RLG00000026238

Cyclic nucleotide-gated ion channel 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
OG0000119
Physical Location & Seq
Forward (+)
1474950 .. 1477904
2955 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000026238

Sequence Viewer

Length: 1839 bp
ATGTCTAAACATCAGGTACCCAACTACGATGAGAGCATCATCGATTTGAGCGTTACACAAGGAATAGGTTATGATTTCAACTGTCCTGAGGCTCTATTGCAACGTCCAATACGGAAATGTGAACCTGAAGAAACTGAAGCAAGCGCCAAAGGGAAAATGCCAACAGTTGCGGAGATTCTCTCAGTTTTGAACCCATGGTGGAATGCGATACTATTAACTTCATGTGTGATTGCAGTTTTATTTGATCCTTTGTTCTTTTACATTCCATACATCAATGAGAAAGAAAAGTGCATGGGAATCGATAAACAAGTGCGGACTGCAGCTCTGGTTTTCCGATCAGTCACGGACATCACTTTCCTAGTGCATATCATATACCAACTTCGTGAAGCTTTCAAATTTGCAGCCTCAAAGGTTCCAAGGGATAAAAATTCAAAAAATTGGGAATGGGAATCGGTATCCCGAGTTCAGATGATTCAGTTTGCAAAGGAATTTTCTCGCAAATTGTCGTGGCGCTCTTTCCTAACTAATGTTTTCGCTATTTTCCCCATGCCACAACTGCTAATTGTATGGTTCTTTTTCGAAATGGGAGGCAGTAACTATTTGGAGAGAAGAAAGATTCTGAGCAGTTTTGTTCTAGTCCAATATGTGCCAAGAATTTATCGAATTTATCTATCGTATACCGCGGTTACACATTCCGCATTATGGGTTAAAGGTGCATTCAATTTTTCCTCTACATCCTTGCCAATACTGGGAGCTTTTTGGTACTTTTTTTCTATTTTTCGAGAGACATCATGTTGGTATCGAAGTTGCAAAATTGATGCATATCCAGGATCAAGATGTACTTTTTATTGCCATGACAAAACTCCAATTGTAACGGACGGATTCAATAAAACTACTCTAGGAGATCTTTGCCTTGTAAAAGTTCCATATGAAATGATTGAACCACCATTTGATTTTGGAATATTTTTTGATGCCCTCAAAAATGATATCCATGGGCCAATAAATTTTCCAACAAAGATTGGTTTCTGCTTTTGGTGGGCCTTGCGAAATTTAAGGGCAACTACAAGAGCGGAGGAGGTAAGAGAGAAGATTCAGACCAAAAAGAACGATATAGAAAAGTGGATGGAAAAAAATGGCCTCCAAGATGACATGAAGGAAGAGATCATGAAAAACATTAAGCAGAAATTGGAAGAGGACATAAATGCAGATCTGGAGAATCTATTCTCTGTTCTTCCCTGGTATACCAAGAAAGCTCTAAAGCGCGTTCTTTGCATGAGTACGCTAAGAAAAGTACCAATGCTTAGCCAGATGGATGAAAAAGTTTTGAAAATGATGTGCGACTATCTGAAGCCGGTGAATTACCCGGAGAATACCTTGGTTTTTCAGATGGGAGAACCATTTGATCGAATGGTCTTCATTACAGAAGGGCTTATGTGGACTTACACGACTGCTACTGAGAGTAGTCATTATGGAAAAGCAACAGAACCGGCTACTTCTCCATCCATGGATACCAACTTCCTCAAGACGGGTGATTCTTATGGACACGCGCTTCTGCAGTTTGCATCATCATCTCTTGCGGCACTTCCTACCTCGAACGCAAATGTCCGGTGTCACACAAAGGTTGAGGCGTTTGTTCTCATGGCCAAGGACTTGAAAAACATAGTAACTAAATGCGAACATTTGTGGCCTTTCGACTACAATGCTTCTAAAGATGAGGCGGCGGATCATGTGCCACTACTGGGAAGTTTCAGCAACAAGAAGAGCCAAAGAAGGGTGTATCAACATCGACCACTGGCAACCGTGGGTGATGCGAAGCTGAAGCCTGAAAATCGCCCCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
Ion_trans cNMP_binding

Protein Analysis

613

Amino Acids

70.79

Weight (kDa)

8.7

Isoelectric Point (pI)

45.18

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000119)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g10570 FvH4_4g36390 FvH4_7g31840 FvH4_7g31840 FvH4_7g31850 FvH4_7g31850 FvH4_7g31861 FvH4_7g31861 FvH4_7g31950
malus_domestica MD01G1054600.v1.1 MD01G1221100.v1.1 MD01G1221400.v1.1 MD01G1221600.v1.1 MD01G1221800.v1.1 MD01G1222000.v1.1 MD01G1222100.v1.1 MD07G1140800.v1.1 MD07G1291200.v1.1 MD07G1291400.v1.1 MD07G1291500.v1.1 MD07G1291700.v1.1 MD07G1292500.v1.1 MD07G1292700.v1.1 MD07G1292800.v1.1 MD07G1292900.v1.1 MD08G1241600.v1.1 MD11G1083800.v1.1 MD15G1431600.v1.1
prunus_persica Prupe.1G017800_v2.0.a1 Prupe.1G017800_v2.0.a1 Prupe.1G162800_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312700_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G143000_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1
pyrus_communis pycom01g23050 pycom01g23070 pycom01g23090 pycom01g23100 pycom01g23110 pycom01g23120 pycom01g23170 pycom07g26410 pycom07g26440 pycom07g26470 pycom07g26480 pycom07g26490 pycom07g26500 pycom07g26510 pycom07g26530 pycom07g26540 pycom07g26570 pycom07g26580 pycom07g26590 pycom08g20940
rosa_chinensis RchiOBHm_Chr1g0324571 RchiOBHm_Chr1g0336181 RchiOBHm_Chr1g0381061 RchiOBHm_Chr1g0381091 RchiOBHm_Chr1g0381121 RchiOBHm_Chr1g0381131 RchiOBHm_Chr1g0381141 RchiOBHm_Chr1g0381161 RchiOBHm_Chr1g0381211 RchiOBHm_Chr2g0110361 RchiOBHm_Chr2g0120231 RchiOBHm_Chr3g0486281 RchiOBHm_Chr3g0486311 RchiOBHm_Chr3g0486401 RchiOBHm_Chr4g0409511 RchiOBHm_Chr4g0409521 RchiOBHm_Chr5g0017271 RchiOBHm_Chr5g0048781 RchiOBHm_Chr5g0048811
rosa_laevigata RLG00000002401 RLG00000008559 RLG00000017798 RLG00000017799 RLG00000023082 RLG00000023088 RLG00000026230 RLG00000026238 RLG00000026240 RLG00000026241 RLG00000026242 RLG00000026243 RLG00000026244 RLG00000026246 RLG00000026247 RLG00000026248 RLG00000029876 RLG00000030189 RLG00000034579
rosa_multiflora Rmu_co8101374.1_g000001 Rmu_co8309149.1_g000001 Rmu_co8450063.1_g000001 Rmu_sc0000441.1_g000094 Rmu_sc0000479.1_g000005 Rmu_sc0000647.1_g000006 Rmu_sc0001393.1_g000031 Rmu_sc0001423.1_g000037 Rmu_sc0001616.1_g000015 Rmu_sc0001857.1_g000011 Rmu_sc0002183.1_g000013 Rmu_sc0002183.1_g000028 Rmu_sc0002183.1_g000030 Rmu_sc0002688.1_g000003 Rmu_sc0002688.1_g000020 Rmu_sc0003801.1_g000003 Rmu_sc0003801.1_g000004 Rmu_sc0004125.1_g000006 Rmu_sc0004494.1_g000005 Rmu_sc0004494.1_g000006 Rmu_sc0004494.1_g000008 Rmu_sc0004494.1_g000009 Rmu_sc0005842.1_g000004 Rmu_sc0006872.1_g000001 Rmu_sc0006872.1_g000005 Rmu_sc0006872.1_g000009 Rmu_sc0006872.1_g000010 Rmu_sc0008053.1_g000026
rosa_roxburghii Rroxscaffold_159G00432960 Rroxscaffold_1G00033060 Rroxscaffold_2G00123150 Rroxscaffold_2G00123170 Rroxscaffold_2G00133500 Rroxscaffold_2G00133550 Rroxscaffold_4G00278650 Rroxscaffold_4G00278750 Rroxscaffold_4G00278790 Rroxscaffold_4G00278800 Rroxscaffold_4G00278810 Rroxscaffold_4G00325390 Rroxscaffold_5G00354010 Rroxscaffold_6G00395890 Rroxscaffold_6G00395900 Rroxscaffold_6G00395920
rosa_rugosa Rorug01G0046900.1 Rorug01G0427000 Rorug01G0427100 Rorug01G0427200 Rorug01G0427300 Rorug01G0427400 Rorug01G0427500 Rorug01G0427500 Rorug01G0427600 Rorug01G0427600 Rorug01G0427700 Rorug01G0427700 Rorug01G0427800 Rorug01G0428700 Rorug02G0166400 Rorug02G0166500 Rorug02G0166500 Rorug02G0166600 Rorug02G0166600 Rorug02G0166700 Rorug02G0167300 Rorug02G0167300 Rorug02G0167300 Rorug03G0224600 Rorug03G0224600 Rorug04G0094400 Rorug05G0241100 Rorug05G0241200
rosa_samantha Rh1BG407700 Rh1BG407900 Rh1BG409000 Rh1CG064700 Rh1CG420900 Rh1CG421000 Rh1CG421200 Rh1CG421300 Rh1CG421800 Rh1CG421900 Rh1CG422000 Rh1CG422200 Rh1CG422300 Rh1CG423600 Rh1DG437600 Rh1DG438900 Rh1DG439000 Rh1DG440300 Rh2AG219100 Rh2CG220700 Rh2DG225300 Rh3AG274400 Rh3AG274600 Rh3CG308900 Rh3DG305800 Rh4AG156400 Rh5AG129000 Rh5AG320900 Rh5CG139600
rosa_wichuraiana Rw1G005300 Rw1G039280 Rw1G039300 Rw1G039310 Rw1G039320 Rw1G039330 Rw1G039340 Rw1G039360 Rw1G039390 Rw2G016910 Rw2G022800 Rw3G024330 Rw3G024340 Rw3G024350 Rw3G024400 Rw4G012810 Rw5G030120 Rw5G030280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 16
AccB1I GGYRCC 1 cut(s) 16
AccBSI CCGCTC 1 cut(s) 1070
AccI GTMKAC 2 cut(s) 677, 1241
AccII CGCG 3 cut(s) 683, 1263, 1547
AciI CCGC 9 cut(s) 170, 313, 681, 683, 696, 1070, 1577, 1718, 1721
AclWI GGATC 3 cut(s) 239, 838, 1731
AcoI YGGCCR 1 cut(s) 1641
AcsI RAATTY 7 cut(s) 395, 427, 488, 654, 663, 1003, 1048
AcuI CTGAAG 4 cut(s) 147, 156, 1367, 1838
AfaI GTAC 5 cut(s) 18, 764, 841, 1279, 1293
AfiI CCNNNNNNNGG 5 cut(s) 702, 749, 1525, 1739, 1771
AgsI TTSAA 9 cut(s) 79, 190, 394, 432, 721, 886, 941, 1327, 1654
AjnI CCWGG 2 cut(s) 826, 1235
AluBI AGCT 5 cut(s) 323, 389, 755, 1253, 1816
AluI AGCT 5 cut(s) 323, 389, 755, 1253, 1816
Alw26I GTCTC 1 cut(s) 779
AlwI GGATC 3 cut(s) 239, 838, 1731
Ama87I CYCGRG 1 cut(s) 459
AoxI GGCC 5 cut(s) 995, 1038, 1135, 1641, 1685
ApeKI GCWGC 2 cut(s) 320, 401
ApoI RAATTY 7 cut(s) 395, 427, 488, 654, 663, 1003, 1048
Asp700I GAANNNNTTC 1 cut(s) 1220
Asp718I GGTACC 1 cut(s) 16
AspLEI GCGC 4 cut(s) 146, 513, 1263, 1549
AspS9I GGNCC 2 cut(s) 995, 1038
AsuC2I CCSGG 1 cut(s) 1364
AsuHPI GGTGA 3 cut(s) 1366, 1541, 1817
AsuII TTCGAA 1 cut(s) 579
AvaI CYCGRG 1 cut(s) 459
AxyI CCTNAGG 1 cut(s) 87
BalI TGGCCA 1 cut(s) 1643
BanI GGYRCC 1 cut(s) 16
BbsI GAAGAC 1 cut(s) 1405
BbvI GCAGC 2 cut(s) 332, 413
BccI CCATC 4 cut(s) 1117, 1303, 1381, 1507
BcgI CGANNNNNNTGC 4 cut(s) 280, 314, 1682, 1716
BciT130I CCWGG 2 cut(s) 828, 1237
BciVI GTATCC 2 cut(s) 466, 1501
BcnI CCSGG 1 cut(s) 1364
BcoDI GTCTC 1 cut(s) 779
BfaI CTAG 4 cut(s) 359, 635, 899, 1837
BfmI CTRYAG 2 cut(s) 318, 1553
BfoI RGCGCY 2 cut(s) 147, 514
BfuI GTATCC 2 cut(s) 466, 1501
BglII AGATCT 2 cut(s) 904, 1207
BisI GCNGC 4 cut(s) 321, 402, 1578, 1719
BlpI GCTNAGC 1 cut(s) 1301
BlsI GCNGC 4 cut(s) 322, 403, 1579, 1720
Bme1390I CCNGG 3 cut(s) 828, 1237, 1364
BmeT110I CYCGRG 1 cut(s) 459
BmgT120I GGNCC 2 cut(s) 995, 1038
BmiI GGNNCC 2 cut(s) 18, 414
BmrFI CCNGG 3 cut(s) 828, 1237, 1364
BmrI ACTGGG 2 cut(s) 758, 1748
BmsI GCATC 5 cut(s) 45, 808, 961, 1571, 1798
BmuI ACTGGG 2 cut(s) 758, 1748
BpiI GAAGAC 1 cut(s) 1405
BplI GAGNNNNNCTC 2 cut(s) 164, 196
BpmI CTGGAG 1 cut(s) 1232
Bpu1102I GCTNAGC 1 cut(s) 1301
Bpu14I TTCGAA 1 cut(s) 579
BpuEI CTTGAG 1 cut(s) 1505
BpuMI CCSGG 1 cut(s) 1364
Bsa29I ATCGAT 2 cut(s) 42, 300
BsaBI GATNNNNATC 1 cut(s) 822
BsaJI CCNNGG 9 cut(s) 194, 416, 681, 991, 1235, 1374, 1503, 1644, 1800
BsaWI WCCGGW 1 cut(s) 1605
Bsc4I CCNNNNNNNGG 5 cut(s) 702, 749, 1525, 1739, 1771
Bse118I RCCGGY 2 cut(s) 1351, 1486
Bse1I ACTGG 3 cut(s) 753, 1743, 1797
Bse21I CCTNAGG 1 cut(s) 87
Bse8I GATNNNNATC 1 cut(s) 822
BseBI CCWGG 2 cut(s) 828, 1237
BseCI ATCGAT 2 cut(s) 42, 300
BseDI CCNNGG 9 cut(s) 194, 416, 681, 991, 1235, 1374, 1503, 1644, 1800
BseGI GGATG 4 cut(s) 734, 1128, 1318, 1499
BseJI GATNNNNATC 1 cut(s) 822
BseLI CCNNNNNNNGG 5 cut(s) 702, 749, 1525, 1739, 1771
BseMII CTCAG 4 cut(s) 78, 195, 611, 1446
BseNI ACTGG 3 cut(s) 753, 1743, 1797
BseRI GAGGAG 1 cut(s) 1088
BseXI GCAGC 2 cut(s) 332, 413
Bsh1236I CGCG 3 cut(s) 683, 1263, 1547
BshFI GGCC 5 cut(s) 997, 1040, 1137, 1643, 1687
BshNI GGYRCC 1 cut(s) 16
BshVI ATCGAT 2 cut(s) 42, 300
BsiHKCI CYCGRG 1 cut(s) 459
BsiSI CCGG 4 cut(s) 1352, 1364, 1487, 1606
BslI CCNNNNNNNGG 5 cut(s) 702, 749, 1525, 1739, 1771
BsmAI GTCTC 1 cut(s) 779
BsmI GAATGC 2 cut(s) 208, 716
BsnI GGCC 5 cut(s) 997, 1040, 1137, 1643, 1687
BsoBI CYCGRG 1 cut(s) 459
Bsp119I TTCGAA 1 cut(s) 579
Bsp143I GATC 8 cut(s) 244, 335, 830, 904, 1161, 1207, 1402, 1723
Bsp1720I GCTNAGC 1 cut(s) 1301
Bsp19I CCATGG 3 cut(s) 194, 991, 1503
BspACI CCGC 9 cut(s) 170, 313, 681, 683, 696, 1070, 1577, 1718, 1721
BspANI GGCC 5 cut(s) 997, 1040, 1137, 1643, 1687
BspCNI CTCAG 4 cut(s) 79, 194, 612, 1447
BspDI ATCGAT 2 cut(s) 42, 300
BspFNI CGCG 3 cut(s) 683, 1263, 1547
BspHI TCATGA 1 cut(s) 1164
BspLI GGNNCC 2 cut(s) 18, 414
BspMAI CTGCAG 2 cut(s) 322, 1557
BspPI GGATC 3 cut(s) 239, 838, 1731
BspQI GCTCTTC 1 cut(s) 1754
BspT104I TTCGAA 1 cut(s) 579
BspT107I GGYRCC 1 cut(s) 16
BsrBI CCGCTC 1 cut(s) 1070
BsrFI RCCGGY 2 cut(s) 1351, 1486
BsrI ACTGG 3 cut(s) 753, 1743, 1797
BssAI RCCGGY 2 cut(s) 1351, 1486
BssECI CCNNGG 9 cut(s) 194, 416, 681, 991, 1235, 1374, 1503, 1644, 1800
BssMI GATC 8 cut(s) 244, 335, 830, 904, 1161, 1207, 1402, 1723
BssNAI GTATAC 2 cut(s) 678, 1242
BssT1I CCWWGG 6 cut(s) 194, 416, 991, 1374, 1503, 1644
Bst1107I GTATAC 2 cut(s) 678, 1242
Bst2UI CCWGG 2 cut(s) 828, 1237
Bst4CI ACNGT 3 cut(s) 83, 166, 1801
Bst6I CTCTTC 3 cut(s) 1152, 1185, 1754
BstBI TTCGAA 1 cut(s) 579
BstC8I GCNNGC 1 cut(s) 142
BstDEI CTNAG 6 cut(s) 87, 181, 620, 1283, 1301, 1455
BstDSI CCRYGG 5 cut(s) 194, 681, 991, 1503, 1800
BstF5I GGATG 4 cut(s) 734, 1128, 1318, 1499
BstFNI CGCG 3 cut(s) 683, 1263, 1547
BstH2I RGCGCY 2 cut(s) 147, 514
BstHHI GCGC 4 cut(s) 146, 513, 1263, 1549
BstKTI GATC 8 cut(s) 247, 338, 833, 907, 1164, 1210, 1405, 1726
BstMAI GTCTC 1 cut(s) 779
BstMBI GATC 8 cut(s) 244, 335, 830, 904, 1161, 1207, 1402, 1723
BstMWI GCNNNNNNNGC 2 cut(s) 556, 1269
BstNI CCWGG 2 cut(s) 828, 1237
BstSCI CCNGG 3 cut(s) 826, 1235, 1362
BstSFI CTRYAG 2 cut(s) 318, 1553
BstUI CGCG 3 cut(s) 683, 1263, 1547
BstV1I GCAGC 2 cut(s) 332, 413
BstV2I GAAGAC 1 cut(s) 1405
BstX2I RGATCY 2 cut(s) 904, 1207
BstYI RGATCY 2 cut(s) 904, 1207
BstZ17I GTATAC 2 cut(s) 678, 1242
Bsu15I ATCGAT 2 cut(s) 42, 300
Bsu36I CCTNAGG 1 cut(s) 87
BsuI GTATCC 2 cut(s) 466, 1501
BsuRI GGCC 5 cut(s) 997, 1040, 1137, 1643, 1687
BsuTUI ATCGAT 2 cut(s) 42, 300
BtgI CCRYGG 5 cut(s) 194, 681, 991, 1503, 1800
BtsCI GGATG 4 cut(s) 734, 1128, 1318, 1499
BtsIMutI CAGTG 1 cut(s) 1790
Cac8I GCNNGC 1 cut(s) 142
CciI TCATGA 1 cut(s) 1164
CfoI GCGC 4 cut(s) 146, 513, 1263, 1549
Cfr10I RCCGGY 2 cut(s) 1351, 1486
Cfr13I GGNCC 2 cut(s) 995, 1038
Cfr42I CCGCGG 1 cut(s) 684
ClaI ATCGAT 2 cut(s) 42, 300
Csp6I GTAC 5 cut(s) 17, 763, 840, 1278, 1292
CviQI GTAC 5 cut(s) 17, 763, 840, 1278, 1292
DdeI CTNAG 6 cut(s) 87, 181, 620, 1283, 1301, 1455
DpnI GATC 8 cut(s) 246, 337, 832, 906, 1163, 1209, 1404, 1725
DpnII GATC 8 cut(s) 244, 335, 830, 904, 1161, 1207, 1402, 1723
EaeI YGGCCR 1 cut(s) 1641
Eam1104I CTCTTC 3 cut(s) 1152, 1185, 1754
EarI CTCTTC 3 cut(s) 1152, 1185, 1754
EciI GGCGGA 1 cut(s) 1736
Eco130I CCWWGG 6 cut(s) 194, 416, 991, 1374, 1503, 1644
Eco32I GATATC 1 cut(s) 988
Eco57I CTGAAG 4 cut(s) 147, 156, 1367, 1838
Eco81I CCTNAGG 1 cut(s) 87
Eco88I CYCGRG 1 cut(s) 459
EcoRII CCWGG 2 cut(s) 826, 1235
EcoRV GATATC 1 cut(s) 988
EcoT14I CCWWGG 6 cut(s) 194, 416, 991, 1374, 1503, 1644
EcoT22I ATGCAT 1 cut(s) 823
ErhI CCWWGG 6 cut(s) 194, 416, 991, 1374, 1503, 1644
FalI AAGNNNNNCTT 2 cut(s) 826, 858
FauNDI CATATG 1 cut(s) 928
FblI GTMKAC 2 cut(s) 677, 1241
Fnu4HI GCNGC 4 cut(s) 321, 402, 1578, 1719
FokI GGATG 4 cut(s) 721, 1135, 1325, 1486
Fsp4HI GCNGC 4 cut(s) 321, 402, 1578, 1719
FspBI CTAG 4 cut(s) 359, 635, 899, 1837
GlaI GCGC 4 cut(s) 145, 512, 1262, 1548
GluI GCNGC 4 cut(s) 321, 402, 1578, 1719
GsuI CTGGAG 1 cut(s) 1232
HaeII RGCGCY 2 cut(s) 147, 514
HaeIII GGCC 5 cut(s) 997, 1040, 1137, 1643, 1687
HapII CCGG 4 cut(s) 1352, 1364, 1487, 1606
HhaI GCGC 4 cut(s) 146, 513, 1263, 1549
Hin6I GCGC 4 cut(s) 144, 511, 1261, 1547
HinP1I GCGC 4 cut(s) 144, 511, 1261, 1547
HindIII AAGCTT 1 cut(s) 387
HinfI GANTC 9 cut(s) 175, 297, 449, 472, 616, 882, 1090, 1216, 1532
HpaII CCGG 4 cut(s) 1352, 1364, 1487, 1606
HphI GGTGA 3 cut(s) 1366, 1541, 1817
Hpy166II GTNNAC 4 cut(s) 122, 678, 1242, 1437
Hpy188I TCNGA 6 cut(s) 335, 468, 621, 1095, 1347, 1386
Hpy188III TCNNGA 8 cut(s) 86, 383, 459, 782, 834, 1165, 1211, 1522
Hpy8I GTNNAC 4 cut(s) 122, 678, 1242, 1437
HpyAV CCTTC 3 cut(s) 1147, 1418, 1764
HpyCH4III ACNGT 3 cut(s) 83, 166, 1801
HpyCH4IV ACGT 1 cut(s) 103
HpyF10VI GCNNNNNNNGC 2 cut(s) 556, 1269
HpyF3I CTNAG 6 cut(s) 87, 181, 620, 1283, 1301, 1455
HpySE526I ACGT 1 cut(s) 103
HspAI GCGC 4 cut(s) 144, 511, 1261, 1547
KpnI GGTACC 1 cut(s) 20
KspI CCGCGG 1 cut(s) 684
Kzo9I GATC 8 cut(s) 244, 335, 830, 904, 1161, 1207, 1402, 1723
LguI GCTCTTC 1 cut(s) 1754
LmnI GCTCC 1 cut(s) 752
Lsp1109I GCAGC 2 cut(s) 332, 413
LweI GCATC 5 cut(s) 45, 808, 961, 1571, 1798
MaeI CTAG 4 cut(s) 359, 635, 899, 1837
MaeII ACGT 1 cut(s) 103
MaeIII GTNAC 7 cut(s) 52, 340, 593, 685, 871, 1610, 1663
MalI GATC 8 cut(s) 246, 337, 832, 906, 1163, 1209, 1404, 1725
MbiI CCGCTC 1 cut(s) 1070
MboI GATC 8 cut(s) 244, 335, 830, 904, 1161, 1207, 1402, 1723
MboII GAAGA 8 cut(s) 140, 621, 1099, 1169, 1202, 1223, 1405, 1771
MfeI CAATTG 1 cut(s) 867
MflI RGATCY 2 cut(s) 904, 1207
MlsI TGGCCA 1 cut(s) 1643
MluNI TGGCCA 1 cut(s) 1643
MmeI TCCRAC 1 cut(s) 1034
Mox20I TGGCCA 1 cut(s) 1643
Mph1103I ATGCAT 1 cut(s) 823
MroXI GAANNNNTTC 1 cut(s) 1220
MscI TGGCCA 1 cut(s) 1643
MseI TTAA 4 cut(s) 215, 708, 1052, 1176
Msp20I TGGCCA 1 cut(s) 1643
MspA1I CMGCKG 1 cut(s) 683
MspI CCGG 4 cut(s) 1352, 1364, 1487, 1606
MspR9I CCNGG 3 cut(s) 828, 1237, 1364
MunI CAATTG 1 cut(s) 867
Mva1269I GAATGC 2 cut(s) 208, 716
MvaI CCWGG 2 cut(s) 828, 1237
MvnI CGCG 3 cut(s) 683, 1263, 1547
MwoI GCNNNNNNNGC 2 cut(s) 556, 1269
NciI CCSGG 1 cut(s) 1364
NcoI CCATGG 3 cut(s) 194, 991, 1503
NdeI CATATG 1 cut(s) 928
NdeII GATC 8 cut(s) 244, 335, 830, 904, 1161, 1207, 1402, 1723
NlaIV GGNNCC 2 cut(s) 18, 414
NmuCI GTSAC 2 cut(s) 340, 1610
NsiI ATGCAT 1 cut(s) 823
NspV TTCGAA 1 cut(s) 579
PagI TCATGA 1 cut(s) 1164
PciSI GCTCTTC 1 cut(s) 1754
PcsI WCGNNNNNNNCGW 1 cut(s) 48
PctI GAATGC 2 cut(s) 208, 716
PdmI GAANNNNTTC 1 cut(s) 1220
PfeI GAWTC 9 cut(s) 175, 297, 449, 472, 616, 882, 1090, 1216, 1532
PfoI TCCNGGA 1 cut(s) 826
PkrI GCNGC 4 cut(s) 322, 403, 1579, 1720
Psp6I CCWGG 2 cut(s) 826, 1235
PspGI CCWGG 2 cut(s) 826, 1235
PspN4I GGNNCC 2 cut(s) 18, 414
PspPI GGNCC 2 cut(s) 995, 1038
PsrI GAACNNNNNNTAC 2 cut(s) 447, 479
PstI CTGCAG 2 cut(s) 322, 1557
PsuI RGATCY 2 cut(s) 904, 1207
RsaI GTAC 5 cut(s) 18, 764, 841, 1279, 1293
RsaNI GTAC 5 cut(s) 17, 763, 840, 1278, 1292
SacII CCGCGG 1 cut(s) 684
SapI GCTCTTC 1 cut(s) 1754
SaqAI TTAA 4 cut(s) 215, 708, 1052, 1176
SatI GCNGC 4 cut(s) 321, 402, 1578, 1719
Sau3AI GATC 8 cut(s) 244, 335, 830, 904, 1161, 1207, 1402, 1723
Sau96I GGNCC 2 cut(s) 995, 1038
ScrFI CCNGG 3 cut(s) 828, 1237, 1364
SfaNI GCATC 5 cut(s) 45, 808, 961, 1571, 1798
SfcI CTRYAG 2 cut(s) 318, 1553
Sfr303I CCGCGG 1 cut(s) 684
SfuI TTCGAA 1 cut(s) 579
SgrBI CCGCGG 1 cut(s) 684
SmlI CTYRAG 1 cut(s) 1520
SmoI CTYRAG 1 cut(s) 1520
SsiI CCGC 9 cut(s) 170, 313, 681, 683, 696, 1070, 1577, 1718, 1721
SspI AATATT 1 cut(s) 963
SspMI CTAG 4 cut(s) 359, 635, 899, 1837
StyD4I CCNGG 3 cut(s) 826, 1235, 1362
StyI CCWWGG 6 cut(s) 194, 416, 991, 1374, 1503, 1644
TaaI ACNGT 3 cut(s) 83, 166, 1801
TaiI ACGT 1 cut(s) 106
TatI WGTACW 1 cut(s) 839
TauI GCSGC 2 cut(s) 1580, 1721
TfiI GAWTC 9 cut(s) 175, 297, 449, 472, 616, 882, 1090, 1216, 1532
Tru1I TTAA 4 cut(s) 215, 708, 1052, 1176
Tru9I TTAA 4 cut(s) 215, 708, 1052, 1176
TscAI CASTG 1 cut(s) 1797
TseFI GTSAC 2 cut(s) 340, 1610
TseI GCWGC 2 cut(s) 320, 401
Tsp45I GTSAC 2 cut(s) 340, 1610
TspDTI ATGAA 6 cut(s) 210, 945, 1166, 1181, 1329, 1405
TspGWI ACGGA 4 cut(s) 127, 359, 890, 894
TspRI CASTG 1 cut(s) 1797
XapI RAATTY 7 cut(s) 395, 427, 488, 654, 663, 1003, 1048
XmiI GTMKAC 2 cut(s) 677, 1241
XmnI GAANNNNTTC 1 cut(s) 1220
XspI CTAG 4 cut(s) 359, 635, 899, 1837
Zsp2I ATGCAT 1 cut(s) 823
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.