RLG00000023082

Cyclic nucleotide-gated ion channel 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr5
OG0000119
Physical Location & Seq
Forward (+)
17835026 .. 17841879
6854 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000023082

Sequence Viewer

Length: 1863 bp
ATGGCGATGAGCACCGTCGCTGACATCCTCTGGGAGCTCAAGCCTTATCCGCCACCGATTAGAATCTCTGTCTCTGTATGTCGATCTGGATATCGTTTCTCTTTCTCGTCATCTATTCTATTTTCTTTGGTCAGCATCACACGGGGAGTAAAGTACAGTTTCGATAATGTTGAGGCGCAACCGCCAGATCCCCCATGCAGAGATCGAGATGCAGTTTCAACAAAACAAAAATTGGAAGAAACACTTCTTTCAGTTTCATTCTGGAATACAATGTTCATAATTGCATGTGTGATTGCAGTCTCATTAGACCCGTTGTTCTTCTACATTCCAGTCATCAATGAAGAACAAAAGTGCCTTGCAGTAGACAGAGAGATGAGGACTATAGCCCTCACTTTGCGATCGCTCACTGATGCCACTTTTATAGTGAATATCATTTATCATGTTTGCAAAGCCGTTAACGATGCGTACAAAGTACACAAAGAAAAAAAGTCTGATGAATTGGCATCGGATTGGGAATTTTCGAAGTTATCAGCAGCTGAGATAATTCCATTTGCTAAATTAGTTGCTGGGAAGATAGCATGGCACTCTACTCTAACCAGCATTTTAGCTGTTTTTCCCATGCCACAACTGCTTCTAGTATTTGTCTTCTTCAAAATGAGAGGCCATGGATACTTGGAGCATAGAAAGATTCTAAACGTCTTTCTCCTCGCTCAATATCTGCCAAGGATCTATCGAATTTACCTATCATCTCAGAAACTCAAACAAATTACTGGAATATGGACTAAAGCTCTATTTAATTTTTTTCTATATATCCTTGCAAGTCATGTTCTTGGAGCTTTTTGGTACTTCTTTTCTATTCAACGAGAAACTTCTTGTTGGCACCGCGCATGTGTAAATAATAATATAGATGTTGAAGAATGTATGAGTACCTTTTACTGCGAGGGTCACAATACTACAACAAGAAATGCCACATTCCTCAATCAATTGTGTCCTATAAGTGGTGAAGAGAATTCTAATACCCCTTTTGATTTTGGAATATTTTTGGATTCCCTAAAAAATGGTATCACTGGGGATATACATTTTGGAACGAAGTTATCTTACTGTTTTTGGTGGGGATTGCGAAATCTAAGGTTTGCTTATTATATGCATGGAAATTCAACTATTACATTTATGTCCATGGAGACTCAAAAATGGGAGGACATAAGAAACAAGATACAATTGAAAGAGAAAGATATAGCAGGATGGATAGACAGAAATGAGCTCCCAGACAAAATGAAGAAAGAAATTATGAAGAACATAAAGCAAAAACTCGAACAGAACAAAGATGCTGATCTTGAGAATCTTTTCTCTATTCTTCCGACATATACCAAAAAATGTCTGAAGCGTTTCCTCGGCATGAAACTGCTAAAGAAAGTACCGAAGCTTGCAAGGATGGATGAAAGAGTGTTGGAAATTATATGTGACTATCTAAAGCCAGTGATGTATGCCGAGGACACCGTGGTTTTACAAATGGGAGATCCACTACGTAGGATGCTACTCATTACAGAAGGCACATTATTAACCCATAGAACTACCAGTAATGATAGTCATGTTGCAACTGAAAACGCAAAAACGGGTAGTATTTCAAGTTCCCCGTCAGTGGGCAACCTTGACAAAGGTGACTTTTACGGCGCCGAAGAACTGATCGAGTGGGCGACACAAAAGAAGGATTTAGGCCAGCTTCCCTGCTCTTCCTTCAATGTGAAATGCGATTCGAAAGTAGAAGGCTTTGTTCTCACAGCTAGGGACTTGAGATGTGTAGTTTCCAAAAACGAAAATTGGTGGAAATTTGGCATTAGCAAGTCAGACCACAGCATATGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
Ion_trans

Protein Analysis

621

Amino Acids

71.23

Weight (kDa)

8.64

Isoelectric Point (pI)

40.78

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000119)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g10570 FvH4_4g36390 FvH4_7g31840 FvH4_7g31840 FvH4_7g31850 FvH4_7g31850 FvH4_7g31861 FvH4_7g31861 FvH4_7g31950
malus_domestica MD01G1054600.v1.1 MD01G1221100.v1.1 MD01G1221400.v1.1 MD01G1221600.v1.1 MD01G1221800.v1.1 MD01G1222000.v1.1 MD01G1222100.v1.1 MD07G1140800.v1.1 MD07G1291200.v1.1 MD07G1291400.v1.1 MD07G1291500.v1.1 MD07G1291700.v1.1 MD07G1292500.v1.1 MD07G1292700.v1.1 MD07G1292800.v1.1 MD07G1292900.v1.1 MD08G1241600.v1.1 MD11G1083800.v1.1 MD15G1431600.v1.1
prunus_persica Prupe.1G017800_v2.0.a1 Prupe.1G017800_v2.0.a1 Prupe.1G162800_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312700_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G143000_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1
pyrus_communis pycom01g23050 pycom01g23070 pycom01g23090 pycom01g23100 pycom01g23110 pycom01g23120 pycom01g23170 pycom07g26410 pycom07g26440 pycom07g26470 pycom07g26480 pycom07g26490 pycom07g26500 pycom07g26510 pycom07g26530 pycom07g26540 pycom07g26570 pycom07g26580 pycom07g26590 pycom08g20940
rosa_chinensis RchiOBHm_Chr1g0324571 RchiOBHm_Chr1g0336181 RchiOBHm_Chr1g0381061 RchiOBHm_Chr1g0381091 RchiOBHm_Chr1g0381121 RchiOBHm_Chr1g0381131 RchiOBHm_Chr1g0381141 RchiOBHm_Chr1g0381161 RchiOBHm_Chr1g0381211 RchiOBHm_Chr2g0110361 RchiOBHm_Chr2g0120231 RchiOBHm_Chr3g0486281 RchiOBHm_Chr3g0486311 RchiOBHm_Chr3g0486401 RchiOBHm_Chr4g0409511 RchiOBHm_Chr4g0409521 RchiOBHm_Chr5g0017271 RchiOBHm_Chr5g0048781 RchiOBHm_Chr5g0048811
rosa_laevigata RLG00000002401 RLG00000008559 RLG00000017798 RLG00000017799 RLG00000023082 RLG00000023088 RLG00000026230 RLG00000026238 RLG00000026240 RLG00000026241 RLG00000026242 RLG00000026243 RLG00000026244 RLG00000026246 RLG00000026247 RLG00000026248 RLG00000029876 RLG00000030189 RLG00000034579
rosa_multiflora Rmu_co8101374.1_g000001 Rmu_co8309149.1_g000001 Rmu_co8450063.1_g000001 Rmu_sc0000441.1_g000094 Rmu_sc0000479.1_g000005 Rmu_sc0000647.1_g000006 Rmu_sc0001393.1_g000031 Rmu_sc0001423.1_g000037 Rmu_sc0001616.1_g000015 Rmu_sc0001857.1_g000011 Rmu_sc0002183.1_g000013 Rmu_sc0002183.1_g000028 Rmu_sc0002183.1_g000030 Rmu_sc0002688.1_g000003 Rmu_sc0002688.1_g000020 Rmu_sc0003801.1_g000003 Rmu_sc0003801.1_g000004 Rmu_sc0004125.1_g000006 Rmu_sc0004494.1_g000005 Rmu_sc0004494.1_g000006 Rmu_sc0004494.1_g000008 Rmu_sc0004494.1_g000009 Rmu_sc0005842.1_g000004 Rmu_sc0006872.1_g000001 Rmu_sc0006872.1_g000005 Rmu_sc0006872.1_g000009 Rmu_sc0006872.1_g000010 Rmu_sc0008053.1_g000026
rosa_roxburghii Rroxscaffold_159G00432960 Rroxscaffold_1G00033060 Rroxscaffold_2G00123150 Rroxscaffold_2G00123170 Rroxscaffold_2G00133500 Rroxscaffold_2G00133550 Rroxscaffold_4G00278650 Rroxscaffold_4G00278750 Rroxscaffold_4G00278790 Rroxscaffold_4G00278800 Rroxscaffold_4G00278810 Rroxscaffold_4G00325390 Rroxscaffold_5G00354010 Rroxscaffold_6G00395890 Rroxscaffold_6G00395900 Rroxscaffold_6G00395920
rosa_rugosa Rorug01G0046900.1 Rorug01G0427000 Rorug01G0427100 Rorug01G0427200 Rorug01G0427300 Rorug01G0427400 Rorug01G0427500 Rorug01G0427500 Rorug01G0427600 Rorug01G0427600 Rorug01G0427700 Rorug01G0427700 Rorug01G0427800 Rorug01G0428700 Rorug02G0166400 Rorug02G0166500 Rorug02G0166500 Rorug02G0166600 Rorug02G0166600 Rorug02G0166700 Rorug02G0167300 Rorug02G0167300 Rorug02G0167300 Rorug03G0224600 Rorug03G0224600 Rorug04G0094400 Rorug05G0241100 Rorug05G0241200
rosa_samantha Rh1BG407700 Rh1BG407900 Rh1BG409000 Rh1CG064700 Rh1CG420900 Rh1CG421000 Rh1CG421200 Rh1CG421300 Rh1CG421800 Rh1CG421900 Rh1CG422000 Rh1CG422200 Rh1CG422300 Rh1CG423600 Rh1DG437600 Rh1DG438900 Rh1DG439000 Rh1DG440300 Rh2AG219100 Rh2CG220700 Rh2DG225300 Rh3AG274400 Rh3AG274600 Rh3CG308900 Rh3DG305800 Rh4AG156400 Rh5AG129000 Rh5AG320900 Rh5CG139600
rosa_wichuraiana Rw1G005300 Rw1G039280 Rw1G039300 Rw1G039310 Rw1G039320 Rw1G039330 Rw1G039340 Rw1G039360 Rw1G039390 Rw2G016910 Rw2G022800 Rw3G024330 Rw3G024340 Rw3G024350 Rw3G024400 Rw4G012810 Rw5G030120 Rw5G030280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 879, 1670
AccI GTMKAC 1 cut(s) 363
AccII CGCG 1 cut(s) 885
AciI CCGC 3 cut(s) 50, 182, 883
AclWI GGATC 3 cut(s) 182, 734, 1511
AcsI RAATTY 5 cut(s) 515, 735, 1009, 1153, 1826
AcuI CTGAAG 1 cut(s) 1400
AcyI GRCGYC 1 cut(s) 1671
AfaI GTAC 6 cut(s) 155, 467, 474, 845, 928, 1416
AfiI CCNNNNNNNGG 3 cut(s) 998, 1639, 1640
AgsI TTSAA 8 cut(s) 219, 652, 860, 914, 1158, 1222, 1626, 1738
AluBI AGCT 9 cut(s) 37, 536, 608, 788, 836, 1261, 1423, 1720, 1781
AluI AGCT 9 cut(s) 37, 536, 608, 788, 836, 1261, 1423, 1720, 1781
Alw21I GWGCWC 3 cut(s) 14, 39, 1263
Alw26I GTCTC 3 cut(s) 76, 304, 1175
AlwI GGATC 3 cut(s) 182, 734, 1511
AlwNI CAGNNNCTG 1 cut(s) 536
AoxI GGCC 2 cut(s) 661, 1714
ApeKI GCWGC 1 cut(s) 533
ApoI RAATTY 5 cut(s) 515, 735, 1009, 1153, 1826
AsiSI GCGATCGC 1 cut(s) 401
Asp700I GAANNNNTTC 3 cut(s) 243, 1343, 1385
AspLEI GCGC 3 cut(s) 178, 887, 1673
AsuHPI GGTGA 2 cut(s) 1013, 1670
AsuII TTCGAA 2 cut(s) 521, 1754
BanI GGYRCC 2 cut(s) 879, 1670
BanII GRGCYC 2 cut(s) 39, 1263
BarI GAAGNNNNNNTAC 2 cut(s) 1082, 1114
BbsI GAAGAC 1 cut(s) 637
Bbv12I GWGCWC 3 cut(s) 14, 39, 1263
BbvI GCAGC 1 cut(s) 545
BccI CCATC 2 cut(s) 1236, 1426
BceAI ACGGC 2 cut(s) 437, 1684
BciVI GTATCC 1 cut(s) 662
BcoDI GTCTC 3 cut(s) 76, 304, 1175
BfaI CTAG 3 cut(s) 635, 1782, 1861
BfmI CTRYAG 1 cut(s) 381
BfoI RGCGCY 1 cut(s) 1674
BfuI GTATCC 1 cut(s) 662
BisI GCNGC 1 cut(s) 534
BlsI GCNGC 1 cut(s) 535
BmiI GGNNCC 2 cut(s) 881, 1672
BmrI ACTGGG 1 cut(s) 1077
BmsI GCATC 7 cut(s) 144, 199, 400, 451, 512, 1315, 1521
BmuI ACTGGG 1 cut(s) 1077
BpiI GAAGAC 1 cut(s) 637
Bpu14I TTCGAA 2 cut(s) 521, 1754
BpuEI CTTGAG 3 cut(s) 23, 1355, 1810
BsaAI YACGTR 1 cut(s) 1526
BsaBI GATNNNNATC 2 cut(s) 62, 1329
BsaHI GRCGYC 1 cut(s) 1671
BsaJI CCNNGG 6 cut(s) 664, 722, 1176, 1390, 1488, 1497
Bsc4I CCNNNNNNNGG 3 cut(s) 998, 1639, 1640
Bse1I ACTGG 5 cut(s) 329, 775, 1072, 1475, 1575
Bse8I GATNNNNATC 2 cut(s) 62, 1329
BseDI CCNNGG 6 cut(s) 664, 722, 1176, 1390, 1488, 1497
BseGI GGATG 5 cut(s) 24, 1247, 1437, 1441, 1536
BseJI GATNNNNATC 2 cut(s) 62, 1329
BseLI CCNNNNNNNGG 3 cut(s) 998, 1639, 1640
BseMII CTCAG 2 cut(s) 528, 764
BseNI ACTGG 5 cut(s) 329, 775, 1072, 1475, 1575
BseRI GAGGAG 1 cut(s) 695
BseXI GCAGC 1 cut(s) 545
BseYI CCCAGC 1 cut(s) 566
Bsh1236I CGCG 1 cut(s) 885
Bsh1285I CGRYCG 1 cut(s) 401
BshFI GGCC 2 cut(s) 663, 1716
BshNI GGYRCC 2 cut(s) 879, 1670
BsiEI CGRYCG 1 cut(s) 401
BsiHKAI GWGCWC 3 cut(s) 14, 39, 1263
BslFI GGGAC 1 cut(s) 1799
BslI CCNNNNNNNGG 3 cut(s) 998, 1639, 1640
BsmAI GTCTC 3 cut(s) 76, 304, 1175
BsmFI GGGAC 1 cut(s) 1799
BsnI GGCC 2 cut(s) 663, 1716
Bsp119I TTCGAA 2 cut(s) 521, 1754
Bsp1286I GDGCHC 3 cut(s) 14, 39, 1263
Bsp143I GATC 8 cut(s) 83, 187, 202, 398, 726, 1330, 1516, 1683
Bsp19I CCATGG 2 cut(s) 664, 1176
BspACI CCGC 3 cut(s) 50, 182, 883
BspANI GGCC 2 cut(s) 663, 1716
BspCNI CTCAG 2 cut(s) 529, 763
BspFNI CGCG 1 cut(s) 885
BspLI GGNNCC 2 cut(s) 881, 1672
BspPI GGATC 3 cut(s) 182, 734, 1511
BspQI GCTCTTC 1 cut(s) 1735
BspT104I TTCGAA 2 cut(s) 521, 1754
BspT107I GGYRCC 2 cut(s) 879, 1670
BsrI ACTGG 5 cut(s) 329, 775, 1072, 1475, 1575
BssECI CCNNGG 6 cut(s) 664, 722, 1176, 1390, 1488, 1497
BssMI GATC 8 cut(s) 83, 187, 202, 398, 726, 1330, 1516, 1683
BssNI GRCGYC 1 cut(s) 1671
BssT1I CCWWGG 3 cut(s) 664, 722, 1176
Bst4CI ACNGT 4 cut(s) 16, 158, 1103, 1498
Bst6I CTCTTC 2 cut(s) 999, 1735
BstACI GRCGYC 1 cut(s) 1671
BstBAI YACGTR 1 cut(s) 1526
BstBI TTCGAA 2 cut(s) 521, 1754
BstC8I GCNNGC 2 cut(s) 1425, 1718
BstDEI CTNAG 3 cut(s) 537, 750, 1127
BstDSI CCRYGG 3 cut(s) 664, 1176, 1497
BstF5I GGATG 5 cut(s) 24, 1247, 1437, 1441, 1536
BstFNI CGCG 1 cut(s) 885
BstH2I RGCGCY 1 cut(s) 1674
BstHHI GCGC 3 cut(s) 178, 887, 1673
BstKTI GATC 8 cut(s) 86, 190, 205, 401, 729, 1333, 1519, 1686
BstMAI GTCTC 3 cut(s) 76, 304, 1175
BstMBI GATC 8 cut(s) 83, 187, 202, 398, 726, 1330, 1516, 1683
BstMCI CGRYCG 1 cut(s) 401
BstMWI GCNNNNNNNGC 2 cut(s) 49, 628
BstNSI RCATGY 2 cut(s) 288, 891
BstSFI CTRYAG 1 cut(s) 381
BstSNI TACGTA 1 cut(s) 1526
BstUI CGCG 1 cut(s) 885
BstV1I GCAGC 1 cut(s) 545
BstV2I GAAGAC 1 cut(s) 637
BstX2I RGATCY 3 cut(s) 187, 726, 1516
BstYI RGATCY 3 cut(s) 187, 726, 1516
BsuI GTATCC 1 cut(s) 662
BsuRI GGCC 2 cut(s) 663, 1716
BtgI CCRYGG 3 cut(s) 664, 1176, 1497
BtgZI GCGATG 1 cut(s) 20
BtsCI GGATG 5 cut(s) 24, 1247, 1437, 1441, 1536
BtsIMutI CAGTG 4 cut(s) 405, 1065, 1482, 1644
Cac8I GCNNGC 2 cut(s) 1425, 1718
CaiI CAGNNNCTG 1 cut(s) 536
CfoI GCGC 3 cut(s) 178, 887, 1673
Csp6I GTAC 6 cut(s) 154, 466, 473, 844, 927, 1415
CviQI GTAC 6 cut(s) 154, 466, 473, 844, 927, 1415
DdeI CTNAG 3 cut(s) 537, 750, 1127
DinI GGCGCC 1 cut(s) 1672
DpnI GATC 8 cut(s) 85, 189, 204, 400, 728, 1332, 1518, 1685
DpnII GATC 8 cut(s) 83, 187, 202, 398, 726, 1330, 1516, 1683
Eam1104I CTCTTC 2 cut(s) 999, 1735
EarI CTCTTC 2 cut(s) 999, 1735
EciI GGCGGA 1 cut(s) 39
Ecl136II GAGCTC 2 cut(s) 37, 1261
Eco105I TACGTA 1 cut(s) 1526
Eco130I CCWWGG 3 cut(s) 664, 722, 1176
Eco24I GRGCYC 2 cut(s) 39, 1263
Eco32I GATATC 1 cut(s) 92
Eco53kI GAGCTC 2 cut(s) 37, 1261
Eco57I CTGAAG 1 cut(s) 1400
EcoICRI GAGCTC 2 cut(s) 37, 1261
EcoRI GAATTC 1 cut(s) 1009
EcoRV GATATC 1 cut(s) 92
EcoT14I CCWWGG 3 cut(s) 664, 722, 1176
EcoT22I ATGCAT 1 cut(s) 1149
EcoT38I GRGCYC 2 cut(s) 39, 1263
EgeI GGCGCC 1 cut(s) 1672
EheI GGCGCC 1 cut(s) 1672
ErhI CCWWGG 3 cut(s) 664, 722, 1176
FalI AAGNNNNNCTT 4 cut(s) 228, 260, 1120, 1152
FaqI GGGAC 1 cut(s) 1799
FauNDI CATATG 1 cut(s) 1856
FblI GTMKAC 1 cut(s) 363
Fnu4HI GCNGC 1 cut(s) 534
FokI GGATG 5 cut(s) 11, 1254, 1444, 1448, 1543
FriOI GRGCYC 2 cut(s) 39, 1263
Fsp4HI GCNGC 1 cut(s) 534
FspBI CTAG 3 cut(s) 635, 1782, 1861
GlaI GCGC 3 cut(s) 177, 886, 1672
GluI GCNGC 1 cut(s) 534
GsaI CCCAGC 1 cut(s) 570
HaeII RGCGCY 1 cut(s) 1674
HaeIII GGCC 2 cut(s) 663, 1716
HhaI GCGC 3 cut(s) 178, 887, 1673
Hin1I GRCGYC 1 cut(s) 1671
Hin6I GCGC 3 cut(s) 176, 885, 1671
HinP1I GCGC 3 cut(s) 176, 885, 1671
HincII GTYRAC 1 cut(s) 457
HindII GTYRAC 1 cut(s) 457
HindIII AAGCTT 1 cut(s) 1421
HinfI GANTC 6 cut(s) 63, 688, 1046, 1183, 1339, 1751
HpaI GTTAAC 1 cut(s) 457
HphI GGTGA 2 cut(s) 1013, 1670
Hpy166II GTNNAC 3 cut(s) 364, 457, 475
Hpy188I TCNGA 6 cut(s) 493, 508, 753, 1359, 1380, 1846
Hpy188III TCNNGA 4 cut(s) 87, 206, 262, 1334
Hpy8I GTNNAC 3 cut(s) 364, 457, 475
Hpy99I CGWCG 1 cut(s) 20
HpyAV CCTTC 4 cut(s) 1541, 1699, 1744, 1757
HpyCH4III ACNGT 4 cut(s) 16, 158, 1103, 1498
HpyCH4IV ACGT 2 cut(s) 696, 1525
HpyF10VI GCNNNNNNNGC 2 cut(s) 49, 628
HpyF3I CTNAG 3 cut(s) 537, 750, 1127
HpySE526I ACGT 2 cut(s) 696, 1525
Hsp92I GRCGYC 1 cut(s) 1671
HspAI GCGC 3 cut(s) 176, 885, 1671
KasI GGCGCC 1 cut(s) 1670
KspAI GTTAAC 1 cut(s) 457
Kzo9I GATC 8 cut(s) 83, 187, 202, 398, 726, 1330, 1516, 1683
LguI GCTCTTC 1 cut(s) 1735
LmnI GCTCC 4 cut(s) 34, 676, 833, 1266
Lsp1109I GCAGC 1 cut(s) 545
LweI GCATC 7 cut(s) 144, 199, 400, 451, 512, 1315, 1521
MaeI CTAG 3 cut(s) 635, 1782, 1861
MaeII ACGT 2 cut(s) 696, 1525
MaeIII GTNAC 3 cut(s) 944, 1460, 1658
MalI GATC 8 cut(s) 85, 189, 204, 400, 728, 1332, 1518, 1685
MboI GATC 8 cut(s) 83, 187, 202, 398, 726, 1330, 1516, 1683
MfeI CAATTG 2 cut(s) 983, 1217
MflI RGATCY 3 cut(s) 187, 726, 1516
MhlI GDGCHC 3 cut(s) 14, 39, 1263
Mly113I GGCGCC 1 cut(s) 1671
MlyI GAGTC 1 cut(s) 1177
MmeI TCCRAC 2 cut(s) 1382, 1428
Mph1103I ATGCAT 1 cut(s) 1149
MroXI GAANNNNTTC 3 cut(s) 243, 1343, 1385
MseI TTAA 3 cut(s) 456, 795, 1559
MspA1I CMGCKG 1 cut(s) 536
MunI CAATTG 2 cut(s) 983, 1217
MvnI CGCG 1 cut(s) 885
MwoI GCNNNNNNNGC 2 cut(s) 49, 628
NarI GGCGCC 1 cut(s) 1671
NcoI CCATGG 2 cut(s) 664, 1176
NdeI CATATG 1 cut(s) 1856
NdeII GATC 8 cut(s) 83, 187, 202, 398, 726, 1330, 1516, 1683
NlaIV GGNNCC 2 cut(s) 881, 1672
NmeAIII GCCGAG 2 cut(s) 1371, 1513
NmuCI GTSAC 3 cut(s) 944, 1460, 1658
NsiI ATGCAT 1 cut(s) 1149
NspI RCATGY 2 cut(s) 288, 891
NspV TTCGAA 2 cut(s) 521, 1754
PciSI GCTCTTC 1 cut(s) 1735
PdmI GAANNNNTTC 3 cut(s) 243, 1343, 1385
PfeI GAWTC 5 cut(s) 63, 688, 1046, 1339, 1751
PkrI GCNGC 1 cut(s) 535
Ple19I CGATCG 1 cut(s) 401
PleI GAGTC 1 cut(s) 1177
PluTI GGCGCC 1 cut(s) 1674
PpsI GAGTC 1 cut(s) 1177
Ppu21I YACGTR 1 cut(s) 1526
Psp124BI GAGCTC 2 cut(s) 39, 1263
PspFI CCCAGC 1 cut(s) 566
PspN4I GGNNCC 2 cut(s) 881, 1672
PsrI GAACNNNNNNTAC 2 cut(s) 1612, 1644
PstNI CAGNNNCTG 1 cut(s) 536
PsuI RGATCY 3 cut(s) 187, 726, 1516
PvuI CGATCG 1 cut(s) 401
PvuII CAGCTG 1 cut(s) 536
RgaI GCGATCGC 1 cut(s) 401
RsaI GTAC 6 cut(s) 155, 467, 474, 845, 928, 1416
RsaNI GTAC 6 cut(s) 154, 466, 473, 844, 927, 1415
SacI GAGCTC 2 cut(s) 39, 1263
SapI GCTCTTC 1 cut(s) 1735
SaqAI TTAA 3 cut(s) 456, 795, 1559
SatI GCNGC 1 cut(s) 534
Sau3AI GATC 8 cut(s) 83, 187, 202, 398, 726, 1330, 1516, 1683
SchI GAGTC 1 cut(s) 1177
SduI GDGCHC 3 cut(s) 14, 39, 1263
SfaAI GCGATCGC 1 cut(s) 401
SfaNI GCATC 7 cut(s) 144, 199, 400, 451, 512, 1315, 1521
SfcI CTRYAG 1 cut(s) 381
SfoI GGCGCC 1 cut(s) 1672
SfuI TTCGAA 2 cut(s) 521, 1754
SgfI GCGATCGC 1 cut(s) 401
SmlI CTYRAG 3 cut(s) 38, 1334, 1789
SmoI CTYRAG 3 cut(s) 38, 1334, 1789
SnaBI TACGTA 1 cut(s) 1526
SsiI CCGC 3 cut(s) 50, 182, 883
SspDI GGCGCC 1 cut(s) 1670
SspI AATATT 1 cut(s) 1038
SspMI CTAG 3 cut(s) 635, 1782, 1861
SstI GAGCTC 2 cut(s) 39, 1263
StyI CCWWGG 3 cut(s) 664, 722, 1176
TaaI ACNGT 4 cut(s) 16, 158, 1103, 1498
TaiI ACGT 2 cut(s) 699, 1528
TaqI TCGA 8 cut(s) 82, 162, 205, 521, 733, 1311, 1686, 1754
TatI WGTACW 2 cut(s) 153, 472
TfiI GAWTC 5 cut(s) 63, 688, 1046, 1339, 1751
Tru1I TTAA 3 cut(s) 456, 795, 1559
Tru9I TTAA 3 cut(s) 456, 795, 1559
TscAI CASTG 4 cut(s) 412, 1072, 1482, 1644
TseFI GTSAC 3 cut(s) 944, 1460, 1658
TseI GCWGC 1 cut(s) 533
Tsp45I GTSAC 3 cut(s) 944, 1460, 1658
TspDTI ATGAA 8 cut(s) 246, 265, 354, 510, 1289, 1304, 1412, 1452
TspRI CASTG 4 cut(s) 412, 1072, 1482, 1644
XapI RAATTY 5 cut(s) 515, 735, 1009, 1153, 1826
XceI RCATGY 2 cut(s) 288, 891
XmiI GTMKAC 1 cut(s) 363
XmnI GAANNNNTTC 3 cut(s) 243, 1343, 1385
XspI CTAG 3 cut(s) 635, 1782, 1861
Zsp2I ATGCAT 1 cut(s) 1149
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.