Cyclic nucleotide-gated ion channel 1-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 463 |
| AatII | GACGTC | 1 cut(s) | 760 |
| AccI | GTMKAC | 1 cut(s) | 132 |
| AccII | CGCG | 1 cut(s) | 464 |
| AciI | CCGC | 1 cut(s) | 761 |
| AcoI | YGGCCR | 2 cut(s) | 504, 639 |
| AcuI | CTGAAG | 1 cut(s) | 717 |
| AcyI | GRCGYC | 1 cut(s) | 757 |
| AfaI | GTAC | 2 cut(s) | 193, 434 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 745 |
| AflII | CTTAAG | 1 cut(s) | 356 |
| AflIII | ACRYGT | 2 cut(s) | 462, 598 |
| AluBI | AGCT | 4 cut(s) | 296, 344, 514, 547 |
| AluI | AGCT | 4 cut(s) | 296, 344, 514, 547 |
| Alw21I | GWGCWC | 1 cut(s) | 636 |
| Alw26I | GTCTC | 3 cut(s) | 310, 592, 667 |
| AoxI | GGCC | 2 cut(s) | 504, 639 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 570, 602 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 546 |
| AspLEI | GCGC | 1 cut(s) | 751 |
| AspS9I | GGNCC | 1 cut(s) | 456 |
| AsuHPI | GGTGA | 3 cut(s) | 539, 565, 724 |
| AvaII | GGWCC | 1 cut(s) | 456 |
| AxyI | CCTNAGG | 1 cut(s) | 518 |
| BalI | TGGCCA | 1 cut(s) | 506 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 116, 148 |
| Bbv12I | GWGCWC | 1 cut(s) | 636 |
| BccI | CCATC | 3 cut(s) | 38, 283, 515 |
| BciVI | GTATCC | 1 cut(s) | 28 |
| BcoDI | GTCTC | 3 cut(s) | 310, 592, 667 |
| BfmI | CTRYAG | 1 cut(s) | 657 |
| BfrI | CTTAAG | 1 cut(s) | 356 |
| BfuI | GTATCC | 1 cut(s) | 28 |
| Bme18I | GGWCC | 1 cut(s) | 456 |
| BmgT120I | GGNCC | 1 cut(s) | 456 |
| BmsI | GCATC | 1 cut(s) | 569 |
| BpmI | CTGGAG | 2 cut(s) | 24, 574 |
| BsaAI | YACGTR | 1 cut(s) | 195 |
| BsaHI | GRCGYC | 1 cut(s) | 757 |
| BsaJI | CCNNGG | 3 cut(s) | 642, 744, 771 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 745 |
| Bse1I | ACTGG | 2 cut(s) | 507, 584 |
| Bse21I | CCTNAGG | 1 cut(s) | 518 |
| BseDI | CCNNGG | 3 cut(s) | 642, 744, 771 |
| BseGI | GGATG | 1 cut(s) | 391 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 745 |
| BseMII | CTCAG | 2 cut(s) | 532, 685 |
| BseNI | ACTGG | 2 cut(s) | 507, 584 |
| BseRI | GAGGAG | 1 cut(s) | 506 |
| BseYI | CCCAGC | 1 cut(s) | 482 |
| Bsh1236I | CGCG | 1 cut(s) | 464 |
| BshFI | GGCC | 2 cut(s) | 506, 641 |
| BsiHKAI | GWGCWC | 1 cut(s) | 636 |
| BslFI | GGGAC | 1 cut(s) | 187 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 745 |
| BsmAI | GTCTC | 3 cut(s) | 310, 592, 667 |
| BsmBI | CGTCTC | 1 cut(s) | 310 |
| BsmFI | GGGAC | 1 cut(s) | 187 |
| BsnI | GGCC | 2 cut(s) | 506, 641 |
| Bsp1286I | GDGCHC | 1 cut(s) | 636 |
| Bsp143I | GATC | 1 cut(s) | 106 |
| BspACI | CCGC | 1 cut(s) | 761 |
| BspANI | GGCC | 2 cut(s) | 506, 641 |
| BspCNI | CTCAG | 2 cut(s) | 531, 684 |
| BspFNI | CGCG | 1 cut(s) | 464 |
| BspQI | GCTCTTC | 1 cut(s) | 537 |
| BspTI | CTTAAG | 1 cut(s) | 356 |
| BsrI | ACTGG | 2 cut(s) | 507, 584 |
| BssECI | CCNNGG | 3 cut(s) | 642, 744, 771 |
| BssMI | GATC | 1 cut(s) | 106 |
| BssNAI | GTATAC | 1 cut(s) | 133 |
| BssNI | GRCGYC | 1 cut(s) | 757 |
| BssT1I | CCWWGG | 2 cut(s) | 744, 771 |
| Bst1107I | GTATAC | 1 cut(s) | 133 |
| Bst4CI | ACNGT | 4 cut(s) | 249, 307, 569, 658 |
| Bst6I | CTCTTC | 2 cut(s) | 537, 693 |
| BstACI | GRCGYC | 1 cut(s) | 757 |
| BstAFI | CTTAAG | 1 cut(s) | 356 |
| BstBAI | YACGTR | 1 cut(s) | 195 |
| BstC8I | GCNNGC | 3 cut(s) | 152, 242, 426 |
| BstDEI | CTNAG | 3 cut(s) | 161, 518, 671 |
| BstF5I | GGATG | 1 cut(s) | 391 |
| BstFNI | CGCG | 1 cut(s) | 464 |
| BstHHI | GCGC | 1 cut(s) | 751 |
| BstKTI | GATC | 1 cut(s) | 109 |
| BstMAI | GTCTC | 3 cut(s) | 310, 592, 667 |
| BstMBI | GATC | 1 cut(s) | 106 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 350 |
| BstNSI | RCATGY | 1 cut(s) | 602 |
| BstSFI | CTRYAG | 1 cut(s) | 657 |
| BstSNI | TACGTA | 1 cut(s) | 195 |
| BstUI | CGCG | 1 cut(s) | 464 |
| BstZ17I | GTATAC | 1 cut(s) | 133 |
| Bsu36I | CCTNAGG | 1 cut(s) | 518 |
| BsuI | GTATCC | 1 cut(s) | 28 |
| BsuRI | GGCC | 2 cut(s) | 506, 641 |
| BtsCI | GGATG | 1 cut(s) | 391 |
| BtsIMutI | CAGTG | 2 cut(s) | 312, 500 |
| Cac8I | GCNNGC | 3 cut(s) | 152, 242, 426 |
| CfoI | GCGC | 1 cut(s) | 751 |
| Cfr13I | GGNCC | 1 cut(s) | 456 |
| CseI | GACGC | 1 cut(s) | 453 |
| Csp6I | GTAC | 2 cut(s) | 192, 433 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 288, 323 |
| CviAII | CATG | 5 cut(s) | 313, 382, 479, 599, 637 |
| CviQI | GTAC | 2 cut(s) | 192, 433 |
| DdeI | CTNAG | 3 cut(s) | 161, 518, 671 |
| DpnI | GATC | 1 cut(s) | 108 |
| DpnII | GATC | 1 cut(s) | 106 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 463 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 463 |
| EaeI | YGGCCR | 2 cut(s) | 504, 639 |
| Eam1104I | CTCTTC | 2 cut(s) | 537, 693 |
| EarI | CTCTTC | 2 cut(s) | 537, 693 |
| EciI | GGCGGA | 1 cut(s) | 750 |
| Eco105I | TACGTA | 1 cut(s) | 195 |
| Eco130I | CCWWGG | 2 cut(s) | 744, 771 |
| Eco47I | GGWCC | 1 cut(s) | 456 |
| Eco57I | CTGAAG | 1 cut(s) | 717 |
| Eco81I | CCTNAGG | 1 cut(s) | 518 |
| EcoT14I | CCWWGG | 2 cut(s) | 744, 771 |
| ErhI | CCWWGG | 2 cut(s) | 744, 771 |
| Esp3I | CGTCTC | 1 cut(s) | 310 |
| FaeI | CATG | 5 cut(s) | 316, 385, 482, 602, 640 |
| FaqI | GGGAC | 1 cut(s) | 187 |
| FatI | CATG | 5 cut(s) | 312, 381, 478, 598, 636 |
| FblI | GTMKAC | 1 cut(s) | 132 |
| FokI | GGATG | 1 cut(s) | 398 |
| GlaI | GCGC | 1 cut(s) | 750 |
| GsaI | CCCAGC | 1 cut(s) | 486 |
| GsuI | CTGGAG | 2 cut(s) | 24, 574 |
| HaeIII | GGCC | 2 cut(s) | 506, 641 |
| HgaI | GACGC | 1 cut(s) | 453 |
| HhaI | GCGC | 1 cut(s) | 751 |
| Hin1I | GRCGYC | 1 cut(s) | 757 |
| Hin1II | CATG | 5 cut(s) | 316, 385, 482, 602, 640 |
| Hin6I | GCGC | 1 cut(s) | 749 |
| HinP1I | GCGC | 1 cut(s) | 749 |
| HinfI | GANTC | 3 cut(s) | 83, 220, 492 |
| HphI | GGTGA | 3 cut(s) | 539, 565, 724 |
| Hpy166II | GTNNAC | 3 cut(s) | 133, 310, 456 |
| Hpy188I | TCNGA | 3 cut(s) | 119, 612, 674 |
| Hpy188III | TCNNGA | 4 cut(s) | 41, 80, 110, 695 |
| Hpy8I | GTNNAC | 3 cut(s) | 133, 310, 456 |
| Hpy99I | CGWCG | 2 cut(s) | 433, 759 |
| HpyAV | CCTTC | 2 cut(s) | 518, 703 |
| HpyCH4III | ACNGT | 4 cut(s) | 249, 307, 569, 658 |
| HpyCH4IV | ACGT | 4 cut(s) | 194, 270, 431, 757 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 350 |
| HpyF3I | CTNAG | 3 cut(s) | 161, 518, 671 |
| HpySE526I | ACGT | 4 cut(s) | 194, 270, 431, 757 |
| Hsp92I | GRCGYC | 1 cut(s) | 757 |
| Hsp92II | CATG | 5 cut(s) | 316, 385, 482, 602, 640 |
| HspAI | GCGC | 1 cut(s) | 749 |
| Kzo9I | GATC | 1 cut(s) | 106 |
| LguI | GCTCTTC | 1 cut(s) | 537 |
| LmnI | GCTCC | 2 cut(s) | 293, 519 |
| LweI | GCATC | 1 cut(s) | 569 |
| MaeII | ACGT | 4 cut(s) | 194, 270, 431, 757 |
| MaeIII | GTNAC | 4 cut(s) | 184, 527, 686, 712 |
| MalI | GATC | 1 cut(s) | 108 |
| MboI | GATC | 1 cut(s) | 106 |
| MboII | GAAGA | 5 cut(s) | 412, 415, 554, 710, 722 |
| MfeI | CAATTG | 1 cut(s) | 553 |
| MhlI | GDGCHC | 1 cut(s) | 636 |
| MlsI | TGGCCA | 1 cut(s) | 506 |
| MluCI | AATT | 2 cut(s) | 166, 553 |
| MluI | ACGCGT | 1 cut(s) | 462 |
| MluNI | TGGCCA | 1 cut(s) | 506 |
| MmeI | TCCRAC | 3 cut(s) | 12, 183, 590 |
| MnlI | CCTC | 5 cut(s) | 268, 527, 637, 694, 774 |
| Mox20I | TGGCCA | 1 cut(s) | 506 |
| MroXI | GAANNNNTTC | 1 cut(s) | 546 |
| MscI | TGGCCA | 1 cut(s) | 506 |
| MseI | TTAA | 5 cut(s) | 63, 90, 357, 375, 778 |
| Msp20I | TGGCCA | 1 cut(s) | 506 |
| MspCI | CTTAAG | 1 cut(s) | 356 |
| MunI | CAATTG | 1 cut(s) | 553 |
| MvnI | CGCG | 1 cut(s) | 464 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 350 |
| NdeII | GATC | 1 cut(s) | 106 |
| NlaIII | CATG | 5 cut(s) | 316, 385, 482, 602, 640 |
| NmeAIII | GCCGAG | 1 cut(s) | 667 |
| NmuCI | GTSAC | 3 cut(s) | 184, 527, 712 |
| NspI | RCATGY | 1 cut(s) | 602 |
| PciI | ACATGT | 1 cut(s) | 598 |
| PciSI | GCTCTTC | 1 cut(s) | 537 |
| PdmI | GAANNNNTTC | 1 cut(s) | 546 |
| PfeI | GAWTC | 3 cut(s) | 83, 220, 492 |
| Ppu21I | YACGTR | 1 cut(s) | 195 |
| PscI | ACATGT | 1 cut(s) | 598 |
| PspFI | CCCAGC | 1 cut(s) | 482 |
| PspPI | GGNCC | 1 cut(s) | 456 |
| RsaI | GTAC | 2 cut(s) | 193, 434 |
| RsaNI | GTAC | 2 cut(s) | 192, 433 |
| SapI | GCTCTTC | 1 cut(s) | 537 |
| SaqAI | TTAA | 5 cut(s) | 63, 90, 357, 375, 778 |
| Sau3AI | GATC | 1 cut(s) | 106 |
| Sau96I | GGNCC | 1 cut(s) | 456 |
| SduI | GDGCHC | 1 cut(s) | 636 |
| SfaNI | GCATC | 1 cut(s) | 569 |
| SfcI | CTRYAG | 1 cut(s) | 657 |
| SinI | GGWCC | 1 cut(s) | 456 |
| SmlI | CTYRAG | 1 cut(s) | 356 |
| SmoI | CTYRAG | 1 cut(s) | 356 |
| SnaBI | TACGTA | 1 cut(s) | 195 |
| Sse9I | AATT | 2 cut(s) | 166, 553 |
| SsiI | CCGC | 1 cut(s) | 761 |
| SspI | AATATT | 1 cut(s) | 75 |
| StyI | CCWWGG | 2 cut(s) | 744, 771 |
| TaaI | ACNGT | 4 cut(s) | 249, 307, 569, 658 |
| TaiI | ACGT | 4 cut(s) | 197, 273, 434, 760 |
| TaqI | TCGA | 1 cut(s) | 81 |
| TaqII | GACCGA | 1 cut(s) | 20 |
| TasI | AATT | 2 cut(s) | 166, 553 |
| TfiI | GAWTC | 3 cut(s) | 83, 220, 492 |
| Tru1I | TTAA | 5 cut(s) | 63, 90, 357, 375, 778 |
| Tru9I | TTAA | 5 cut(s) | 63, 90, 357, 375, 778 |
| TscAI | CASTG | 2 cut(s) | 312, 507 |
| TseFI | GTSAC | 3 cut(s) | 184, 527, 712 |
| Tsp45I | GTSAC | 3 cut(s) | 184, 527, 712 |
| TspDTI | ATGAA | 3 cut(s) | 42, 111, 402 |
| TspGWI | ACGGA | 1 cut(s) | 756 |
| TspRI | CASTG | 2 cut(s) | 312, 507 |
| Vha464I | CTTAAG | 1 cut(s) | 356 |
| VpaK11BI | GGWCC | 1 cut(s) | 456 |
| XceI | RCATGY | 1 cut(s) | 602 |
| XmiI | GTMKAC | 1 cut(s) | 132 |
| XmnI | GAANNNNTTC | 1 cut(s) | 546 |
| ZraI | GACGTC | 1 cut(s) | 758 |