Rmu_sc0000441.1_g000094

Cyclic nucleotide-gated ion channel 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000441.1
OG0000119
Physical Location & Seq
Forward (+)
339234 .. 342191
2958 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000441.1_g000094.1.cds

Sequence Viewer

Length: 1443 bp
atgttcgtaattgcatgtgtgattgcagtctcattagacccattgttcttctacattccagtcatcgatgaagaagaaaagtgccttgcagaagacaaagagttgaggactatagctctcattttgcgatcgctcactgatgtcactttcgtagtgaatatcatatatcatgtttgcgaagccattaacgctgcctacaaagtacacaaagaaaagaagtctgatgaatcggcatgggattgggaattttcgaaggtatcagcagctgatataattccatttgctaaattagttgctgggaagctagcatggcgctccacgctaaccagcattttagctgtttttcccatgccacaactgcttctagtatttgtctttttcaaaatgagaggccatggatacttggagcatagaaagattggtcacaatactactgcaagaaataatgccgcattccttaatcaattttgccctataattgttgaagagaatgctaaggccccttttgattttggaatatttttggattccctcaaaaatggtatcactgggcatataaattttggaacgaagttatcttactctttttggtggggtctacgtaatctaagtaattttggcacaaatctcgaaacaagtacctatgtgtgggaaacttgctttgcagcttttatttctgtcattggcttgctactatttctatatctcattggaaatgtacagacatttatctccatggaaactcaaagatgggaggacataagaaacaagatacaattgaaaaaggaagatatagcagaatggatgggcaaaaatgagctcccagacgatatgaagaaagtaattatgaagaacatagagcaaaaactggaagagaacaaagatactgatcttgagaatcttttctctattcttccgatgtctaccaaaaagtgtctacagcgtttcctcggcatgaaactgctaaagaaagtaccgaagcttgcaaggatggatgaaagagtgttgaatatgatgtgtgaccatctaaagccaatgatgtatgacgagggcaccgaggttttccaaatgggagctccactaaatagcatgctactcattacagaaggcacattattgacctacagaactaacagtgatgattttgcaactgaaaacgcaaacacgagtagtatttcaagttccccgtcagtgggcaaccttgacaaaggtgaattttacggcgccgaagaactgatcgagtgggtaatacaaaagaaggatttaggccagcttgccgtctctgccttgaatgtgaaatgcgagtcgaaagtagaaggctttgttctcacggccaaggacttgaaaagtgtagtttccaaatgcgaaaactggtgggaagttggcattaggaagttagaccagattgtgcaacagaaacctagagtgaatccccagtactag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
Ion_trans

Protein Analysis

480

Amino Acids

54.79

Weight (kDa)

5.94

Isoelectric Point (pI)

31.71

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000119)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g10570 FvH4_4g36390 FvH4_7g31840 FvH4_7g31840 FvH4_7g31850 FvH4_7g31850 FvH4_7g31861 FvH4_7g31861 FvH4_7g31950
malus_domestica MD01G1054600.v1.1 MD01G1221100.v1.1 MD01G1221400.v1.1 MD01G1221600.v1.1 MD01G1221800.v1.1 MD01G1222000.v1.1 MD01G1222100.v1.1 MD07G1140800.v1.1 MD07G1291200.v1.1 MD07G1291400.v1.1 MD07G1291500.v1.1 MD07G1291700.v1.1 MD07G1292500.v1.1 MD07G1292700.v1.1 MD07G1292800.v1.1 MD07G1292900.v1.1 MD08G1241600.v1.1 MD11G1083800.v1.1 MD15G1431600.v1.1
prunus_persica Prupe.1G017800_v2.0.a1 Prupe.1G017800_v2.0.a1 Prupe.1G162800_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312700_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G143000_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1
pyrus_communis pycom01g23050 pycom01g23070 pycom01g23090 pycom01g23100 pycom01g23110 pycom01g23120 pycom01g23170 pycom07g26410 pycom07g26440 pycom07g26470 pycom07g26480 pycom07g26490 pycom07g26500 pycom07g26510 pycom07g26530 pycom07g26540 pycom07g26570 pycom07g26580 pycom07g26590 pycom08g20940
rosa_chinensis RchiOBHm_Chr1g0324571 RchiOBHm_Chr1g0336181 RchiOBHm_Chr1g0381061 RchiOBHm_Chr1g0381091 RchiOBHm_Chr1g0381121 RchiOBHm_Chr1g0381131 RchiOBHm_Chr1g0381141 RchiOBHm_Chr1g0381161 RchiOBHm_Chr1g0381211 RchiOBHm_Chr2g0110361 RchiOBHm_Chr2g0120231 RchiOBHm_Chr3g0486281 RchiOBHm_Chr3g0486311 RchiOBHm_Chr3g0486401 RchiOBHm_Chr4g0409511 RchiOBHm_Chr4g0409521 RchiOBHm_Chr5g0017271 RchiOBHm_Chr5g0048781 RchiOBHm_Chr5g0048811
rosa_laevigata RLG00000002401 RLG00000008559 RLG00000017798 RLG00000017799 RLG00000023082 RLG00000023088 RLG00000026230 RLG00000026238 RLG00000026240 RLG00000026241 RLG00000026242 RLG00000026243 RLG00000026244 RLG00000026246 RLG00000026247 RLG00000026248 RLG00000029876 RLG00000030189 RLG00000034579
rosa_multiflora Rmu_co8101374.1_g000001 Rmu_co8309149.1_g000001 Rmu_co8450063.1_g000001 Rmu_sc0000441.1_g000094 Rmu_sc0000479.1_g000005 Rmu_sc0000647.1_g000006 Rmu_sc0001393.1_g000031 Rmu_sc0001423.1_g000037 Rmu_sc0001616.1_g000015 Rmu_sc0001857.1_g000011 Rmu_sc0002183.1_g000013 Rmu_sc0002183.1_g000028 Rmu_sc0002183.1_g000030 Rmu_sc0002688.1_g000003 Rmu_sc0002688.1_g000020 Rmu_sc0003801.1_g000003 Rmu_sc0003801.1_g000004 Rmu_sc0004125.1_g000006 Rmu_sc0004494.1_g000005 Rmu_sc0004494.1_g000006 Rmu_sc0004494.1_g000008 Rmu_sc0004494.1_g000009 Rmu_sc0005842.1_g000004 Rmu_sc0006872.1_g000001 Rmu_sc0006872.1_g000005 Rmu_sc0006872.1_g000009 Rmu_sc0006872.1_g000010 Rmu_sc0008053.1_g000026
rosa_roxburghii Rroxscaffold_159G00432960 Rroxscaffold_1G00033060 Rroxscaffold_2G00123150 Rroxscaffold_2G00123170 Rroxscaffold_2G00133500 Rroxscaffold_2G00133550 Rroxscaffold_4G00278650 Rroxscaffold_4G00278750 Rroxscaffold_4G00278790 Rroxscaffold_4G00278800 Rroxscaffold_4G00278810 Rroxscaffold_4G00325390 Rroxscaffold_5G00354010 Rroxscaffold_6G00395890 Rroxscaffold_6G00395900 Rroxscaffold_6G00395920
rosa_rugosa Rorug01G0046900.1 Rorug01G0427000 Rorug01G0427100 Rorug01G0427200 Rorug01G0427300 Rorug01G0427400 Rorug01G0427500 Rorug01G0427500 Rorug01G0427600 Rorug01G0427600 Rorug01G0427700 Rorug01G0427700 Rorug01G0427800 Rorug01G0428700 Rorug02G0166400 Rorug02G0166500 Rorug02G0166500 Rorug02G0166600 Rorug02G0166600 Rorug02G0166700 Rorug02G0167300 Rorug02G0167300 Rorug02G0167300 Rorug03G0224600 Rorug03G0224600 Rorug04G0094400 Rorug05G0241100 Rorug05G0241200
rosa_samantha Rh1BG407700 Rh1BG407900 Rh1BG409000 Rh1CG064700 Rh1CG420900 Rh1CG421000 Rh1CG421200 Rh1CG421300 Rh1CG421800 Rh1CG421900 Rh1CG422000 Rh1CG422200 Rh1CG422300 Rh1CG423600 Rh1DG437600 Rh1DG438900 Rh1DG439000 Rh1DG440300 Rh2AG219100 Rh2CG220700 Rh2DG225300 Rh3AG274400 Rh3AG274600 Rh3CG308900 Rh3DG305800 Rh4AG156400 Rh5AG129000 Rh5AG320900 Rh5CG139600
rosa_wichuraiana Rw1G005300 Rw1G039280 Rw1G039300 Rw1G039310 Rw1G039320 Rw1G039330 Rw1G039340 Rw1G039360 Rw1G039390 Rw2G016910 Rw2G022800 Rw3G024330 Rw3G024340 Rw3G024350 Rw3G024400 Rw4G012810 Rw5G030120 Rw5G030280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 1052, 1223
AccI GTMKAC 3 cut(s) 598, 923, 937
AciI CCGC 1 cut(s) 450
AcoI YGGCCR 1 cut(s) 1332
AcsI RAATTY 3 cut(s) 245, 559, 1214
AcyI GRCGYC 1 cut(s) 1224
AfaI GTAC 5 cut(s) 204, 640, 720, 975, 1439
AfiI CCNNNNNNNGG 3 cut(s) 648, 1192, 1193
AgsI TTSAA 7 cut(s) 382, 485, 781, 1009, 1179, 1291, 1345
AluBI AGCT 9 cut(s) 116, 266, 304, 338, 668, 820, 982, 1076, 1273
AluI AGCT 9 cut(s) 116, 266, 304, 338, 668, 820, 982, 1076, 1273
Alw21I GWGCWC 2 cut(s) 822, 1078
Alw26I GTCTC 2 cut(s) 34, 1285
AlwNI CAGNNNCTG 1 cut(s) 266
AoxI GGCC 4 cut(s) 391, 498, 1267, 1332
ApeKI GCWGC 3 cut(s) 191, 263, 665
ApoI RAATTY 3 cut(s) 245, 559, 1214
AsiSI GCGATCGC 1 cut(s) 131
Asp700I GAANNNNTTC 1 cut(s) 902
AspLEI GCGC 2 cut(s) 315, 1226
AspS9I GGNCC 1 cut(s) 499
AsuHPI GGTGA 1 cut(s) 1223
AsuII TTCGAA 1 cut(s) 251
AsuNHI GCTAGC 1 cut(s) 304
BaeGI GKGCMC 1 cut(s) 1055
BanI GGYRCC 2 cut(s) 1052, 1223
BanII GRGCYC 2 cut(s) 822, 1078
BarI GAAGNNNNNNTAC 2 cut(s) 563, 595
BauI CACGAG 1 cut(s) 1165
BbsI GAAGAC 1 cut(s) 99
Bbv12I GWGCWC 2 cut(s) 822, 1078
BbvI GCAGC 3 cut(s) 178, 275, 677
BccI CCATC 4 cut(s) 744, 799, 985, 1032
BceAI ACGGC 3 cut(s) 1237, 1262, 1347
BcgI CGANNNNNNTGC 2 cut(s) 610, 644
BciVI GTATCC 1 cut(s) 392
BcoDI GTCTC 2 cut(s) 34, 1285
BfaI CTAG 4 cut(s) 305, 365, 1422, 1441
BfmI CTRYAG 3 cut(s) 111, 938, 1123
BfoI RGCGCY 2 cut(s) 316, 1227
BfuI GTATCC 1 cut(s) 392
BisI GCNGC 4 cut(s) 192, 264, 450, 666
BlsI GCNGC 4 cut(s) 193, 265, 451, 667
BmcAI AGTACT 1 cut(s) 1439
BmgT120I GGNCC 1 cut(s) 499
BmiI GGNNCC 3 cut(s) 501, 1054, 1225
BmrI ACTGGG 2 cut(s) 558, 1429
BmtI GCTAGC 1 cut(s) 308
BmuI ACTGGG 2 cut(s) 558, 1429
BpiI GAAGAC 1 cut(s) 99
Bpu10I CCTNAGC 1 cut(s) 495
Bpu14I TTCGAA 1 cut(s) 251
BpuEI CTTGAG 1 cut(s) 914
Bsa29I ATCGAT 1 cut(s) 66
BsaAI YACGTR 1 cut(s) 602
BsaBI GATNNNNATC 1 cut(s) 888
BsaHI GRCGYC 1 cut(s) 1224
BsaJI CCNNGG 5 cut(s) 394, 735, 949, 1056, 1335
Bsc4I CCNNNNNNNGG 3 cut(s) 648, 1192, 1193
Bse1I ACTGG 5 cut(s) 59, 553, 873, 1376, 1435
Bse8I GATNNNNATC 1 cut(s) 888
BseCI ATCGAT 1 cut(s) 66
BseDI CCNNGG 5 cut(s) 394, 735, 949, 1056, 1335
BseGI GGATG 3 cut(s) 810, 996, 1000
BseJI GATNNNNATC 1 cut(s) 888
BseLI CCNNNNNNNGG 3 cut(s) 648, 1192, 1193
BseNI ACTGG 5 cut(s) 59, 553, 873, 1376, 1435
BseSI GKGCMC 1 cut(s) 1055
BseXI GCAGC 3 cut(s) 178, 275, 677
BseYI CCCAGC 1 cut(s) 296
Bsh1285I CGRYCG 1 cut(s) 131
BshFI GGCC 4 cut(s) 393, 500, 1269, 1334
BshNI GGYRCC 2 cut(s) 1052, 1223
BshVI ATCGAT 1 cut(s) 66
BsiEI CGRYCG 1 cut(s) 131
BsiHKAI GWGCWC 2 cut(s) 822, 1078
BslI CCNNNNNNNGG 3 cut(s) 648, 1192, 1193
BsmAI GTCTC 2 cut(s) 34, 1285
BsmBI CGTCTC 1 cut(s) 1285
BsmI GAATGC 2 cut(s) 452, 496
BsnI GGCC 4 cut(s) 393, 500, 1269, 1334
Bsp119I TTCGAA 1 cut(s) 251
Bsp1286I GDGCHC 3 cut(s) 822, 1055, 1078
Bsp1407I TGTACA 1 cut(s) 718
Bsp143I GATC 3 cut(s) 128, 889, 1236
Bsp19I CCATGG 2 cut(s) 394, 735
BspACI CCGC 1 cut(s) 450
BspANI GGCC 4 cut(s) 393, 500, 1269, 1334
BspDI ATCGAT 1 cut(s) 66
BspLI GGNNCC 3 cut(s) 501, 1054, 1225
BspOI GCTAGC 1 cut(s) 308
BspT104I TTCGAA 1 cut(s) 251
BspT107I GGYRCC 2 cut(s) 1052, 1223
BsrGI TGTACA 1 cut(s) 718
BsrI ACTGG 5 cut(s) 59, 553, 873, 1376, 1435
BssECI CCNNGG 5 cut(s) 394, 735, 949, 1056, 1335
BssMI GATC 3 cut(s) 128, 889, 1236
BssNI GRCGYC 1 cut(s) 1224
BssSI CACGAG 1 cut(s) 1165
BssT1I CCWWGG 3 cut(s) 394, 735, 1335
Bst2BI CACGAG 1 cut(s) 1165
Bst4CI ACNGT 1 cut(s) 1136
Bst6I CTCTTC 2 cut(s) 480, 867
BstACI GRCGYC 1 cut(s) 1224
BstAUI TGTACA 1 cut(s) 718
BstBAI YACGTR 1 cut(s) 602
BstBI TTCGAA 1 cut(s) 251
BstC8I GCNNGC 6 cut(s) 306, 689, 984, 1091, 1271, 1275
BstDEI CTNAG 2 cut(s) 495, 608
BstDSI CCRYGG 2 cut(s) 394, 735
BstF5I GGATG 3 cut(s) 810, 996, 1000
BstH2I RGCGCY 2 cut(s) 316, 1227
BstHHI GCGC 2 cut(s) 315, 1226
BstKTI GATC 3 cut(s) 131, 892, 1239
BstMAI GTCTC 2 cut(s) 34, 1285
BstMBI GATC 3 cut(s) 128, 889, 1236
BstMCI CGRYCG 1 cut(s) 131
BstMWI GCNNNNNNNGC 5 cut(s) 188, 310, 319, 358, 1283
BstNSI RCATGY 2 cut(s) 18, 1093
BstSFI CTRYAG 3 cut(s) 111, 938, 1123
BstSLI GKGCMC 1 cut(s) 1055
BstSNI TACGTA 1 cut(s) 602
BstV1I GCAGC 3 cut(s) 178, 275, 677
BstV2I GAAGAC 1 cut(s) 99
Bsu15I ATCGAT 1 cut(s) 66
BsuI GTATCC 1 cut(s) 392
BsuRI GGCC 4 cut(s) 393, 500, 1269, 1334
BsuTUI ATCGAT 1 cut(s) 66
BtgI CCRYGG 2 cut(s) 394, 735
BtsCI GGATG 3 cut(s) 810, 996, 1000
BtsIMutI CAGTG 4 cut(s) 135, 546, 1141, 1197
Cac8I GCNNGC 6 cut(s) 306, 689, 984, 1091, 1271, 1275
CaiI CAGNNNCTG 1 cut(s) 266
CfoI GCGC 2 cut(s) 315, 1226
Cfr13I GGNCC 1 cut(s) 499
ClaI ATCGAT 1 cut(s) 66
Csp6I GTAC 5 cut(s) 203, 639, 719, 974, 1438
CviAII CATG 9 cut(s) 15, 170, 234, 309, 349, 395, 736, 955, 1090
CviQI GTAC 5 cut(s) 203, 639, 719, 974, 1438
DdeI CTNAG 2 cut(s) 495, 608
DinI GGCGCC 1 cut(s) 1225
DpnI GATC 3 cut(s) 130, 891, 1238
DpnII GATC 3 cut(s) 128, 889, 1236
EaeI YGGCCR 1 cut(s) 1332
Eam1104I CTCTTC 2 cut(s) 480, 867
EarI CTCTTC 2 cut(s) 480, 867
Ecl136II GAGCTC 2 cut(s) 820, 1076
Eco105I TACGTA 1 cut(s) 602
Eco130I CCWWGG 3 cut(s) 394, 735, 1335
Eco24I GRGCYC 2 cut(s) 822, 1078
Eco53kI GAGCTC 2 cut(s) 820, 1076
EcoICRI GAGCTC 2 cut(s) 820, 1076
EcoO109I RGGNCCY 1 cut(s) 499
EcoT14I CCWWGG 3 cut(s) 394, 735, 1335
EcoT38I GRGCYC 2 cut(s) 822, 1078
EgeI GGCGCC 1 cut(s) 1225
EheI GGCGCC 1 cut(s) 1225
ErhI CCWWGG 3 cut(s) 394, 735, 1335
Esp3I CGTCTC 1 cut(s) 1285
FaeI CATG 9 cut(s) 18, 173, 237, 312, 352, 398, 739, 958, 1093
FatI CATG 9 cut(s) 14, 169, 233, 308, 348, 394, 735, 954, 1089
FblI GTMKAC 3 cut(s) 598, 923, 937
Fnu4HI GCNGC 4 cut(s) 192, 264, 450, 666
FokI GGATG 3 cut(s) 817, 1003, 1007
FriOI GRGCYC 2 cut(s) 822, 1078
Fsp4HI GCNGC 4 cut(s) 192, 264, 450, 666
FspBI CTAG 4 cut(s) 305, 365, 1422, 1441
GlaI GCGC 2 cut(s) 314, 1225
GluI GCNGC 4 cut(s) 192, 264, 450, 666
GsaI CCCAGC 1 cut(s) 300
HaeII RGCGCY 2 cut(s) 316, 1227
HaeIII GGCC 4 cut(s) 393, 500, 1269, 1334
HhaI GCGC 2 cut(s) 315, 1226
Hin1I GRCGYC 1 cut(s) 1224
Hin1II CATG 9 cut(s) 18, 173, 237, 312, 352, 398, 739, 958, 1093
Hin6I GCGC 2 cut(s) 313, 1224
HinP1I GCGC 2 cut(s) 313, 1224
HindIII AAGCTT 1 cut(s) 980
HinfI GANTC 5 cut(s) 227, 527, 898, 1304, 1429
HphI GGTGA 1 cut(s) 1223
Hpy166II GTNNAC 4 cut(s) 205, 599, 924, 938
Hpy188I TCNGA 2 cut(s) 223, 918
Hpy188III TCNNGA 2 cut(s) 629, 893
Hpy8I GTNNAC 4 cut(s) 205, 599, 924, 938
HpyAV CCTTC 4 cut(s) 247, 1100, 1252, 1310
HpyCH4III ACNGT 1 cut(s) 1136
HpyCH4IV ACGT 1 cut(s) 601
HpyCH4V TGCA 8 cut(s) 14, 26, 89, 437, 665, 986, 1148, 1411
HpyF10VI GCNNNNNNNGC 5 cut(s) 188, 310, 319, 358, 1283
HpyF3I CTNAG 2 cut(s) 495, 608
HpySE526I ACGT 1 cut(s) 601
Hsp92I GRCGYC 1 cut(s) 1224
Hsp92II CATG 9 cut(s) 18, 173, 237, 312, 352, 398, 739, 958, 1093
HspAI GCGC 2 cut(s) 313, 1224
KasI GGCGCC 1 cut(s) 1223
Kzo9I GATC 3 cut(s) 128, 889, 1236
LmnI GCTCC 5 cut(s) 320, 406, 825, 1073, 1081
LpnPI CCDG 9 cut(s) 72, 282, 340, 534, 837, 854, 1283, 1357, 1415
Lsp1109I GCAGC 3 cut(s) 178, 275, 677
MaeI CTAG 4 cut(s) 305, 365, 1422, 1441
MaeII ACGT 1 cut(s) 601
MaeIII GTNAC 3 cut(s) 142, 422, 1019
MalI GATC 3 cut(s) 130, 891, 1238
MboI GATC 3 cut(s) 128, 889, 1236
MfeI CAATTG 1 cut(s) 776
MhlI GDGCHC 3 cut(s) 822, 1055, 1078
Mly113I GGCGCC 1 cut(s) 1224
MlyI GAGTC 1 cut(s) 1313
MnlI CCTC 7 cut(s) 99, 383, 542, 748, 959, 1042, 1051
MroXI GAANNNNTTC 1 cut(s) 902
MseI TTAA 2 cut(s) 186, 459
MspA1I CMGCKG 1 cut(s) 266
MunI CAATTG 1 cut(s) 776
Mva1269I GAATGC 2 cut(s) 452, 496
MwoI GCNNNNNNNGC 5 cut(s) 188, 310, 319, 358, 1283
NarI GGCGCC 1 cut(s) 1224
NcoI CCATGG 2 cut(s) 394, 735
NdeII GATC 3 cut(s) 128, 889, 1236
NheI GCTAGC 1 cut(s) 304
NlaIII CATG 9 cut(s) 18, 173, 237, 312, 352, 398, 739, 958, 1093
NlaIV GGNNCC 3 cut(s) 501, 1054, 1225
NmeAIII GCCGAG 1 cut(s) 930
NmuCI GTSAC 3 cut(s) 142, 422, 1019
NspI RCATGY 2 cut(s) 18, 1093
NspV TTCGAA 1 cut(s) 251
PaeI GCATGC 1 cut(s) 1093
PcsI WCGNNNNNNNCGW 1 cut(s) 1053
PctI GAATGC 2 cut(s) 452, 496
PdmI GAANNNNTTC 1 cut(s) 902
PfeI GAWTC 4 cut(s) 227, 527, 898, 1429
PkrI GCNGC 4 cut(s) 193, 265, 451, 667
Ple19I CGATCG 1 cut(s) 131
PleI GAGTC 1 cut(s) 1312
PluTI GGCGCC 1 cut(s) 1227
PpsI GAGTC 1 cut(s) 1312
Ppu21I YACGTR 1 cut(s) 602
Psp124BI GAGCTC 2 cut(s) 822, 1078
PspFI CCCAGC 1 cut(s) 296
PspN4I GGNNCC 3 cut(s) 501, 1054, 1225
PspPI GGNCC 1 cut(s) 499
PsrI GAACNNNNNNTAC 2 cut(s) 1165, 1197
PstNI CAGNNNCTG 1 cut(s) 266
PvuI CGATCG 1 cut(s) 131
PvuII CAGCTG 1 cut(s) 266
RgaI GCGATCGC 1 cut(s) 131
RsaI GTAC 5 cut(s) 204, 640, 720, 975, 1439
RsaNI GTAC 5 cut(s) 203, 639, 719, 974, 1438
SacI GAGCTC 2 cut(s) 822, 1078
SaqAI TTAA 2 cut(s) 186, 459
SatI GCNGC 4 cut(s) 192, 264, 450, 666
Sau3AI GATC 3 cut(s) 128, 889, 1236
Sau96I GGNCC 1 cut(s) 499
ScaI AGTACT 1 cut(s) 1439
SchI GAGTC 1 cut(s) 1313
SduI GDGCHC 3 cut(s) 822, 1055, 1078
SfaAI GCGATCGC 1 cut(s) 131
SfcI CTRYAG 3 cut(s) 111, 938, 1123
SfoI GGCGCC 1 cut(s) 1225
SfuI TTCGAA 1 cut(s) 251
SgfI GCGATCGC 1 cut(s) 131
SmlI CTYRAG 1 cut(s) 893
SmoI CTYRAG 1 cut(s) 893
SnaBI TACGTA 1 cut(s) 602
SphI GCATGC 1 cut(s) 1093
SsiI CCGC 1 cut(s) 450
SspDI GGCGCC 1 cut(s) 1223
SspI AATATT 1 cut(s) 519
SspMI CTAG 4 cut(s) 305, 365, 1422, 1441
SstI GAGCTC 2 cut(s) 822, 1078
StyI CCWWGG 3 cut(s) 394, 735, 1335
TaaI ACNGT 1 cut(s) 1136
TaiI ACGT 1 cut(s) 604
TaqI TCGA 5 cut(s) 66, 251, 630, 1239, 1307
TatI WGTACW 3 cut(s) 202, 718, 1437
TauI GCSGC 1 cut(s) 452
TfiI GAWTC 4 cut(s) 227, 527, 898, 1429
Tru1I TTAA 2 cut(s) 186, 459
Tru9I TTAA 2 cut(s) 186, 459
TscAI CASTG 4 cut(s) 142, 553, 1141, 1197
TseFI GTSAC 3 cut(s) 142, 422, 1019
TseI GCWGC 3 cut(s) 191, 263, 665
Tsp45I GTSAC 3 cut(s) 142, 422, 1019
TspDTI ATGAA 6 cut(s) 84, 240, 848, 863, 971, 1011
TspRI CASTG 4 cut(s) 142, 553, 1141, 1197
XapI RAATTY 3 cut(s) 245, 559, 1214
XceI RCATGY 2 cut(s) 18, 1093
XmiI GTMKAC 3 cut(s) 598, 923, 937
XmnI GAANNNNTTC 1 cut(s) 902
XspI CTAG 4 cut(s) 305, 365, 1422, 1441
ZrmI AGTACT 1 cut(s) 1439
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.