Rmu_sc0004494.1_g000008

Cyclic nucleotide-gated ion channel 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004494.1
OG0000119
Physical Location & Seq
Reverse (-)
45705 .. 49336
3632 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004494.1_g000008.1.cds

Sequence Viewer

Length: 1317 bp
atgaacagtggaggacaatcaatattgtcagagacaaaatggcctacctttaaggaattttttgacccccagggggccttcattgcaatgtggtataagatatctgtgatttcatgtctgattttagtaaccgcagatcctttgttctcctacatcccctacatcaacaaagataaaaagggcattgatggggacaagagggtgagaactgcagctctagccctccgatcactcaccgaaatgactttcataatgcatattatacatgaaattcgtgttagtaccaacactgtggtgtcagagatatcaaaaagaggaaagccaggttggccatggaaaaaggcagagttacttggctttgccaaggcaatatctcagaagatgtcctggttatctatctccatcattagactttatagccattcttccgatcccacaagtggcgctgttggtattctttctgaaaatggatggctcagattacagaaagaagattttaaacgggtaccgatgcttcgatatatggatgaaagtgtgttaaaactcgtctgcgacaatctgaaaccagtaatctacacggagaacagttatgtaattcgagcaggagaaccacttgatctaatgctcttcaacgcagaaggcattatatggacttacacaacaagtactgatggttcaataaaattgggttcctcaatcacactgtgtcttggtaaaggtgatttctatcgagaagaacttttgagttgggcttcctcatacatgtccttcttcgacctccctatctcgacccaaaatgtaaaatgccatacaaaagttgaagccttttctctcatggcaaaggacttgaaggctgtggtctccaaattctggtggcatttcagcaaggcggttcccgatttgaacagaaacaattctcagctgcaggaattggctctttcttccctaagagcccgtcgccgtaatcgatcaaagaagcatataaaagctcctcaattgtctacttactcccaagaacttgggtacctgcggctatacccttacatatcgaagccactgcacccaacagcaaagacgtcacatatctgctcagccttgacggcaagggcatgcacctgttttccgaccaccggtatacgaagcaaaccgggggacttgaaggcgcagggtaaccccaaaggcgaggatccgacttcaaacccggttgaggtggtggagggctcggagaatccgaatacgaaaccgaaggaggtcggcgtggcggatgttgaatgcgggttggagatcagaggaagaggtcaaggttgtcgccgttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
Ion_trans

Protein Analysis

438

Amino Acids

49.15

Weight (kDa)

9.39

Isoelectric Point (pI)

46.95

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000119)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g10570 FvH4_4g36390 FvH4_7g31840 FvH4_7g31840 FvH4_7g31850 FvH4_7g31850 FvH4_7g31861 FvH4_7g31861 FvH4_7g31950
malus_domestica MD01G1054600.v1.1 MD01G1221100.v1.1 MD01G1221400.v1.1 MD01G1221600.v1.1 MD01G1221800.v1.1 MD01G1222000.v1.1 MD01G1222100.v1.1 MD07G1140800.v1.1 MD07G1291200.v1.1 MD07G1291400.v1.1 MD07G1291500.v1.1 MD07G1291700.v1.1 MD07G1292500.v1.1 MD07G1292700.v1.1 MD07G1292800.v1.1 MD07G1292900.v1.1 MD08G1241600.v1.1 MD11G1083800.v1.1 MD15G1431600.v1.1
prunus_persica Prupe.1G017800_v2.0.a1 Prupe.1G017800_v2.0.a1 Prupe.1G162800_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312700_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G143000_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1
pyrus_communis pycom01g23050 pycom01g23070 pycom01g23090 pycom01g23100 pycom01g23110 pycom01g23120 pycom01g23170 pycom07g26410 pycom07g26440 pycom07g26470 pycom07g26480 pycom07g26490 pycom07g26500 pycom07g26510 pycom07g26530 pycom07g26540 pycom07g26570 pycom07g26580 pycom07g26590 pycom08g20940
rosa_chinensis RchiOBHm_Chr1g0324571 RchiOBHm_Chr1g0336181 RchiOBHm_Chr1g0381061 RchiOBHm_Chr1g0381091 RchiOBHm_Chr1g0381121 RchiOBHm_Chr1g0381131 RchiOBHm_Chr1g0381141 RchiOBHm_Chr1g0381161 RchiOBHm_Chr1g0381211 RchiOBHm_Chr2g0110361 RchiOBHm_Chr2g0120231 RchiOBHm_Chr3g0486281 RchiOBHm_Chr3g0486311 RchiOBHm_Chr3g0486401 RchiOBHm_Chr4g0409511 RchiOBHm_Chr4g0409521 RchiOBHm_Chr5g0017271 RchiOBHm_Chr5g0048781 RchiOBHm_Chr5g0048811
rosa_laevigata RLG00000002401 RLG00000008559 RLG00000017798 RLG00000017799 RLG00000023082 RLG00000023088 RLG00000026230 RLG00000026238 RLG00000026240 RLG00000026241 RLG00000026242 RLG00000026243 RLG00000026244 RLG00000026246 RLG00000026247 RLG00000026248 RLG00000029876 RLG00000030189 RLG00000034579
rosa_multiflora Rmu_co8101374.1_g000001 Rmu_co8309149.1_g000001 Rmu_co8450063.1_g000001 Rmu_sc0000441.1_g000094 Rmu_sc0000479.1_g000005 Rmu_sc0000647.1_g000006 Rmu_sc0001393.1_g000031 Rmu_sc0001423.1_g000037 Rmu_sc0001616.1_g000015 Rmu_sc0001857.1_g000011 Rmu_sc0002183.1_g000013 Rmu_sc0002183.1_g000028 Rmu_sc0002183.1_g000030 Rmu_sc0002688.1_g000003 Rmu_sc0002688.1_g000020 Rmu_sc0003801.1_g000003 Rmu_sc0003801.1_g000004 Rmu_sc0004125.1_g000006 Rmu_sc0004494.1_g000005 Rmu_sc0004494.1_g000006 Rmu_sc0004494.1_g000008 Rmu_sc0004494.1_g000009 Rmu_sc0005842.1_g000004 Rmu_sc0006872.1_g000001 Rmu_sc0006872.1_g000005 Rmu_sc0006872.1_g000009 Rmu_sc0006872.1_g000010 Rmu_sc0008053.1_g000026
rosa_roxburghii Rroxscaffold_159G00432960 Rroxscaffold_1G00033060 Rroxscaffold_2G00123150 Rroxscaffold_2G00123170 Rroxscaffold_2G00133500 Rroxscaffold_2G00133550 Rroxscaffold_4G00278650 Rroxscaffold_4G00278750 Rroxscaffold_4G00278790 Rroxscaffold_4G00278800 Rroxscaffold_4G00278810 Rroxscaffold_4G00325390 Rroxscaffold_5G00354010 Rroxscaffold_6G00395890 Rroxscaffold_6G00395900 Rroxscaffold_6G00395920
rosa_rugosa Rorug01G0046900.1 Rorug01G0427000 Rorug01G0427100 Rorug01G0427200 Rorug01G0427300 Rorug01G0427400 Rorug01G0427500 Rorug01G0427500 Rorug01G0427600 Rorug01G0427600 Rorug01G0427700 Rorug01G0427700 Rorug01G0427800 Rorug01G0428700 Rorug02G0166400 Rorug02G0166500 Rorug02G0166500 Rorug02G0166600 Rorug02G0166600 Rorug02G0166700 Rorug02G0167300 Rorug02G0167300 Rorug02G0167300 Rorug03G0224600 Rorug03G0224600 Rorug04G0094400 Rorug05G0241100 Rorug05G0241200
rosa_samantha Rh1BG407700 Rh1BG407900 Rh1BG409000 Rh1CG064700 Rh1CG420900 Rh1CG421000 Rh1CG421200 Rh1CG421300 Rh1CG421800 Rh1CG421900 Rh1CG422000 Rh1CG422200 Rh1CG422300 Rh1CG423600 Rh1DG437600 Rh1DG438900 Rh1DG439000 Rh1DG440300 Rh2AG219100 Rh2CG220700 Rh2DG225300 Rh3AG274400 Rh3AG274600 Rh3CG308900 Rh3DG305800 Rh4AG156400 Rh5AG129000 Rh5AG320900 Rh5CG139600
rosa_wichuraiana Rw1G005300 Rw1G039280 Rw1G039300 Rw1G039310 Rw1G039320 Rw1G039330 Rw1G039340 Rw1G039360 Rw1G039390 Rw2G016910 Rw2G022800 Rw3G024330 Rw3G024340 Rw3G024350 Rw3G024400 Rw4G012810 Rw5G030120 Rw5G030280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1079
Acc36I ACCTGC 1 cut(s) 1035
Acc65I GGTACC 2 cut(s) 505, 1023
AccB1I GGYRCC 2 cut(s) 505, 1023
AccB7I CCANNNNNTGG 1 cut(s) 870
AccI GTMKAC 2 cut(s) 1001, 1135
AciI CCGC 5 cut(s) 132, 890, 1030, 1262, 1275
AclWI GGATC 4 cut(s) 131, 425, 1181, 1194
AcoI YGGCCR 1 cut(s) 329
AcsI RAATTY 3 cut(s) 56, 270, 866
AcyI GRCGYC 1 cut(s) 1076
AdeI CACNNNGTG 1 cut(s) 705
AfaI GTAC 4 cut(s) 283, 507, 667, 1025
AfiI CCNNNNNNNGG 5 cut(s) 73, 440, 870, 1130, 1207
AflIII ACRYGT 1 cut(s) 762
AgeI ACCGGT 1 cut(s) 1130
AgsI TTSAA 8 cut(s) 631, 678, 821, 850, 904, 1159, 1197, 1271
AjnI CCWGG 3 cut(s) 69, 322, 386
AjuI GAANNNNNNNTTGG 2 cut(s) 310, 342
AleI CACNNNNGTG 1 cut(s) 293
AluBI AGCT 3 cut(s) 215, 922, 989
AluI AGCT 3 cut(s) 215, 922, 989
Alw26I GTCTC 2 cut(s) 26, 865
AlwI GGATC 4 cut(s) 131, 425, 1181, 1194
AoxI GGCC 3 cut(s) 41, 75, 329
ApeKI GCWGC 2 cut(s) 212, 922
ApoI RAATTY 3 cut(s) 56, 270, 866
AsiGI ACCGGT 1 cut(s) 1130
Asp700I GAANNNNTTC 1 cut(s) 913
Asp718I GGTACC 2 cut(s) 505, 1023
AspLEI GCGC 2 cut(s) 446, 1165
AspS9I GGNCC 1 cut(s) 75
AsuC2I CCSGG 2 cut(s) 1149, 1202
AsuHPI GGTGA 3 cut(s) 214, 226, 731
BaeI ACNNNNGTAYC 2 cut(s) 1007, 1040
BalI TGGCCA 1 cut(s) 331
BamHI GGATCC 1 cut(s) 1186
BanI GGYRCC 2 cut(s) 505, 1023
BanII GRGCYC 2 cut(s) 955, 1223
BarI GAAGNNNNNNTAC 2 cut(s) 498, 530
BbvI GCAGC 2 cut(s) 224, 909
BccI CCATC 4 cut(s) 182, 410, 465, 665
BceAI ACGGC 3 cut(s) 945, 1116, 1296
BcgI CGANNNNNNTGC 2 cut(s) 1039, 1073
BciT130I CCWGG 3 cut(s) 71, 324, 388
BcnI CCSGG 2 cut(s) 1149, 1202
BcoDI GTCTC 2 cut(s) 26, 865
BfaI CTAG 1 cut(s) 218
BfmI CTRYAG 2 cut(s) 210, 923
BfoI RGCGCY 1 cut(s) 447
BfuAI ACCTGC 1 cut(s) 1035
BglI GCCNNNNNGGC 2 cut(s) 328, 1100
BisI GCNGC 3 cut(s) 213, 923, 1031
BlpI GCTNAGC 1 cut(s) 1090
BlsI GCNGC 3 cut(s) 214, 924, 1032
BmcAI AGTACT 1 cut(s) 667
Bme1390I CCNGG 5 cut(s) 71, 324, 388, 1149, 1202
BmgT120I GGNCC 1 cut(s) 75
BmiI GGNNCC 6 cut(s) 76, 507, 691, 894, 1025, 1188
BmrFI CCNGG 5 cut(s) 71, 324, 388, 1149, 1202
BmsI GCATC 1 cut(s) 501
Bpu1102I GCTNAGC 1 cut(s) 1090
BpuMI CCSGG 2 cut(s) 1149, 1202
Bsa29I ATCGAT 1 cut(s) 967
BsaBI GATNNNNATC 1 cut(s) 726
BsaHI GRCGYC 1 cut(s) 1076
BsaI GGTCTC 1 cut(s) 865
BsaJI CCNNGG 5 cut(s) 69, 70, 332, 363, 1148
BsaWI WCCGGW 1 cut(s) 1130
Bsc4I CCNNNNNNNGG 5 cut(s) 73, 440, 870, 1130, 1207
Bse118I RCCGGY 1 cut(s) 1130
Bse1I ACTGG 1 cut(s) 566
Bse3DI GCAATG 2 cut(s) 81, 93
Bse8I GATNNNNATC 1 cut(s) 726
BseBI CCWGG 3 cut(s) 71, 324, 388
BseCI ATCGAT 1 cut(s) 967
BseDI CCNNGG 5 cut(s) 69, 70, 332, 363, 1148
BseGI GGATG 4 cut(s) 153, 476, 532, 1270
BseJI GATNNNNATC 1 cut(s) 726
BseLI CCNNNNNNNGG 5 cut(s) 73, 440, 870, 1130, 1207
BseMI GCAATG 2 cut(s) 81, 93
BseMII CTCAG 4 cut(s) 389, 490, 932, 1104
BseNI ACTGG 1 cut(s) 566
BseRI GAGGAG 1 cut(s) 981
BseXI GCAGC 2 cut(s) 224, 909
BsgI GTGCAG 1 cut(s) 1043
BshFI GGCC 3 cut(s) 43, 77, 331
BshNI GGYRCC 2 cut(s) 505, 1023
BshTI ACCGGT 1 cut(s) 1130
BshVI ATCGAT 1 cut(s) 967
BsiSI CCGG 3 cut(s) 1131, 1148, 1202
BslFI GGGAC 2 cut(s) 206, 1166
BslI CCNNNNNNNGG 5 cut(s) 73, 440, 870, 1130, 1207
BsmAI GTCTC 2 cut(s) 26, 865
BsmFI GGGAC 2 cut(s) 206, 1166
BsmI GAATGC 1 cut(s) 1277
BsnI GGCC 3 cut(s) 43, 77, 331
Bso31I GGTCTC 1 cut(s) 865
Bsp1286I GDGCHC 2 cut(s) 955, 1223
Bsp143I GATC 7 cut(s) 136, 227, 430, 616, 968, 1186, 1284
Bsp1720I GCTNAGC 1 cut(s) 1090
Bsp19I CCATGG 1 cut(s) 332
BspACI CCGC 5 cut(s) 132, 890, 1030, 1262, 1275
BspANI GGCC 3 cut(s) 43, 77, 331
BspCNI CTCAG 4 cut(s) 388, 489, 931, 1103
BspDI ATCGAT 1 cut(s) 967
BspLI GGNNCC 6 cut(s) 76, 507, 691, 894, 1025, 1188
BspMAI CTGCAG 2 cut(s) 214, 927
BspMI ACCTGC 1 cut(s) 1035
BspPI GGATC 4 cut(s) 131, 425, 1181, 1194
BspQI GCTCTTC 1 cut(s) 632
BspT107I GGYRCC 2 cut(s) 505, 1023
BspTNI GGTCTC 1 cut(s) 865
BsrDI GCAATG 2 cut(s) 81, 93
BsrFI RCCGGY 1 cut(s) 1130
BsrI ACTGG 1 cut(s) 566
BssAI RCCGGY 1 cut(s) 1130
BssECI CCNNGG 5 cut(s) 69, 70, 332, 363, 1148
BssMI GATC 7 cut(s) 136, 227, 430, 616, 968, 1186, 1284
BssNAI GTATAC 1 cut(s) 1136
BssNI GRCGYC 1 cut(s) 1076
BssT1I CCWWGG 2 cut(s) 332, 363
Bst1107I GTATAC 1 cut(s) 1136
Bst2UI CCWGG 3 cut(s) 71, 324, 388
Bst4CI ACNGT 4 cut(s) 8, 292, 587, 705
Bst6I CTCTTC 2 cut(s) 632, 1288
BstACI GRCGYC 1 cut(s) 1076
BstC8I GCNNGC 1 cut(s) 1111
BstDEI CTNAG 5 cut(s) 375, 476, 918, 947, 1090
BstDSI CCRYGG 1 cut(s) 332
BstEII GGTNACC 1 cut(s) 1169
BstF5I GGATG 4 cut(s) 153, 476, 532, 1270
BstH2I RGCGCY 1 cut(s) 447
BstHHI GCGC 2 cut(s) 446, 1165
BstKTI GATC 7 cut(s) 139, 230, 433, 619, 971, 1189, 1287
BstMAI GTCTC 2 cut(s) 26, 865
BstMBI GATC 7 cut(s) 136, 227, 430, 616, 968, 1186, 1284
BstMWI GCNNNNNNNGC 4 cut(s) 83, 218, 328, 1100
BstNI CCWGG 3 cut(s) 71, 324, 388
BstNSI RCATGY 2 cut(s) 766, 1113
BstPI GGTNACC 1 cut(s) 1169
BstSCI CCNGG 5 cut(s) 69, 322, 386, 1147, 1200
BstSFI CTRYAG 2 cut(s) 210, 923
BstV1I GCAGC 2 cut(s) 224, 909
BstX2I RGATCY 2 cut(s) 136, 1186
BstXI CCANNNNNNTGG 2 cut(s) 292, 1019
BstYI RGATCY 2 cut(s) 136, 1186
BstZ17I GTATAC 1 cut(s) 1136
Bsu15I ATCGAT 1 cut(s) 967
BsuRI GGCC 3 cut(s) 43, 77, 331
BsuTUI ATCGAT 1 cut(s) 967
BtgI CCRYGG 1 cut(s) 332
BtsCI GGATG 4 cut(s) 153, 476, 532, 1270
BtsI GCAGTG 1 cut(s) 1055
BtsIMutI CAGTG 4 cut(s) 13, 288, 701, 1055
BveI ACCTGC 1 cut(s) 1035
Cac8I GCNNGC 1 cut(s) 1111
CfoI GCGC 2 cut(s) 446, 1165
Cfr10I RCCGGY 1 cut(s) 1130
Cfr13I GGNCC 1 cut(s) 75
ClaI ATCGAT 1 cut(s) 967
Csp6I GTAC 4 cut(s) 282, 506, 666, 1024
CspAI ACCGGT 1 cut(s) 1130
CviAII CATG 6 cut(s) 114, 266, 333, 763, 835, 1110
CviQI GTAC 4 cut(s) 282, 506, 666, 1024
DdeI CTNAG 5 cut(s) 375, 476, 918, 947, 1090
DpnI GATC 7 cut(s) 138, 229, 432, 618, 970, 1188, 1286
DpnII GATC 7 cut(s) 136, 227, 430, 616, 968, 1186, 1284
DraI TTTAAA 1 cut(s) 499
DraIII CACNNNGTG 1 cut(s) 705
EaeI YGGCCR 1 cut(s) 329
Eam1104I CTCTTC 2 cut(s) 632, 1288
EarI CTCTTC 2 cut(s) 632, 1288
EciI GGCGGA 1 cut(s) 1277
Eco130I CCWWGG 2 cut(s) 332, 363
Eco24I GRGCYC 2 cut(s) 955, 1223
Eco31I GGTCTC 1 cut(s) 865
Eco32I GATATC 2 cut(s) 102, 306
Eco91I GGTNACC 1 cut(s) 1169
EcoO109I RGGNCCY 1 cut(s) 75
EcoO65I GGTNACC 1 cut(s) 1169
EcoRII CCWGG 3 cut(s) 69, 322, 386
EcoRV GATATC 2 cut(s) 102, 306
EcoT14I CCWWGG 2 cut(s) 332, 363
EcoT22I ATGCAT 1 cut(s) 258
EcoT38I GRGCYC 2 cut(s) 955, 1223
ErhI CCWWGG 2 cut(s) 332, 363
FaeI CATG 6 cut(s) 117, 269, 336, 766, 838, 1113
FaqI GGGAC 2 cut(s) 206, 1166
FatI CATG 6 cut(s) 113, 265, 332, 762, 834, 1109
FauI CCCGC 1 cut(s) 1268
FblI GTMKAC 2 cut(s) 1001, 1135
Fnu4HI GCNGC 3 cut(s) 213, 923, 1031
FokI GGATG 4 cut(s) 140, 483, 539, 1277
FriOI GRGCYC 2 cut(s) 955, 1223
Fsp4HI GCNGC 3 cut(s) 213, 923, 1031
FspBI CTAG 1 cut(s) 218
GlaI GCGC 2 cut(s) 445, 1164
GluI GCNGC 3 cut(s) 213, 923, 1031
HaeII RGCGCY 1 cut(s) 447
HaeIII GGCC 3 cut(s) 43, 77, 331
HapII CCGG 3 cut(s) 1131, 1148, 1202
HhaI GCGC 2 cut(s) 446, 1165
Hin1I GRCGYC 1 cut(s) 1076
Hin1II CATG 6 cut(s) 117, 269, 336, 766, 838, 1113
Hin6I GCGC 2 cut(s) 444, 1163
HinP1I GCGC 2 cut(s) 444, 1163
HinfI GANTC 1 cut(s) 1228
HpaII CCGG 3 cut(s) 1131, 1148, 1202
HphI GGTGA 3 cut(s) 214, 226, 731
Hpy166II GTNNAC 2 cut(s) 1002, 1136
Hpy188III TCNNGA 3 cut(s) 731, 787, 896
Hpy8I GTNNAC 2 cut(s) 1002, 1136
Hpy99I CGWCG 1 cut(s) 960
HpyAV CCTTC 6 cut(s) 88, 632, 778, 844, 1153, 1240
HpyCH4III ACNGT 4 cut(s) 8, 292, 587, 705
HpyCH4IV ACGT 1 cut(s) 1076
HpyCH4V TGCA 6 cut(s) 86, 212, 256, 925, 1060, 1113
HpyF10VI GCNNNNNNNGC 4 cut(s) 83, 218, 328, 1100
HpyF3I CTNAG 5 cut(s) 375, 476, 918, 947, 1090
HpySE526I ACGT 1 cut(s) 1076
Hsp92I GRCGYC 1 cut(s) 1076
Hsp92II CATG 6 cut(s) 117, 269, 336, 766, 838, 1113
HspAI GCGC 2 cut(s) 444, 1163
KpnI GGTACC 2 cut(s) 509, 1027
Kzo9I GATC 7 cut(s) 136, 227, 430, 616, 968, 1186, 1284
LguI GCTCTTC 1 cut(s) 632
LmnI GCTCC 1 cut(s) 994
Lsp1109I GCAGC 2 cut(s) 224, 909
LweI GCATC 1 cut(s) 501
MaeI CTAG 1 cut(s) 218
MaeII ACGT 1 cut(s) 1076
MaeIII GTNAC 4 cut(s) 127, 348, 1077, 1169
MalI GATC 7 cut(s) 138, 229, 432, 618, 970, 1188, 1286
MboI GATC 7 cut(s) 136, 227, 430, 616, 968, 1186, 1284
MboII GAAGA 8 cut(s) 391, 417, 503, 619, 746, 763, 933, 1305
MfeI CAATTG 1 cut(s) 995
MflI RGATCY 2 cut(s) 136, 1186
MhlI GDGCHC 2 cut(s) 955, 1223
MlsI TGGCCA 1 cut(s) 331
MluCI AATT 8 cut(s) 56, 270, 594, 683, 866, 913, 929, 995
MluNI TGGCCA 1 cut(s) 331
MmeI TCCRAC 3 cut(s) 1148, 1214, 1260
Mox20I TGGCCA 1 cut(s) 331
Mph1103I ATGCAT 1 cut(s) 258
MroXI GAANNNNTTC 1 cut(s) 913
MscI TGGCCA 1 cut(s) 331
MseI TTAA 3 cut(s) 51, 498, 539
MslI CAYNNNNRTG 3 cut(s) 86, 239, 293
Msp20I TGGCCA 1 cut(s) 331
MspA1I CMGCKG 1 cut(s) 922
MspI CCGG 3 cut(s) 1131, 1148, 1202
MspR9I CCNGG 5 cut(s) 71, 324, 388, 1149, 1202
MunI CAATTG 1 cut(s) 995
Mva1269I GAATGC 1 cut(s) 1277
MvaI CCWGG 3 cut(s) 71, 324, 388
MwoI GCNNNNNNNGC 4 cut(s) 83, 218, 328, 1100
NciI CCSGG 2 cut(s) 1149, 1202
NcoI CCATGG 1 cut(s) 332
NdeII GATC 7 cut(s) 136, 227, 430, 616, 968, 1186, 1284
NlaIII CATG 6 cut(s) 117, 269, 336, 766, 838, 1113
NlaIV GGNNCC 6 cut(s) 76, 507, 691, 894, 1025, 1188
NmuCI GTSAC 1 cut(s) 1077
NsiI ATGCAT 1 cut(s) 258
NspI RCATGY 2 cut(s) 766, 1113
OliI CACNNNNGTG 1 cut(s) 293
PaeI GCATGC 1 cut(s) 1113
PasI CCCWGGG 1 cut(s) 70
PciI ACATGT 1 cut(s) 762
PciSI GCTCTTC 1 cut(s) 632
PcsI WCGNNNNNNNCGW 2 cut(s) 964, 1229
PctI GAATGC 1 cut(s) 1277
PdmI GAANNNNTTC 1 cut(s) 913
PfeI GAWTC 1 cut(s) 1228
PflMI CCANNNNNTGG 1 cut(s) 870
PinAI ACCGGT 1 cut(s) 1130
PkrI GCNGC 3 cut(s) 214, 924, 1032
PscI ACATGT 1 cut(s) 762
Psp6I CCWGG 3 cut(s) 69, 322, 386
PspEI GGTNACC 1 cut(s) 1169
PspGI CCWGG 3 cut(s) 69, 322, 386
PspN4I GGNNCC 6 cut(s) 76, 507, 691, 894, 1025, 1188
PspPI GGNCC 1 cut(s) 75
PsrI GAACNNNNNNTAC 2 cut(s) 658, 690
PstI CTGCAG 2 cut(s) 214, 927
PsuI RGATCY 2 cut(s) 136, 1186
PvuII CAGCTG 1 cut(s) 922
RsaI GTAC 4 cut(s) 283, 507, 667, 1025
RsaNI GTAC 4 cut(s) 282, 506, 666, 1024
RseI CAYNNNNRTG 3 cut(s) 86, 239, 293
SapI GCTCTTC 1 cut(s) 632
SaqAI TTAA 3 cut(s) 51, 498, 539
SatI GCNGC 3 cut(s) 213, 923, 1031
Sau3AI GATC 7 cut(s) 136, 227, 430, 616, 968, 1186, 1284
Sau96I GGNCC 1 cut(s) 75
ScaI AGTACT 1 cut(s) 667
ScrFI CCNGG 5 cut(s) 71, 324, 388, 1149, 1202
SduI GDGCHC 2 cut(s) 955, 1223
SfaNI GCATC 1 cut(s) 501
SfcI CTRYAG 2 cut(s) 210, 923
SmiMI CAYNNNNRTG 3 cut(s) 86, 239, 293
SphI GCATGC 1 cut(s) 1113
Sse9I AATT 8 cut(s) 56, 270, 594, 683, 866, 913, 929, 995
SsiI CCGC 5 cut(s) 132, 890, 1030, 1262, 1275
SspI AATATT 1 cut(s) 24
SspMI CTAG 1 cut(s) 218
StyD4I CCNGG 5 cut(s) 69, 322, 386, 1147, 1200
StyI CCWWGG 2 cut(s) 332, 363
TaaI ACNGT 4 cut(s) 8, 292, 587, 705
TaiI ACGT 1 cut(s) 1079
TaqI TCGA 7 cut(s) 517, 598, 730, 774, 788, 967, 1049
TasI AATT 8 cut(s) 56, 270, 594, 683, 866, 913, 929, 995
TatI WGTACW 1 cut(s) 665
TauI GCSGC 1 cut(s) 1033
TfiI GAWTC 1 cut(s) 1228
Tru1I TTAA 3 cut(s) 51, 498, 539
Tru9I TTAA 3 cut(s) 51, 498, 539
TscAI CASTG 4 cut(s) 13, 295, 708, 1062
TseFI GTSAC 1 cut(s) 1077
TseI GCWGC 2 cut(s) 212, 922
Tsp45I GTSAC 1 cut(s) 1077
TspDTI ATGAA 6 cut(s) 17, 70, 102, 238, 282, 543
TspGWI ACGGA 1 cut(s) 593
TspRI CASTG 4 cut(s) 13, 295, 708, 1062
Van91I CCANNNNNTGG 1 cut(s) 870
XapI RAATTY 3 cut(s) 56, 270, 866
XceI RCATGY 2 cut(s) 766, 1113
XcmI CCANNNNNNNNNTGG 1 cut(s) 330
XmiI GTMKAC 2 cut(s) 1001, 1135
XmnI GAANNNNTTC 1 cut(s) 913
XspI CTAG 1 cut(s) 218
ZraI GACGTC 1 cut(s) 1077
ZrmI AGTACT 1 cut(s) 667
Zsp2I ATGCAT 1 cut(s) 258
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.