RchiOBHm_Chr1g0381091

Cyclic nucleotide-gated ion channel 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0000119
Physical Location & Seq
Reverse (-)
66472219 .. 66474758
2540 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ60429

Sequence Viewer

Length: 1836 bp
ATGACAGCTGGTCACAATACTCATTCTGAATACGACCGGAGACAATCAGAACTGAAAAAAAACAAAAGCAGAATTAGTTCGTGGTGGACTAGTTTATGGGTTCGAGGTACATGGTGGGATTCGATATTTGTAGCCTCGTGTGTTATCGCAGTCTCACTGGATCCACTGTTCTTTTACATTCCTATCATCGATAGGGAAAAAAAGTGCCTTCAAGCAGACAGACAATTGAGGACTGTAACTCTCATTTTGCGATCAGTGATGGATATCACTTTTATAGTGCATATTATCTATCAGATTCGTGAAGCTATGATCGCTGCAGCCCTCGATAAGATGGCTAAACCGAAGTCTTCCGATTTCTTTAAAGGACCCTTCTTTAAACGTGTCGGTGCAATAGTTGACAATTTGTCATGGCGCTCTCTCATAACTGACATTCTAGCTGTTCTTCCTATCCCACAGGTGCTACTACTTGTTGTCTTCTTTAAAATGAGAGGCTCTGGATATTTGAACCACAGAAAGATTTTGAATTTCTTTCTTCTCCTTCAATATTTGGCAAGAATTTATCGTATTCACCTATCTTCCAAAAAACTTACAAAGAGTCATGGAATATGGATTAAAGGACTATTCAATTTATTTCTCTATATCTTTGCAAGTCACGTACTTGGAGCCTTTTGGTATTTCTTTTCGATTCAACGAGAGACATCATGTTGGCATCGAAGTTGCGGTCCCAACTGTATAAGTACCTTTTATTGTGATGAGTACAAACATTCAGACGATATGGTGACACTTATAACATCTCTGAATGCATCGTGCCCTATCAATACTACTGGACCATTTGATTTTGGAATATTTCTTGATTCTCTAAAGTCCAATAACCCGGCATCAATCAACTTTCCACAAAAGTTGTGTTACTCTTTTTGGTGGGGTCTACGAAATTTGAGTAATTTTGGCACGAATCTTGTAACAAGTAACTATGTATGGGAGAATTTATTCGCAATTCTTATTTCTATCATTGGCTTGTTACTGTTTTTGTACCTCATCGGAAATGTGCAGACATTTATGTCTATGGGAACTGCAAAGTCAGAGGAGATAAGAAGGAAGATCAAATCAAAAAAGCAAGTTATGAAAGAGTGGATGGAGAAAAATTGCCTCCCTGCTAAGTTGAGGAAAGAAATCATGGCAAATATAAGAGAAAAATTAGAACAAGACAACCATGCTGACATGGGGGATCCGTACTCCATTCTTCCCTCGTCAACCAAAAAATCTCTAAAGCGTGCTCTCTGCATGAGTACACTGAGAAAAGTACCAAGGCTTGAAGGTATGAATCCAAAAGTTTTGAAAATGATATGTGACTATCTGAAGCCTGTGACATACCCTGAGCATCACTATGTTGCCAAGGTGGATGAACCAGTTGATCAGATGGTGCTTGTCAAAGAAGGAACTATGTGGATCTACTCGTCGAATACTAGTACTCCATCCAAGATCCACAGGACGGTTGAGAACGGTGGCATTTATGGAGATGAACAACTTCTGAGTTGGGCGTCGAAGGACATGCAACACGTCTCGTTTGAAAACTTCCCGATCTCAAAAGAAAATGTGAAATGTCATACAAAAGTGGAAGGGTTTGCTATCGCGGCCAAGGACTTGAAAGATGTGGCCACCAAGTGCAAAATGTTTTGGAATTACGATGATCCTCGAGAGGAGAGGGTGGCGAGCTCTACCATAGGAAGGACATTCCGTCGAAACCGCAATAACCCAAATAGGCCGGCTACCGTAGGAGTAGGAGCTGCGACCTCGTCAAGAACAGGAATTGAGTATCTGCAGATCGAGAGAACCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
Ion_trans

Protein Analysis

611

Amino Acids

70.43

Weight (kDa)

9.52

Isoelectric Point (pI)

40.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ion_trans PF00520 37 - 356 1.3e-11 Ion transport protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000119)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g10570 FvH4_4g36390 FvH4_7g31840 FvH4_7g31840 FvH4_7g31850 FvH4_7g31850 FvH4_7g31861 FvH4_7g31861 FvH4_7g31950
malus_domestica MD01G1054600.v1.1 MD01G1221100.v1.1 MD01G1221400.v1.1 MD01G1221600.v1.1 MD01G1221800.v1.1 MD01G1222000.v1.1 MD01G1222100.v1.1 MD07G1140800.v1.1 MD07G1291200.v1.1 MD07G1291400.v1.1 MD07G1291500.v1.1 MD07G1291700.v1.1 MD07G1292500.v1.1 MD07G1292700.v1.1 MD07G1292800.v1.1 MD07G1292900.v1.1 MD08G1241600.v1.1 MD11G1083800.v1.1 MD15G1431600.v1.1
prunus_persica Prupe.1G017800_v2.0.a1 Prupe.1G017800_v2.0.a1 Prupe.1G162800_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312700_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G143000_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1
pyrus_communis pycom01g23050 pycom01g23070 pycom01g23090 pycom01g23100 pycom01g23110 pycom01g23120 pycom01g23170 pycom07g26410 pycom07g26440 pycom07g26470 pycom07g26480 pycom07g26490 pycom07g26500 pycom07g26510 pycom07g26530 pycom07g26540 pycom07g26570 pycom07g26580 pycom07g26590 pycom08g20940
rosa_chinensis RchiOBHm_Chr1g0324571 RchiOBHm_Chr1g0336181 RchiOBHm_Chr1g0381061 RchiOBHm_Chr1g0381091 RchiOBHm_Chr1g0381121 RchiOBHm_Chr1g0381131 RchiOBHm_Chr1g0381141 RchiOBHm_Chr1g0381161 RchiOBHm_Chr1g0381211 RchiOBHm_Chr2g0110361 RchiOBHm_Chr2g0120231 RchiOBHm_Chr3g0486281 RchiOBHm_Chr3g0486311 RchiOBHm_Chr3g0486401 RchiOBHm_Chr4g0409511 RchiOBHm_Chr4g0409521 RchiOBHm_Chr5g0017271 RchiOBHm_Chr5g0048781 RchiOBHm_Chr5g0048811
rosa_laevigata RLG00000002401 RLG00000008559 RLG00000017798 RLG00000017799 RLG00000023082 RLG00000023088 RLG00000026230 RLG00000026238 RLG00000026240 RLG00000026241 RLG00000026242 RLG00000026243 RLG00000026244 RLG00000026246 RLG00000026247 RLG00000026248 RLG00000029876 RLG00000030189 RLG00000034579
rosa_multiflora Rmu_co8101374.1_g000001 Rmu_co8309149.1_g000001 Rmu_co8450063.1_g000001 Rmu_sc0000441.1_g000094 Rmu_sc0000479.1_g000005 Rmu_sc0000647.1_g000006 Rmu_sc0001393.1_g000031 Rmu_sc0001423.1_g000037 Rmu_sc0001616.1_g000015 Rmu_sc0001857.1_g000011 Rmu_sc0002183.1_g000013 Rmu_sc0002183.1_g000028 Rmu_sc0002183.1_g000030 Rmu_sc0002688.1_g000003 Rmu_sc0002688.1_g000020 Rmu_sc0003801.1_g000003 Rmu_sc0003801.1_g000004 Rmu_sc0004125.1_g000006 Rmu_sc0004494.1_g000005 Rmu_sc0004494.1_g000006 Rmu_sc0004494.1_g000008 Rmu_sc0004494.1_g000009 Rmu_sc0005842.1_g000004 Rmu_sc0006872.1_g000001 Rmu_sc0006872.1_g000005 Rmu_sc0006872.1_g000009 Rmu_sc0006872.1_g000010 Rmu_sc0008053.1_g000026
rosa_roxburghii Rroxscaffold_159G00432960 Rroxscaffold_1G00033060 Rroxscaffold_2G00123150 Rroxscaffold_2G00123170 Rroxscaffold_2G00133500 Rroxscaffold_2G00133550 Rroxscaffold_4G00278650 Rroxscaffold_4G00278750 Rroxscaffold_4G00278790 Rroxscaffold_4G00278800 Rroxscaffold_4G00278810 Rroxscaffold_4G00325390 Rroxscaffold_5G00354010 Rroxscaffold_6G00395890 Rroxscaffold_6G00395900 Rroxscaffold_6G00395920
rosa_rugosa Rorug01G0046900.1 Rorug01G0427000 Rorug01G0427100 Rorug01G0427200 Rorug01G0427300 Rorug01G0427400 Rorug01G0427500 Rorug01G0427500 Rorug01G0427600 Rorug01G0427600 Rorug01G0427700 Rorug01G0427700 Rorug01G0427800 Rorug01G0428700 Rorug02G0166400 Rorug02G0166500 Rorug02G0166500 Rorug02G0166600 Rorug02G0166600 Rorug02G0166700 Rorug02G0167300 Rorug02G0167300 Rorug02G0167300 Rorug03G0224600 Rorug03G0224600 Rorug04G0094400 Rorug05G0241100 Rorug05G0241200
rosa_samantha Rh1BG407700 Rh1BG407900 Rh1BG409000 Rh1CG064700 Rh1CG420900 Rh1CG421000 Rh1CG421200 Rh1CG421300 Rh1CG421800 Rh1CG421900 Rh1CG422000 Rh1CG422200 Rh1CG422300 Rh1CG423600 Rh1DG437600 Rh1DG438900 Rh1DG439000 Rh1DG440300 Rh2AG219100 Rh2CG220700 Rh2DG225300 Rh3AG274400 Rh3AG274600 Rh3CG308900 Rh3DG305800 Rh4AG156400 Rh5AG129000 Rh5AG320900 Rh5CG139600
rosa_wichuraiana Rw1G005300 Rw1G039280 Rw1G039300 Rw1G039310 Rw1G039320 Rw1G039330 Rw1G039340 Rw1G039360 Rw1G039390 Rw2G016910 Rw2G022800 Rw3G024330 Rw3G024340 Rw3G024350 Rw3G024400 Rw4G012810 Rw5G030120 Rw5G030280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 788
AasI GACNNNNNNGTC 1 cut(s) 1057
AccI GTMKAC 1 cut(s) 925
AccII CGCG 1 cut(s) 1631
AciI CCGC 3 cut(s) 720, 1631, 1744
AclWI GGATC 7 cut(s) 155, 168, 1220, 1233, 1454, 1474, 1682
AcoI YGGCCR 2 cut(s) 1632, 1653
AcsI RAATTY 4 cut(s) 523, 555, 931, 982
AcuI CTGAAG 1 cut(s) 1376
AcyI GRCGYC 1 cut(s) 1538
AdeI CACNNNGTG 1 cut(s) 1662
AfaI GTAC 9 cut(s) 109, 657, 739, 758, 1031, 1232, 1288, 1302, 1468
AfiI CCNNNNNNNGG 2 cut(s) 1489, 1725
AflIII ACRYGT 2 cut(s) 379, 1555
AhdI GACNNNNNGTC 3 cut(s) 9, 403, 1734
AhlI ACTAGT 2 cut(s) 89, 1463
AjiI CACGTC 1 cut(s) 1558
AloI GAACNNNNNNTCC 2 cut(s) 152, 184
AluBI AGCT 5 cut(s) 8, 305, 437, 1713, 1784
AluI AGCT 5 cut(s) 8, 305, 437, 1713, 1784
Alw21I GWGCWC 2 cut(s) 1276, 1715
Alw26I GTCTC 4 cut(s) 34, 157, 689, 1564
AlwI GGATC 7 cut(s) 155, 168, 1220, 1233, 1454, 1474, 1682
Ama87I CYCGRG 1 cut(s) 1692
AoxI GGCC 3 cut(s) 1632, 1653, 1760
ApeKI GCWGC 3 cut(s) 314, 317, 1784
ApoI RAATTY 4 cut(s) 523, 555, 931, 982
ArsI GACNNNNNNTTYG 2 cut(s) 706, 738
Asp700I GAANNNNTTC 3 cut(s) 76, 986, 1524
AspLEI GCGC 1 cut(s) 414
AspS9I GGNCC 3 cut(s) 365, 722, 827
AsuC2I CCSGG 1 cut(s) 875
AsuHPI GGTGA 2 cut(s) 560, 790
AvaI CYCGRG 1 cut(s) 1692
AvaII GGWCC 3 cut(s) 365, 722, 827
BaeGI GKGCMC 1 cut(s) 812
BalI TGGCCA 1 cut(s) 1655
BamHI GGATCC 2 cut(s) 160, 1225
BanII GRGCYC 1 cut(s) 1715
BauI CACGAG 1 cut(s) 136
BbsI GAAGAC 2 cut(s) 339, 466
Bbv12I GWGCWC 2 cut(s) 1276, 1715
BbvI GCAGC 3 cut(s) 301, 329, 1771
BccI CCATC 5 cut(s) 253, 325, 1126, 1411, 1480
BcgI CGANNNNNNTGC 2 cut(s) 1531, 1565
BclI TGATCA 1 cut(s) 1411
BcnI CCSGG 1 cut(s) 875
BcoDI GTCTC 4 cut(s) 34, 157, 689, 1564
BcuI ACTAGT 2 cut(s) 89, 1463
BfaI CTAG 3 cut(s) 90, 434, 1464
BfmI CTRYAG 2 cut(s) 315, 1817
BfoI RGCGCY 1 cut(s) 415
BisI GCNGC 4 cut(s) 315, 318, 1632, 1785
BlsI GCNGC 4 cut(s) 316, 319, 1633, 1786
BmcAI AGTACT 1 cut(s) 1468
Bme1390I CCNGG 1 cut(s) 875
Bme18I GGWCC 3 cut(s) 365, 722, 827
BmeRI GACNNNNNGTC 3 cut(s) 9, 403, 1734
BmeT110I CYCGRG 1 cut(s) 1692
BmgBI CACGTC 1 cut(s) 1558
BmgT120I GGNCC 3 cut(s) 365, 722, 827
BmiI GGNNCC 5 cut(s) 162, 367, 664, 724, 1227
BmrFI CCNGG 1 cut(s) 875
BmsI GCATC 4 cut(s) 718, 812, 887, 1387
BpiI GAAGAC 2 cut(s) 339, 466
Bpu10I CCTNAGC 1 cut(s) 1374
BpuMI CCSGG 1 cut(s) 875
Bsa29I ATCGAT 1 cut(s) 189
BsaAI YACGTR 1 cut(s) 655
BsaBI GATNNNNATC 1 cut(s) 263
BsaHI GRCGYC 1 cut(s) 1538
BsaJI CCNNGG 3 cut(s) 1304, 1392, 1635
BsaWI WCCGGW 1 cut(s) 36
BsaXI ACNNNNNCTCC 2 cut(s) 1453, 1483
Bsc4I CCNNNNNNNGG 2 cut(s) 1489, 1725
Bse118I RCCGGY 1 cut(s) 1762
Bse1I ACTGG 3 cut(s) 162, 829, 1406
Bse8I GATNNNNATC 1 cut(s) 263
BseCI ATCGAT 1 cut(s) 189
BseDI CCNNGG 3 cut(s) 1304, 1392, 1635
BseGI GGATG 3 cut(s) 1137, 1405, 1472
BseJI GATNNNNATC 1 cut(s) 263
BseLI CCNNNNNNNGG 2 cut(s) 1489, 1725
BseMII CTCAG 3 cut(s) 1283, 1365, 1520
BseNI ACTGG 3 cut(s) 162, 829, 1406
BseRI GAGGAG 2 cut(s) 1097, 1712
BseSI GKGCMC 1 cut(s) 812
BseXI GCAGC 3 cut(s) 301, 329, 1771
BsgI GTGCAG 1 cut(s) 1067
Bsh1236I CGCG 1 cut(s) 1631
Bsh1285I CGRYCG 1 cut(s) 37
BshFI GGCC 3 cut(s) 1634, 1655, 1762
BshVI ATCGAT 1 cut(s) 189
BsiEI CGRYCG 1 cut(s) 37
BsiHKAI GWGCWC 2 cut(s) 1276, 1715
BsiHKCI CYCGRG 1 cut(s) 1692
BsiSI CCGG 3 cut(s) 37, 875, 1763
BslFI GGGAC 1 cut(s) 708
BslI CCNNNNNNNGG 2 cut(s) 1489, 1725
BsmAI GTCTC 4 cut(s) 34, 157, 689, 1564
BsmBI CGTCTC 1 cut(s) 1564
BsmFI GGGAC 1 cut(s) 708
BsmI GAATGC 1 cut(s) 805
BsnI GGCC 3 cut(s) 1634, 1655, 1762
BsoBI CYCGRG 1 cut(s) 1692
Bsp1286I GDGCHC 3 cut(s) 812, 1276, 1715
BspACI CCGC 3 cut(s) 720, 1631, 1744
BspANI GGCC 3 cut(s) 1634, 1655, 1762
BspCNI CTCAG 3 cut(s) 1284, 1366, 1521
BspDI ATCGAT 1 cut(s) 189
BspFNI CGCG 1 cut(s) 1631
BspLI GGNNCC 5 cut(s) 162, 367, 664, 724, 1227
BspMAI CTGCAG 2 cut(s) 319, 1821
BspPI GGATC 7 cut(s) 155, 168, 1220, 1233, 1454, 1474, 1682
BsrFI RCCGGY 1 cut(s) 1762
BsrI ACTGG 3 cut(s) 162, 829, 1406
BssAI RCCGGY 1 cut(s) 1762
BssECI CCNNGG 3 cut(s) 1304, 1392, 1635
BssNI GRCGYC 1 cut(s) 1538
BssSI CACGAG 1 cut(s) 136
BssT1I CCWWGG 3 cut(s) 1304, 1392, 1635
Bst2BI CACGAG 1 cut(s) 136
Bst4CI ACNGT 7 cut(s) 168, 235, 731, 1023, 1492, 1502, 1771
BstACI GRCGYC 1 cut(s) 1538
BstBAI YACGTR 1 cut(s) 655
BstC8I GCNNGC 3 cut(s) 1272, 1711, 1764
BstDEI CTNAG 4 cut(s) 1155, 1292, 1374, 1529
BstF5I GGATG 3 cut(s) 1137, 1405, 1472
BstFNI CGCG 1 cut(s) 1631
BstH2I RGCGCY 1 cut(s) 415
BstHHI GCGC 1 cut(s) 414
BstMAI GTCTC 4 cut(s) 34, 157, 689, 1564
BstMCI CGRYCG 1 cut(s) 37
BstMWI GCNNNNNNNGC 2 cut(s) 311, 1631
BstNSI RCATGY 1 cut(s) 1552
BstSCI CCNGG 1 cut(s) 873
BstSFI CTRYAG 2 cut(s) 315, 1817
BstSLI GKGCMC 1 cut(s) 812
BstUI CGCG 1 cut(s) 1631
BstV1I GCAGC 3 cut(s) 301, 329, 1771
BstV2I GAAGAC 2 cut(s) 339, 466
BstX2I RGATCY 4 cut(s) 160, 1225, 1446, 1479
BstYI RGATCY 4 cut(s) 160, 1225, 1446, 1479
Bsu15I ATCGAT 1 cut(s) 189
BsuRI GGCC 3 cut(s) 1634, 1655, 1762
BsuTUI ATCGAT 1 cut(s) 189
BtrI CACGTC 1 cut(s) 1558
BtsCI GGATG 3 cut(s) 1137, 1405, 1472
BtsIMutI CAGTG 4 cut(s) 155, 164, 261, 1289
Cac8I GCNNGC 3 cut(s) 1272, 1711, 1764
CfoI GCGC 1 cut(s) 414
Cfr10I RCCGGY 1 cut(s) 1762
Cfr13I GGNCC 3 cut(s) 365, 722, 827
ClaI ATCGAT 1 cut(s) 189
CseI GACGC 1 cut(s) 1527
Csp6I GTAC 9 cut(s) 108, 656, 738, 757, 1030, 1231, 1287, 1301, 1467
CspCI CAANNNNNGTGG 2 cut(s) 882, 917
CviAII CATG 9 cut(s) 111, 408, 599, 702, 1174, 1211, 1219, 1282, 1549
CviQI GTAC 9 cut(s) 108, 656, 738, 757, 1030, 1231, 1287, 1301, 1467
DdeI CTNAG 4 cut(s) 1155, 1292, 1374, 1529
DraI TTTAAA 3 cut(s) 361, 376, 481
DraIII CACNNNGTG 1 cut(s) 1662
DrdI GACNNNNNNGTC 1 cut(s) 1057
DriI GACNNNNNGTC 3 cut(s) 9, 403, 1734
DseDI GACNNNNNNGTC 1 cut(s) 1057
EaeI YGGCCR 2 cut(s) 1632, 1653
Eam1105I GACNNNNNGTC 3 cut(s) 9, 403, 1734
Ecl136II GAGCTC 1 cut(s) 1713
Eco130I CCWWGG 3 cut(s) 1304, 1392, 1635
Eco24I GRGCYC 1 cut(s) 1715
Eco32I GATATC 1 cut(s) 265
Eco47I GGWCC 3 cut(s) 365, 722, 827
Eco53kI GAGCTC 1 cut(s) 1713
Eco57I CTGAAG 1 cut(s) 1376
Eco88I CYCGRG 1 cut(s) 1692
EcoICRI GAGCTC 1 cut(s) 1713
EcoO109I RGGNCCY 1 cut(s) 365
EcoRV GATATC 1 cut(s) 265
EcoT14I CCWWGG 3 cut(s) 1304, 1392, 1635
EcoT22I ATGCAT 1 cut(s) 805
EcoT38I GRGCYC 1 cut(s) 1715
ErhI CCWWGG 3 cut(s) 1304, 1392, 1635
Esp3I CGTCTC 1 cut(s) 1564
FaeI CATG 9 cut(s) 114, 411, 602, 705, 1177, 1214, 1222, 1285, 1552
FaqI GGGAC 1 cut(s) 708
FatI CATG 9 cut(s) 110, 407, 598, 701, 1173, 1210, 1218, 1281, 1548
FbaI TGATCA 1 cut(s) 1411
FblI GTMKAC 1 cut(s) 925
Fnu4HI GCNGC 4 cut(s) 315, 318, 1632, 1785
FokI GGATG 3 cut(s) 1144, 1412, 1459
FriOI GRGCYC 1 cut(s) 1715
Fsp4HI GCNGC 4 cut(s) 315, 318, 1632, 1785
FspBI CTAG 3 cut(s) 90, 434, 1464
GlaI GCGC 1 cut(s) 413
GluI GCNGC 4 cut(s) 315, 318, 1632, 1785
HaeII RGCGCY 1 cut(s) 415
HaeIII GGCC 3 cut(s) 1634, 1655, 1762
HapII CCGG 3 cut(s) 37, 875, 1763
HgaI GACGC 1 cut(s) 1527
HhaI GCGC 1 cut(s) 414
Hin1I GRCGYC 1 cut(s) 1538
Hin1II CATG 9 cut(s) 114, 411, 602, 705, 1177, 1214, 1222, 1285, 1552
Hin6I GCGC 1 cut(s) 412
HinP1I GCGC 1 cut(s) 412
HincII GTYRAC 2 cut(s) 397, 1251
HindII GTYRAC 2 cut(s) 397, 1251
HinfI GANTC 7 cut(s) 119, 295, 595, 685, 854, 952, 1321
HpaII CCGG 3 cut(s) 37, 875, 1763
HphI GGTGA 2 cut(s) 560, 790
Hpy166II GTNNAC 5 cut(s) 87, 397, 926, 1251, 1289
Hpy188III TCNNGA 7 cut(s) 299, 495, 851, 1576, 1694, 1797, 1825
Hpy8I GTNNAC 5 cut(s) 87, 397, 926, 1251, 1289
Hpy99I CGWCG 3 cut(s) 1459, 1543, 1740
HpyAV CCTTC 9 cut(s) 218, 379, 548, 1086, 1307, 1427, 1537, 1610, 1719
HpyCH4III ACNGT 7 cut(s) 168, 235, 731, 1023, 1492, 1502, 1771
HpyCH4IV ACGT 3 cut(s) 379, 654, 1557
HpyF10VI GCNNNNNNNGC 2 cut(s) 311, 1631
HpyF3I CTNAG 4 cut(s) 1155, 1292, 1374, 1529
HpySE526I ACGT 3 cut(s) 379, 654, 1557
Hsp92I GRCGYC 1 cut(s) 1538
Hsp92II CATG 9 cut(s) 114, 411, 602, 705, 1177, 1214, 1222, 1285, 1552
HspAI GCGC 1 cut(s) 412
KroI GCCGGC 1 cut(s) 1762
KroNI GCCGGC 1 cut(s) 1764
Ksp22I TGATCA 1 cut(s) 1411
LmnI GCTCC 2 cut(s) 662, 1781
Lsp1109I GCAGC 3 cut(s) 301, 329, 1771
LweI GCATC 4 cut(s) 718, 812, 887, 1387
MaeI CTAG 3 cut(s) 90, 434, 1464
MaeII ACGT 3 cut(s) 379, 654, 1557
MboII GAAGA 7 cut(s) 339, 434, 466, 524, 567, 1108, 1232
MfeI CAATTG 1 cut(s) 224
MflI RGATCY 4 cut(s) 160, 1225, 1446, 1479
MhlI GDGCHC 3 cut(s) 812, 1276, 1715
MlsI TGGCCA 1 cut(s) 1655
MluNI TGGCCA 1 cut(s) 1655
MlyI GAGTC 1 cut(s) 604
Mox20I TGGCCA 1 cut(s) 1655
Mph1103I ATGCAT 1 cut(s) 805
MroNI GCCGGC 1 cut(s) 1762
MroXI GAANNNNTTC 3 cut(s) 76, 986, 1524
MscI TGGCCA 1 cut(s) 1655
MseI TTAA 4 cut(s) 360, 375, 480, 612
MslI CAYNNNNRTG 1 cut(s) 1383
Msp20I TGGCCA 1 cut(s) 1655
MspA1I CMGCKG 1 cut(s) 8
MspI CCGG 3 cut(s) 37, 875, 1763
MspR9I CCNGG 1 cut(s) 875
MunI CAATTG 1 cut(s) 224
Mva1269I GAATGC 1 cut(s) 805
MvnI CGCG 1 cut(s) 1631
MwoI GCNNNNNNNGC 2 cut(s) 311, 1631
NaeI GCCGGC 1 cut(s) 1764
NciI CCSGG 1 cut(s) 875
NgoMIV GCCGGC 1 cut(s) 1762
NlaIII CATG 9 cut(s) 114, 411, 602, 705, 1177, 1214, 1222, 1285, 1552
NlaIV GGNNCC 5 cut(s) 162, 367, 664, 724, 1227
NmuCI GTSAC 5 cut(s) 11, 650, 778, 1346, 1363
NsiI ATGCAT 1 cut(s) 805
NspI RCATGY 1 cut(s) 1552
PaeR7I CTCGAG 1 cut(s) 1692
PctI GAATGC 1 cut(s) 805
PdiI GCCGGC 1 cut(s) 1764
PdmI GAANNNNTTC 3 cut(s) 76, 986, 1524
PfeI GAWTC 6 cut(s) 119, 295, 685, 854, 952, 1321
PflFI GACNNNGTC 1 cut(s) 1792
PkrI GCNGC 4 cut(s) 316, 319, 1633, 1786
PleI GAGTC 1 cut(s) 603
PpsI GAGTC 1 cut(s) 603
Ppu21I YACGTR 1 cut(s) 655
PpuMI RGGWCCY 1 cut(s) 365
PsiI TTATAA 1 cut(s) 788
Psp124BI GAGCTC 1 cut(s) 1715
Psp5II RGGWCCY 1 cut(s) 365
PspN4I GGNNCC 5 cut(s) 162, 367, 664, 724, 1227
PspPI GGNCC 3 cut(s) 365, 722, 827
PspPPI RGGWCCY 1 cut(s) 365
PstI CTGCAG 2 cut(s) 319, 1821
PsuI RGATCY 4 cut(s) 160, 1225, 1446, 1479
PsyI GACNNNGTC 1 cut(s) 1792
PvuII CAGCTG 1 cut(s) 8
RsaI GTAC 9 cut(s) 109, 657, 739, 758, 1031, 1232, 1288, 1302, 1468
RsaNI GTAC 9 cut(s) 108, 656, 738, 757, 1030, 1231, 1287, 1301, 1467
RseI CAYNNNNRTG 1 cut(s) 1383
SacI GAGCTC 1 cut(s) 1715
SaqAI TTAA 4 cut(s) 360, 375, 480, 612
SatI GCNGC 4 cut(s) 315, 318, 1632, 1785
Sau96I GGNCC 3 cut(s) 365, 722, 827
ScaI AGTACT 1 cut(s) 1468
SchI GAGTC 1 cut(s) 604
ScrFI CCNGG 1 cut(s) 875
SduI GDGCHC 3 cut(s) 812, 1276, 1715
SfaNI GCATC 4 cut(s) 718, 812, 887, 1387
SfcI CTRYAG 2 cut(s) 315, 1817
Sfr274I CTCGAG 1 cut(s) 1692
SinI GGWCC 3 cut(s) 365, 722, 827
SlaI CTCGAG 1 cut(s) 1692
SmiMI CAYNNNNRTG 1 cut(s) 1383
SmlI CTYRAG 1 cut(s) 1692
SmoI CTYRAG 1 cut(s) 1692
SpeI ACTAGT 2 cut(s) 89, 1463
SsiI CCGC 3 cut(s) 720, 1631, 1744
SspI AATATT 2 cut(s) 545, 846
SspMI CTAG 3 cut(s) 90, 434, 1464
SstI GAGCTC 1 cut(s) 1715
StyD4I CCNGG 1 cut(s) 873
StyI CCWWGG 3 cut(s) 1304, 1392, 1635
TaaI ACNGT 7 cut(s) 168, 235, 731, 1023, 1492, 1502, 1771
TaiI ACGT 3 cut(s) 382, 657, 1560
TatI WGTACW 3 cut(s) 756, 1286, 1466
TauI GCSGC 1 cut(s) 1634
TfiI GAWTC 6 cut(s) 119, 295, 685, 854, 952, 1321
Tru1I TTAA 4 cut(s) 360, 375, 480, 612
Tru9I TTAA 4 cut(s) 360, 375, 480, 612
TscAI CASTG 4 cut(s) 162, 171, 261, 1296
TseFI GTSAC 5 cut(s) 11, 650, 778, 1346, 1363
TseI GCWGC 3 cut(s) 314, 317, 1784
Tsp45I GTSAC 5 cut(s) 11, 650, 778, 1346, 1363
TspDTI ATGAA 4 cut(s) 1136, 1334, 1416, 1533
TspGWI ACGGA 2 cut(s) 1218, 1724
TspRI CASTG 4 cut(s) 162, 171, 261, 1296
Tth111I GACNNNGTC 1 cut(s) 1792
VpaK11BI GGWCC 3 cut(s) 365, 722, 827
XapI RAATTY 4 cut(s) 523, 555, 931, 982
XceI RCATGY 1 cut(s) 1552
XhoI CTCGAG 1 cut(s) 1692
XmiI GTMKAC 1 cut(s) 925
XmnI GAANNNNTTC 3 cut(s) 76, 986, 1524
XspI CTAG 3 cut(s) 90, 434, 1464
ZrmI AGTACT 1 cut(s) 1468
Zsp2I ATGCAT 1 cut(s) 805
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.