RchiOBHm_Chr3g0486401

Cyclic nucleotide-gated ion channel 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
OG0000119
Physical Location & Seq
Reverse (-)
33305038 .. 33308595
3558 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ45092

Sequence Viewer

Length: 1722 bp
ATGTTCATAATTGCATGTGTGATTGCAGTCTCATTAGACCCATTGTTCTTGTACATTCCAATCATAGATGAAGAAGAAAAGTGCCTTTCAGAAGACAAAGAGTTGAGGACTATAGCTCTCATTTTGCGATCGCTTACTGATGTCACTTTCGTAGTGAATATCATATATCATGTTTGCAAAGCCATTAACGCTGCCTACAAAGAACACAAAGGAAAAAAGTCTGAATTGGCAGCGGTGATAATTCCATTTGCTAAATTTGTTGCTGGGAAGCTAGCATGGCGCTCTACGCTAACCAGCATTTTAGCTGTTTTTCCCATGCCACAACTGCTTCTAGTATTTGTCTTCTTCAAAATGAGAGGCCATGGATACTTGCAAGGTAGAAAGATTCTGAATGGCTTTCTTCTAGCTCAATATCTACCAAGGATCTATCGAATTTACCTATCATCTCAGAAACTCAGACAAACTACTGGAATATGGGCTAAAGCTCTGTTTAACTTTTTTCTATATATCCTTGCAAGTCATTTTGAGTTTTGGGTCACTTTTTGGTCGCATATCCACATCTCGACCGTTCAGTTTTTAGGTCCTTGGAGCTTTTTGGTATTTTTTTCTATTCAACGAGAAACTTCTTGTTGGCATTGGGCATGCGTATTTAATAGTACAGATGTTGAAGAATGTATGAGTACCTTATACTGCGAGGTTCACAATACTGCTGCAAGAAATGTCACATTCCTTAATCAATTTTGCTGTATAAGTGCTGAAGAGAATGCTAAGGCCCCTTCTGATTTTGGAATATTTTTGGATTCCCTCAAAAATGGTATCACAGGGAATATACCTTTCGGAAAGAAGTTATCTTACTCTTTTTGGTGGGGATTACGTAATCTAAGTAATTTTGGCACAAATCTCGAAACAAGCACCTATGTGTGGGAAAATTGCTTTGCAGTTTTTATTTCTGTCATTGGCTTGCTACTATTTCTATATCTCCTTGGAAATGTACAGATATTTATGTCCATGGAAATTCAAAGACGGGAAACTCAAAGATGGGAAACTCAAAGACGGGAGGATGAAAGAAACAAGATACAATTGAAAGAGAAGTATTCAGGATGGATGGACAGAAATGAGCTTCCAGACGATTTGAAGAAAAAAATTATGAAGAACATAGAGCAAAAACTGGAAGAGAACAAAGATACTGATCCTAAGAATCTAATCTCTATTCTTCCGACGCATACCCAAACGTGTCTAAAGCGTTTCCTGGGCTTGAAACTGCTAAAGAAAGTACCGAAGCTTGCAAGGATGGATAAACGTGTGTTGAAAATGTTATGTGGCTATCTAAAGCCAGTGATGCATGACAAGGGCACCGAGGTTTTACAAATGGGAGATCCACTACATAGCATGCTACTCATTACAGAAGGCACATTATTGACCTGCAGAACTACCAAGTATGATTGTCATGTTGCAACTGAAAATGCAAAAACAGGTAGTAGTTCAAGTTCCCCGTCAGTGGGCACCCTTGACAAAGGTGACTTTTACGGTGCCGAAGAACTGATCGAGTGGGTAACACAAAACAAGGATTTAGACCAGCTTCCCGCCTCTTCCTTCAATGTGAAATGCGATTCGAAAGTAGAAGGCTTTGTTCTCAAGGCCAAGCACTTGAGAAGTGTAGTATCCAAAAACGAAAAACGGTGGAAAATTGGCATTAGCAAGTCAGACCACAGCATATACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
Ion_trans

Protein Analysis

573

Amino Acids

65.96

Weight (kDa)

9.03

Isoelectric Point (pI)

44.13

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000119)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g10570 FvH4_4g36390 FvH4_7g31840 FvH4_7g31840 FvH4_7g31850 FvH4_7g31850 FvH4_7g31861 FvH4_7g31861 FvH4_7g31950
malus_domestica MD01G1054600.v1.1 MD01G1221100.v1.1 MD01G1221400.v1.1 MD01G1221600.v1.1 MD01G1221800.v1.1 MD01G1222000.v1.1 MD01G1222100.v1.1 MD07G1140800.v1.1 MD07G1291200.v1.1 MD07G1291400.v1.1 MD07G1291500.v1.1 MD07G1291700.v1.1 MD07G1292500.v1.1 MD07G1292700.v1.1 MD07G1292800.v1.1 MD07G1292900.v1.1 MD08G1241600.v1.1 MD11G1083800.v1.1 MD15G1431600.v1.1
prunus_persica Prupe.1G017800_v2.0.a1 Prupe.1G017800_v2.0.a1 Prupe.1G162800_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312700_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G143000_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1
pyrus_communis pycom01g23050 pycom01g23070 pycom01g23090 pycom01g23100 pycom01g23110 pycom01g23120 pycom01g23170 pycom07g26410 pycom07g26440 pycom07g26470 pycom07g26480 pycom07g26490 pycom07g26500 pycom07g26510 pycom07g26530 pycom07g26540 pycom07g26570 pycom07g26580 pycom07g26590 pycom08g20940
rosa_chinensis RchiOBHm_Chr1g0324571 RchiOBHm_Chr1g0336181 RchiOBHm_Chr1g0381061 RchiOBHm_Chr1g0381091 RchiOBHm_Chr1g0381121 RchiOBHm_Chr1g0381131 RchiOBHm_Chr1g0381141 RchiOBHm_Chr1g0381161 RchiOBHm_Chr1g0381211 RchiOBHm_Chr2g0110361 RchiOBHm_Chr2g0120231 RchiOBHm_Chr3g0486281 RchiOBHm_Chr3g0486311 RchiOBHm_Chr3g0486401 RchiOBHm_Chr4g0409511 RchiOBHm_Chr4g0409521 RchiOBHm_Chr5g0017271 RchiOBHm_Chr5g0048781 RchiOBHm_Chr5g0048811
rosa_laevigata RLG00000002401 RLG00000008559 RLG00000017798 RLG00000017799 RLG00000023082 RLG00000023088 RLG00000026230 RLG00000026238 RLG00000026240 RLG00000026241 RLG00000026242 RLG00000026243 RLG00000026244 RLG00000026246 RLG00000026247 RLG00000026248 RLG00000029876 RLG00000030189 RLG00000034579
rosa_multiflora Rmu_co8101374.1_g000001 Rmu_co8309149.1_g000001 Rmu_co8450063.1_g000001 Rmu_sc0000441.1_g000094 Rmu_sc0000479.1_g000005 Rmu_sc0000647.1_g000006 Rmu_sc0001393.1_g000031 Rmu_sc0001423.1_g000037 Rmu_sc0001616.1_g000015 Rmu_sc0001857.1_g000011 Rmu_sc0002183.1_g000013 Rmu_sc0002183.1_g000028 Rmu_sc0002183.1_g000030 Rmu_sc0002688.1_g000003 Rmu_sc0002688.1_g000020 Rmu_sc0003801.1_g000003 Rmu_sc0003801.1_g000004 Rmu_sc0004125.1_g000006 Rmu_sc0004494.1_g000005 Rmu_sc0004494.1_g000006 Rmu_sc0004494.1_g000008 Rmu_sc0004494.1_g000009 Rmu_sc0005842.1_g000004 Rmu_sc0006872.1_g000001 Rmu_sc0006872.1_g000005 Rmu_sc0006872.1_g000009 Rmu_sc0006872.1_g000010 Rmu_sc0008053.1_g000026
rosa_roxburghii Rroxscaffold_159G00432960 Rroxscaffold_1G00033060 Rroxscaffold_2G00123150 Rroxscaffold_2G00123170 Rroxscaffold_2G00133500 Rroxscaffold_2G00133550 Rroxscaffold_4G00278650 Rroxscaffold_4G00278750 Rroxscaffold_4G00278790 Rroxscaffold_4G00278800 Rroxscaffold_4G00278810 Rroxscaffold_4G00325390 Rroxscaffold_5G00354010 Rroxscaffold_6G00395890 Rroxscaffold_6G00395900 Rroxscaffold_6G00395920
rosa_rugosa Rorug01G0046900.1 Rorug01G0427000 Rorug01G0427100 Rorug01G0427200 Rorug01G0427300 Rorug01G0427400 Rorug01G0427500 Rorug01G0427500 Rorug01G0427600 Rorug01G0427600 Rorug01G0427700 Rorug01G0427700 Rorug01G0427800 Rorug01G0428700 Rorug02G0166400 Rorug02G0166500 Rorug02G0166500 Rorug02G0166600 Rorug02G0166600 Rorug02G0166700 Rorug02G0167300 Rorug02G0167300 Rorug02G0167300 Rorug03G0224600 Rorug03G0224600 Rorug04G0094400 Rorug05G0241100 Rorug05G0241200
rosa_samantha Rh1BG407700 Rh1BG407900 Rh1BG409000 Rh1CG064700 Rh1CG420900 Rh1CG421000 Rh1CG421200 Rh1CG421300 Rh1CG421800 Rh1CG421900 Rh1CG422000 Rh1CG422200 Rh1CG422300 Rh1CG423600 Rh1DG437600 Rh1DG438900 Rh1DG439000 Rh1DG440300 Rh2AG219100 Rh2CG220700 Rh2DG225300 Rh3AG274400 Rh3AG274600 Rh3CG308900 Rh3DG305800 Rh4AG156400 Rh5AG129000 Rh5AG320900 Rh5CG139600
rosa_wichuraiana Rw1G005300 Rw1G039280 Rw1G039300 Rw1G039310 Rw1G039320 Rw1G039330 Rw1G039340 Rw1G039360 Rw1G039390 Rw2G016910 Rw2G022800 Rw3G024330 Rw3G024340 Rw3G024350 Rw3G024400 Rw4G012810 Rw5G030120 Rw5G030280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1430
AccB1I GGYRCC 3 cut(s) 1352, 1502, 1529
AciI CCGC 2 cut(s) 233, 1584
AclWI GGATC 3 cut(s) 431, 1184, 1370
AcsI RAATTY 3 cut(s) 254, 432, 1014
AcuI CTGAAG 1 cut(s) 777
AfaI GTAC 5 cut(s) 53, 658, 682, 993, 1275
AfiI CCNNNNNNNGG 3 cut(s) 921, 1498, 1499
AflIII ACRYGT 2 cut(s) 1232, 1300
AjnI CCWGG 1 cut(s) 1248
AleI CACNNNNGTG 1 cut(s) 917
AluBI AGCT 9 cut(s) 116, 271, 305, 407, 485, 591, 1120, 1282, 1579
AluI AGCT 9 cut(s) 116, 271, 305, 407, 485, 591, 1120, 1282, 1579
Alw26I GTCTC 1 cut(s) 34
AlwI GGATC 3 cut(s) 431, 1184, 1370
AoxI GGCC 3 cut(s) 358, 771, 1638
ApeKI GCWGC 3 cut(s) 191, 230, 710
ApoI RAATTY 3 cut(s) 254, 432, 1014
AsiSI GCGATCGC 1 cut(s) 131
AspLEI GCGC 1 cut(s) 282
AspS9I GGNCC 2 cut(s) 581, 772
AsuHPI GGTGA 2 cut(s) 247, 1529
AsuII TTCGAA 1 cut(s) 1613
AsuNHI GCTAGC 1 cut(s) 271
AvaII GGWCC 1 cut(s) 581
BaeGI GKGCMC 2 cut(s) 1355, 1505
BanI GGYRCC 3 cut(s) 1352, 1502, 1529
BarI GAAGNNNNNNTAC 2 cut(s) 836, 868
BbsI GAAGAC 2 cut(s) 99, 334
BbvI GCAGC 3 cut(s) 178, 242, 697
BccI CCATC 4 cut(s) 1032, 1095, 1099, 1285
BcgI CGANNNNNNTGC 2 cut(s) 883, 917
BciT130I CCWGG 1 cut(s) 1250
BciVI GTATCC 2 cut(s) 359, 1672
BcoDI GTCTC 1 cut(s) 34
BfaI CTAG 4 cut(s) 272, 332, 404, 1720
BfmI CTRYAG 2 cut(s) 111, 1423
BfoI RGCGCY 1 cut(s) 283
BfuAI ACCTGC 1 cut(s) 1430
BfuI GTATCC 2 cut(s) 359, 1672
BisI GCNGC 3 cut(s) 192, 231, 711
BlsI GCNGC 3 cut(s) 193, 232, 712
Bme1390I CCNGG 1 cut(s) 1250
Bme18I GGWCC 1 cut(s) 581
BmgT120I GGNCC 2 cut(s) 581, 772
BmiI GGNNCC 4 cut(s) 774, 1354, 1504, 1531
BmrFI CCNGG 1 cut(s) 1250
BmsI GCATC 1 cut(s) 1329
BmtI GCTAGC 1 cut(s) 275
BpiI GAAGAC 2 cut(s) 99, 334
Bpu10I CCTNAGC 1 cut(s) 768
Bpu14I TTCGAA 1 cut(s) 1613
BpuEI CTTGAG 2 cut(s) 1619, 1669
BsaAI YACGTR 1 cut(s) 875
BsaBI GATNNNNATC 1 cut(s) 1188
BsaJI CCNNGG 7 cut(s) 361, 419, 584, 982, 1008, 1249, 1356
Bsc4I CCNNNNNNNGG 3 cut(s) 921, 1498, 1499
Bse1I ACTGG 3 cut(s) 472, 1173, 1334
Bse8I GATNNNNATC 1 cut(s) 1188
BseBI CCWGG 1 cut(s) 1250
BseDI CCNNGG 7 cut(s) 361, 419, 584, 982, 1008, 1249, 1356
BseGI GGATG 4 cut(s) 1066, 1106, 1110, 1296
BseJI GATNNNNATC 1 cut(s) 1188
BseLI CCNNNNNNNGG 3 cut(s) 921, 1498, 1499
BseMII CTCAG 2 cut(s) 461, 469
BseNI ACTGG 3 cut(s) 472, 1173, 1334
BseSI GKGCMC 2 cut(s) 1355, 1505
BseXI GCAGC 3 cut(s) 178, 242, 697
BseYI CCCAGC 1 cut(s) 263
Bsh1285I CGRYCG 2 cut(s) 131, 567
BshFI GGCC 3 cut(s) 360, 773, 1640
BshNI GGYRCC 3 cut(s) 1352, 1502, 1529
BsiEI CGRYCG 2 cut(s) 131, 567
BslI CCNNNNNNNGG 3 cut(s) 921, 1498, 1499
BsmAI GTCTC 1 cut(s) 34
BsmI GAATGC 1 cut(s) 769
BsnI GGCC 3 cut(s) 360, 773, 1640
Bsp119I TTCGAA 1 cut(s) 1613
Bsp1286I GDGCHC 2 cut(s) 1355, 1505
Bsp1407I TGTACA 2 cut(s) 51, 991
Bsp143I GATC 5 cut(s) 128, 423, 1189, 1375, 1542
Bsp19I CCATGG 2 cut(s) 361, 1008
BspACI CCGC 2 cut(s) 233, 1584
BspANI GGCC 3 cut(s) 360, 773, 1640
BspCNI CTCAG 2 cut(s) 460, 468
BspLI GGNNCC 4 cut(s) 774, 1354, 1504, 1531
BspMAI CTGCAG 1 cut(s) 1427
BspMI ACCTGC 1 cut(s) 1430
BspOI GCTAGC 1 cut(s) 275
BspPI GGATC 3 cut(s) 431, 1184, 1370
BspT104I TTCGAA 1 cut(s) 1613
BspT107I GGYRCC 3 cut(s) 1352, 1502, 1529
BsrGI TGTACA 2 cut(s) 51, 991
BsrI ACTGG 3 cut(s) 472, 1173, 1334
BssECI CCNNGG 7 cut(s) 361, 419, 584, 982, 1008, 1249, 1356
BssMI GATC 5 cut(s) 128, 423, 1189, 1375, 1542
BssT1I CCWWGG 5 cut(s) 361, 419, 584, 982, 1008
Bst2UI CCWGG 1 cut(s) 1250
Bst4CI ACNGT 3 cut(s) 568, 1529, 1680
Bst6I CTCTTC 3 cut(s) 753, 1167, 1594
BstAUI TGTACA 2 cut(s) 51, 991
BstBAI YACGTR 1 cut(s) 875
BstBI TTCGAA 1 cut(s) 1613
BstC8I GCNNGC 5 cut(s) 273, 643, 962, 1284, 1391
BstDEI CTNAG 5 cut(s) 447, 455, 768, 881, 1194
BstDSI CCRYGG 2 cut(s) 361, 1008
BstF5I GGATG 4 cut(s) 1066, 1106, 1110, 1296
BstH2I RGCGCY 1 cut(s) 283
BstHHI GCGC 1 cut(s) 282
BstKTI GATC 5 cut(s) 131, 426, 1192, 1378, 1545
BstMAI GTCTC 1 cut(s) 34
BstMBI GATC 5 cut(s) 128, 423, 1189, 1375, 1542
BstMCI CGRYCG 2 cut(s) 131, 567
BstMWI GCNNNNNNNGC 5 cut(s) 188, 277, 286, 325, 1339
BstNI CCWGG 1 cut(s) 1250
BstNSI RCATGY 3 cut(s) 18, 645, 1393
BstSCI CCNGG 1 cut(s) 1248
BstSFI CTRYAG 2 cut(s) 111, 1423
BstSLI GKGCMC 2 cut(s) 1355, 1505
BstSNI TACGTA 1 cut(s) 875
BstV1I GCAGC 3 cut(s) 178, 242, 697
BstV2I GAAGAC 2 cut(s) 99, 334
BstX2I RGATCY 2 cut(s) 423, 1375
BstYI RGATCY 2 cut(s) 423, 1375
BsuI GTATCC 2 cut(s) 359, 1672
BsuRI GGCC 3 cut(s) 360, 773, 1640
BtgI CCRYGG 2 cut(s) 361, 1008
BtsCI GGATG 4 cut(s) 1066, 1106, 1110, 1296
BtsIMutI CAGTG 2 cut(s) 1341, 1503
BveI ACCTGC 1 cut(s) 1430
Cac8I GCNNGC 5 cut(s) 273, 643, 962, 1284, 1391
CfoI GCGC 1 cut(s) 282
Cfr13I GGNCC 2 cut(s) 581, 772
CseI GACGC 1 cut(s) 1228
Csp6I GTAC 5 cut(s) 52, 657, 681, 992, 1274
CviQI GTAC 5 cut(s) 52, 657, 681, 992, 1274
DdeI CTNAG 5 cut(s) 447, 455, 768, 881, 1194
DpnI GATC 5 cut(s) 130, 425, 1191, 1377, 1544
DpnII GATC 5 cut(s) 128, 423, 1189, 1375, 1542
Eam1104I CTCTTC 3 cut(s) 753, 1167, 1594
EarI CTCTTC 3 cut(s) 753, 1167, 1594
Eco105I TACGTA 1 cut(s) 875
Eco130I CCWWGG 5 cut(s) 361, 419, 584, 982, 1008
Eco47I GGWCC 1 cut(s) 581
Eco57I CTGAAG 1 cut(s) 777
EcoO109I RGGNCCY 2 cut(s) 581, 772
EcoRII CCWGG 1 cut(s) 1248
EcoT14I CCWWGG 5 cut(s) 361, 419, 584, 982, 1008
EcoT22I ATGCAT 1 cut(s) 1344
ErhI CCWWGG 5 cut(s) 361, 419, 584, 982, 1008
FauI CCCGC 1 cut(s) 1591
Fnu4HI GCNGC 3 cut(s) 192, 231, 711
FokI GGATG 4 cut(s) 1073, 1113, 1117, 1303
Fsp4HI GCNGC 3 cut(s) 192, 231, 711
FspBI CTAG 4 cut(s) 272, 332, 404, 1720
GlaI GCGC 1 cut(s) 281
GluI GCNGC 3 cut(s) 192, 231, 711
GsaI CCCAGC 1 cut(s) 267
HaeII RGCGCY 1 cut(s) 283
HaeIII GGCC 3 cut(s) 360, 773, 1640
HgaI GACGC 1 cut(s) 1228
HhaI GCGC 1 cut(s) 282
Hin6I GCGC 1 cut(s) 280
HinP1I GCGC 1 cut(s) 280
HindIII AAGCTT 1 cut(s) 1280
HinfI GANTC 4 cut(s) 385, 800, 1198, 1610
HphI GGTGA 2 cut(s) 247, 1529
Hpy166II GTNNAC 1 cut(s) 700
Hpy188I TCNGA 9 cut(s) 91, 223, 390, 450, 458, 781, 839, 1218, 1705
Hpy188III TCNNGA 4 cut(s) 562, 902, 1098, 1124
Hpy8I GTNNAC 1 cut(s) 700
Hpy99I CGWCG 1 cut(s) 1222
HpyAV CCTTC 4 cut(s) 786, 1400, 1603, 1616
HpyCH4III ACNGT 3 cut(s) 568, 1529, 1680
HpyCH4IV ACGT 3 cut(s) 874, 1232, 1300
HpyF10VI GCNNNNNNNGC 5 cut(s) 188, 277, 286, 325, 1339
HpyF3I CTNAG 5 cut(s) 447, 455, 768, 881, 1194
HpySE526I ACGT 3 cut(s) 874, 1232, 1300
HspAI GCGC 1 cut(s) 280
Kzo9I GATC 5 cut(s) 128, 423, 1189, 1375, 1542
LmnI GCTCC 1 cut(s) 588
Lsp1109I GCAGC 3 cut(s) 178, 242, 697
LweI GCATC 1 cut(s) 1329
MaeI CTAG 4 cut(s) 272, 332, 404, 1720
MaeII ACGT 3 cut(s) 874, 1232, 1300
MaeIII GTNAC 5 cut(s) 142, 535, 721, 1517, 1552
MalI GATC 5 cut(s) 130, 425, 1191, 1377, 1544
MboI GATC 5 cut(s) 128, 423, 1189, 1375, 1542
MfeI CAATTG 1 cut(s) 1079
MflI RGATCY 2 cut(s) 423, 1375
MhlI GDGCHC 2 cut(s) 1355, 1505
MmeI TCCRAC 1 cut(s) 1241
MnlI CCTC 7 cut(s) 99, 350, 688, 815, 1051, 1351, 1597
Mph1103I ATGCAT 1 cut(s) 1344
MseI TTAA 4 cut(s) 186, 492, 651, 732
MslI CAYNNNNRTG 1 cut(s) 917
MspA1I CMGCKG 1 cut(s) 233
MspR9I CCNGG 1 cut(s) 1250
MunI CAATTG 1 cut(s) 1079
Mva1269I GAATGC 1 cut(s) 769
MvaI CCWGG 1 cut(s) 1250
MwoI GCNNNNNNNGC 5 cut(s) 188, 277, 286, 325, 1339
NcoI CCATGG 2 cut(s) 361, 1008
NdeII GATC 5 cut(s) 128, 423, 1189, 1375, 1542
NheI GCTAGC 1 cut(s) 271
NlaIV GGNNCC 4 cut(s) 774, 1354, 1504, 1531
NmuCI GTSAC 4 cut(s) 142, 535, 721, 1517
NsiI ATGCAT 1 cut(s) 1344
NspI RCATGY 3 cut(s) 18, 645, 1393
NspV TTCGAA 1 cut(s) 1613
OliI CACNNNNGTG 1 cut(s) 917
PaeI GCATGC 2 cut(s) 645, 1393
PctI GAATGC 1 cut(s) 769
PfeI GAWTC 4 cut(s) 385, 800, 1198, 1610
PkrI GCNGC 3 cut(s) 193, 232, 712
Ple19I CGATCG 1 cut(s) 131
Ppu21I YACGTR 1 cut(s) 875
PpuMI RGGWCCY 1 cut(s) 581
Psp5II RGGWCCY 1 cut(s) 581
Psp6I CCWGG 1 cut(s) 1248
PspFI CCCAGC 1 cut(s) 263
PspGI CCWGG 1 cut(s) 1248
PspN4I GGNNCC 4 cut(s) 774, 1354, 1504, 1531
PspPI GGNCC 2 cut(s) 581, 772
PspPPI RGGWCCY 1 cut(s) 581
PsrI GAACNNNNNNTAC 2 cut(s) 1471, 1503
PstI CTGCAG 1 cut(s) 1427
PsuI RGATCY 2 cut(s) 423, 1375
PvuI CGATCG 1 cut(s) 131
RgaI GCGATCGC 1 cut(s) 131
RsaI GTAC 5 cut(s) 53, 658, 682, 993, 1275
RsaNI GTAC 5 cut(s) 52, 657, 681, 992, 1274
RseI CAYNNNNRTG 1 cut(s) 917
SaqAI TTAA 4 cut(s) 186, 492, 651, 732
SatI GCNGC 3 cut(s) 192, 231, 711
Sau3AI GATC 5 cut(s) 128, 423, 1189, 1375, 1542
Sau96I GGNCC 2 cut(s) 581, 772
ScrFI CCNGG 1 cut(s) 1250
SduI GDGCHC 2 cut(s) 1355, 1505
SfaAI GCGATCGC 1 cut(s) 131
SfaNI GCATC 1 cut(s) 1329
SfcI CTRYAG 2 cut(s) 111, 1423
SfuI TTCGAA 1 cut(s) 1613
SgfI GCGATCGC 1 cut(s) 131
SinI GGWCC 1 cut(s) 581
SmiMI CAYNNNNRTG 1 cut(s) 917
SmlI CTYRAG 2 cut(s) 1634, 1648
SmoI CTYRAG 2 cut(s) 1634, 1648
SnaBI TACGTA 1 cut(s) 875
SphI GCATGC 2 cut(s) 645, 1393
SsiI CCGC 2 cut(s) 233, 1584
SspI AATATT 1 cut(s) 792
SspMI CTAG 4 cut(s) 272, 332, 404, 1720
StyD4I CCNGG 1 cut(s) 1248
StyI CCWWGG 5 cut(s) 361, 419, 584, 982, 1008
TaaI ACNGT 3 cut(s) 568, 1529, 1680
TaiI ACGT 3 cut(s) 877, 1235, 1303
TaqI TCGA 5 cut(s) 430, 563, 903, 1545, 1613
TatI WGTACW 3 cut(s) 51, 656, 991
TfiI GAWTC 4 cut(s) 385, 800, 1198, 1610
Tru1I TTAA 4 cut(s) 186, 492, 651, 732
Tru9I TTAA 4 cut(s) 186, 492, 651, 732
TscAI CASTG 2 cut(s) 1341, 1503
TseFI GTSAC 4 cut(s) 142, 535, 721, 1517
TseI GCWGC 3 cut(s) 191, 230, 710
Tsp45I GTSAC 4 cut(s) 142, 535, 721, 1517
TspDTI ATGAA 3 cut(s) 84, 1077, 1163
TspRI CASTG 2 cut(s) 1341, 1503
VpaK11BI GGWCC 1 cut(s) 581
XapI RAATTY 3 cut(s) 254, 432, 1014
XceI RCATGY 3 cut(s) 18, 645, 1393
XspI CTAG 4 cut(s) 272, 332, 404, 1720
Zsp2I ATGCAT 1 cut(s) 1344
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.