Rroxscaffold_1G00033060

Cyclic nucleotide-gated ion channel 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000119
Physical Location & Seq
Forward (+)
47548639 .. 47553426
4788 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00033060.1

Sequence Viewer

Length: 1410 bp
ATGCGTCATTCGTCTATACAACTTAGACAAAAGACTGGAATATGGGTTAAAGGTTCATTCTATTTTTTCTTGTACATCCTTGCCAGCCATGTACTTGGAGCCTTTTGGTATTATTTTTCTATTCAACAGGAGACTTCTTGTTGGCACCGGGCGTGCAAAAAGCATGGTGGAGTAAAATGTAATTTTTACTGCCATGAAGACATGACTTCAAGAGATTTAACATTCATCAATTCTATAGATAAATATTGCCTTGTAGATGTTCCGGCAAATGAAACTGCACCATTTGATTTTGGAATCTTTCTTGATTCTCTTAAGAATAATAACACGGCATCAATACAATTTCCAAAGAAGTTTTTCTACTCTTTTTGGTGGGGACTTCGAAATCTGAGTAATTTTGGCACAAATTTGGAAACAAGTACCTACGTTTGGGAAAACTGCTTTGCAATTCTGATATCAATCATTGGCATGCTATTATTCTTATATCTCATTGGAAAGATACAGACATTTATTTCGATGCAAACTGCGAATTATGAGGAGAGAAGAAGAAAATTAAAAGATGATGAGGAGAGAAGAACAAAATTCAAAGATGATGAGGAGAGAAGAAACAAATTCAAATCAAAAAAGCTAGATATACAAATGTGGATGACAAGTAATCATCTCAAGAGAGAGATGATGGAAGACATCAGAGTGAATGCAAATGGAAAGTGGGAAGAAATACGAGATGCAAATATAGAGAATCTCTTATCTATTCTTCCCGTGCAATCTCGAAAAAATCTTAAACATTCTCTTTGCATGGAAATGCTGAGCAAGGTGCCAAAGCTTAAAACTCTGAATGGTGAAGCTTTGACATCGATCTGCGAATATCTGAAGCCAGTGGTCTATCAGGATAATAGCTTTGTTTTCCAAGAAGGAGAACCACTTGATCGCATTCTCTTCATTACAGAAGGCTTAATATGGACATACCAGGCGGCGGGCACTACTGATAGTAGTGGCACTAGTCAAAATGGAAAAGGAAAAACAGGTTTCAGTTTTCTTGAGAAAGGTGGATTTTACGGAGATGATCAACTTCTGAGTTGGGCTATAGCATCACAAAAGAATGATCTTTCCTTTAGCAACCTTCCAATCTCCAAAGTGAATGTGAAATGCCATGGAAAAGTAGAAGGCTTTGTACTCATGGTCAAGGACTTGAAAACTCTAGTCTCCGCTAATTACAAAGTTTATTGGGGTTTCCACGATTCTTCTCAGGAAAGAGAGGAGGCAGCAATTCAAGCCATAAAGAAAGTACGGGTCCTTCGTAACAAAGATAGACCAAAGGGAAATCCAATGATGTCACTCCCAGCCGGGCCACTGGCTACAATAGTCGATGCTGATGAGAACTCGCCAACAACATCAGGGACGAAGGATTTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
Ion_trans

Protein Analysis

469

Amino Acids

54.02

Weight (kDa)

8.89

Isoelectric Point (pI)

37.92

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000119)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g10570 FvH4_4g36390 FvH4_7g31840 FvH4_7g31840 FvH4_7g31850 FvH4_7g31850 FvH4_7g31861 FvH4_7g31861 FvH4_7g31950
malus_domestica MD01G1054600.v1.1 MD01G1221100.v1.1 MD01G1221400.v1.1 MD01G1221600.v1.1 MD01G1221800.v1.1 MD01G1222000.v1.1 MD01G1222100.v1.1 MD07G1140800.v1.1 MD07G1291200.v1.1 MD07G1291400.v1.1 MD07G1291500.v1.1 MD07G1291700.v1.1 MD07G1292500.v1.1 MD07G1292700.v1.1 MD07G1292800.v1.1 MD07G1292900.v1.1 MD08G1241600.v1.1 MD11G1083800.v1.1 MD15G1431600.v1.1
prunus_persica Prupe.1G017800_v2.0.a1 Prupe.1G017800_v2.0.a1 Prupe.1G162800_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312700_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G143000_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1
pyrus_communis pycom01g23050 pycom01g23070 pycom01g23090 pycom01g23100 pycom01g23110 pycom01g23120 pycom01g23170 pycom07g26410 pycom07g26440 pycom07g26470 pycom07g26480 pycom07g26490 pycom07g26500 pycom07g26510 pycom07g26530 pycom07g26540 pycom07g26570 pycom07g26580 pycom07g26590 pycom08g20940
rosa_chinensis RchiOBHm_Chr1g0324571 RchiOBHm_Chr1g0336181 RchiOBHm_Chr1g0381061 RchiOBHm_Chr1g0381091 RchiOBHm_Chr1g0381121 RchiOBHm_Chr1g0381131 RchiOBHm_Chr1g0381141 RchiOBHm_Chr1g0381161 RchiOBHm_Chr1g0381211 RchiOBHm_Chr2g0110361 RchiOBHm_Chr2g0120231 RchiOBHm_Chr3g0486281 RchiOBHm_Chr3g0486311 RchiOBHm_Chr3g0486401 RchiOBHm_Chr4g0409511 RchiOBHm_Chr4g0409521 RchiOBHm_Chr5g0017271 RchiOBHm_Chr5g0048781 RchiOBHm_Chr5g0048811
rosa_laevigata RLG00000002401 RLG00000008559 RLG00000017798 RLG00000017799 RLG00000023082 RLG00000023088 RLG00000026230 RLG00000026238 RLG00000026240 RLG00000026241 RLG00000026242 RLG00000026243 RLG00000026244 RLG00000026246 RLG00000026247 RLG00000026248 RLG00000029876 RLG00000030189 RLG00000034579
rosa_multiflora Rmu_co8101374.1_g000001 Rmu_co8309149.1_g000001 Rmu_co8450063.1_g000001 Rmu_sc0000441.1_g000094 Rmu_sc0000479.1_g000005 Rmu_sc0000647.1_g000006 Rmu_sc0001393.1_g000031 Rmu_sc0001423.1_g000037 Rmu_sc0001616.1_g000015 Rmu_sc0001857.1_g000011 Rmu_sc0002183.1_g000013 Rmu_sc0002183.1_g000028 Rmu_sc0002183.1_g000030 Rmu_sc0002688.1_g000003 Rmu_sc0002688.1_g000020 Rmu_sc0003801.1_g000003 Rmu_sc0003801.1_g000004 Rmu_sc0004125.1_g000006 Rmu_sc0004494.1_g000005 Rmu_sc0004494.1_g000006 Rmu_sc0004494.1_g000008 Rmu_sc0004494.1_g000009 Rmu_sc0005842.1_g000004 Rmu_sc0006872.1_g000001 Rmu_sc0006872.1_g000005 Rmu_sc0006872.1_g000009 Rmu_sc0006872.1_g000010 Rmu_sc0008053.1_g000026
rosa_roxburghii Rroxscaffold_159G00432960 Rroxscaffold_1G00033060 Rroxscaffold_2G00123150 Rroxscaffold_2G00123170 Rroxscaffold_2G00133500 Rroxscaffold_2G00133550 Rroxscaffold_4G00278650 Rroxscaffold_4G00278750 Rroxscaffold_4G00278790 Rroxscaffold_4G00278800 Rroxscaffold_4G00278810 Rroxscaffold_4G00325390 Rroxscaffold_5G00354010 Rroxscaffold_6G00395890 Rroxscaffold_6G00395900 Rroxscaffold_6G00395920
rosa_rugosa Rorug01G0046900.1 Rorug01G0427000 Rorug01G0427100 Rorug01G0427200 Rorug01G0427300 Rorug01G0427400 Rorug01G0427500 Rorug01G0427500 Rorug01G0427600 Rorug01G0427600 Rorug01G0427700 Rorug01G0427700 Rorug01G0427800 Rorug01G0428700 Rorug02G0166400 Rorug02G0166500 Rorug02G0166500 Rorug02G0166600 Rorug02G0166600 Rorug02G0166700 Rorug02G0167300 Rorug02G0167300 Rorug02G0167300 Rorug03G0224600 Rorug03G0224600 Rorug04G0094400 Rorug05G0241100 Rorug05G0241200
rosa_samantha Rh1BG407700 Rh1BG407900 Rh1BG409000 Rh1CG064700 Rh1CG420900 Rh1CG421000 Rh1CG421200 Rh1CG421300 Rh1CG421800 Rh1CG421900 Rh1CG422000 Rh1CG422200 Rh1CG422300 Rh1CG423600 Rh1DG437600 Rh1DG438900 Rh1DG439000 Rh1DG440300 Rh2AG219100 Rh2CG220700 Rh2DG225300 Rh3AG274400 Rh3AG274600 Rh3CG308900 Rh3DG305800 Rh4AG156400 Rh5AG129000 Rh5AG320900 Rh5CG139600
rosa_wichuraiana Rw1G005300 Rw1G039280 Rw1G039300 Rw1G039310 Rw1G039320 Rw1G039330 Rw1G039340 Rw1G039360 Rw1G039390 Rw2G016910 Rw2G022800 Rw3G024330 Rw3G024340 Rw3G024350 Rw3G024400 Rw4G012810 Rw5G030120 Rw5G030280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 144, 811
AciI CCGC 3 cut(s) 968, 971, 1203
AcsI RAATTY 3 cut(s) 403, 578, 608
AcuI CTGAAG 1 cut(s) 887
AfaI GTAC 5 cut(s) 74, 93, 418, 1170, 1284
AfiI CCNNNNNNNGG 2 cut(s) 426, 970
AflII CTTAAG 1 cut(s) 311
AgsI TTSAA 6 cut(s) 125, 210, 583, 613, 1189, 1268
AhlI ACTAGT 1 cut(s) 995
AjnI CCWGG 1 cut(s) 963
AluBI AGCT 4 cut(s) 625, 820, 842, 894
AluI AGCT 4 cut(s) 625, 820, 842, 894
Alw26I GTCTC 2 cut(s) 125, 1204
AoxI GGCC 1 cut(s) 1343
ApeKI GCWGC 1 cut(s) 1259
ApoI RAATTY 3 cut(s) 403, 578, 608
ArsI GACNNNNNNTTYG 3 cut(s) 493, 525, 1387
Asp700I GAANNNNTTC 1 cut(s) 353
AspS9I GGNCC 2 cut(s) 1288, 1343
AsuC2I CCSGG 2 cut(s) 149, 1342
AsuHPI GGTGA 1 cut(s) 848
AsuII TTCGAA 1 cut(s) 379
AvaII GGWCC 1 cut(s) 1288
BaeGI GKGCMC 1 cut(s) 977
BanI GGYRCC 2 cut(s) 144, 811
BarI GAAGNNNNNNTAC 6 cut(s) 341, 373, 1152, 1184, 1275, 1307
BbsI GAAGAC 2 cut(s) 204, 684
BbvI GCAGC 1 cut(s) 1271
BccI CCATC 1 cut(s) 667
BceAI ACGGC 1 cut(s) 342
BciT130I CCWGG 1 cut(s) 965
BclI TGATCA 1 cut(s) 1060
BcnI CCSGG 2 cut(s) 149, 1342
BcoDI GTCTC 2 cut(s) 125, 1204
BcuI ACTAGT 1 cut(s) 995
BfaI CTAG 3 cut(s) 626, 996, 1196
BfmI CTRYAG 2 cut(s) 234, 1080
BfrI CTTAAG 1 cut(s) 311
BisI GCNGC 2 cut(s) 969, 1260
BlpI GCTNAGC 1 cut(s) 803
BlsI GCNGC 2 cut(s) 970, 1261
Bme1390I CCNGG 3 cut(s) 149, 965, 1342
Bme18I GGWCC 1 cut(s) 1288
BmgT120I GGNCC 2 cut(s) 1288, 1343
BmiI GGNNCC 4 cut(s) 100, 146, 813, 1289
BmrFI CCNGG 3 cut(s) 149, 965, 1342
BmsI GCATC 5 cut(s) 338, 504, 712, 1094, 1354
BpiI GAAGAC 2 cut(s) 204, 684
Bpu1102I GCTNAGC 1 cut(s) 803
Bpu14I TTCGAA 1 cut(s) 379
BpuEI CTTGAG 2 cut(s) 644, 1055
BpuMI CCSGG 2 cut(s) 149, 1342
Bsa29I ATCGAT 1 cut(s) 851
BsaBI GATNNNNATC 1 cut(s) 455
BsaJI CCNNGG 1 cut(s) 1147
Bsc4I CCNNNNNNNGG 2 cut(s) 426, 970
Bse1I ACTGG 3 cut(s) 40, 872, 1353
Bse8I GATNNNNATC 1 cut(s) 455
BseBI CCWGG 1 cut(s) 965
BseCI ATCGAT 1 cut(s) 851
BseDI CCNNGG 1 cut(s) 1147
BseGI GGATG 2 cut(s) 75, 648
BseJI GATNNNNATC 1 cut(s) 455
BseLI CCNNNNNNNGG 2 cut(s) 426, 970
BseMII CTCAG 4 cut(s) 377, 794, 1061, 1256
BseNI ACTGG 3 cut(s) 40, 872, 1353
BseRI GAGGAG 4 cut(s) 548, 578, 608, 1268
BseSI GKGCMC 1 cut(s) 977
BseXI GCAGC 1 cut(s) 1271
BseYI CCCAGC 1 cut(s) 1336
BsgI GTGCAG 1 cut(s) 261
BshFI GGCC 1 cut(s) 1345
BshNI GGYRCC 2 cut(s) 144, 811
BshVI ATCGAT 1 cut(s) 851
BsiSI CCGG 3 cut(s) 148, 263, 1341
BslFI GGGAC 1 cut(s) 387
BslI CCNNNNNNNGG 2 cut(s) 426, 970
BsmAI GTCTC 2 cut(s) 125, 1204
BsmFI GGGAC 1 cut(s) 387
BsmI GAATGC 2 cut(s) 697, 927
BsnI GGCC 1 cut(s) 1345
Bsp119I TTCGAA 1 cut(s) 379
Bsp1286I GDGCHC 1 cut(s) 977
Bsp1407I TGTACA 1 cut(s) 72
Bsp143I GATC 4 cut(s) 852, 922, 1060, 1099
Bsp1720I GCTNAGC 1 cut(s) 803
Bsp19I CCATGG 1 cut(s) 1147
BspACI CCGC 3 cut(s) 968, 971, 1203
BspANI GGCC 1 cut(s) 1345
BspCNI CTCAG 4 cut(s) 378, 795, 1062, 1255
BspDI ATCGAT 1 cut(s) 851
BspLI GGNNCC 4 cut(s) 100, 146, 813, 1289
BspT104I TTCGAA 1 cut(s) 379
BspT107I GGYRCC 2 cut(s) 144, 811
BspTI CTTAAG 1 cut(s) 311
BsrGI TGTACA 1 cut(s) 72
BsrI ACTGG 3 cut(s) 40, 872, 1353
BssECI CCNNGG 1 cut(s) 1147
BssMI GATC 4 cut(s) 852, 922, 1060, 1099
BssT1I CCWWGG 1 cut(s) 1147
Bst2UI CCWGG 1 cut(s) 965
Bst6I CTCTTC 1 cut(s) 938
BstAFI CTTAAG 1 cut(s) 311
BstAUI TGTACA 1 cut(s) 72
BstBI TTCGAA 1 cut(s) 379
BstC8I GCNNGC 4 cut(s) 85, 154, 467, 973
BstDEI CTNAG 5 cut(s) 23, 386, 803, 1070, 1242
BstDSI CCRYGG 1 cut(s) 1147
BstF5I GGATG 2 cut(s) 75, 648
BstKTI GATC 4 cut(s) 855, 925, 1063, 1102
BstMAI GTCTC 2 cut(s) 125, 1204
BstMBI GATC 4 cut(s) 852, 922, 1060, 1099
BstMWI GCNNNNNNNGC 1 cut(s) 1268
BstNI CCWGG 1 cut(s) 965
BstNSI RCATGY 1 cut(s) 469
BstSCI CCNGG 3 cut(s) 147, 963, 1340
BstSFI CTRYAG 2 cut(s) 234, 1080
BstSLI GKGCMC 1 cut(s) 977
BstV1I GCAGC 1 cut(s) 1271
BstV2I GAAGAC 2 cut(s) 204, 684
BstXI CCANNNNNNTGG 1 cut(s) 95
Bsu15I ATCGAT 1 cut(s) 851
BsuRI GGCC 1 cut(s) 1345
BsuTUI ATCGAT 1 cut(s) 851
BtgI CCRYGG 1 cut(s) 1147
BtsCI GGATG 2 cut(s) 75, 648
BtsIMutI CAGTG 2 cut(s) 879, 1346
Cac8I GCNNGC 4 cut(s) 85, 154, 467, 973
Cfr13I GGNCC 2 cut(s) 1288, 1343
ClaI ATCGAT 1 cut(s) 851
Csp6I GTAC 5 cut(s) 73, 92, 417, 1169, 1283
CviAII CATG 8 cut(s) 89, 164, 194, 202, 466, 793, 1148, 1174
CviQI GTAC 5 cut(s) 73, 92, 417, 1169, 1283
DdeI CTNAG 5 cut(s) 23, 386, 803, 1070, 1242
DpnI GATC 4 cut(s) 854, 924, 1062, 1101
DpnII GATC 4 cut(s) 852, 922, 1060, 1099
Eam1104I CTCTTC 1 cut(s) 938
EarI CTCTTC 1 cut(s) 938
Eco130I CCWWGG 1 cut(s) 1147
Eco32I GATATC 1 cut(s) 453
Eco47I GGWCC 1 cut(s) 1288
Eco57I CTGAAG 1 cut(s) 887
EcoO109I RGGNCCY 1 cut(s) 1288
EcoRII CCWGG 1 cut(s) 963
EcoRV GATATC 1 cut(s) 453
EcoT14I CCWWGG 1 cut(s) 1147
ErhI CCWWGG 1 cut(s) 1147
FaeI CATG 8 cut(s) 92, 167, 197, 205, 469, 796, 1151, 1177
FaqI GGGAC 1 cut(s) 387
FatI CATG 8 cut(s) 88, 163, 193, 201, 465, 792, 1147, 1173
FauI CCCGC 1 cut(s) 964
FbaI TGATCA 1 cut(s) 1060
Fnu4HI GCNGC 2 cut(s) 969, 1260
FokI GGATG 2 cut(s) 62, 655
Fsp4HI GCNGC 2 cut(s) 969, 1260
FspBI CTAG 3 cut(s) 626, 996, 1196
GluI GCNGC 2 cut(s) 969, 1260
GsaI CCCAGC 1 cut(s) 1340
HaeIII GGCC 1 cut(s) 1345
HapII CCGG 3 cut(s) 148, 263, 1341
Hin1II CATG 8 cut(s) 92, 167, 197, 205, 469, 796, 1151, 1177
HindIII AAGCTT 2 cut(s) 818, 840
HinfI GANTC 4 cut(s) 294, 305, 736, 1235
HpaII CCGG 3 cut(s) 148, 263, 1341
HphI GGTGA 1 cut(s) 848
Hpy188I TCNGA 6 cut(s) 387, 450, 686, 831, 867, 1071
Hpy188III TCNNGA 7 cut(s) 210, 302, 661, 765, 884, 1034, 1244
HpyAV CCTTC 6 cut(s) 902, 938, 1127, 1154, 1301, 1393
HpyCH4IV ACGT 1 cut(s) 423
HpyCH4V TGCA 8 cut(s) 156, 278, 443, 517, 695, 725, 760, 792
HpyF10VI GCNNNNNNNGC 1 cut(s) 1268
HpyF3I CTNAG 5 cut(s) 23, 386, 803, 1070, 1242
HpySE526I ACGT 1 cut(s) 423
Hsp92II CATG 8 cut(s) 92, 167, 197, 205, 469, 796, 1151, 1177
Ksp22I TGATCA 1 cut(s) 1060
Kzo9I GATC 4 cut(s) 852, 922, 1060, 1099
LmnI GCTCC 1 cut(s) 98
Lsp1109I GCAGC 1 cut(s) 1271
LweI GCATC 5 cut(s) 338, 504, 712, 1094, 1354
MaeI CTAG 3 cut(s) 626, 996, 1196
MaeII ACGT 1 cut(s) 423
MaeIII GTNAC 2 cut(s) 1295, 1329
MalI GATC 4 cut(s) 854, 924, 1062, 1101
MboI GATC 4 cut(s) 852, 922, 1060, 1099
MhlI GDGCHC 1 cut(s) 977
MnlI CCTC 5 cut(s) 526, 556, 586, 1246, 1249
MroXI GAANNNNTTC 1 cut(s) 353
MseI TTAA 7 cut(s) 48, 218, 312, 551, 777, 822, 950
MslI CAYNNNNRTG 3 cut(s) 464, 686, 797
MspCI CTTAAG 1 cut(s) 311
MspI CCGG 3 cut(s) 148, 263, 1341
MspR9I CCNGG 3 cut(s) 149, 965, 1342
Mva1269I GAATGC 2 cut(s) 697, 927
MvaI CCWGG 1 cut(s) 965
MwoI GCNNNNNNNGC 1 cut(s) 1268
NciI CCSGG 2 cut(s) 149, 1342
NcoI CCATGG 1 cut(s) 1147
NdeII GATC 4 cut(s) 852, 922, 1060, 1099
NlaIII CATG 8 cut(s) 92, 167, 197, 205, 469, 796, 1151, 1177
NlaIV GGNNCC 4 cut(s) 100, 146, 813, 1289
NmuCI GTSAC 1 cut(s) 1329
NspI RCATGY 1 cut(s) 469
NspV TTCGAA 1 cut(s) 379
PaeI GCATGC 1 cut(s) 469
PcsI WCGNNNNNNNCGW 1 cut(s) 1291
PctI GAATGC 2 cut(s) 697, 927
PdmI GAANNNNTTC 1 cut(s) 353
PfeI GAWTC 4 cut(s) 294, 305, 736, 1235
PkrI GCNGC 2 cut(s) 970, 1261
PpuMI RGGWCCY 1 cut(s) 1288
Psp5II RGGWCCY 1 cut(s) 1288
Psp6I CCWGG 1 cut(s) 963
PspFI CCCAGC 1 cut(s) 1336
PspGI CCWGG 1 cut(s) 963
PspN4I GGNNCC 4 cut(s) 100, 146, 813, 1289
PspPI GGNCC 2 cut(s) 1288, 1343
PspPPI RGGWCCY 1 cut(s) 1288
RsaI GTAC 5 cut(s) 74, 93, 418, 1170, 1284
RsaNI GTAC 5 cut(s) 73, 92, 417, 1169, 1283
RseI CAYNNNNRTG 3 cut(s) 464, 686, 797
SaqAI TTAA 7 cut(s) 48, 218, 312, 551, 777, 822, 950
SatI GCNGC 2 cut(s) 969, 1260
Sau3AI GATC 4 cut(s) 852, 922, 1060, 1099
Sau96I GGNCC 2 cut(s) 1288, 1343
ScrFI CCNGG 3 cut(s) 149, 965, 1342
SduI GDGCHC 1 cut(s) 977
SfaNI GCATC 5 cut(s) 338, 504, 712, 1094, 1354
SfcI CTRYAG 2 cut(s) 234, 1080
SfuI TTCGAA 1 cut(s) 379
SinI GGWCC 1 cut(s) 1288
SmiMI CAYNNNNRTG 3 cut(s) 464, 686, 797
SmlI CTYRAG 3 cut(s) 311, 659, 1034
SmoI CTYRAG 3 cut(s) 311, 659, 1034
SpeI ACTAGT 1 cut(s) 995
SphI GCATGC 1 cut(s) 469
SsiI CCGC 3 cut(s) 968, 971, 1203
SspI AATATT 1 cut(s) 245
SspMI CTAG 3 cut(s) 626, 996, 1196
StyD4I CCNGG 3 cut(s) 147, 963, 1340
StyI CCWWGG 1 cut(s) 1147
TaiI ACGT 1 cut(s) 426
TaqI TCGA 5 cut(s) 379, 512, 766, 851, 1362
TatI WGTACW 3 cut(s) 72, 91, 1168
TauI GCSGC 1 cut(s) 971
TfiI GAWTC 4 cut(s) 294, 305, 736, 1235
Tru1I TTAA 7 cut(s) 48, 218, 312, 551, 777, 822, 950
Tru9I TTAA 7 cut(s) 48, 218, 312, 551, 777, 822, 950
TscAI CASTG 2 cut(s) 879, 1353
TseFI GTSAC 1 cut(s) 1329
TseI GCWGC 1 cut(s) 1259
Tsp45I GTSAC 1 cut(s) 1329
TspDTI ATGAA 5 cut(s) 45, 210, 214, 285, 925
TspGWI ACGGA 1 cut(s) 1068
TspRI CASTG 2 cut(s) 879, 1353
Vha464I CTTAAG 1 cut(s) 311
VpaK11BI GGWCC 1 cut(s) 1288
XapI RAATTY 3 cut(s) 403, 578, 608
XceI RCATGY 1 cut(s) 469
XmnI GAANNNNTTC 1 cut(s) 353
XspI CTAG 3 cut(s) 626, 996, 1196
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.