut(s) 25, 805, 1243, 1492
MhlI GDGCHC 1 cut(s) 1293
MlsI TGGCCA 2 cut(s) 1598, 1733
MluNI TGGCCA 2 cut(s) 1598, 1733
MmeI TCCRAC 1 cut(s) 824
Mox20I TGGCCA 2 cut(s) 1598, 1733
MroI TCCGGA 1 cut(s) 28
MroXI GAANNNNTTC 1 cut(s) 1638
MscI TGGCCA 2 cut(s) 1598, 1733
MseI TTAA 6 cut(s) 63, 375, 681, 948, 1401, 1909
MslI CAYNNNNRTG 2 cut(s) 1058, 1626
Msp20I TGGCCA 2 cut(s) 1598, 1733
MspA1I CMGCKG 1 cut(s) 526
MspCI CTTAAG 1 cut(s) 947
MspI CCGG 1 cut(s) 29
MspR9I CCNGG 1 cut(s) 1735
MunI CAATTG 1 cut(s) 1645
MvaI CCWGG 1 cut(s) 1735
MvnI CGCG 2 cut(s) 70, 1873
MwoI GCNNNNNNNGC 4 cut(s) 359, 368, 1571, 1845
NdeI CATATG 1 cut(s) 346
NdeII GATC 7 cut(s) 25, 202, 263, 805, 1243, 1315, 1492
NlaIII CATG 9 cut(s) 153, 581, 643, 774, 971, 1375, 1454, 1510, 1694
NlaIV GGNNCC 6 cut(s) 174, 387, 562, 1010, 1036, 1377
NmuCI GTSAC 6 cut(s) 311, 538, 719, 862, 1453, 1619
NsbI TGCGCA 1 cut(s) 1134
NspI RCATGY 5 cut(s) 643, 971, 1454, 1510, 1694
NspV TTCGAA 1 cut(s) 658
PaeR7I CTCGAG 1 cut(s) 1239
PciI ACATGT 2 cut(s) 639, 1690
PciSI GCTCTTC 4 cut(s) 258, 513, 1281, 1629
PdmI GAANNNNTTC 1 cut(s) 1638
PfeI GAWTC 1 cut(s) 1157
PflFI GACNNNGTC 1 cut(s) 317
PkrI GCNGC 3 cut(s) 22, 528, 1822
PpuMI RGGWCCY 1 cut(s) 1231
PscI ACATGT 2 cut(s) 639, 1690
Psp1406I AACGTT 2 cut(s) 1071, 1906
Psp5II RGGWCCY 1 cut(s) 1231
Psp6I CCWGG 1 cut(s) 1733
PspGI CCWGG 1 cut(s) 1733
PspN4I GGNNCC 6 cut(s) 174, 387, 562, 1010, 1036, 1377
PspPI GGNCC 7 cut(s) 56, 172, 385, 413, 1009, 1231, 1536
PspPPI RGGWCCY 1 cut(s) 1231
PstI CTGCAG 1 cut(s) 25
PstNI CAGNNNCTG 1 cut(s) 20
PsuI RGATCY 4 cut(s) 25, 805, 1243, 1492
PsyI GACNNNGTC 1 cut(s) 317
PvuII CAGCTG 1 cut(s) 526
RsaI GTAC 2 cut(s) 743, 802
RsaNI GTAC 2 cut(s) 742, 801
RseI CAYNNNNRTG 2 cut(s) 1058, 1626
SapI GCTCTTC 4 cut(s) 258, 513, 1281, 1629
SaqAI TTAA 6 cut(s) 63, 375, 681, 948, 1401, 1909
SatI GCNGC 3 cut(s) 21, 527, 1821
Sau3AI GATC 7 cut(s) 25, 202, 263, 805, 1243, 1315, 1492
Sau96I GGNCC 7 cut(s) 56, 172, 385, 413, 1009, 1231, 1536
ScrFI CCNGG 1 cut(s) 1735
SduI GDGCHC 1 cut(s) 1293
SfaNI GCATC 4 cut(s) 18, 931, 1661, 1705
SfcI CTRYAG 2 cut(s) 21, 1749
Sfr274I CTCGAG 1 cut(s) 1239
SfuI TTCGAA 1 cut(s) 658
SinI GGWCC 5 cut(s) 56, 172, 413, 1231, 1536
SlaI CTCGAG 1 cut(s) 1239
SmiMI CAYNNNNRTG 2 cut(s) 1058, 1626
SmlI CTYRAG 4 cut(s) 947, 1239, 1610, 1800
SmoI CTYRAG 4 cut(s) 947, 1239, 1610, 1800
SsiI CCGC 2 cut(s) 70, 1846
SspI AATATT 1 cut(s) 627
SspMI CTAG 3 cut(s) 1202, 1344, 1880
StyD4I CCNGG 1 cut(s) 1733
StyI CCWWGG 1 cut(s) 604
TaaI ACNGT 9 cut(s) 16, 119, 247, 317, 842, 998, 1390, 1750, 1773
TaiI ACGT 3 cut(s) 1074, 1460, 1909
TaqI TCGA 6 cut(s) 201, 439, 658, 1240, 1521, 1544
TatI WGTACW 1 cut(s) 800
TfiI GAWTC 1 cut(s) 1157
Tru1I TTAA 6 cut(s) 63, 375, 681, 948, 1401, 1909
Tru9I TTAA 6 cut(s) 63, 375, 681, 948, 1401, 1909
TscAI CASTG 3 cut(s) 174, 1386, 1503
TseFI GTSAC 6 cut(s) 311, 538, 719, 862, 1453, 1619
TseI GCWGC 3 cut(s) 20, 526, 1820
Tsp45I GTSAC 6 cut(s) 311, 538, 719, 862, 1453, 1619
TspDTI ATGAA 8 cut(s) 101, 286, 318, 594, 684, 1428, 1504, 1575
TspGWI ACGGA 1 cut(s) 1682
TspRI CASTG 3 cut(s) 174, 1386, 1503
Tth111I GACNNNGTC 1 cut(s) 317
Vha464I CTTAAG 1 cut(s) 947
VpaK11BI GGWCC 5 cut(s) 56, 172, 413, 1231, 1536
XapI RAATTY 4 cut(s) 497, 592, 633, 974
XceI RCATGY 5 cut(s) 643, 971, 1454, 1510, 1694
XhoI CTCGAG 1 cut(s) 1239
XmnI GAANNNNTTC 1 cut(s) 1638
XspI CTAG 3 cut(s) 1202, 1344, 1880
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.