Rw1G039340

Cyclic nucleotide-gated ion channel 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
OG0000119
Physical Location & Seq
Reverse (-)
66883348 .. 66886995
3648 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G039340.1

Sequence Viewer

Length: 1923 bp
ATGTCTAAACATAAGGTACCCAACTACGATGAGAGCATCATCGATTTGAGCGTTACACAAGGAATAGGTTATGATTTCAACTGTCCTGAGGCTCTATCGCAACATCCAATACGGAAACGTGAACCTGAAGAAACTCAAGCAAGCAACAAAGGGAAAAGGCCAACAGTTGCGGAAGTTCTTTCAGTTTTGAACCCATCGTGGAATACGATACTATTAACTTCATGTGTGATTGCAGTTTTGTTTGATCCTTTGTTCTTTTACATTCCATACATCAATGAGAAAGAAAAGTGCATGGGAATCGATAAACAAGTGCGGACTGCAGCTCTGGTTTTCCGATCAGTCACGGACATCACTTTCCTAGTGCATATCATATACCAACTTCGTGAAGCTATCAAATTTGCAGCTTCAAAGGTTCCAAGGGATACAAATTCAAAAAATTGGGAATGGGAATCGGTATCCCGAGCTCAGATGATTAAGTTTGCGAAGGAATTTTCTCGCAAATTGTCATGGCGCTCTTTCCTAACTGATGTTTTCGCTATTTTCCCCATGCCACAACTGCTAATAGTAGGGTTCTTTTTCGAAATGGGAGGCAGTAACTATTTGGAGAGAAGAAAGATTCTGAGTGGTTTTGTTCTAATCCAATATGTGCCAAGAATTTATCGAATTTATCTATCGTATACCGCGGTTACACATTCCGCATTATGGGTTAAAGGTGCATTCAATTTTTTTCTCTACATCCTTGCCAGTCATGTACTGGGAGCTTTTTGGTACTTTTTTTCTATTTTTCGAGAGACATCATGTTGGTACCGAAGTTGCATTGAGGCAAATCCAAGATCAGGATGCACTTTTTATTGCCATGACAAAACTCCAATTGTAACCGAAGGATTCAATAAAACTACTCTAGGAGATCTTTGCCTTTTAAAAGTTCCACATGATATGTTGGAACCACCATTTGATTTTGGAATATTTTTTGATGCCCTCAAAAATGATATCCAGGGGCCAATAAATTTTCCAACAAAGATTGGTTTCTGCTTTTGGTGGGGCTTGCGAAATTTAAGTTCTTTTGGCACAAGTTTGGAAACAAGTACCTATCTGTGGGAAAACACCTTTGCAATTCTTATTTCTATCATCGGCTTGCTATTGTTTCTATATCTCATTGGAAATGTTCAGTTATATATGGAGAAGGCAATTACAAGAGCGGAAGAGGTAAGAGAGAAAATTCAGACCAAAAAGAACGATATAGAAAAGTGGATGGAAAATAATGACCTCCAAGATGACATGAAGGAAGAGATCATGAAAAACATCAAGAAAAAATTGGAAGAGGACATAAATGCCGATCTGGAGAATCTATTCTCTGTTCTTCCCTGGTATACCAAGAAAGCTCTAAAGCGCGTTCTTTGCATGAGTGCGCTAAGAAAAGTACCAATGCTTAGCCAGATGGATGAAAAAGTTTTGAAAATGATGTGCGACTATCTGAAGCCGGTGAATTACCCAGAGAATACCTTGGTTTTTCAGATGGGAGAACCATTTGATCGAATGGTCTTCATTACAGAAGGGCTTATGTGGACTTACACGACTGCTACTGAGAGTAGTCATTATGGAAAAGCAACAAAACCGGCTACTTCTCCATCCATGGATACCAACTTCCTCAAGAAGGGTGATTCTTATGGACACGCGCTTCTGCAGTTTGCATCATCATCTCTTGCGGCACTCCCTACCTCGAACGCAAATGTCCGGTGTCACACAAGGGTTGAAGCGTTTGTTCTCATGGCCAAGGACTTGAAAAACATAGTAACTAAATGCGAACATTTGTGGCCTTTCGACTACAATGCTTCTAAAGATGAGGCGGCGGATAAGGTGGCACCACTGGGGCAGTTGCCAAAGAAGTGTGTATCAACATCGACCACTGGCAACCGTGGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
Ion_trans cNMP_binding

Protein Analysis

640

Amino Acids

73.53

Weight (kDa)

8.54

Isoelectric Point (pI)

40.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000119)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g10570 FvH4_4g36390 FvH4_7g31840 FvH4_7g31840 FvH4_7g31850 FvH4_7g31850 FvH4_7g31861 FvH4_7g31861 FvH4_7g31950
malus_domestica MD01G1054600.v1.1 MD01G1221100.v1.1 MD01G1221400.v1.1 MD01G1221600.v1.1 MD01G1221800.v1.1 MD01G1222000.v1.1 MD01G1222100.v1.1 MD07G1140800.v1.1 MD07G1291200.v1.1 MD07G1291400.v1.1 MD07G1291500.v1.1 MD07G1291700.v1.1 MD07G1292500.v1.1 MD07G1292700.v1.1 MD07G1292800.v1.1 MD07G1292900.v1.1 MD08G1241600.v1.1 MD11G1083800.v1.1 MD15G1431600.v1.1
prunus_persica Prupe.1G017800_v2.0.a1 Prupe.1G017800_v2.0.a1 Prupe.1G162800_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312700_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G143000_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1
pyrus_communis pycom01g23050 pycom01g23070 pycom01g23090 pycom01g23100 pycom01g23110 pycom01g23120 pycom01g23170 pycom07g26410 pycom07g26440 pycom07g26470 pycom07g26480 pycom07g26490 pycom07g26500 pycom07g26510 pycom07g26530 pycom07g26540 pycom07g26570 pycom07g26580 pycom07g26590 pycom08g20940
rosa_chinensis RchiOBHm_Chr1g0324571 RchiOBHm_Chr1g0336181 RchiOBHm_Chr1g0381061 RchiOBHm_Chr1g0381091 RchiOBHm_Chr1g0381121 RchiOBHm_Chr1g0381131 RchiOBHm_Chr1g0381141 RchiOBHm_Chr1g0381161 RchiOBHm_Chr1g0381211 RchiOBHm_Chr2g0110361 RchiOBHm_Chr2g0120231 RchiOBHm_Chr3g0486281 RchiOBHm_Chr3g0486311 RchiOBHm_Chr3g0486401 RchiOBHm_Chr4g0409511 RchiOBHm_Chr4g0409521 RchiOBHm_Chr5g0017271 RchiOBHm_Chr5g0048781 RchiOBHm_Chr5g0048811
rosa_laevigata RLG00000002401 RLG00000008559 RLG00000017798 RLG00000017799 RLG00000023082 RLG00000023088 RLG00000026230 RLG00000026238 RLG00000026240 RLG00000026241 RLG00000026242 RLG00000026243 RLG00000026244 RLG00000026246 RLG00000026247 RLG00000026248 RLG00000029876 RLG00000030189 RLG00000034579
rosa_multiflora Rmu_co8101374.1_g000001 Rmu_co8309149.1_g000001 Rmu_co8450063.1_g000001 Rmu_sc0000441.1_g000094 Rmu_sc0000479.1_g000005 Rmu_sc0000647.1_g000006 Rmu_sc0001393.1_g000031 Rmu_sc0001423.1_g000037 Rmu_sc0001616.1_g000015 Rmu_sc0001857.1_g000011 Rmu_sc0002183.1_g000013 Rmu_sc0002183.1_g000028 Rmu_sc0002183.1_g000030 Rmu_sc0002688.1_g000003 Rmu_sc0002688.1_g000020 Rmu_sc0003801.1_g000003 Rmu_sc0003801.1_g000004 Rmu_sc0004125.1_g000006 Rmu_sc0004494.1_g000005 Rmu_sc0004494.1_g000006 Rmu_sc0004494.1_g000008 Rmu_sc0004494.1_g000009 Rmu_sc0005842.1_g000004 Rmu_sc0006872.1_g000001 Rmu_sc0006872.1_g000005 Rmu_sc0006872.1_g000009 Rmu_sc0006872.1_g000010 Rmu_sc0008053.1_g000026
rosa_roxburghii Rroxscaffold_159G00432960 Rroxscaffold_1G00033060 Rroxscaffold_2G00123150 Rroxscaffold_2G00123170 Rroxscaffold_2G00133500 Rroxscaffold_2G00133550 Rroxscaffold_4G00278650 Rroxscaffold_4G00278750 Rroxscaffold_4G00278790 Rroxscaffold_4G00278800 Rroxscaffold_4G00278810 Rroxscaffold_4G00325390 Rroxscaffold_5G00354010 Rroxscaffold_6G00395890 Rroxscaffold_6G00395900 Rroxscaffold_6G00395920
rosa_rugosa Rorug01G0046900.1 Rorug01G0427000 Rorug01G0427100 Rorug01G0427200 Rorug01G0427300 Rorug01G0427400 Rorug01G0427500 Rorug01G0427500 Rorug01G0427600 Rorug01G0427600 Rorug01G0427700 Rorug01G0427700 Rorug01G0427800 Rorug01G0428700 Rorug02G0166400 Rorug02G0166500 Rorug02G0166500 Rorug02G0166600 Rorug02G0166600 Rorug02G0166700 Rorug02G0167300 Rorug02G0167300 Rorug02G0167300 Rorug03G0224600 Rorug03G0224600 Rorug04G0094400 Rorug05G0241100 Rorug05G0241200
rosa_samantha Rh1BG407700 Rh1BG407900 Rh1BG409000 Rh1CG064700 Rh1CG420900 Rh1CG421000 Rh1CG421200 Rh1CG421300 Rh1CG421800 Rh1CG421900 Rh1CG422000 Rh1CG422200 Rh1CG422300 Rh1CG423600 Rh1DG437600 Rh1DG438900 Rh1DG439000 Rh1DG440300 Rh2AG219100 Rh2CG220700 Rh2DG225300 Rh3AG274400 Rh3AG274600 Rh3CG308900 Rh3DG305800 Rh4AG156400 Rh5AG129000 Rh5AG320900 Rh5CG139600
rosa_wichuraiana Rw1G005300 Rw1G039280 Rw1G039300 Rw1G039310 Rw1G039320 Rw1G039330 Rw1G039340 Rw1G039360 Rw1G039390 Rw2G016910 Rw2G022800 Rw3G024330 Rw3G024340 Rw3G024350 Rw3G024400 Rw4G012810 Rw5G030120 Rw5G030280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 2 cut(s) 16, 804
AccB1I GGYRCC 3 cut(s) 16, 804, 1861
AccBSI CCGCTC 1 cut(s) 1199
AccI GTMKAC 2 cut(s) 677, 1370
AccII CGCG 3 cut(s) 683, 1392, 1676
AciI CCGC 9 cut(s) 170, 313, 681, 683, 696, 1199, 1706, 1847, 1850
AclWI GGATC 1 cut(s) 239
AcoI YGGCCR 1 cut(s) 1770
AcsI RAATTY 8 cut(s) 395, 427, 488, 654, 663, 1006, 1051, 1218
AcuI CTGAAG 2 cut(s) 147, 1496
AfaI GTAC 6 cut(s) 18, 753, 770, 806, 1087, 1422
AfiI CCNNNNNNNGG 4 cut(s) 702, 836, 1095, 1654
AgsI TTSAA 9 cut(s) 79, 190, 408, 432, 721, 889, 1456, 1754, 1783
AjnI CCWGG 2 cut(s) 993, 1364
AluBI AGCT 6 cut(s) 323, 389, 404, 464, 761, 1382
AluI AGCT 6 cut(s) 323, 389, 404, 464, 761, 1382
Alw21I GWGCWC 1 cut(s) 466
Alw26I GTCTC 1 cut(s) 785
AlwI GGATC 1 cut(s) 239
Ama87I CYCGRG 1 cut(s) 459
AoxI GGCC 4 cut(s) 158, 998, 1770, 1814
ApeKI GCWGC 2 cut(s) 320, 401
ApoI RAATTY 8 cut(s) 395, 427, 488, 654, 663, 1006, 1051, 1218
Asp700I GAANNNNTTC 1 cut(s) 1349
Asp718I GGTACC 2 cut(s) 16, 804
AspLEI GCGC 4 cut(s) 513, 1392, 1411, 1678
AspS9I GGNCC 1 cut(s) 998
AsuHPI GGTGA 2 cut(s) 1495, 1670
AsuII TTCGAA 1 cut(s) 579
AvaI CYCGRG 1 cut(s) 459
AxyI CCTNAGG 1 cut(s) 87
BaeI ACNNNNGTAYC 2 cut(s) 796, 829
BalI TGGCCA 1 cut(s) 1772
BanI GGYRCC 3 cut(s) 16, 804, 1861
BanII GRGCYC 1 cut(s) 466
BbsI GAAGAC 1 cut(s) 1534
Bbv12I GWGCWC 1 cut(s) 466
BbvI GCAGC 2 cut(s) 332, 413
BccI CCATC 5 cut(s) 202, 1246, 1432, 1510, 1636
BcgI CGANNNNNNTGC 4 cut(s) 280, 314, 1811, 1845
BciT130I CCWGG 2 cut(s) 995, 1366
BciVI GTATCC 3 cut(s) 415, 466, 1630
BcoDI GTCTC 1 cut(s) 785
BfaI CTAG 2 cut(s) 359, 902
BfmI CTRYAG 2 cut(s) 318, 1682
BfoI RGCGCY 1 cut(s) 514
BfuI GTATCC 3 cut(s) 415, 466, 1630
BglII AGATCT 1 cut(s) 907
BisI GCNGC 4 cut(s) 321, 402, 1707, 1848
BlpI GCTNAGC 1 cut(s) 1430
BlsI GCNGC 4 cut(s) 322, 403, 1708, 1849
Bme1390I CCNGG 2 cut(s) 995, 1366
BmeT110I CYCGRG 1 cut(s) 459
BmgT120I GGNCC 1 cut(s) 998
BmiI GGNNCC 6 cut(s) 18, 414, 806, 945, 999, 1863
BmrFI CCNGG 2 cut(s) 995, 1366
BmrI ACTGGG 2 cut(s) 764, 1877
BmsI GCATC 4 cut(s) 45, 830, 964, 1700
BmuI ACTGGG 2 cut(s) 764, 1877
BpiI GAAGAC 1 cut(s) 1534
BpmI CTGGAG 1 cut(s) 1361
Bpu1102I GCTNAGC 1 cut(s) 1430
Bpu14I TTCGAA 1 cut(s) 579
BpuEI CTTGAG 2 cut(s) 120, 1634
Bsa29I ATCGAT 2 cut(s) 42, 300
BsaJI CCNNGG 8 cut(s) 416, 681, 994, 1364, 1503, 1632, 1773, 1915
BsaWI WCCGGW 1 cut(s) 1734
Bsc4I CCNNNNNNNGG 4 cut(s) 702, 836, 1095, 1654
Bse118I RCCGGY 2 cut(s) 1480, 1615
Bse1I ACTGG 4 cut(s) 744, 759, 1872, 1912
Bse21I CCTNAGG 1 cut(s) 87
BseBI CCWGG 2 cut(s) 995, 1366
BseCI ATCGAT 2 cut(s) 42, 300
BseDI CCNNGG 8 cut(s) 416, 681, 994, 1364, 1503, 1632, 1773, 1915
BseGI GGATG 6 cut(s) 103, 735, 845, 1257, 1447, 1628
BseLI CCNNNNNNNGG 4 cut(s) 702, 836, 1095, 1654
BseMII CTCAG 4 cut(s) 78, 479, 611, 1575
BseNI ACTGG 4 cut(s) 744, 759, 1872, 1912
BseXI GCAGC 2 cut(s) 332, 413
Bsh1236I CGCG 3 cut(s) 683, 1392, 1676
BshFI GGCC 4 cut(s) 160, 1000, 1772, 1816
BshNI GGYRCC 3 cut(s) 16, 804, 1861
BshVI ATCGAT 2 cut(s) 42, 300
BsiHKAI GWGCWC 1 cut(s) 466
BsiHKCI CYCGRG 1 cut(s) 459
BsiSI CCGG 3 cut(s) 1481, 1616, 1735
BslI CCNNNNNNNGG 4 cut(s) 702, 836, 1095, 1654
BsmAI GTCTC 1 cut(s) 785
BsmI GAATGC 1 cut(s) 716
BsnI GGCC 4 cut(s) 160, 1000, 1772, 1816
BsoBI CYCGRG 1 cut(s) 459
Bsp119I TTCGAA 1 cut(s) 579
Bsp1286I GDGCHC 1 cut(s) 466
Bsp143I GATC 7 cut(s) 244, 335, 833, 907, 1290, 1336, 1531
Bsp1720I GCTNAGC 1 cut(s) 1430
Bsp19I CCATGG 1 cut(s) 1632
BspACI CCGC 9 cut(s) 170, 313, 681, 683, 696, 1199, 1706, 1847, 1850
BspANI GGCC 4 cut(s) 160, 1000, 1772, 1816
BspCNI CTCAG 4 cut(s) 79, 478, 612, 1576
BspDI ATCGAT 2 cut(s) 42, 300
BspFNI CGCG 3 cut(s) 683, 1392, 1676
BspHI TCATGA 1 cut(s) 1293
BspLI GGNNCC 6 cut(s) 18, 414, 806, 945, 999, 1863
BspMAI CTGCAG 2 cut(s) 322, 1686
BspPI GGATC 1 cut(s) 239
BspT104I TTCGAA 1 cut(s) 579
BspT107I GGYRCC 3 cut(s) 16, 804, 1861
BsrBI CCGCTC 1 cut(s) 1199
BsrFI RCCGGY 2 cut(s) 1480, 1615
BsrI ACTGG 4 cut(s) 744, 759, 1872, 1912
BssAI RCCGGY 2 cut(s) 1480, 1615
BssECI CCNNGG 8 cut(s) 416, 681, 994, 1364, 1503, 1632, 1773, 1915
BssMI GATC 7 cut(s) 244, 335, 833, 907, 1290, 1336, 1531
BssNAI GTATAC 2 cut(s) 678, 1371
BssT1I CCWWGG 4 cut(s) 416, 1503, 1632, 1773
Bst1107I GTATAC 2 cut(s) 678, 1371
Bst2UI CCWGG 2 cut(s) 995, 1366
Bst4CI ACNGT 3 cut(s) 83, 166, 1916
Bst6I CTCTTC 3 cut(s) 1197, 1281, 1314
BstBI TTCGAA 1 cut(s) 579
BstC8I GCNNGC 3 cut(s) 142, 1046, 1136
BstDEI CTNAG 6 cut(s) 87, 465, 620, 1412, 1430, 1584
BstDSI CCRYGG 3 cut(s) 681, 1632, 1915
BstENI CCTNNNNNAGG 1 cut(s) 1652
BstF5I GGATG 6 cut(s) 103, 735, 845, 1257, 1447, 1628
BstFNI CGCG 3 cut(s) 683, 1392, 1676
BstH2I RGCGCY 1 cut(s) 514
BstHHI GCGC 4 cut(s) 513, 1392, 1411, 1678
BstKTI GATC 7 cut(s) 247, 338, 836, 910, 1293, 1339, 1534
BstMAI GTCTC 1 cut(s) 785
BstMBI GATC 7 cut(s) 244, 335, 833, 907, 1290, 1336, 1531
BstMWI GCNNNNNNNGC 2 cut(s) 556, 1398
BstNI CCWGG 2 cut(s) 995, 1366
BstSCI CCNGG 2 cut(s) 993, 1364
BstSFI CTRYAG 2 cut(s) 318, 1682
BstUI CGCG 3 cut(s) 683, 1392, 1676
BstV1I GCAGC 2 cut(s) 332, 413
BstV2I GAAGAC 1 cut(s) 1534
BstX2I RGATCY 1 cut(s) 907
BstYI RGATCY 1 cut(s) 907
BstZ17I GTATAC 2 cut(s) 678, 1371
Bsu15I ATCGAT 2 cut(s) 42, 300
Bsu36I CCTNAGG 1 cut(s) 87
BsuI GTATCC 3 cut(s) 415, 466, 1630
BsuRI GGCC 4 cut(s) 160, 1000, 1772, 1816
BsuTUI ATCGAT 2 cut(s) 42, 300
BtgI CCRYGG 3 cut(s) 681, 1632, 1915
BtsCI GGATG 6 cut(s) 103, 735, 845, 1257, 1447, 1628
BtsIMutI CAGTG 2 cut(s) 1865, 1905
Cac8I GCNNGC 3 cut(s) 142, 1046, 1136
CciI TCATGA 1 cut(s) 1293
CfoI GCGC 4 cut(s) 513, 1392, 1411, 1678
Cfr10I RCCGGY 2 cut(s) 1480, 1615
Cfr13I GGNCC 1 cut(s) 998
Cfr42I CCGCGG 1 cut(s) 684
ClaI ATCGAT 2 cut(s) 42, 300
Csp6I GTAC 6 cut(s) 17, 752, 769, 805, 1086, 1421
CviQI GTAC 6 cut(s) 17, 752, 769, 805, 1086, 1421
DdeI CTNAG 6 cut(s) 87, 465, 620, 1412, 1430, 1584
DpnI GATC 7 cut(s) 246, 337, 835, 909, 1292, 1338, 1533
DpnII GATC 7 cut(s) 244, 335, 833, 907, 1290, 1336, 1531
DraI TTTAAA 1 cut(s) 921
EaeI YGGCCR 1 cut(s) 1770
Eam1104I CTCTTC 3 cut(s) 1197, 1281, 1314
EarI CTCTTC 3 cut(s) 1197, 1281, 1314
EciI GGCGGA 1 cut(s) 1865
Ecl136II GAGCTC 1 cut(s) 464
Eco130I CCWWGG 4 cut(s) 416, 1503, 1632, 1773
Eco24I GRGCYC 1 cut(s) 466
Eco32I GATATC 1 cut(s) 991
Eco53kI GAGCTC 1 cut(s) 464
Eco57I CTGAAG 2 cut(s) 147, 1496
Eco81I CCTNAGG 1 cut(s) 87
Eco88I CYCGRG 1 cut(s) 459
EcoICRI GAGCTC 1 cut(s) 464
EcoNI CCTNNNNNAGG 1 cut(s) 1652
EcoRII CCWGG 2 cut(s) 993, 1364
EcoRV GATATC 1 cut(s) 991
EcoT14I CCWWGG 4 cut(s) 416, 1503, 1632, 1773
EcoT38I GRGCYC 1 cut(s) 466
ErhI CCWWGG 4 cut(s) 416, 1503, 1632, 1773
FblI GTMKAC 2 cut(s) 677, 1370
Fnu4HI GCNGC 4 cut(s) 321, 402, 1707, 1848
FokI GGATG 6 cut(s) 90, 722, 852, 1264, 1454, 1615
FriOI GRGCYC 1 cut(s) 466
Fsp4HI GCNGC 4 cut(s) 321, 402, 1707, 1848
FspBI CTAG 2 cut(s) 359, 902
GlaI GCGC 4 cut(s) 512, 1391, 1410, 1677
GluI GCNGC 4 cut(s) 321, 402, 1707, 1848
GsuI CTGGAG 1 cut(s) 1361
HaeII RGCGCY 1 cut(s) 514
HaeIII GGCC 4 cut(s) 160, 1000, 1772, 1816
HapII CCGG 3 cut(s) 1481, 1616, 1735
HhaI GCGC 4 cut(s) 513, 1392, 1411, 1678
Hin6I GCGC 4 cut(s) 511, 1390, 1409, 1676
HinP1I GCGC 4 cut(s) 511, 1390, 1409, 1676
HinfI GANTC 6 cut(s) 297, 449, 616, 885, 1345, 1661
HpaII CCGG 3 cut(s) 1481, 1616, 1735
HphI GGTGA 2 cut(s) 1495, 1670
Hpy166II GTNNAC 4 cut(s) 122, 678, 1371, 1566
Hpy188I TCNGA 6 cut(s) 335, 468, 621, 1224, 1476, 1515
Hpy188III TCNNGA 9 cut(s) 86, 383, 459, 788, 837, 1294, 1306, 1340, 1651
Hpy8I GTNNAC 4 cut(s) 122, 678, 1371, 1566
HpyAV CCTTC 6 cut(s) 478, 875, 1177, 1276, 1547, 1648
HpyCH4III ACNGT 3 cut(s) 83, 166, 1916
HpyCH4IV ACGT 1 cut(s) 118
HpyF10VI GCNNNNNNNGC 2 cut(s) 556, 1398
HpyF3I CTNAG 6 cut(s) 87, 465, 620, 1412, 1430, 1584
HpySE526I ACGT 1 cut(s) 118
HspAI GCGC 4 cut(s) 511, 1390, 1409, 1676
KpnI GGTACC 2 cut(s) 20, 808
KspI CCGCGG 1 cut(s) 684
Kzo9I GATC 7 cut(s) 244, 335, 833, 907, 1290, 1336, 1531
LmnI GCTCC 1 cut(s) 758
Lsp1109I GCAGC 2 cut(s) 332, 413
LweI GCATC 4 cut(s) 45, 830, 964, 1700
MaeI CTAG 2 cut(s) 359, 902
MaeII ACGT 1 cut(s) 118
MaeIII GTNAC 7 cut(s) 52, 340, 593, 685, 874, 1739, 1792
MalI GATC 7 cut(s) 246, 337, 835, 909, 1292, 1338, 1533
MbiI CCGCTC 1 cut(s) 1199
MboI GATC 7 cut(s) 244, 335, 833, 907, 1290, 1336, 1531
MboII GAAGA 7 cut(s) 140, 621, 1214, 1298, 1331, 1352, 1534
MfeI CAATTG 1 cut(s) 870
MflI RGATCY 1 cut(s) 907
MhlI GDGCHC 1 cut(s) 466
MlsI TGGCCA 1 cut(s) 1772
MluNI TGGCCA 1 cut(s) 1772
MmeI TCCRAC 2 cut(s) 921, 1037
Mox20I TGGCCA 1 cut(s) 1772
MroXI GAANNNNTTC 1 cut(s) 1349
MscI TGGCCA 1 cut(s) 1772
MseI TTAA 5 cut(s) 215, 474, 708, 920, 1055
Msp20I TGGCCA 1 cut(s) 1772
MspA1I CMGCKG 1 cut(s) 683
MspI CCGG 3 cut(s) 1481, 1616, 1735
MspR9I CCNGG 2 cut(s) 995, 1366
MunI CAATTG 1 cut(s) 870
Mva1269I GAATGC 1 cut(s) 716
MvaI CCWGG 2 cut(s) 995, 1366
MvnI CGCG 3 cut(s) 683, 1392, 1676
MwoI GCNNNNNNNGC 2 cut(s) 556, 1398
NcoI CCATGG 1 cut(s) 1632
NdeII GATC 7 cut(s) 244, 335, 833, 907, 1290, 1336, 1531
NlaIV GGNNCC 6 cut(s) 18, 414, 806, 945, 999, 1863
NmuCI GTSAC 2 cut(s) 340, 1739
NspV TTCGAA 1 cut(s) 579
PagI TCATGA 1 cut(s) 1293
PcsI WCGNNNNNNNCGW 2 cut(s) 48, 203
PctI GAATGC 1 cut(s) 716
PdmI GAANNNNTTC 1 cut(s) 1349
PfeI GAWTC 6 cut(s) 297, 449, 616, 885, 1345, 1661
PkrI GCNGC 4 cut(s) 322, 403, 1708, 1849
Psp124BI GAGCTC 1 cut(s) 466
Psp6I CCWGG 2 cut(s) 993, 1364
PspGI CCWGG 2 cut(s) 993, 1364
PspN4I GGNNCC 6 cut(s) 18, 414, 806, 945, 999, 1863
PspPI GGNCC 1 cut(s) 998
PstI CTGCAG 2 cut(s) 322, 1686
PsuI RGATCY 1 cut(s) 907
RsaI GTAC 6 cut(s) 18, 753, 770, 806, 1087, 1422
RsaNI GTAC 6 cut(s) 17, 752, 769, 805, 1086, 1421
SacI GAGCTC 1 cut(s) 466
SacII CCGCGG 1 cut(s) 684
SaqAI TTAA 5 cut(s) 215, 474, 708, 920, 1055
SatI GCNGC 4 cut(s) 321, 402, 1707, 1848
Sau3AI GATC 7 cut(s) 244, 335, 833, 907, 1290, 1336, 1531
Sau96I GGNCC 1 cut(s) 998
ScrFI CCNGG 2 cut(s) 995, 1366
SduI GDGCHC 1 cut(s) 466
SfaNI GCATC 4 cut(s) 45, 830, 964, 1700
SfcI CTRYAG 2 cut(s) 318, 1682
Sfr303I CCGCGG 1 cut(s) 684
SfuI TTCGAA 1 cut(s) 579
SgrBI CCGCGG 1 cut(s) 684
SmlI CTYRAG 2 cut(s) 135, 1649
SmoI CTYRAG 2 cut(s) 135, 1649
SsiI CCGC 9 cut(s) 170, 313, 681, 683, 696, 1199, 1706, 1847, 1850
SspI AATATT 1 cut(s) 966
SspMI CTAG 2 cut(s) 359, 902
SstI GAGCTC 1 cut(s) 466
StyD4I CCNGG 2 cut(s) 993, 1364
StyI CCWWGG 4 cut(s) 416, 1503, 1632, 1773
TaaI ACNGT 3 cut(s) 83, 166, 1916
TaiI ACGT 1 cut(s) 121
TaqI TCGA 9 cut(s) 42, 300, 579, 661, 787, 1534, 1721, 1821, 1901
TatI WGTACW 1 cut(s) 751
TauI GCSGC 2 cut(s) 1709, 1850
TfiI GAWTC 6 cut(s) 297, 449, 616, 885, 1345, 1661
Tru1I TTAA 5 cut(s) 215, 474, 708, 920, 1055
Tru9I TTAA 5 cut(s) 215, 474, 708, 920, 1055
TscAI CASTG 2 cut(s) 1872, 1912
TseFI GTSAC 2 cut(s) 340, 1739
TseI GCWGC 2 cut(s) 320, 401
Tsp45I GTSAC 2 cut(s) 340, 1739
TspDTI ATGAA 5 cut(s) 210, 1295, 1310, 1458, 1534
TspGWI ACGGA 2 cut(s) 127, 359
TspRI CASTG 2 cut(s) 1872, 1912
XagI CCTNNNNNAGG 1 cut(s) 1652
XapI RAATTY 8 cut(s) 395, 427, 488, 654, 663, 1006, 1051, 1218
XcmI CCANNNNNNNNNTGG 1 cut(s) 751
XmiI GTMKAC 2 cut(s) 677, 1370
XmnI GAANNNNTTC 1 cut(s) 1349
XspI CTAG 2 cut(s) 359, 902
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.