MD15G1431600.v1.1

Cyclic nucleotide-gated ion channel 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
OG0000119
Physical Location & Seq
Forward (+)
53138136 .. 53140262
2127 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1431600.v1.1.491

Sequence Viewer

Length: 1155 bp
ATGTGTGATGCTGCTGTGTCACTGGACCCTTTGTTCTTTTACATTCCATTCATCAATGAAAAAAACAAGTGCCTTGGAATGGACAAGAAGCTGAAGAATGTAACTCTTGTTTTGCGACTGCTCACAGATCTCATTTTCGTAGTGCATATTATTCATCAAATTCGTCAGGCCATTAAATCTGTCAACTCACGTGGAATGGAAAATCCCAGTTGGGAATCGAAAGCTGTGGCAGTAGCCAGGAAGTTGTCGTGGCGCTCGATCGTTACTGACATTCTTGCTGTTCTTCCCATCCCACAAGTGCTTTTAGTACATGTTTTCTTCAAAATGACAGGCTATCGATATTTGTACAAAAGAAAGGTTCTAACTTTTTTCCTTCTTGCCCAATATCTTCCGAGGATTTATCGATTTCTCCTATCCTCTAACAACCTTCCACAAACTGGAATATGGACCAAAGGTGTATTCTATTTTGTCCTTTACATCCTTGCAAGTCATACGAGACATCATGTTTGGTATCGGACATTTAGAAAACATAACATGACAGACTTGAGTACTTTTTACTGTGACGACAGTGCTACCCCAAGAAATATTACATCATTTCTAGATAAATTTTGTCCAATAAATGTTCCTGAAAATACTACACGGCCGTTTGATTTCGGAATATTTCTTGATTCTCTTCGATCTGGAAACGCGGCGTCGTTGGATTTCCCGGGCAAGTTGTTCTACTCGTTTTGGTGGGGACTGCGAAATTTAAGCAACTTTGGCACAAATCTGACAACAAGTACATATGTGTGGGAAAACATCTTTGCAATTCTTATTTCTATCATTGGATTACTCCTATTTTTATATCTCATAGGAAATGTACAGACGTTTATGCAATTGGCAACTACAAGGTCGGAGGATATAAGACAGAAGATTAAGATGAAAGAGCGACAAATAGAAGAGTGGATGGTGAAAAATGATCTCCCAGAAGATTTGAAAAAAGAGATCAAGAAAAACGTAAAACAAAAACTGAAAGAAAACAAAGATGCTGATCTGGAGAATCTGTTCTCCATTCTTCCTTGGTACACCAAGAAAACCCTAAAGCGTTTTCTCTTCATGAATACCCTAAGGACAGTATGTGCAACCTCAACACCTCTTATATCTTTATATGATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
Ion_trans

Protein Analysis

385

Amino Acids

45.0

Weight (kDa)

9.69

Isoelectric Point (pI)

38.65

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000119)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g10570 FvH4_4g36390 FvH4_7g31840 FvH4_7g31840 FvH4_7g31850 FvH4_7g31850 FvH4_7g31861 FvH4_7g31861 FvH4_7g31950
malus_domestica MD01G1054600.v1.1 MD01G1221100.v1.1 MD01G1221400.v1.1 MD01G1221600.v1.1 MD01G1221800.v1.1 MD01G1222000.v1.1 MD01G1222100.v1.1 MD07G1140800.v1.1 MD07G1291200.v1.1 MD07G1291400.v1.1 MD07G1291500.v1.1 MD07G1291700.v1.1 MD07G1292500.v1.1 MD07G1292700.v1.1 MD07G1292800.v1.1 MD07G1292900.v1.1 MD08G1241600.v1.1 MD11G1083800.v1.1 MD15G1431600.v1.1
prunus_persica Prupe.1G017800_v2.0.a1 Prupe.1G017800_v2.0.a1 Prupe.1G162800_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312700_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G143000_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1
pyrus_communis pycom01g23050 pycom01g23070 pycom01g23090 pycom01g23100 pycom01g23110 pycom01g23120 pycom01g23170 pycom07g26410 pycom07g26440 pycom07g26470 pycom07g26480 pycom07g26490 pycom07g26500 pycom07g26510 pycom07g26530 pycom07g26540 pycom07g26570 pycom07g26580 pycom07g26590 pycom08g20940
rosa_chinensis RchiOBHm_Chr1g0324571 RchiOBHm_Chr1g0336181 RchiOBHm_Chr1g0381061 RchiOBHm_Chr1g0381091 RchiOBHm_Chr1g0381121 RchiOBHm_Chr1g0381131 RchiOBHm_Chr1g0381141 RchiOBHm_Chr1g0381161 RchiOBHm_Chr1g0381211 RchiOBHm_Chr2g0110361 RchiOBHm_Chr2g0120231 RchiOBHm_Chr3g0486281 RchiOBHm_Chr3g0486311 RchiOBHm_Chr3g0486401 RchiOBHm_Chr4g0409511 RchiOBHm_Chr4g0409521 RchiOBHm_Chr5g0017271 RchiOBHm_Chr5g0048781 RchiOBHm_Chr5g0048811
rosa_laevigata RLG00000002401 RLG00000008559 RLG00000017798 RLG00000017799 RLG00000023082 RLG00000023088 RLG00000026230 RLG00000026238 RLG00000026240 RLG00000026241 RLG00000026242 RLG00000026243 RLG00000026244 RLG00000026246 RLG00000026247 RLG00000026248 RLG00000029876 RLG00000030189 RLG00000034579
rosa_multiflora Rmu_co8101374.1_g000001 Rmu_co8309149.1_g000001 Rmu_co8450063.1_g000001 Rmu_sc0000441.1_g000094 Rmu_sc0000479.1_g000005 Rmu_sc0000647.1_g000006 Rmu_sc0001393.1_g000031 Rmu_sc0001423.1_g000037 Rmu_sc0001616.1_g000015 Rmu_sc0001857.1_g000011 Rmu_sc0002183.1_g000013 Rmu_sc0002183.1_g000028 Rmu_sc0002183.1_g000030 Rmu_sc0002688.1_g000003 Rmu_sc0002688.1_g000020 Rmu_sc0003801.1_g000003 Rmu_sc0003801.1_g000004 Rmu_sc0004125.1_g000006 Rmu_sc0004494.1_g000005 Rmu_sc0004494.1_g000006 Rmu_sc0004494.1_g000008 Rmu_sc0004494.1_g000009 Rmu_sc0005842.1_g000004 Rmu_sc0006872.1_g000001 Rmu_sc0006872.1_g000005 Rmu_sc0006872.1_g000009 Rmu_sc0006872.1_g000010 Rmu_sc0008053.1_g000026
rosa_roxburghii Rroxscaffold_159G00432960 Rroxscaffold_1G00033060 Rroxscaffold_2G00123150 Rroxscaffold_2G00123170 Rroxscaffold_2G00133500 Rroxscaffold_2G00133550 Rroxscaffold_4G00278650 Rroxscaffold_4G00278750 Rroxscaffold_4G00278790 Rroxscaffold_4G00278800 Rroxscaffold_4G00278810 Rroxscaffold_4G00325390 Rroxscaffold_5G00354010 Rroxscaffold_6G00395890 Rroxscaffold_6G00395900 Rroxscaffold_6G00395920
rosa_rugosa Rorug01G0046900.1 Rorug01G0427000 Rorug01G0427100 Rorug01G0427200 Rorug01G0427300 Rorug01G0427400 Rorug01G0427500 Rorug01G0427500 Rorug01G0427600 Rorug01G0427600 Rorug01G0427700 Rorug01G0427700 Rorug01G0427800 Rorug01G0428700 Rorug02G0166400 Rorug02G0166500 Rorug02G0166500 Rorug02G0166600 Rorug02G0166600 Rorug02G0166700 Rorug02G0167300 Rorug02G0167300 Rorug02G0167300 Rorug03G0224600 Rorug03G0224600 Rorug04G0094400 Rorug05G0241100 Rorug05G0241200
rosa_samantha Rh1BG407700 Rh1BG407900 Rh1BG409000 Rh1CG064700 Rh1CG420900 Rh1CG421000 Rh1CG421200 Rh1CG421300 Rh1CG421800 Rh1CG421900 Rh1CG422000 Rh1CG422200 Rh1CG422300 Rh1CG423600 Rh1DG437600 Rh1DG438900 Rh1DG439000 Rh1DG440300 Rh2AG219100 Rh2CG220700 Rh2DG225300 Rh3AG274400 Rh3AG274600 Rh3CG308900 Rh3DG305800 Rh4AG156400 Rh5AG129000 Rh5AG320900 Rh5CG139600
rosa_wichuraiana Rw1G005300 Rw1G039280 Rw1G039300 Rw1G039310 Rw1G039320 Rw1G039330 Rw1G039340 Rw1G039360 Rw1G039390 Rw2G016910 Rw2G022800 Rw3G024330 Rw3G024340 Rw3G024350 Rw3G024400 Rw4G012810 Rw5G030120 Rw5G030280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 437
AccII CGCG 1 cut(s) 689
AciI CCGC 1 cut(s) 689
AcoI YGGCCR 1 cut(s) 641
AcsI RAATTY 3 cut(s) 159, 605, 745
AcuI CTGAAG 1 cut(s) 113
AcvI CACGTG 1 cut(s) 191
AcyI GRCGYC 1 cut(s) 692
AfaI GTAC 6 cut(s) 309, 347, 550, 781, 861, 1064
AfiI CCNNNNNNNGG 2 cut(s) 79, 437
AflIII ACRYGT 1 cut(s) 310
AgsI TTSAA 2 cut(s) 322, 976
AjnI CCWGG 1 cut(s) 236
AjuI GAANNNNNNNTTGG 2 cut(s) 443, 475
AloI GAACNNNNNNTCC 4 cut(s) 17, 49, 1028, 1060
AluBI AGCT 2 cut(s) 91, 224
AluI AGCT 2 cut(s) 91, 224
Alw26I GTCTC 1 cut(s) 490
Ama87I CYCGRG 1 cut(s) 706
AoxI GGCC 2 cut(s) 168, 641
ApeKI GCWGC 1 cut(s) 11
ApoI RAATTY 3 cut(s) 159, 605, 745
ArsI GACNNNNNNTTYG 2 cut(s) 489, 521
Asp700I GAANNNNTTC 1 cut(s) 1043
AspLEI GCGC 1 cut(s) 255
AspS9I GGNCC 2 cut(s) 25, 447
AsuC2I CCSGG 2 cut(s) 707, 708
AsuHPI GGTGA 1 cut(s) 961
AvaI CYCGRG 1 cut(s) 706
AvaII GGWCC 2 cut(s) 25, 447
AxyI CCTNAGG 1 cut(s) 1106
BbrPI CACGTG 1 cut(s) 191
BccI CCATC 2 cut(s) 296, 940
BceAI ACGGC 2 cut(s) 628, 656
BciT130I CCWGG 1 cut(s) 238
BcnI CCSGG 2 cut(s) 707, 708
BcoDI GTCTC 1 cut(s) 490
BfaI CTAG 1 cut(s) 599
BfoI RGCGCY 1 cut(s) 256
BglII AGATCT 1 cut(s) 127
BisI GCNGC 2 cut(s) 12, 690
BlsI GCNGC 2 cut(s) 13, 691
BmcAI AGTACT 1 cut(s) 550
Bme1390I CCNGG 3 cut(s) 238, 707, 708
Bme18I GGWCC 2 cut(s) 25, 447
BmeT110I CYCGRG 1 cut(s) 706
BmgT120I GGNCC 2 cut(s) 25, 447
BmiI GGNNCC 1 cut(s) 27
BmrFI CCNGG 3 cut(s) 238, 707, 708
BmrI ACTGGG 1 cut(s) 201
BmsI GCATC 1 cut(s) 1015
BmuI ACTGGG 1 cut(s) 201
BpmI CTGGAG 1 cut(s) 1055
BpuEI CTTGAG 1 cut(s) 565
BpuMI CCSGG 2 cut(s) 707, 708
Bsa29I ATCGAT 2 cut(s) 337, 403
BsaAI YACGTR 1 cut(s) 191
BsaBI GATNNNNATC 1 cut(s) 1029
BsaHI GRCGYC 1 cut(s) 692
BsaJI CCNNGG 4 cut(s) 73, 392, 706, 1058
BsaXI ACNNNNNCTCC 2 cut(s) 1028, 1058
Bsc4I CCNNNNNNNGG 2 cut(s) 79, 437
Bse1I ACTGG 3 cut(s) 27, 207, 442
Bse21I CCTNAGG 1 cut(s) 1106
Bse8I GATNNNNATC 1 cut(s) 1029
BseBI CCWGG 1 cut(s) 238
BseCI ATCGAT 2 cut(s) 337, 403
BseDI CCNNGG 4 cut(s) 73, 392, 706, 1058
BseGI GGATG 3 cut(s) 288, 477, 951
BseJI GATNNNNATC 1 cut(s) 1029
BseLI CCNNNNNNNGG 2 cut(s) 79, 437
BseNI ACTGG 3 cut(s) 27, 207, 442
BseX3I CGGCCG 1 cut(s) 641
Bsh1236I CGCG 1 cut(s) 689
Bsh1285I CGRYCG 2 cut(s) 261, 644
BshFI GGCC 2 cut(s) 170, 643
BshVI ATCGAT 2 cut(s) 337, 403
BsiEI CGRYCG 2 cut(s) 261, 644
BsiHKCI CYCGRG 1 cut(s) 706
BsiSI CCGG 1 cut(s) 707
BslFI GGGAC 1 cut(s) 750
BslI CCNNNNNNNGG 2 cut(s) 79, 437
BsmAI GTCTC 1 cut(s) 490
BsmFI GGGAC 1 cut(s) 750
BsnI GGCC 2 cut(s) 170, 643
BsoBI CYCGRG 1 cut(s) 706
Bsp1407I TGTACA 2 cut(s) 345, 859
Bsp143I GATC 6 cut(s) 127, 258, 677, 958, 984, 1030
BspACI CCGC 1 cut(s) 689
BspANI GGCC 2 cut(s) 170, 643
BspDI ATCGAT 2 cut(s) 337, 403
BspFNI CGCG 1 cut(s) 689
BspHI TCATGA 1 cut(s) 1095
BspLI GGNNCC 1 cut(s) 27
BsrGI TGTACA 2 cut(s) 345, 859
BsrI ACTGG 3 cut(s) 27, 207, 442
BssECI CCNNGG 4 cut(s) 73, 392, 706, 1058
BssMI GATC 6 cut(s) 127, 258, 677, 958, 984, 1030
BssNI GRCGYC 1 cut(s) 692
BssT1I CCWWGG 2 cut(s) 73, 1058
Bst2UI CCWGG 1 cut(s) 238
Bst4CI ACNGT 3 cut(s) 560, 569, 1114
Bst6I CTCTTC 3 cut(s) 678, 933, 1097
BstACI GRCGYC 1 cut(s) 692
BstAUI TGTACA 2 cut(s) 345, 859
BstBAI YACGTR 1 cut(s) 191
BstDEI CTNAG 1 cut(s) 1106
BstF5I GGATG 3 cut(s) 288, 477, 951
BstFNI CGCG 1 cut(s) 689
BstH2I RGCGCY 1 cut(s) 256
BstHHI GCGC 1 cut(s) 255
BstKTI GATC 6 cut(s) 130, 261, 680, 961, 987, 1033
BstMAI GTCTC 1 cut(s) 490
BstMBI GATC 6 cut(s) 127, 258, 677, 958, 984, 1030
BstMCI CGRYCG 2 cut(s) 261, 644
BstMWI GCNNNNNNNGC 1 cut(s) 759
BstNI CCWGG 1 cut(s) 238
BstNSI RCATGY 1 cut(s) 314
BstSCI CCNGG 3 cut(s) 236, 705, 706
BstUI CGCG 1 cut(s) 689
BstX2I RGATCY 1 cut(s) 127
BstYI RGATCY 1 cut(s) 127
BstZI CGGCCG 1 cut(s) 641
Bsu15I ATCGAT 2 cut(s) 337, 403
Bsu36I CCTNAGG 1 cut(s) 1106
BsuRI GGCC 2 cut(s) 170, 643
BsuTUI ATCGAT 2 cut(s) 337, 403
BtsCI GGATG 3 cut(s) 288, 477, 951
BtsIMutI CAGTG 2 cut(s) 20, 574
CciI TCATGA 1 cut(s) 1095
CfoI GCGC 1 cut(s) 255
Cfr13I GGNCC 2 cut(s) 25, 447
Cfr9I CCCGGG 1 cut(s) 706
ClaI ATCGAT 2 cut(s) 337, 403
CseI GACGC 1 cut(s) 681
Csp6I GTAC 6 cut(s) 308, 346, 549, 780, 860, 1063
CspCI CAANNNNNGTGG 2 cut(s) 172, 207
CviAII CATG 4 cut(s) 311, 503, 535, 1096
CviJI RGCY 6 cut(s) 91, 170, 224, 236, 333, 643
CviKI_1 RGCY 6 cut(s) 91, 170, 224, 236, 333, 643
CviQI GTAC 6 cut(s) 308, 346, 549, 780, 860, 1063
DdeI CTNAG 1 cut(s) 1106
DpnI GATC 6 cut(s) 129, 260, 679, 960, 986, 1032
DpnII GATC 6 cut(s) 127, 258, 677, 958, 984, 1030
EaeI YGGCCR 1 cut(s) 641
EagI CGGCCG 1 cut(s) 641
Eam1104I CTCTTC 3 cut(s) 678, 933, 1097
EarI CTCTTC 3 cut(s) 678, 933, 1097
EclXI CGGCCG 1 cut(s) 641
Eco130I CCWWGG 2 cut(s) 73, 1058
Eco47I GGWCC 2 cut(s) 25, 447
Eco52I CGGCCG 1 cut(s) 641
Eco57I CTGAAG 1 cut(s) 113
Eco72I CACGTG 1 cut(s) 191
Eco81I CCTNAGG 1 cut(s) 1106
Eco88I CYCGRG 1 cut(s) 706
EcoRII CCWGG 1 cut(s) 236
EcoT14I CCWWGG 2 cut(s) 73, 1058
ErhI CCWWGG 2 cut(s) 73, 1058
FaeI CATG 4 cut(s) 314, 506, 538, 1099
FaqI GGGAC 1 cut(s) 750
FatI CATG 4 cut(s) 310, 502, 534, 1095
FauNDI CATATG 1 cut(s) 784
Fnu4HI GCNGC 2 cut(s) 12, 690
FokI GGATG 3 cut(s) 275, 464, 958
Fsp4HI GCNGC 2 cut(s) 12, 690
FspBI CTAG 1 cut(s) 599
GlaI GCGC 1 cut(s) 254
GluI GCNGC 2 cut(s) 12, 690
GsuI CTGGAG 1 cut(s) 1055
HaeII RGCGCY 1 cut(s) 256
HaeIII GGCC 2 cut(s) 170, 643
HapII CCGG 1 cut(s) 707
HgaI GACGC 1 cut(s) 681
HhaI GCGC 1 cut(s) 255
Hin1I GRCGYC 1 cut(s) 692
Hin1II CATG 4 cut(s) 314, 506, 538, 1099
Hin6I GCGC 1 cut(s) 253
HinP1I GCGC 1 cut(s) 253
HincII GTYRAC 1 cut(s) 184
HindII GTYRAC 1 cut(s) 184
HinfI GANTC 3 cut(s) 215, 668, 1039
HpaII CCGG 1 cut(s) 707
HphI GGTGA 1 cut(s) 961
Hpy166II GTNNAC 2 cut(s) 184, 1065
Hpy188I TCNGA 5 cut(s) 393, 516, 656, 771, 895
Hpy188III TCNNGA 7 cut(s) 599, 626, 665, 681, 988, 1034, 1096
Hpy8I GTNNAC 2 cut(s) 184, 1065
Hpy99I CGWCG 1 cut(s) 697
HpyAV CCTTC 2 cut(s) 383, 437
HpyCH4III ACNGT 3 cut(s) 560, 569, 1114
HpyCH4IV ACGT 3 cut(s) 190, 866, 996
HpyCH4V TGCA 5 cut(s) 145, 485, 806, 874, 1121
HpyF10VI GCNNNNNNNGC 1 cut(s) 759
HpyF3I CTNAG 1 cut(s) 1106
HpySE526I ACGT 3 cut(s) 190, 866, 996
Hsp92I GRCGYC 1 cut(s) 692
Hsp92II CATG 4 cut(s) 314, 506, 538, 1099
HspAI GCGC 1 cut(s) 253
Kzo9I GATC 6 cut(s) 127, 258, 677, 958, 984, 1030
LweI GCATC 1 cut(s) 1015
MaeI CTAG 1 cut(s) 599
MaeII ACGT 3 cut(s) 190, 866, 996
MaeIII GTNAC 4 cut(s) 18, 100, 262, 560
MalI GATC 6 cut(s) 129, 260, 679, 960, 986, 1032
MboI GATC 6 cut(s) 127, 258, 677, 958, 984, 1030
MfeI CAATTG 1 cut(s) 875
MflI RGATCY 1 cut(s) 127
MluCI AATT 5 cut(s) 159, 605, 745, 807, 875
MmeI TCCRAC 2 cut(s) 678, 873
MnlI CCTC 5 cut(s) 387, 427, 889, 1135, 1143
MroXI GAANNNNTTC 1 cut(s) 1043
MseI TTAA 4 cut(s) 174, 749, 915, 1153
MslI CAYNNNNRTG 1 cut(s) 787
MspI CCGG 1 cut(s) 707
MspR9I CCNGG 3 cut(s) 238, 707, 708
MunI CAATTG 1 cut(s) 875
MvaI CCWGG 1 cut(s) 238
MvnI CGCG 1 cut(s) 689
MwoI GCNNNNNNNGC 1 cut(s) 759
NciI CCSGG 2 cut(s) 707, 708
NdeI CATATG 1 cut(s) 784
NdeII GATC 6 cut(s) 127, 258, 677, 958, 984, 1030
NlaIII CATG 4 cut(s) 314, 506, 538, 1099
NlaIV GGNNCC 1 cut(s) 27
NmuCI GTSAC 2 cut(s) 18, 560
NspI RCATGY 1 cut(s) 314
PagI TCATGA 1 cut(s) 1095
PciI ACATGT 1 cut(s) 310
PcsI WCGNNNNNNNCGW 1 cut(s) 254
PdmI GAANNNNTTC 1 cut(s) 1043
PfeI GAWTC 3 cut(s) 215, 668, 1039
PflMI CCANNNNNTGG 1 cut(s) 437
PkrI GCNGC 2 cut(s) 13, 691
Ple19I CGATCG 1 cut(s) 261
PmaCI CACGTG 1 cut(s) 191
PmlI CACGTG 1 cut(s) 191
Ppu21I YACGTR 1 cut(s) 191
PscI ACATGT 1 cut(s) 310
Psp6I CCWGG 1 cut(s) 236
PspCI CACGTG 1 cut(s) 191
PspGI CCWGG 1 cut(s) 236
PspN4I GGNNCC 1 cut(s) 27
PspPI GGNCC 2 cut(s) 25, 447
PsuI RGATCY 1 cut(s) 127
PvuI CGATCG 1 cut(s) 261
RsaI GTAC 6 cut(s) 309, 347, 550, 781, 861, 1064
RsaNI GTAC 6 cut(s) 308, 346, 549, 780, 860, 1063
RseI CAYNNNNRTG 1 cut(s) 787
SaqAI TTAA 4 cut(s) 174, 749, 915, 1153
SatI GCNGC 2 cut(s) 12, 690
Sau3AI GATC 6 cut(s) 127, 258, 677, 958, 984, 1030
Sau96I GGNCC 2 cut(s) 25, 447
ScaI AGTACT 1 cut(s) 550
ScrFI CCNGG 3 cut(s) 238, 707, 708
SfaNI GCATC 1 cut(s) 1015
SinI GGWCC 2 cut(s) 25, 447
SmaI CCCGGG 1 cut(s) 708
SmiMI CAYNNNNRTG 1 cut(s) 787
SmlI CTYRAG 1 cut(s) 544
SmoI CTYRAG 1 cut(s) 544
Sse9I AATT 5 cut(s) 159, 605, 745, 807, 875
SsiI CCGC 1 cut(s) 689
SspI AATATT 2 cut(s) 586, 660
SspMI CTAG 1 cut(s) 599
StyD4I CCNGG 3 cut(s) 236, 705, 706
StyI CCWWGG 2 cut(s) 73, 1058
TaaI ACNGT 3 cut(s) 560, 569, 1114
TaiI ACGT 3 cut(s) 193, 869, 999
TaqI TCGA 5 cut(s) 218, 257, 337, 403, 676
TasI AATT 5 cut(s) 159, 605, 745, 807, 875
TatI WGTACW 5 cut(s) 307, 345, 548, 779, 859
TauI GCSGC 1 cut(s) 692
TfiI GAWTC 3 cut(s) 215, 668, 1039
Tru1I TTAA 4 cut(s) 174, 749, 915, 1153
Tru9I TTAA 4 cut(s) 174, 749, 915, 1153
TscAI CASTG 2 cut(s) 27, 574
TseFI GTSAC 2 cut(s) 18, 560
TseI GCWGC 1 cut(s) 11
Tsp45I GTSAC 2 cut(s) 18, 560
TspDTI ATGAA 6 cut(s) 40, 72, 143, 935, 1084, 1112
TspMI CCCGGG 1 cut(s) 706
TspRI CASTG 2 cut(s) 27, 574
Van91I CCANNNNNTGG 1 cut(s) 437
VpaK11BI GGWCC 2 cut(s) 25, 447
XapI RAATTY 3 cut(s) 159, 605, 745
XbaI TCTAGA 1 cut(s) 598
XceI RCATGY 1 cut(s) 314
XmaI CCCGGG 1 cut(s) 706
XmnI GAANNNNTTC 1 cut(s) 1043
XspI CTAG 1 cut(s) 599
ZrmI AGTACT 1 cut(s) 550
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.