Prupe.4G092600_v2.0.a1

Cyclic nucleotide-gated ion channel 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
OG0000119
Physical Location & Seq
Reverse (-)
4639054 .. 4646631
7578 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G092600.3

Sequence Viewer

Length: 1803 bp
ATGTCTTCACAGCGCCGTGAAGACGATGATCATCAGACTAATATCGCAAGCGACACACCAGGTAAACCTTACAATTTGGAAAATGTTGAGGGGCAGGCTCGATGTCCCGCATCCCAAATTGGAGAACTGTTTACAAAGAAGAAATGGGAATGCAAAGATCATTCAGCATCATTGTGGAACAAGATGATTGTAATTTCATGTGTTATTGCAATTTCCCTAGATCCCTTGTTCTTATACATTCCATTCATCGATGAGGATAACAAATGCCTTGGAATGGACAAAAAGTTGAGGAATGTGGCTCTGATTTTGCGATCTCTCACGGATATCACTTTCTTGGTGGATATTGGATATCAAATCATTCCAGGTATTAATAAAGCCTACGAGGTTATCAACCAAGGGAAGGAGCAATGGGAATTGGATTGGCAAGCAACGTTAATAAGAAGAGAGGAGATCATTCCATTTGCTGTGATATTAGCTCGGGAGTTGAATTGGTGTTCTTTGGTGACTGACCTTCTCTCTGTTTTTCCCATGCCACAACTTCTAGTAGGGTACCTTTTTTTCGAAATGAGAGAGCCGGGATATTTAGAACGGAGAAAGGTTGTCAATTTTCTTCTTCTGAGCCAGTATTTGCCAAGGATTTATCGAATTATCTTATCATCTAAGGAACTTACAAGGACTGCCGGAATAAGGGTTAAAGCCATATTCAATTTGTTTTTATACATTCTTGCTAGCCATGTTATTGGAGCTTTTTGGTACTTCTTTTCCGTTCAACGAGAGATTTCATGTTGGCATTCGGCTTGTGGAAAACAAACGGAATGCACAAGTACCTTTTATTGTGATGATGATCACAATACCACTACCACAATGATCAATTTGTTAAACACATCTTGTGGTATTTCGGACAGTAATCCGCAGTTTAATTATGGAATATTTCTTGATTCCATTAAAATTGGTAAAACGGAGCATATGCAATTTCCAACCAAGTTATGCTACTCTTTTTGGTGGGGTCTGAGAAATTTAAGCAACTTTGGCACGAATCTCACAACAAGTAGTTATTTGTGGGAAAACTTGTTTGCAATTCTAATTTCTATCACTGGCTTGCTATTATTTATATATCTCATTGGAAATGTTCAGACATTCATTCAGATGAGAACCACAAAATCGGAAGAAATAAGACAGAAGATTGATTTAAAAAAGGACGTGATAGAAACGTGGATGAAGAAAAATGATATTCATGATGATATGAAGAAGGAAATCATGAAAAACATAAATAAAAAATGGGAAGAGGATAAAGATGGTGTTCTGGAGAATATATTCAATGTTCTTCCCGATTATACGAAAAAATCTCTAAAGTATGAACTCTGCTTGAAAATTCTATCACAGGAACCACTTCTTAAACTTATGGATGACAAAGTGCTGAAAATGATGTGCGACTATCTGAAGCTAGTGACTTACAAAGCGGATCACATCATATTTCAAATGGATCACCCAATTAATCGCATGCTTCTCATTATAGAAGGCACTGTATTAACCTACAAACATACACGTGGTGACGAAACAACAAAAGATTCTGGTGCTGCCCCATCCCCATCTCCATCAATGATCACCAAGCTCCTTGGGAAAGGTGATGTTTATGGACAAGAGCTTCTGACGTGGTCGTCCAACCAATCTGGGATTCACAGTCATCCTATCTGCTCCGAAAATGTGCAATGTCAAACAAACGTAGAAGGCTTTGTTCTTTCAGCGGAGGACTTGGTAGAAGTCTCCAAATGCCAACGCTGGAAGTTAAACGATGACCCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
Ion_trans

Protein Analysis

601

Amino Acids

69.28

Weight (kDa)

6.12

Isoelectric Point (pI)

40.79

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000119)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g10570 FvH4_4g36390 FvH4_7g31840 FvH4_7g31840 FvH4_7g31850 FvH4_7g31850 FvH4_7g31861 FvH4_7g31861 FvH4_7g31950
malus_domestica MD01G1054600.v1.1 MD01G1221100.v1.1 MD01G1221400.v1.1 MD01G1221600.v1.1 MD01G1221800.v1.1 MD01G1222000.v1.1 MD01G1222100.v1.1 MD07G1140800.v1.1 MD07G1291200.v1.1 MD07G1291400.v1.1 MD07G1291500.v1.1 MD07G1291700.v1.1 MD07G1292500.v1.1 MD07G1292700.v1.1 MD07G1292800.v1.1 MD07G1292900.v1.1 MD08G1241600.v1.1 MD11G1083800.v1.1 MD15G1431600.v1.1
prunus_persica Prupe.1G017800_v2.0.a1 Prupe.1G017800_v2.0.a1 Prupe.1G162800_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312700_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G143000_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1
pyrus_communis pycom01g23050 pycom01g23070 pycom01g23090 pycom01g23100 pycom01g23110 pycom01g23120 pycom01g23170 pycom07g26410 pycom07g26440 pycom07g26470 pycom07g26480 pycom07g26490 pycom07g26500 pycom07g26510 pycom07g26530 pycom07g26540 pycom07g26570 pycom07g26580 pycom07g26590 pycom08g20940
rosa_chinensis RchiOBHm_Chr1g0324571 RchiOBHm_Chr1g0336181 RchiOBHm_Chr1g0381061 RchiOBHm_Chr1g0381091 RchiOBHm_Chr1g0381121 RchiOBHm_Chr1g0381131 RchiOBHm_Chr1g0381141 RchiOBHm_Chr1g0381161 RchiOBHm_Chr1g0381211 RchiOBHm_Chr2g0110361 RchiOBHm_Chr2g0120231 RchiOBHm_Chr3g0486281 RchiOBHm_Chr3g0486311 RchiOBHm_Chr3g0486401 RchiOBHm_Chr4g0409511 RchiOBHm_Chr4g0409521 RchiOBHm_Chr5g0017271 RchiOBHm_Chr5g0048781 RchiOBHm_Chr5g0048811
rosa_laevigata RLG00000002401 RLG00000008559 RLG00000017798 RLG00000017799 RLG00000023082 RLG00000023088 RLG00000026230 RLG00000026238 RLG00000026240 RLG00000026241 RLG00000026242 RLG00000026243 RLG00000026244 RLG00000026246 RLG00000026247 RLG00000026248 RLG00000029876 RLG00000030189 RLG00000034579
rosa_multiflora Rmu_co8101374.1_g000001 Rmu_co8309149.1_g000001 Rmu_co8450063.1_g000001 Rmu_sc0000441.1_g000094 Rmu_sc0000479.1_g000005 Rmu_sc0000647.1_g000006 Rmu_sc0001393.1_g000031 Rmu_sc0001423.1_g000037 Rmu_sc0001616.1_g000015 Rmu_sc0001857.1_g000011 Rmu_sc0002183.1_g000013 Rmu_sc0002183.1_g000028 Rmu_sc0002183.1_g000030 Rmu_sc0002688.1_g000003 Rmu_sc0002688.1_g000020 Rmu_sc0003801.1_g000003 Rmu_sc0003801.1_g000004 Rmu_sc0004125.1_g000006 Rmu_sc0004494.1_g000005 Rmu_sc0004494.1_g000006 Rmu_sc0004494.1_g000008 Rmu_sc0004494.1_g000009 Rmu_sc0005842.1_g000004 Rmu_sc0006872.1_g000001 Rmu_sc0006872.1_g000005 Rmu_sc0006872.1_g000009 Rmu_sc0006872.1_g000010 Rmu_sc0008053.1_g000026
rosa_roxburghii Rroxscaffold_159G00432960 Rroxscaffold_1G00033060 Rroxscaffold_2G00123150 Rroxscaffold_2G00123170 Rroxscaffold_2G00133500 Rroxscaffold_2G00133550 Rroxscaffold_4G00278650 Rroxscaffold_4G00278750 Rroxscaffold_4G00278790 Rroxscaffold_4G00278800 Rroxscaffold_4G00278810 Rroxscaffold_4G00325390 Rroxscaffold_5G00354010 Rroxscaffold_6G00395890 Rroxscaffold_6G00395900 Rroxscaffold_6G00395920
rosa_rugosa Rorug01G0046900.1 Rorug01G0427000 Rorug01G0427100 Rorug01G0427200 Rorug01G0427300 Rorug01G0427400 Rorug01G0427500 Rorug01G0427500 Rorug01G0427600 Rorug01G0427600 Rorug01G0427700 Rorug01G0427700 Rorug01G0427800 Rorug01G0428700 Rorug02G0166400 Rorug02G0166500 Rorug02G0166500 Rorug02G0166600 Rorug02G0166600 Rorug02G0166700 Rorug02G0167300 Rorug02G0167300 Rorug02G0167300 Rorug03G0224600 Rorug03G0224600 Rorug04G0094400 Rorug05G0241100 Rorug05G0241200
rosa_samantha Rh1BG407700 Rh1BG407900 Rh1BG409000 Rh1CG064700 Rh1CG420900 Rh1CG421000 Rh1CG421200 Rh1CG421300 Rh1CG421800 Rh1CG421900 Rh1CG422000 Rh1CG422200 Rh1CG422300 Rh1CG423600 Rh1DG437600 Rh1DG438900 Rh1DG439000 Rh1DG440300 Rh2AG219100 Rh2CG220700 Rh2DG225300 Rh3AG274400 Rh3AG274600 Rh3CG308900 Rh3DG305800 Rh4AG156400 Rh5AG129000 Rh5AG320900 Rh5CG139600
rosa_wichuraiana Rw1G005300 Rw1G039280 Rw1G039300 Rw1G039310 Rw1G039320 Rw1G039330 Rw1G039340 Rw1G039360 Rw1G039390 Rw2G016910 Rw2G022800 Rw3G024330 Rw3G024340 Rw3G024350 Rw3G024400 Rw4G012810 Rw5G030120 Rw5G030280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1657
Acc65I GGTACC 1 cut(s) 549
AccB1I GGYRCC 1 cut(s) 549
AciI CCGC 4 cut(s) 108, 911, 1460, 1745
AclI AACGTT 1 cut(s) 431
AclWI GGATC 3 cut(s) 215, 1470, 1491
AcsI RAATTY 2 cut(s) 1015, 1371
AcuI CTGAAG 1 cut(s) 1460
AcvI CACGTG 1 cut(s) 1547
AdeI CACNNNGTG 1 cut(s) 1550
AfaI GTAC 3 cut(s) 551, 755, 826
AfiI CCNNNNNNNGG 3 cut(s) 274, 400, 687
AflIII ACRYGT 1 cut(s) 1544
AgsI TTSAA 6 cut(s) 487, 706, 770, 1318, 1369, 1478
AjiI CACGTC 2 cut(s) 1201, 1653
AjnI CCWGG 2 cut(s) 58, 361
AjuI GAANNNNNNNTTGG 2 cut(s) 1659, 1691
AluBI AGCT 5 cut(s) 476, 746, 1444, 1612, 1645
AluI AGCT 5 cut(s) 476, 746, 1444, 1612, 1645
Alw26I GTCTC 1 cut(s) 1768
AlwI GGATC 3 cut(s) 215, 1470, 1491
Ama87I CYCGRG 1 cut(s) 477
ApeKI GCWGC 1 cut(s) 1577
ApoI RAATTY 2 cut(s) 1015, 1371
AseI ATTAAT 2 cut(s) 369, 1494
Asp700I GAANNNNTTC 2 cut(s) 1313, 1389
Asp718I GGTACC 1 cut(s) 549
AspLEI GCGC 1 cut(s) 15
AsuC2I CCSGG 1 cut(s) 576
AsuHPI GGTGA 5 cut(s) 514, 1478, 1562, 1597, 1637
AsuII TTCGAA 1 cut(s) 561
AsuNHI GCTAGC 1 cut(s) 728
AvaI CYCGRG 1 cut(s) 477
BanI GGYRCC 1 cut(s) 549
BbrPI CACGTG 1 cut(s) 1547
BbsI GAAGAC 1 cut(s) 27
BbvI GCAGC 1 cut(s) 1564
BccI CCATC 4 cut(s) 1289, 1591, 1597, 1603
BciT130I CCWGG 2 cut(s) 60, 363
BclI TGATCA 4 cut(s) 28, 844, 867, 1602
BcnI CCSGG 1 cut(s) 576
BcoDI GTCTC 1 cut(s) 1768
BfaI CTAG 4 cut(s) 218, 542, 729, 1445
BfoI RGCGCY 1 cut(s) 16
BisI GCNGC 1 cut(s) 1578
BlsI GCNGC 1 cut(s) 1579
Bme1390I CCNGG 3 cut(s) 60, 363, 576
BmeT110I CYCGRG 1 cut(s) 477
BmgBI CACGTC 2 cut(s) 1201, 1653
BmiI GGNNCC 2 cut(s) 551, 1386
BmrFI CCNGG 3 cut(s) 60, 363, 576
BmsI GCATC 2 cut(s) 119, 176
BmtI GCTAGC 1 cut(s) 732
BpiI GAAGAC 1 cut(s) 27
BpmI CTGGAG 1 cut(s) 1325
Bpu14I TTCGAA 1 cut(s) 561
BpuMI CCSGG 1 cut(s) 576
Bsa29I ATCGAT 1 cut(s) 249
BsaAI YACGTR 1 cut(s) 1547
BsaBI GATNNNNATC 2 cut(s) 30, 843
BsaJI CCNNGG 4 cut(s) 268, 394, 632, 1615
Bsc4I CCNNNNNNNGG 3 cut(s) 274, 400, 687
Bse1I ACTGG 2 cut(s) 622, 1099
Bse3DI GCAATG 2 cut(s) 413, 1715
Bse8I GATNNNNATC 2 cut(s) 30, 843
BseBI CCWGG 2 cut(s) 60, 363
BseCI ATCGAT 1 cut(s) 249
BseDI CCNNGG 4 cut(s) 268, 394, 632, 1615
BseGI GGATG 5 cut(s) 110, 1221, 1411, 1583, 1684
BseJI GATNNNNATC 2 cut(s) 30, 843
BseLI CCNNNNNNNGG 3 cut(s) 274, 400, 687
BseMI GCAATG 2 cut(s) 413, 1715
BseMII CTCAG 2 cut(s) 608, 1001
BseNI ACTGG 2 cut(s) 622, 1099
BseRI GAGGAG 1 cut(s) 461
BseXI GCAGC 1 cut(s) 1564
BshNI GGYRCC 1 cut(s) 549
BshVI ATCGAT 1 cut(s) 249
BsiHKCI CYCGRG 1 cut(s) 477
BsiSI CCGG 2 cut(s) 575, 681
BslFI GGGAC 1 cut(s) 90
BslI CCNNNNNNNGG 3 cut(s) 274, 400, 687
BsmAI GTCTC 1 cut(s) 1768
BsmFI GGGAC 1 cut(s) 90
BsmI GAATGC 3 cut(s) 155, 790, 821
BsoBI CYCGRG 1 cut(s) 477
Bsp119I TTCGAA 1 cut(s) 561
BspACI CCGC 4 cut(s) 108, 911, 1460, 1745
BspCNI CTCAG 2 cut(s) 609, 1002
BspDI ATCGAT 1 cut(s) 249
BspHI TCATGA 2 cut(s) 1234, 1257
BspLI GGNNCC 2 cut(s) 551, 1386
BspOI GCTAGC 1 cut(s) 732
BspPI GGATC 3 cut(s) 215, 1470, 1491
BspT104I TTCGAA 1 cut(s) 561
BspT107I GGYRCC 1 cut(s) 549
BsrDI GCAATG 2 cut(s) 413, 1715
BsrI ACTGG 2 cut(s) 622, 1099
BssECI CCNNGG 4 cut(s) 268, 394, 632, 1615
BssT1I CCWWGG 4 cut(s) 268, 394, 632, 1615
Bst2UI CCWGG 2 cut(s) 60, 363
Bst4CI ACNGT 4 cut(s) 129, 905, 1525, 1682
Bst6I CTCTTC 2 cut(s) 436, 1278
BstBAI YACGTR 1 cut(s) 1547
BstBI TTCGAA 1 cut(s) 561
BstC8I GCNNGC 6 cut(s) 49, 96, 426, 730, 1100, 1502
BstDEI CTNAG 3 cut(s) 617, 660, 1010
BstF5I GGATG 5 cut(s) 110, 1221, 1411, 1583, 1684
BstH2I RGCGCY 1 cut(s) 16
BstHHI GCGC 1 cut(s) 15
BstMAI GTCTC 1 cut(s) 1768
BstMWI GCNNNNNNNGC 1 cut(s) 1029
BstNI CCWGG 2 cut(s) 60, 363
BstNSI RCATGY 1 cut(s) 1504
BstSCI CCNGG 3 cut(s) 58, 361, 574
BstV1I GCAGC 1 cut(s) 1564
BstV2I GAAGAC 1 cut(s) 27
BstX2I RGATCY 1 cut(s) 220
BstXI CCANNNNNNTGG 1 cut(s) 740
BstYI RGATCY 1 cut(s) 220
Bsu15I ATCGAT 1 cut(s) 249
BsuTUI ATCGAT 1 cut(s) 249
BtrI CACGTC 2 cut(s) 1201, 1653
BtsCI GGATG 5 cut(s) 110, 1221, 1411, 1583, 1684
BtsIMutI CAGTG 2 cut(s) 1092, 1521
Cac8I GCNNGC 6 cut(s) 49, 96, 426, 730, 1100, 1502
CciI TCATGA 2 cut(s) 1234, 1257
CfoI GCGC 1 cut(s) 15
ClaI ATCGAT 1 cut(s) 249
CsiI ACCWGGT 1 cut(s) 58
Csp6I GTAC 3 cut(s) 550, 754, 825
CviAII CATG 7 cut(s) 198, 529, 734, 783, 1235, 1258, 1501
CviQI GTAC 3 cut(s) 550, 754, 825
DdeI CTNAG 3 cut(s) 617, 660, 1010
DraI TTTAAA 1 cut(s) 1191
DraIII CACNNNGTG 1 cut(s) 1550
DrdI GACNNNNNNGTC 1 cut(s) 1657
DseDI GACNNNNNNGTC 1 cut(s) 1657
Eam1104I CTCTTC 2 cut(s) 436, 1278
EarI CTCTTC 2 cut(s) 436, 1278
Eco130I CCWWGG 4 cut(s) 268, 394, 632, 1615
Eco32I GATATC 2 cut(s) 325, 350
Eco57I CTGAAG 1 cut(s) 1460
Eco72I CACGTG 1 cut(s) 1547
Eco88I CYCGRG 1 cut(s) 477
EcoRII CCWGG 2 cut(s) 58, 361
EcoRV GATATC 2 cut(s) 325, 350
EcoT14I CCWWGG 4 cut(s) 268, 394, 632, 1615
ErhI CCWWGG 4 cut(s) 268, 394, 632, 1615
FaeI CATG 7 cut(s) 201, 532, 737, 786, 1238, 1261, 1504
FaqI GGGAC 1 cut(s) 90
FatI CATG 7 cut(s) 197, 528, 733, 782, 1234, 1257, 1500
FauI CCCGC 1 cut(s) 115
FauNDI CATATG 1 cut(s) 966
FbaI TGATCA 4 cut(s) 28, 844, 867, 1602
Fnu4HI GCNGC 1 cut(s) 1578
FokI GGATG 5 cut(s) 97, 1228, 1418, 1570, 1671
Fsp4HI GCNGC 1 cut(s) 1578
FspBI CTAG 4 cut(s) 218, 542, 729, 1445
GlaI GCGC 1 cut(s) 14
GluI GCNGC 1 cut(s) 1578
GsuI CTGGAG 1 cut(s) 1325
HaeII RGCGCY 1 cut(s) 16
HapII CCGG 2 cut(s) 575, 681
HhaI GCGC 1 cut(s) 15
Hin1II CATG 7 cut(s) 201, 532, 737, 786, 1238, 1261, 1504
Hin6I GCGC 1 cut(s) 13
HinP1I GCGC 1 cut(s) 13
HinfI GANTC 4 cut(s) 938, 1036, 1568, 1675
HpaII CCGG 2 cut(s) 575, 681
HphI GGTGA 5 cut(s) 514, 1478, 1562, 1597, 1637
Hpy166II GTNNAC 2 cut(s) 65, 132
Hpy188III TCNNGA 6 cut(s) 479, 935, 1235, 1258, 1304, 1328
Hpy8I GTNNAC 2 cut(s) 65, 132
HpyAV CCTTC 5 cut(s) 394, 521, 1243, 1511, 1721
HpyCH4III ACNGT 4 cut(s) 129, 905, 1525, 1682
HpyCH4IV ACGT 6 cut(s) 431, 1200, 1211, 1546, 1652, 1722
HpyCH4V TGCA 6 cut(s) 153, 209, 819, 970, 1076, 1708
HpyF10VI GCNNNNNNNGC 1 cut(s) 1029
HpyF3I CTNAG 3 cut(s) 617, 660, 1010
HpySE526I ACGT 6 cut(s) 431, 1200, 1211, 1546, 1652, 1722
Hsp92II CATG 7 cut(s) 201, 532, 737, 786, 1238, 1261, 1504
HspAI GCGC 1 cut(s) 13
KpnI GGTACC 1 cut(s) 553
Ksp22I TGATCA 4 cut(s) 28, 844, 867, 1602
LmnI GCTCC 5 cut(s) 403, 743, 961, 1617, 1700
Lsp1109I GCAGC 1 cut(s) 1564
LweI GCATC 2 cut(s) 119, 176
MabI ACCWGGT 1 cut(s) 58
MaeI CTAG 4 cut(s) 218, 542, 729, 1445
MaeII ACGT 6 cut(s) 431, 1200, 1211, 1546, 1652, 1722
MaeIII GTNAC 3 cut(s) 502, 1447, 1550
MflI RGATCY 1 cut(s) 220
MmeI TCCRAC 2 cut(s) 1001, 1686
MnlI CCTC 7 cut(s) 82, 247, 282, 376, 439, 1279, 1741
MroXI GAANNNNTTC 2 cut(s) 1313, 1389
MslI CAYNNNNRTG 3 cut(s) 172, 1145, 1545
MspA1I CMGCKG 1 cut(s) 1745
MspI CCGG 2 cut(s) 575, 681
MspR9I CCNGG 3 cut(s) 60, 363, 576
Mva1269I GAATGC 3 cut(s) 155, 790, 821
MvaI CCWGG 2 cut(s) 60, 363
MwoI GCNNNNNNNGC 1 cut(s) 1029
NciI CCSGG 1 cut(s) 576
NdeI CATATG 1 cut(s) 966
NheI GCTAGC 1 cut(s) 728
NlaIII CATG 7 cut(s) 201, 532, 737, 786, 1238, 1261, 1504
NlaIV GGNNCC 2 cut(s) 551, 1386
NmuCI GTSAC 3 cut(s) 502, 1447, 1550
NspI RCATGY 1 cut(s) 1504
NspV TTCGAA 1 cut(s) 561
PaeI GCATGC 1 cut(s) 1504
PagI TCATGA 2 cut(s) 1234, 1257
PctI GAATGC 3 cut(s) 155, 790, 821
PdmI GAANNNNTTC 2 cut(s) 1313, 1389
PfeI GAWTC 4 cut(s) 938, 1036, 1568, 1675
PflFI GACNNNGTC 1 cut(s) 1654
PkrI GCNGC 1 cut(s) 1579
PmaCI CACGTG 1 cut(s) 1547
PmlI CACGTG 1 cut(s) 1547
Ppu21I YACGTR 1 cut(s) 1547
PshBI ATTAAT 2 cut(s) 369, 1494
Psp1406I AACGTT 1 cut(s) 431
Psp6I CCWGG 2 cut(s) 58, 361
PspCI CACGTG 1 cut(s) 1547
PspGI CCWGG 2 cut(s) 58, 361
PspN4I GGNNCC 2 cut(s) 551, 1386
PsuI RGATCY 1 cut(s) 220
PsyI GACNNNGTC 1 cut(s) 1654
RsaI GTAC 3 cut(s) 551, 755, 826
RsaNI GTAC 3 cut(s) 550, 754, 825
RseI CAYNNNNRTG 3 cut(s) 172, 1145, 1545
SatI GCNGC 1 cut(s) 1578
ScrFI CCNGG 3 cut(s) 60, 363, 576
SexAI ACCWGGT 1 cut(s) 58
SfaNI GCATC 2 cut(s) 119, 176
SfuI TTCGAA 1 cut(s) 561
SmiMI CAYNNNNRTG 3 cut(s) 172, 1145, 1545
SphI GCATGC 1 cut(s) 1504
SsiI CCGC 4 cut(s) 108, 911, 1460, 1745
SspI AATATT 1 cut(s) 930
SspMI CTAG 4 cut(s) 218, 542, 729, 1445
StyD4I CCNGG 3 cut(s) 58, 361, 574
StyI CCWWGG 4 cut(s) 268, 394, 632, 1615
TaaI ACNGT 4 cut(s) 129, 905, 1525, 1682
TaiI ACGT 6 cut(s) 434, 1203, 1214, 1549, 1655, 1725
TaqI TCGA 4 cut(s) 100, 249, 561, 643
TfiI GAWTC 4 cut(s) 938, 1036, 1568, 1675
TscAI CASTG 2 cut(s) 1099, 1528
TseFI GTSAC 3 cut(s) 502, 1447, 1550
TseI GCWGC 1 cut(s) 1577
Tsp45I GTSAC 3 cut(s) 502, 1447, 1550
TspDTI ATGAA 9 cut(s) 186, 235, 771, 1129, 1223, 1232, 1259, 1274, 1371
TspGWI ACGGA 5 cut(s) 335, 604, 754, 827, 974
TspRI CASTG 2 cut(s) 1099, 1528
Tth111I GACNNNGTC 1 cut(s) 1654
VspI ATTAAT 2 cut(s) 369, 1494
XapI RAATTY 2 cut(s) 1015, 1371
XceI RCATGY 1 cut(s) 1504
XmnI GAANNNNTTC 2 cut(s) 1313, 1389
XspI CTAG 4 cut(s) 218, 542, 729, 1445
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.