RLG00000034579

Cyclic nucleotide-gated ion channel 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0000119
Physical Location & Seq
Forward (+)
45266283 .. 45270101
3819 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000034579

Sequence Viewer

Length: 1854 bp
ATGATGAGTAATTTGGAGAACCCGGAAGAGCTCATACATAACTCGAGAAATAACAATCTTAGAAGTCCAAGCTCCTTGTATGATGTCGTTAGGGAAGCTGCACCATCACACCAGAGAAAAACGAAAAGGACCGTGACTAAAGAACTTCTTGCAAATTTGAAATCACACCGGAGTATCATCCTTACAACTTCATGTGTGATTGCAGTCTTAGTGGATCCATTGTTCTTTTACCTTCCAATCATTGATGAGAAAGAGAAGTGCATTGGAATGGACACAATATTGAGGAATGTGGCACTTATTTTTCGATCACTCACCGATATCGGTTTCATAGTGAATATTATACATAAAATTCATGAAGCTGTGGAAAAAACAAGAGAAGATAGTCTTCAAAACATTAAAAAAAGGACTGTTGAAAAACTAAATCGAGATGAGAGAAACAAGTTTGCTAAGTCATTAGCTCATAACTTATCGTGGCACACTATCCTCATCGACTTTTTGGCTGTTCTTCCCATCCCCCAAGTGATAATAGTAGCTGTTAGAAGCTCTAGATGTTTGGATAAAAGAAAGATTCTAAACTTTCTACTTCTCATCCAGTATCTGCCAAGAGTTTATCGAATGCGTCATTCGTCTAAACAACTTAGACAAAAGACTGGAATATGGGTTAAAGGTTCATTCTATTTTTTCTTATACATCCTTGCGAGTCATGTACTTGGAGCCTTTTGGTATTATTTTTCTATTCAACAAGAGACATCTTGTTGGCACCGGGCGTGCAAAGAGCATGGTGGAGGAGTAAAATGTAATTTTTACTGCCATGAAAACATGACTCCGAGAGATTTGACATTCATCAACTCTATAGATAAATATTGCCTTGTAGATGTTCCGGCAAATGAAACTGCACCATTTGATTTTGGAATCTTTCTTGATTCCCTTAAGAATAATAACACGGCATCAATAAAATTTCAAAAGAAGTTTTTATACTCTTTTTGGTGGGGACTTCGAAATCTGAGGTATACATTTATTTCGATGAAAACTGCGAATTACGAGGAGAGAAGAAAAAAATTCAAATCAAAAGATATCGATATACAAATGTGGATGGAAAGAAATGGCCTCAAGAGAGATGTGATGAAAGACATCAGAGTATATACAAATAAAAAGTGGGAAGAAATACGAGATGCAGATATAGAGAATCTCTTCTCTATTCTTCCCGTGCAATCTCGAAAAGATCTTAAACATTCTCTTTGCATGGAAATGCTGAGCAAGGTGCCAAAGCTTAAAACTCTGAAAGATGAAGCTTTGACATCGATCTGCGATTGTCTGAAGCCAGCGGTGTATCAGGATAATAGCTTTGTTTTCCAAGAAGGAGAACCACTTGATCGCATTCTCTTCATTACAGAAGGCTTAATATGGACATACCAGGCGGCGGGCACTACTGATAGTAGTAGCACTAGTCAAAATGGAAAAGCAAAAACAGGTTTCAGTTTTCTTGAGAAAGGTGGATTTTACGGAGACGATCAACTTCTGAGTTGGGTAATAGCAGCATCACACAAGAATGATCTTTCCTTTACCAACCTTCCAATCTCGAAAGTGAATGTGAGATGCCATGCAAAAGTAGAAGGCTTTGTACTGATGGCCAAGGACTTGAAAACTGTAGTCTCCGCTAATTACAAAGTTTATTGGGGTTTCCACGAAAGAGAGGAGGGAGCAGTTCGAGCCATAAAGAAAGGACTGGCTCGTCGTTACAAAGCAGCAGATAGACCAAAAGGAAATCCAATGATGTCTCTCCCAGCCCCGCCACCGGCTACAATAGTTGATGCTGATGAGAACTCGCCAACAACATCAAGGAAGGATTTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
Ion_trans

Protein Analysis

618

Amino Acids

71.25

Weight (kDa)

9.44

Isoelectric Point (pI)

44.51

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000119)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g10570 FvH4_4g36390 FvH4_7g31840 FvH4_7g31840 FvH4_7g31850 FvH4_7g31850 FvH4_7g31861 FvH4_7g31861 FvH4_7g31950
malus_domestica MD01G1054600.v1.1 MD01G1221100.v1.1 MD01G1221400.v1.1 MD01G1221600.v1.1 MD01G1221800.v1.1 MD01G1222000.v1.1 MD01G1222100.v1.1 MD07G1140800.v1.1 MD07G1291200.v1.1 MD07G1291400.v1.1 MD07G1291500.v1.1 MD07G1291700.v1.1 MD07G1292500.v1.1 MD07G1292700.v1.1 MD07G1292800.v1.1 MD07G1292900.v1.1 MD08G1241600.v1.1 MD11G1083800.v1.1 MD15G1431600.v1.1
prunus_persica Prupe.1G017800_v2.0.a1 Prupe.1G017800_v2.0.a1 Prupe.1G162800_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312700_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G143000_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1
pyrus_communis pycom01g23050 pycom01g23070 pycom01g23090 pycom01g23100 pycom01g23110 pycom01g23120 pycom01g23170 pycom07g26410 pycom07g26440 pycom07g26470 pycom07g26480 pycom07g26490 pycom07g26500 pycom07g26510 pycom07g26530 pycom07g26540 pycom07g26570 pycom07g26580 pycom07g26590 pycom08g20940
rosa_chinensis RchiOBHm_Chr1g0324571 RchiOBHm_Chr1g0336181 RchiOBHm_Chr1g0381061 RchiOBHm_Chr1g0381091 RchiOBHm_Chr1g0381121 RchiOBHm_Chr1g0381131 RchiOBHm_Chr1g0381141 RchiOBHm_Chr1g0381161 RchiOBHm_Chr1g0381211 RchiOBHm_Chr2g0110361 RchiOBHm_Chr2g0120231 RchiOBHm_Chr3g0486281 RchiOBHm_Chr3g0486311 RchiOBHm_Chr3g0486401 RchiOBHm_Chr4g0409511 RchiOBHm_Chr4g0409521 RchiOBHm_Chr5g0017271 RchiOBHm_Chr5g0048781 RchiOBHm_Chr5g0048811
rosa_laevigata RLG00000002401 RLG00000008559 RLG00000017798 RLG00000017799 RLG00000023082 RLG00000023088 RLG00000026230 RLG00000026238 RLG00000026240 RLG00000026241 RLG00000026242 RLG00000026243 RLG00000026244 RLG00000026246 RLG00000026247 RLG00000026248 RLG00000029876 RLG00000030189 RLG00000034579
rosa_multiflora Rmu_co8101374.1_g000001 Rmu_co8309149.1_g000001 Rmu_co8450063.1_g000001 Rmu_sc0000441.1_g000094 Rmu_sc0000479.1_g000005 Rmu_sc0000647.1_g000006 Rmu_sc0001393.1_g000031 Rmu_sc0001423.1_g000037 Rmu_sc0001616.1_g000015 Rmu_sc0001857.1_g000011 Rmu_sc0002183.1_g000013 Rmu_sc0002183.1_g000028 Rmu_sc0002183.1_g000030 Rmu_sc0002688.1_g000003 Rmu_sc0002688.1_g000020 Rmu_sc0003801.1_g000003 Rmu_sc0003801.1_g000004 Rmu_sc0004125.1_g000006 Rmu_sc0004494.1_g000005 Rmu_sc0004494.1_g000006 Rmu_sc0004494.1_g000008 Rmu_sc0004494.1_g000009 Rmu_sc0005842.1_g000004 Rmu_sc0006872.1_g000001 Rmu_sc0006872.1_g000005 Rmu_sc0006872.1_g000009 Rmu_sc0006872.1_g000010 Rmu_sc0008053.1_g000026
rosa_roxburghii Rroxscaffold_159G00432960 Rroxscaffold_1G00033060 Rroxscaffold_2G00123150 Rroxscaffold_2G00123170 Rroxscaffold_2G00133500 Rroxscaffold_2G00133550 Rroxscaffold_4G00278650 Rroxscaffold_4G00278750 Rroxscaffold_4G00278790 Rroxscaffold_4G00278800 Rroxscaffold_4G00278810 Rroxscaffold_4G00325390 Rroxscaffold_5G00354010 Rroxscaffold_6G00395890 Rroxscaffold_6G00395900 Rroxscaffold_6G00395920
rosa_rugosa Rorug01G0046900.1 Rorug01G0427000 Rorug01G0427100 Rorug01G0427200 Rorug01G0427300 Rorug01G0427400 Rorug01G0427500 Rorug01G0427500 Rorug01G0427600 Rorug01G0427600 Rorug01G0427700 Rorug01G0427700 Rorug01G0427800 Rorug01G0428700 Rorug02G0166400 Rorug02G0166500 Rorug02G0166500 Rorug02G0166600 Rorug02G0166600 Rorug02G0166700 Rorug02G0167300 Rorug02G0167300 Rorug02G0167300 Rorug03G0224600 Rorug03G0224600 Rorug04G0094400 Rorug05G0241100 Rorug05G0241200
rosa_samantha Rh1BG407700 Rh1BG407900 Rh1BG409000 Rh1CG064700 Rh1CG420900 Rh1CG421000 Rh1CG421200 Rh1CG421300 Rh1CG421800 Rh1CG421900 Rh1CG422000 Rh1CG422200 Rh1CG422300 Rh1CG423600 Rh1DG437600 Rh1DG438900 Rh1DG439000 Rh1DG440300 Rh2AG219100 Rh2CG220700 Rh2DG225300 Rh3AG274400 Rh3AG274600 Rh3CG308900 Rh3DG305800 Rh4AG156400 Rh5AG129000 Rh5AG320900 Rh5CG139600
rosa_wichuraiana Rw1G005300 Rw1G039280 Rw1G039300 Rw1G039310 Rw1G039320 Rw1G039330 Rw1G039340 Rw1G039360 Rw1G039390 Rw2G016910 Rw2G022800 Rw3G024330 Rw3G024340 Rw3G024350 Rw3G024400 Rw4G012810 Rw5G030120 Rw5G030280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1731
AccB1I GGYRCC 2 cut(s) 759, 1261
AccI GTMKAC 1 cut(s) 1010
AciI CCGC 5 cut(s) 1325, 1418, 1421, 1656, 1790
AclWI GGATC 2 cut(s) 209, 222
AcoI YGGCCR 1 cut(s) 1629
AcsI RAATTY 4 cut(s) 154, 348, 956, 1058
AcuI CTGAAG 1 cut(s) 1337
AfaI GTAC 2 cut(s) 708, 1623
AfiI CCNNNNNNNGG 2 cut(s) 1420, 1795
AflII CTTAAG 1 cut(s) 929
AgsI TTSAA 7 cut(s) 160, 389, 413, 740, 962, 1063, 1642
AhlI ACTAGT 1 cut(s) 1445
AjnI CCWGG 1 cut(s) 1413
AloI GAACNNNNNNTCC 2 cut(s) 206, 238
Alw21I GWGCWC 1 cut(s) 33
Alw26I GTCTC 4 cut(s) 740, 1500, 1657, 1782
AlwI GGATC 2 cut(s) 209, 222
AlwNI CAGNNNCTG 1 cut(s) 598
Ama87I CYCGRG 1 cut(s) 43
AoxI GGCC 2 cut(s) 1105, 1629
ApeKI GCWGC 3 cut(s) 98, 1535, 1745
ApoI RAATTY 4 cut(s) 154, 348, 956, 1058
Asp700I GAANNNNTTC 1 cut(s) 1190
AspS9I GGNCC 1 cut(s) 129
AsuC2I CCSGG 2 cut(s) 23, 764
AsuHPI GGTGA 1 cut(s) 304
AsuII TTCGAA 1 cut(s) 997
AvaI CYCGRG 1 cut(s) 43
AvaII GGWCC 1 cut(s) 129
BaeGI GKGCMC 1 cut(s) 1427
BaeI ACNNNNGTAYC 2 cut(s) 157, 190
BalI TGGCCA 1 cut(s) 1631
BamHI GGATCC 1 cut(s) 214
BanI GGYRCC 2 cut(s) 759, 1261
BanII GRGCYC 1 cut(s) 33
BarI GAAGNNNNNNTAC 6 cut(s) 18, 50, 959, 991, 1605, 1637
BbsI GAAGAC 1 cut(s) 377
Bbv12I GWGCWC 1 cut(s) 33
BbvI GCAGC 3 cut(s) 85, 1547, 1757
BccI CCATC 4 cut(s) 112, 518, 1087, 1621
BceAI ACGGC 1 cut(s) 960
BciT130I CCWGG 1 cut(s) 1415
BcnI CCSGG 2 cut(s) 23, 764
BcoDI GTCTC 4 cut(s) 740, 1500, 1657, 1782
BcuI ACTAGT 1 cut(s) 1445
BfaI CTAG 2 cut(s) 546, 1446
BfmI CTRYAG 2 cut(s) 852, 1647
BfrI CTTAAG 1 cut(s) 929
BglII AGATCT 1 cut(s) 1222
BisI GCNGC 4 cut(s) 99, 1419, 1536, 1746
BlpI GCTNAGC 1 cut(s) 1253
BlsI GCNGC 4 cut(s) 100, 1420, 1537, 1747
Bme1390I CCNGG 3 cut(s) 23, 764, 1415
Bme18I GGWCC 1 cut(s) 129
BmeT110I CYCGRG 1 cut(s) 43
BmgT120I GGNCC 1 cut(s) 129
BmiI GGNNCC 4 cut(s) 216, 715, 761, 1263
BmrFI CCNGG 3 cut(s) 23, 764, 1415
BmsI GCATC 5 cut(s) 956, 1162, 1547, 1586, 1801
BpiI GAAGAC 1 cut(s) 377
Bpu1102I GCTNAGC 1 cut(s) 1253
Bpu14I TTCGAA 1 cut(s) 997
BpuEI CTTGAG 2 cut(s) 1094, 1505
BpuMI CCSGG 2 cut(s) 23, 764
Bsa29I ATCGAT 2 cut(s) 1077, 1301
BsaJI CCNNGG 1 cut(s) 1632
BsaWI WCCGGW 1 cut(s) 168
Bsc4I CCNNNNNNNGG 2 cut(s) 1420, 1795
Bse118I RCCGGY 1 cut(s) 1795
Bse1I ACTGG 3 cut(s) 592, 655, 1731
BseBI CCWGG 1 cut(s) 1415
BseCI ATCGAT 2 cut(s) 1077, 1301
BseDI CCNNGG 1 cut(s) 1632
BseGI GGATG 5 cut(s) 177, 510, 588, 690, 1098
BseLI CCNNNNNNNGG 2 cut(s) 1420, 1795
BseMII CTCAG 3 cut(s) 995, 1244, 1511
BseNI ACTGG 3 cut(s) 592, 655, 1731
BseRI GAGGAG 3 cut(s) 801, 1058, 1709
BseSI GKGCMC 1 cut(s) 1427
BseXI GCAGC 3 cut(s) 85, 1547, 1757
BseYI CCCAGC 1 cut(s) 1783
BsgI GTGCAG 2 cut(s) 84, 879
BshFI GGCC 2 cut(s) 1107, 1631
BshNI GGYRCC 2 cut(s) 759, 1261
BshVI ATCGAT 2 cut(s) 1077, 1301
BsiHKAI GWGCWC 1 cut(s) 33
BsiHKCI CYCGRG 1 cut(s) 43
BsiSI CCGG 5 cut(s) 23, 169, 763, 881, 1796
BslFI GGGAC 1 cut(s) 1005
BslI CCNNNNNNNGG 2 cut(s) 1420, 1795
BsmAI GTCTC 4 cut(s) 740, 1500, 1657, 1782
BsmBI CGTCTC 1 cut(s) 1500
BsmFI GGGAC 1 cut(s) 1005
BsmI GAATGC 2 cut(s) 621, 1377
BsnI GGCC 2 cut(s) 1107, 1631
BsoBI CYCGRG 1 cut(s) 43
Bsp119I TTCGAA 1 cut(s) 997
Bsp1286I GDGCHC 2 cut(s) 33, 1427
Bsp143I GATC 7 cut(s) 214, 305, 1222, 1302, 1372, 1510, 1552
Bsp1720I GCTNAGC 1 cut(s) 1253
BspACI CCGC 5 cut(s) 1325, 1418, 1421, 1656, 1790
BspANI GGCC 2 cut(s) 1107, 1631
BspCNI CTCAG 3 cut(s) 996, 1245, 1512
BspDI ATCGAT 2 cut(s) 1077, 1301
BspHI TCATGA 1 cut(s) 352
BspLI GGNNCC 4 cut(s) 216, 715, 761, 1263
BspPI GGATC 2 cut(s) 209, 222
BspQI GCTCTTC 1 cut(s) 21
BspT104I TTCGAA 1 cut(s) 997
BspT107I GGYRCC 2 cut(s) 759, 1261
BspTI CTTAAG 1 cut(s) 929
BsrFI RCCGGY 1 cut(s) 1795
BsrI ACTGG 3 cut(s) 592, 655, 1731
BssAI RCCGGY 1 cut(s) 1795
BssECI CCNNGG 1 cut(s) 1632
BssMI GATC 7 cut(s) 214, 305, 1222, 1302, 1372, 1510, 1552
BssNAI GTATAC 1 cut(s) 1011
BssT1I CCWWGG 1 cut(s) 1632
Bst1107I GTATAC 1 cut(s) 1011
Bst2UI CCWGG 1 cut(s) 1415
Bst4CI ACNGT 3 cut(s) 133, 409, 1648
Bst6I CTCTTC 3 cut(s) 21, 1196, 1388
BstAFI CTTAAG 1 cut(s) 929
BstBI TTCGAA 1 cut(s) 997
BstC8I GCNNGC 3 cut(s) 769, 1323, 1423
BstDEI CTNAG 7 cut(s) 59, 208, 447, 638, 1004, 1253, 1520
BstF5I GGATG 5 cut(s) 177, 510, 588, 690, 1098
BstKTI GATC 7 cut(s) 217, 308, 1225, 1305, 1375, 1513, 1555
BstMAI GTCTC 4 cut(s) 740, 1500, 1657, 1782
BstMBI GATC 7 cut(s) 214, 305, 1222, 1302, 1372, 1510, 1552
BstMWI GCNNNNNNNGC 1 cut(s) 1709
BstNI CCWGG 1 cut(s) 1415
BstSCI CCNGG 3 cut(s) 21, 762, 1413
BstSFI CTRYAG 2 cut(s) 852, 1647
BstSLI GKGCMC 1 cut(s) 1427
BstV1I GCAGC 3 cut(s) 85, 1547, 1757
BstV2I GAAGAC 1 cut(s) 377
BstX2I RGATCY 2 cut(s) 214, 1222
BstYI RGATCY 2 cut(s) 214, 1222
BstZ17I GTATAC 1 cut(s) 1011
Bsu15I ATCGAT 2 cut(s) 1077, 1301
BsuRI GGCC 2 cut(s) 1107, 1631
BsuTUI ATCGAT 2 cut(s) 1077, 1301
BtsCI GGATG 5 cut(s) 177, 510, 588, 690, 1098
Cac8I GCNNGC 3 cut(s) 769, 1323, 1423
CaiI CAGNNNCTG 1 cut(s) 598
CciI TCATGA 1 cut(s) 352
Cfr10I RCCGGY 1 cut(s) 1795
Cfr13I GGNCC 1 cut(s) 129
ClaI ATCGAT 2 cut(s) 1077, 1301
CseI GACGC 1 cut(s) 608
Csp6I GTAC 2 cut(s) 707, 1622
CviAII CATG 8 cut(s) 192, 353, 704, 779, 812, 820, 1243, 1601
CviQI GTAC 2 cut(s) 707, 1622
DdeI CTNAG 7 cut(s) 59, 208, 447, 638, 1004, 1253, 1520
DpnI GATC 7 cut(s) 216, 307, 1224, 1304, 1374, 1512, 1554
DpnII GATC 7 cut(s) 214, 305, 1222, 1302, 1372, 1510, 1552
DrdI GACNNNNNNGTC 1 cut(s) 1731
DseDI GACNNNNNNGTC 1 cut(s) 1731
EaeI YGGCCR 1 cut(s) 1629
Eam1104I CTCTTC 3 cut(s) 21, 1196, 1388
EarI CTCTTC 3 cut(s) 21, 1196, 1388
Ecl136II GAGCTC 1 cut(s) 31
Eco130I CCWWGG 1 cut(s) 1632
Eco24I GRGCYC 1 cut(s) 33
Eco32I GATATC 2 cut(s) 319, 1075
Eco47I GGWCC 1 cut(s) 129
Eco53kI GAGCTC 1 cut(s) 31
Eco57I CTGAAG 1 cut(s) 1337
Eco88I CYCGRG 1 cut(s) 43
EcoICRI GAGCTC 1 cut(s) 31
EcoRII CCWGG 1 cut(s) 1413
EcoRV GATATC 2 cut(s) 319, 1075
EcoT14I CCWWGG 1 cut(s) 1632
EcoT38I GRGCYC 1 cut(s) 33
ErhI CCWWGG 1 cut(s) 1632
Esp3I CGTCTC 1 cut(s) 1500
FaeI CATG 8 cut(s) 195, 356, 707, 782, 815, 823, 1246, 1604
FalI AAGNNNNNCTT 4 cut(s) 132, 164, 369, 401
FaqI GGGAC 1 cut(s) 1005
FatI CATG 8 cut(s) 191, 352, 703, 778, 811, 819, 1242, 1600
FauI CCCGC 2 cut(s) 1414, 1797
FblI GTMKAC 1 cut(s) 1010
Fnu4HI GCNGC 4 cut(s) 99, 1419, 1536, 1746
FokI GGATG 5 cut(s) 164, 497, 575, 677, 1105
FriOI GRGCYC 1 cut(s) 33
Fsp4HI GCNGC 4 cut(s) 99, 1419, 1536, 1746
FspBI CTAG 2 cut(s) 546, 1446
GluI GCNGC 4 cut(s) 99, 1419, 1536, 1746
GsaI CCCAGC 1 cut(s) 1787
HaeIII GGCC 2 cut(s) 1107, 1631
HapII CCGG 5 cut(s) 23, 169, 763, 881, 1796
HgaI GACGC 1 cut(s) 608
Hin1II CATG 8 cut(s) 195, 356, 707, 782, 815, 823, 1246, 1604
HindIII AAGCTT 2 cut(s) 1268, 1290
HinfI GANTC 6 cut(s) 568, 700, 823, 912, 923, 1186
HpaII CCGG 5 cut(s) 23, 169, 763, 881, 1796
HphI GGTGA 1 cut(s) 304
Hpy166II GTNNAC 1 cut(s) 1011
Hpy188I TCNGA 6 cut(s) 828, 1005, 1136, 1281, 1317, 1521
Hpy8I GTNNAC 1 cut(s) 1011
Hpy99I CGWCG 1 cut(s) 1737
HpyAV CCTTC 6 cut(s) 242, 1352, 1388, 1580, 1607, 1837
HpyCH4III ACNGT 3 cut(s) 133, 409, 1648
HpyF10VI GCNNNNNNNGC 1 cut(s) 1709
HpyF3I CTNAG 7 cut(s) 59, 208, 447, 638, 1004, 1253, 1520
Hsp92II CATG 8 cut(s) 195, 356, 707, 782, 815, 823, 1246, 1604
Kzo9I GATC 7 cut(s) 214, 305, 1222, 1302, 1372, 1510, 1552
LguI GCTCTTC 1 cut(s) 21
LmnI GCTCC 3 cut(s) 77, 713, 1700
Lsp1109I GCAGC 3 cut(s) 85, 1547, 1757
LweI GCATC 5 cut(s) 956, 1162, 1547, 1586, 1801
MaeI CTAG 2 cut(s) 546, 1446
MaeIII GTNAC 2 cut(s) 133, 1736
MalI GATC 7 cut(s) 216, 307, 1224, 1304, 1374, 1512, 1554
MboI GATC 7 cut(s) 214, 305, 1222, 1302, 1372, 1510, 1552
MboII GAAGA 9 cut(s) 38, 377, 389, 497, 1062, 1172, 1183, 1193, 1375
MflI RGATCY 2 cut(s) 214, 1222
MhlI GDGCHC 2 cut(s) 33, 1427
MlsI TGGCCA 1 cut(s) 1631
MluCI AATT 8 cut(s) 10, 154, 348, 799, 956, 1036, 1058, 1660
MluNI TGGCCA 1 cut(s) 1631
MlyI GAGTC 2 cut(s) 709, 817
MnlI CCTC 8 cut(s) 276, 494, 779, 999, 1036, 1118, 1687, 1690
Mox20I TGGCCA 1 cut(s) 1631
MroXI GAANNNNTTC 1 cut(s) 1190
MscI TGGCCA 1 cut(s) 1631
MseI TTAA 6 cut(s) 396, 663, 930, 1227, 1272, 1400
MslI CAYNNNNRTG 3 cut(s) 266, 1247, 1548
Msp20I TGGCCA 1 cut(s) 1631
MspA1I CMGCKG 1 cut(s) 1325
MspCI CTTAAG 1 cut(s) 929
MspI CCGG 5 cut(s) 23, 169, 763, 881, 1796
MspR9I CCNGG 3 cut(s) 23, 764, 1415
Mva1269I GAATGC 2 cut(s) 621, 1377
MvaI CCWGG 1 cut(s) 1415
MwoI GCNNNNNNNGC 1 cut(s) 1709
NciI CCSGG 2 cut(s) 23, 764
NdeII GATC 7 cut(s) 214, 305, 1222, 1302, 1372, 1510, 1552
NlaIII CATG 8 cut(s) 195, 356, 707, 782, 815, 823, 1246, 1604
NlaIV GGNNCC 4 cut(s) 216, 715, 761, 1263
NmuCI GTSAC 1 cut(s) 133
NspV TTCGAA 1 cut(s) 997
PaeR7I CTCGAG 1 cut(s) 43
PagI TCATGA 1 cut(s) 352
PciSI GCTCTTC 1 cut(s) 21
PctI GAATGC 2 cut(s) 621, 1377
PdmI GAANNNNTTC 1 cut(s) 1190
PfeI GAWTC 4 cut(s) 568, 912, 923, 1186
PkrI GCNGC 4 cut(s) 100, 1420, 1537, 1747
PleI GAGTC 2 cut(s) 708, 817
PpsI GAGTC 2 cut(s) 708, 817
Psp124BI GAGCTC 1 cut(s) 33
Psp6I CCWGG 1 cut(s) 1413
PspFI CCCAGC 1 cut(s) 1783
PspGI CCWGG 1 cut(s) 1413
PspN4I GGNNCC 4 cut(s) 216, 715, 761, 1263
PspPI GGNCC 1 cut(s) 129
PstNI CAGNNNCTG 1 cut(s) 598
PsuI RGATCY 2 cut(s) 214, 1222
RsaI GTAC 2 cut(s) 708, 1623
RsaNI GTAC 2 cut(s) 707, 1622
RseI CAYNNNNRTG 3 cut(s) 266, 1247, 1548
SacI GAGCTC 1 cut(s) 33
SapI GCTCTTC 1 cut(s) 21
SaqAI TTAA 6 cut(s) 396, 663, 930, 1227, 1272, 1400
SatI GCNGC 4 cut(s) 99, 1419, 1536, 1746
Sau3AI GATC 7 cut(s) 214, 305, 1222, 1302, 1372, 1510, 1552
Sau96I GGNCC 1 cut(s) 129
SchI GAGTC 2 cut(s) 709, 817
ScrFI CCNGG 3 cut(s) 23, 764, 1415
SduI GDGCHC 2 cut(s) 33, 1427
SfaNI GCATC 5 cut(s) 956, 1162, 1547, 1586, 1801
SfcI CTRYAG 2 cut(s) 852, 1647
Sfr274I CTCGAG 1 cut(s) 43
SfuI TTCGAA 1 cut(s) 997
SinI GGWCC 1 cut(s) 129
SlaI CTCGAG 1 cut(s) 43
SmiMI CAYNNNNRTG 3 cut(s) 266, 1247, 1548
SmlI CTYRAG 4 cut(s) 43, 929, 1109, 1484
SmoI CTYRAG 4 cut(s) 43, 929, 1109, 1484
SpeI ACTAGT 1 cut(s) 1445
Sse9I AATT 8 cut(s) 10, 154, 348, 799, 956, 1036, 1058, 1660
SsiI CCGC 5 cut(s) 1325, 1418, 1421, 1656, 1790
SspI AATATT 3 cut(s) 279, 337, 863
SspMI CTAG 2 cut(s) 546, 1446
SstI GAGCTC 1 cut(s) 33
StyD4I CCNGG 3 cut(s) 21, 762, 1413
StyI CCWWGG 1 cut(s) 1632
TaaI ACNGT 3 cut(s) 133, 409, 1648
TasI AATT 8 cut(s) 10, 154, 348, 799, 956, 1036, 1058, 1660
TatI WGTACW 2 cut(s) 706, 1621
TauI GCSGC 1 cut(s) 1421
TfiI GAWTC 4 cut(s) 568, 912, 923, 1186
Tru1I TTAA 6 cut(s) 396, 663, 930, 1227, 1272, 1400
Tru9I TTAA 6 cut(s) 396, 663, 930, 1227, 1272, 1400
TseFI GTSAC 1 cut(s) 133
TseI GCWGC 3 cut(s) 98, 1535, 1745
Tsp45I GTSAC 1 cut(s) 133
TspGWI ACGGA 1 cut(s) 1518
Vha464I CTTAAG 1 cut(s) 929
VpaK11BI GGWCC 1 cut(s) 129
XapI RAATTY 4 cut(s) 154, 348, 956, 1058
XbaI TCTAGA 1 cut(s) 545
XhoI CTCGAG 1 cut(s) 43
XmiI GTMKAC 1 cut(s) 1010
XmnI GAANNNNTTC 1 cut(s) 1190
XspI CTAG 2 cut(s) 546, 1446
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.