FvH4_4g00220

Domain of unknown function (DUF4283)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0000073
Physical Location & Seq
Forward (+)
247947 .. 249947
2001 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g00220.t1

Sequence Viewer

Length: 1662 bp
ATGGCCAACCCTCATGAAGATGCTGAGCTTGAGCTACTGGATCTTGCTCAACTGGAAGAGGCCCCTCCTCAATTGGTCGGATACTTGGTGTCTGACAAAGCCCTCAATGTTGCAACTGTCATTCGGATGCTCCGCCAAGCTTGGCAGGAGATAGGTTGGACCCATTTAGAGCCAATACAGGCATACCATACCCTCAATCACTGTAGAGAATGCGGAAGCTGCCCAAATCTTGAGAGCGCAGTCCTTGCATTCTGGGTGCAAGTTCACAACCTGCCCCGTCACCATCTATCCCTTCAAAATGCAACCACTATCGGAAGTGCAATGGGAACGCTAGTGGAAGCGGAAGATCCTAACAGCCCAGAAGGATACTGTGGGTTTCTGAGAATCAGAGTTCAAACTGACTCTCACCGACCACTGCGAACAAATCTTCGGTTTAATAGAGGCAACCCTAGGATCAAAGCACAATTTCGGGCAAGAGTTGCAAGGCGAATTCTTCCACCTAGAATCTTGAATAACGTGGCTCTAGTAGAACCTCTGATGGAGATGGAAGTAGAACATGCCATGCAGGAGTTTAATGCAAATCATATTCAACATGGATTAGGAAAAGAGCATCCTATTTTGGCTCCAAATCTAATGCACGATGAAGTGTTTATCAATCCTCCTAGCTTATATCAACTGATCCCTTCACCAGGTTTCGACATCATTCCTCACTTCCACCAAGGTATTGGAGTCCCAGATAACCATGATCCTAATCTTCTCCAAAGAATGGCAAATTCCAATATGATGAGTCAAGTGAACATGGGCCTCGAAGAGCTAGCCACAAACTATCAGCTTAACATGCAAATTAGAGAGCGATCTGCTGCTTTTGATGAACAAATGGAGGCAATCCTGCAAGCAAATCCTCTTGTGAGCCAAAATCTTACCAACATGGCTCCAGATGCTTTTCCTGAGTACCAGGCTACGCCCATGTTGCATGAAATTGGTTGCCCTCTGTACACTGATGAGTTTGCTACTGGCCCATCTGATCCCCCACCTCGCCTCCTTGAACCCATACTCTTCAATTACCCATACCCAAATATGTACCCAAGCCCAAATCCAACCAATCTTACAGAACAAACCCAGATCCAGAATCCCACTACCACACAAATACTTGATGTTGACTCCACAATCACCTTCATATCATCCACCCTGGAAACCCTCAACCTCAAAAGAGGTAGCTTTGAAGCAGATGAGCCCCCATATACCAAACGCCCATGTTTCATTAGTCAGCACAATCAGGGGAATATCCTTAACCCGGGACTTGGTTTCTCTGATGAAGAAAATAATCAATCTAGCTCTTCCAGAAGAAGTAATCGAGTTTGTGGTAAAAGATCAAACAGGAGAAGAGGAAAAGGAAAGGCAAAAGCCTGGCTGAAGCAAGTGATGAGTCATGATCAAACCCACTATGCTCAAGCAAATGCAGCTCAGTTTCACCAATATTCTCGATCAATGGACACACCTTGTACGAAGTGCAGATTCACAGGGCAGAACAAGTTCAGGTTCGTCGTCATGGAGACACTGCAATTCCAACCCCTCCCAATGTCCATTTCAGTGATCTATCTGAGCAGGATAAGGATGAAGGCTGTGGTGGCTAGCCAGGGGGCAGCCACAAACCAACCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 zf-CCHC_4 zf-RING_2

Protein Analysis

554

Amino Acids

62.49

Weight (kDa)

6.32

Isoelectric Point (pI)

51.87

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000073)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17821 FvH4_2g04610 FvH4_2g09611 FvH4_2g13563 FvH4_3g21493 FvH4_3g32115 FvH4_3g35060 FvH4_4g00220 FvH4_4g06410 FvH4_4g10367 FvH4_4g10367 FvH4_4g10367 FvH4_5g06101 FvH4_5g08842 FvH4_5g27366 FvH4_5g31283 FvH4_6g11611 FvH4_6g23032 FvH4_7g05661 FvH4_7g06172
malus_domestica MD13G1263700.v1.1
prunus_persica Prupe.1G292300_v2.0.a1 Prupe.5G009700_v2.0.a1 Prupe.6G158100_v2.0.a1 Prupe.8G025100_v2.0.a1 Prupe.8G042600_v2.0.a1
pyrus_communis pycom02g02250 pycom02g16030 pycom05g10490 pycom09g06450 pycom09g06460 pycom13g26200 pycom16g17700
rosa_chinensis RchiOBHm_Chr2g0163321 RchiOBHm_Chr4g0401981 RchiOBHm_Chr5g0005991 RchiOBHm_Chr5g0027191 RchiOBHm_Chr6g0249771
rosa_laevigata RLG00000001040 RLG00000001764 RLG00000002239 RLG00000002240 RLG00000003259 RLG00000008993 RLG00000013847 RLG00000014178 RLG00000015576 RLG00000017269 RLG00000017355 RLG00000018127 RLG00000018602 RLG00000018615 RLG00000019904 RLG00000020044 RLG00000021849 RLG00000021850 RLG00000027965 RLG00000029266 RLG00000029820 RLG00000031112 RLG00000031915 RLG00000033568 RLG00000035013 RLG00000035677 RLG00000036568 RLG00000036628
rosa_multiflora Rmu_co8254085.1_g000001 Rmu_co8462383.1_g000001 Rmu_sc0000185.1_g000049 Rmu_sc0000251.1_g000018 Rmu_sc0000367.1_g000094 Rmu_sc0000498.1_g000023 Rmu_sc0000868.1_g000005 Rmu_sc0001521.1_g000047 Rmu_sc0001534.1_g000007 Rmu_sc0002014.1_g000012 Rmu_sc0003214.1_g000009 Rmu_sc0003573.1_g000041 Rmu_sc0003832.1_g000023 Rmu_sc0004677.1_g000015 Rmu_sc0004967.1_g000014 Rmu_sc0005426.1_g000001 Rmu_sc0005621.1_g000004 Rmu_sc0005640.1_g000009 Rmu_sc0005947.1_g000034 Rmu_sc0006889.1_g000011 Rmu_sc0007121.1_g000014 Rmu_sc0009191.1_g000017 Rmu_sc0010556.1_g000011 Rmu_sc0011396.1_g000007 Rmu_sc0019862.1_g000002 Rmu_sc0022931.1_g000003 Rmu_sc0024164.1_g000001 Rmu_ssc0000391.1_g000027
rosa_roxburghii Rroxscaffold_1G00050060 Rroxscaffold_1G00061810 Rroxscaffold_2G00109590 Rroxscaffold_2G00113810 Rroxscaffold_2G00124040 Rroxscaffold_2G00143620 Rroxscaffold_2G00154760 Rroxscaffold_4G00302820 Rroxscaffold_4G00302830 Rroxscaffold_4G00308680 Rroxscaffold_4G00310240 Rroxscaffold_4G00327890 Rroxscaffold_5G00334600 Rroxscaffold_5G00336050 Rroxscaffold_5G00346560 Rroxscaffold_5G00347860 Rroxscaffold_5G00347870 Rroxscaffold_5G00349330 Rroxscaffold_5G00351980 Rroxscaffold_6G00395280 Rroxscaffold_6G00396750 Rroxscaffold_6G00402910 Rroxscaffold_7G00174790 Rroxscaffold_7G00177570 Rroxscaffold_7G00191820 Rroxscaffold_7G00203480 Rroxscaffold_7G00204380
rosa_rugosa Rorug01G0106600 Rorug01G0106600 Rorug01G0148500.1 Rorug02G0224200 Rorug02G0225500 Rorug02G0233000 Rorug02G0630400 Rorug03G0198000 Rorug03G0232600.1 Rorug03G0240500 Rorug04G0032900 Rorug04G0073300 Rorug04G0118500 Rorug04G0149600.1 Rorug04G0205100 Rorug04G0256700 Rorug05G0020200 Rorug05G0050000 Rorug05G0247300 Rorug05G0295100 Rorug05G0337900 Rorug05G0542600 Rorug06G0034800 Rorug06G0035100 Rorug06G0220100 Rorug07G0091900 Rorug07G0271200
rosa_samantha Rh1AG118200 Rh1AG253000 Rh1AG296300 Rh1AG409000 Rh1AG410600 Rh1BG073400 Rh1BG130400 Rh1BG147300 Rh1BG163600 Rh1CG016000 Rh1DG012200 Rh1DG012300 Rh1DG078600 Rh1DG078800 Rh1DG138100 Rh1DG179200 Rh1DG192600 Rh1DG194500 Rh1DG194600 Rh1DG214300 Rh1DG245900 Rh1DG267000 Rh1DG322700 Rh1DG442700 Rh2AG282000 Rh2AG423000 Rh2AG423100 Rh2AG460700 Rh2AG466200 Rh2AG513400 Rh2AG547000 Rh2BG277800 Rh2BG281200 Rh2BG298300 Rh2BG304300 Rh2BG433500 Rh2CG276000 Rh2CG282600 Rh2CG325500 Rh2CG393000 Rh2DG319200 Rh2DG443400 Rh3AG169300 Rh3AG303600 Rh3BG195000 Rh3BG282600 Rh3BG343400 Rh3BG343500 Rh3BG344100 Rh3CG111700 Rh3CG185700 Rh3CG259100 Rh3CG293000 Rh3CG317900 Rh3CG340900 Rh3CG341000 Rh3CG341100 Rh3CG354700 Rh3CG359200 Rh3CG368100 Rh3DG179900 Rh3DG288700 Rh3DG302600 Rh3DG316000 Rh3DG324500 Rh3DG324600 Rh3DG343200 Rh3DG343300 Rh3DG362400 Rh4AG071800 Rh4BG034000 Rh4BG044300 Rh4BG044400 Rh4BG069600 Rh4BG157400 Rh4CG007000 Rh4CG030400 Rh4CG037900 Rh4CG077700 Rh4CG115000 Rh4CG162400 Rh4CG162500 Rh4CG165500 Rh4CG165600 Rh4CG172900 Rh4CG239700 Rh4DG055900 Rh4DG173200 Rh5AG354900 Rh5AG511100 Rh5BG112600 Rh5BG541000 Rh5BG541100 Rh5BG549300 Rh5CG004400 Rh5CG315000 Rh5CG563800 Rh5CG572100 Rh5DG112200 Rh5DG191300 Rh5DG407600 Rh5DG407700 Rh5DG567500 Rh6AG002600 Rh6AG051400 Rh6AG199800 Rh6AG199900 Rh6AG206200 Rh6AG391000 Rh6AG391100 Rh6BG007500 Rh6BG053400 Rh6BG225900 Rh6BG227100 Rh6BG232400 Rh6CG091100 Rh6CG125400 Rh6CG186700 Rh6CG222700 Rh6CG222800 Rh6CG235500 Rh6CG247200 Rh6CG331200 Rh6CG465100 Rh6DG183500 Rh6DG213500 Rh6DG238800 Rh6DG263700 Rh7AG211800 Rh7AG441800 Rh7BG008600 Rh7BG253000 Rh7BG390000 Rh7CG189600 Rh7CG401500 Rh7CG424200 Rh7CG428700 Rh7CG479800 Rh7CG494300 Rh7DG177000 Rh7DG218700 Rh7DG254000 Rh7DG294800 Rh7DG407200 Rh7DG448800 Rh7DG461500
rosa_wichuraiana Rw0G012180 Rw1G005270 Rw1G012310 Rw1G016890 Rw1G021700 Rw2G014380 Rw2G027690 Rw3G016400 Rw3G028230 Rw3G029320 Rw4G002060 Rw4G002100 Rw4G003980 Rw4G014140 Rw4G014770 Rw4G014780 Rw4G015760 Rw4G021230 Rw5G000520 Rw5G035610 Rw6G001680 Rw6G017890 Rw6G027440 Rw6G034130 Rw6G034170 Rw7G012430 Rw7G033870

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 279
AccB7I CCANNNNNTGG 1 cut(s) 766
AciI CCGC 3 cut(s) 133, 213, 341
AclWI GGATC 7 cut(s) 48, 341, 461, 673, 740, 1019, 1117
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 2 cut(s) 489, 772
AcuI CTGAAG 1 cut(s) 1433
AfaI GTAC 4 cut(s) 953, 995, 1082, 1504
AfiI CCNNNNNNNGG 4 cut(s) 689, 766, 1294, 1301
AgsI TTSAA 7 cut(s) 296, 395, 511, 590, 1046, 1060, 1223
AjnI CCWGG 5 cut(s) 688, 954, 1188, 1406, 1635
AjuI GAANNNNNNNTTGG 2 cut(s) 1570, 1602
Alw26I GTCTC 1 cut(s) 1547
AlwI GGATC 7 cut(s) 48, 341, 461, 673, 740, 1019, 1117
Ama87I CYCGRG 1 cut(s) 1294
AoxI GGCC 4 cut(s) 3, 60, 802, 1015
ApeKI GCWGC 4 cut(s) 219, 860, 1460, 1643
ApoI RAATTY 2 cut(s) 489, 772
Asp700I GAANNNNTTC 1 cut(s) 1532
AspA2I CCTAGG 1 cut(s) 449
AspLEI GCGC 1 cut(s) 239
AspS9I GGNCC 4 cut(s) 61, 159, 802, 1016
AsuC2I CCSGG 2 cut(s) 1295, 1296
AsuHPI GGTGA 5 cut(s) 272, 398, 678, 1162, 1463
AsuNHI GCTAGC 2 cut(s) 814, 1631
AvaI CYCGRG 1 cut(s) 1294
AvaII GGWCC 1 cut(s) 159
AvrII CCTAGG 1 cut(s) 449
BalI TGGCCA 1 cut(s) 5
BanII GRGCYC 1 cut(s) 1236
BbvI GCAGC 4 cut(s) 206, 847, 1472, 1655
BccI CCATC 4 cut(s) 291, 532, 538, 1027
BciT130I CCWGG 5 cut(s) 690, 956, 1190, 1408, 1637
BciVI GTATCC 2 cut(s) 74, 359
BclI TGATCA 1 cut(s) 1432
BcnI CCSGG 2 cut(s) 1295, 1296
BcoDI GTCTC 1 cut(s) 1547
BfaI CTAG 8 cut(s) 332, 450, 501, 524, 663, 815, 1332, 1632
BfmI CTRYAG 1 cut(s) 202
BfuAI ACCTGC 1 cut(s) 279
BfuI GTATCC 2 cut(s) 74, 359
BisI GCNGC 4 cut(s) 220, 861, 1461, 1644
BlnI CCTAGG 1 cut(s) 449
BlpI GCTNAGC 1 cut(s) 24
BlsI GCNGC 4 cut(s) 221, 862, 1462, 1645
Bme1390I CCNGG 7 cut(s) 690, 956, 1190, 1295, 1296, 1408, 1637
Bme18I GGWCC 1 cut(s) 159
BmeT110I CYCGRG 1 cut(s) 1294
BmgT120I GGNCC 4 cut(s) 61, 159, 802, 1016
BmiI GGNNCC 4 cut(s) 63, 161, 624, 933
BmrFI CCNGG 7 cut(s) 690, 956, 1190, 1295, 1296, 1408, 1637
BmsI GCATC 4 cut(s) 10, 117, 619, 928
BmtI GCTAGC 2 cut(s) 818, 1635
BpmI CTGGAG 1 cut(s) 918
Bpu1102I GCTNAGC 1 cut(s) 24
BpuEI CTTGAG 3 cut(s) 50, 251, 1434
BpuMI CCSGG 2 cut(s) 1295, 1296
BsaBI GATNNNNATC 1 cut(s) 750
BsaJI CCNNGG 5 cut(s) 449, 718, 1188, 1294, 1636
BsaXI ACNNNNNCTCC 2 cut(s) 1023, 1053
Bsc4I CCNNNNNNNGG 4 cut(s) 689, 766, 1294, 1301
Bse1I ACTGG 3 cut(s) 42, 57, 1018
Bse3DI GCAATG 1 cut(s) 327
Bse8I GATNNNNATC 1 cut(s) 750
BseBI CCWGG 5 cut(s) 690, 956, 1190, 1408, 1637
BseDI CCNNGG 5 cut(s) 449, 718, 1188, 1294, 1636
BseGI GGATG 4 cut(s) 132, 610, 1181, 1620
BseJI GATNNNNATC 1 cut(s) 750
BseLI CCNNNNNNNGG 4 cut(s) 689, 766, 1294, 1301
BseMI GCAATG 1 cut(s) 327
BseMII CTCAG 5 cut(s) 15, 371, 939, 1478, 1592
BseNI ACTGG 3 cut(s) 42, 57, 1018
BseRI GAGGAG 1 cut(s) 57
BseXI GCAGC 4 cut(s) 206, 847, 1472, 1655
BsgI GTGCAG 1 cut(s) 1531
BshFI GGCC 4 cut(s) 5, 62, 804, 1017
BsiHKCI CYCGRG 1 cut(s) 1294
BsiSI CCGG 1 cut(s) 1295
BslFI GGGAC 2 cut(s) 716, 1311
BslI CCNNNNNNNGG 4 cut(s) 689, 766, 1294, 1301
BsmAI GTCTC 1 cut(s) 1547
BsmFI GGGAC 2 cut(s) 716, 1311
BsmI GAATGC 2 cut(s) 215, 248
BsnI GGCC 4 cut(s) 5, 62, 804, 1017
BsoBI CYCGRG 1 cut(s) 1294
Bsp1286I GDGCHC 1 cut(s) 1236
Bsp1407I TGTACA 1 cut(s) 993
Bsp1720I GCTNAGC 1 cut(s) 24
BspACI CCGC 3 cut(s) 133, 213, 341
BspANI GGCC 4 cut(s) 5, 62, 804, 1017
BspCNI CTCAG 5 cut(s) 16, 372, 940, 1477, 1593
BspHI TCATGA 2 cut(s) 13, 1429
BspLI GGNNCC 4 cut(s) 63, 161, 624, 933
BspMI ACCTGC 1 cut(s) 279
BspOI GCTAGC 2 cut(s) 818, 1635
BspPI GGATC 7 cut(s) 48, 341, 461, 673, 740, 1019, 1117
BspQI GCTCTTC 2 cut(s) 804, 1342
BsrDI GCAATG 1 cut(s) 327
BsrGI TGTACA 1 cut(s) 993
BsrI ACTGG 3 cut(s) 42, 57, 1018
BssECI CCNNGG 5 cut(s) 449, 718, 1188, 1294, 1636
BssT1I CCWWGG 2 cut(s) 449, 718
Bst2UI CCWGG 5 cut(s) 690, 956, 1190, 1408, 1637
Bst4CI ACNGT 3 cut(s) 118, 203, 371
Bst6I CTCTTC 5 cut(s) 51, 804, 1061, 1342, 1378
BstAPI GCANNNNNTGC 2 cut(s) 245, 479
BstAUI TGTACA 1 cut(s) 993
BstC8I GCNNGC 3 cut(s) 816, 894, 1633
BstDEI CTNAG 5 cut(s) 24, 380, 948, 1464, 1601
BstENI CCTNNNNNAGG 1 cut(s) 687
BstF5I GGATG 4 cut(s) 132, 610, 1181, 1620
BstHHI GCGC 1 cut(s) 239
BstMAI GTCTC 1 cut(s) 1547
BstMWI GCNNNNNNNGC 8 cut(s) 219, 245, 479, 838, 938, 970, 1460, 1628
BstNI CCWGG 5 cut(s) 690, 956, 1190, 1408, 1637
BstNSI RCATGY 2 cut(s) 560, 841
BstSCI CCNGG 7 cut(s) 688, 954, 1188, 1293, 1294, 1406, 1635
BstSFI CTRYAG 1 cut(s) 202
BstV1I GCAGC 4 cut(s) 206, 847, 1472, 1655
BstX2I RGATCY 3 cut(s) 40, 346, 1122
BstXI CCANNNNNNTGG 1 cut(s) 725
BstYI RGATCY 3 cut(s) 40, 346, 1122
BsuI GTATCC 2 cut(s) 74, 359
BsuRI GGCC 4 cut(s) 5, 62, 804, 1017
BtsCI GGATG 4 cut(s) 132, 610, 1181, 1620
BtsI GCAGTG 2 cut(s) 413, 1556
BtsIMutI CAGTG 5 cut(s) 199, 413, 996, 1556, 1596
BveI ACCTGC 1 cut(s) 279
Cac8I GCNNGC 3 cut(s) 816, 894, 1633
CciI TCATGA 2 cut(s) 13, 1429
CfoI GCGC 1 cut(s) 239
Cfr13I GGNCC 4 cut(s) 61, 159, 802, 1016
Cfr9I CCCGGG 1 cut(s) 1294
CsiI ACCWGGT 1 cut(s) 688
Csp6I GTAC 4 cut(s) 952, 994, 1081, 1503
CviQI GTAC 4 cut(s) 952, 994, 1081, 1503
DdeI CTNAG 5 cut(s) 24, 380, 948, 1464, 1601
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 5 cut(s) 51, 804, 1061, 1342, 1378
EarI CTCTTC 5 cut(s) 51, 804, 1061, 1342, 1378
EciI GGCGGA 1 cut(s) 122
Eco130I CCWWGG 2 cut(s) 449, 718
Eco24I GRGCYC 1 cut(s) 1236
Eco47I GGWCC 1 cut(s) 159
Eco57I CTGAAG 1 cut(s) 1433
Eco88I CYCGRG 1 cut(s) 1294
EcoNI CCTNNNNNAGG 1 cut(s) 687
EcoO109I RGGNCCY 1 cut(s) 61
EcoRI GAATTC 1 cut(s) 489
EcoRII CCWGG 5 cut(s) 688, 954, 1188, 1406, 1635
EcoT14I CCWWGG 2 cut(s) 449, 718
EcoT38I GRGCYC 1 cut(s) 1236
ErhI CCWWGG 2 cut(s) 449, 718
FaqI GGGAC 2 cut(s) 716, 1311
FbaI TGATCA 1 cut(s) 1432
Fnu4HI GCNGC 4 cut(s) 220, 861, 1461, 1644
FokI GGATG 4 cut(s) 139, 597, 1168, 1627
FriOI GRGCYC 1 cut(s) 1236
Fsp4HI GCNGC 4 cut(s) 220, 861, 1461, 1644
FspBI CTAG 8 cut(s) 332, 450, 501, 524, 663, 815, 1332, 1632
GlaI GCGC 1 cut(s) 238
GluI GCNGC 4 cut(s) 220, 861, 1461, 1644
GsuI CTGGAG 1 cut(s) 918
HaeIII GGCC 4 cut(s) 5, 62, 804, 1017
HapII CCGG 1 cut(s) 1295
HhaI GCGC 1 cut(s) 239
Hin6I GCGC 1 cut(s) 237
HinP1I GCGC 1 cut(s) 237
HincII GTYRAC 1 cut(s) 1159
HindII GTYRAC 1 cut(s) 1159
HindIII AAGCTT 1 cut(s) 138
HinfI GANTC 9 cut(s) 384, 401, 504, 729, 787, 1129, 1160, 1426, 1515
HpaII CCGG 1 cut(s) 1295
HphI GGTGA 5 cut(s) 272, 398, 678, 1162, 1463
Hpy166II GTNNAC 4 cut(s) 265, 796, 996, 1159
Hpy188III TCNNGA 9 cut(s) 14, 230, 508, 935, 947, 1126, 1341, 1430, 1482
Hpy8I GTNNAC 4 cut(s) 265, 796, 996, 1159
Hpy99I CGWCG 1 cut(s) 1547
HpyAV CCTTC 5 cut(s) 302, 356, 693, 1183, 1612
HpyCH4III ACNGT 3 cut(s) 118, 203, 371
HpyCH4IV ACGT 1 cut(s) 516
HpyF10VI GCNNNNNNNGC 8 cut(s) 219, 245, 479, 838, 938, 970, 1460, 1628
HpyF3I CTNAG 5 cut(s) 24, 380, 948, 1464, 1601
HpySE526I ACGT 1 cut(s) 516
HspAI GCGC 1 cut(s) 237
Ksp22I TGATCA 1 cut(s) 1432
LguI GCTCTTC 2 cut(s) 804, 1342
LmnI GCTCC 3 cut(s) 135, 628, 937
Lsp1109I GCAGC 4 cut(s) 206, 847, 1472, 1655
LweI GCATC 4 cut(s) 10, 117, 619, 928
MabI ACCWGGT 1 cut(s) 688
MaeI CTAG 8 cut(s) 332, 450, 501, 524, 663, 815, 1332, 1632
MaeII ACGT 1 cut(s) 516
MaeIII GTNAC 1 cut(s) 278
MfeI CAATTG 1 cut(s) 71
MflI RGATCY 3 cut(s) 40, 346, 1122
MhlI GDGCHC 1 cut(s) 1236
MlsI TGGCCA 1 cut(s) 5
MluCI AATT 8 cut(s) 71, 464, 489, 772, 843, 978, 1060, 1562
MluNI TGGCCA 1 cut(s) 5
MlyI GAGTC 5 cut(s) 395, 738, 796, 1154, 1435
MmeI TCCRAC 4 cut(s) 58, 137, 1121, 1591
Mox20I TGGCCA 1 cut(s) 5
MroXI GAANNNNTTC 1 cut(s) 1532
MscI TGGCCA 1 cut(s) 5
MseI TTAA 4 cut(s) 435, 573, 834, 1290
MslI CAYNNNNRTG 3 cut(s) 18, 125, 1589
Msp20I TGGCCA 1 cut(s) 5
MspI CCGG 1 cut(s) 1295
MspR9I CCNGG 7 cut(s) 690, 956, 1190, 1295, 1296, 1408, 1637
MunI CAATTG 1 cut(s) 71
Mva1269I GAATGC 2 cut(s) 215, 248
MvaI CCWGG 5 cut(s) 690, 956, 1190, 1408, 1637
MwoI GCNNNNNNNGC 8 cut(s) 219, 245, 479, 838, 938, 970, 1460, 1628
NciI CCSGG 2 cut(s) 1295, 1296
NheI GCTAGC 2 cut(s) 814, 1631
NlaIV GGNNCC 4 cut(s) 63, 161, 624, 933
NmuCI GTSAC 1 cut(s) 278
NspI RCATGY 2 cut(s) 560, 841
PagI TCATGA 2 cut(s) 13, 1429
PciSI GCTCTTC 2 cut(s) 804, 1342
PctI GAATGC 2 cut(s) 215, 248
PdmI GAANNNNTTC 1 cut(s) 1532
PfeI GAWTC 4 cut(s) 384, 504, 1129, 1515
PflMI CCANNNNNTGG 1 cut(s) 766
PkrI GCNGC 4 cut(s) 221, 862, 1462, 1645
PleI GAGTC 5 cut(s) 395, 737, 795, 1154, 1434
PpsI GAGTC 5 cut(s) 395, 737, 795, 1154, 1434
Psp6I CCWGG 5 cut(s) 688, 954, 1188, 1406, 1635
PspGI CCWGG 5 cut(s) 688, 954, 1188, 1406, 1635
PspN4I GGNNCC 4 cut(s) 63, 161, 624, 933
PspPI GGNCC 4 cut(s) 61, 159, 802, 1016
PsuI RGATCY 3 cut(s) 40, 346, 1122
RsaI GTAC 4 cut(s) 953, 995, 1082, 1504
RsaNI GTAC 4 cut(s) 952, 994, 1081, 1503
RseI CAYNNNNRTG 3 cut(s) 18, 125, 1589
SapI GCTCTTC 2 cut(s) 804, 1342
SaqAI TTAA 4 cut(s) 435, 573, 834, 1290
SatI GCNGC 4 cut(s) 220, 861, 1461, 1644
Sau96I GGNCC 4 cut(s) 61, 159, 802, 1016
SchI GAGTC 5 cut(s) 395, 738, 796, 1154, 1435
ScrFI CCNGG 7 cut(s) 690, 956, 1190, 1295, 1296, 1408, 1637
SduI GDGCHC 1 cut(s) 1236
SexAI ACCWGGT 1 cut(s) 688
SfaNI GCATC 4 cut(s) 10, 117, 619, 928
SfcI CTRYAG 1 cut(s) 202
SinI GGWCC 1 cut(s) 159
SmaI CCCGGG 1 cut(s) 1296
SmiMI CAYNNNNRTG 3 cut(s) 18, 125, 1589
SmlI CTYRAG 3 cut(s) 29, 230, 1449
SmoI CTYRAG 3 cut(s) 29, 230, 1449
Sse9I AATT 8 cut(s) 71, 464, 489, 772, 843, 978, 1060, 1562
SsiI CCGC 3 cut(s) 133, 213, 341
SspI AATATT 1 cut(s) 1478
SspMI CTAG 8 cut(s) 332, 450, 501, 524, 663, 815, 1332, 1632
StyD4I CCNGG 7 cut(s) 688, 954, 1188, 1293, 1294, 1406, 1635
StyI CCWWGG 2 cut(s) 449, 718
TaaI ACNGT 3 cut(s) 118, 203, 371
TaiI ACGT 1 cut(s) 519
TaqI TCGA 4 cut(s) 696, 807, 1354, 1483
TasI AATT 8 cut(s) 71, 464, 489, 772, 843, 978, 1060, 1562
TatI WGTACW 1 cut(s) 993
TfiI GAWTC 4 cut(s) 384, 504, 1129, 1515
Tru1I TTAA 4 cut(s) 435, 573, 834, 1290
Tru9I TTAA 4 cut(s) 435, 573, 834, 1290
TscAI CASTG 5 cut(s) 206, 420, 1003, 1563, 1596
TseFI GTSAC 1 cut(s) 278
TseI GCWGC 4 cut(s) 219, 860, 1460, 1643
Tsp45I GTSAC 1 cut(s) 278
TspDTI ATGAA 8 cut(s) 30, 657, 885, 990, 1165, 1249, 1329, 1631
TspMI CCCGGG 1 cut(s) 1294
TspRI CASTG 5 cut(s) 206, 420, 1003, 1563, 1596
Van91I CCANNNNNTGG 1 cut(s) 766
VpaK11BI GGWCC 1 cut(s) 159
XagI CCTNNNNNAGG 1 cut(s) 687
XapI RAATTY 2 cut(s) 489, 772
XceI RCATGY 2 cut(s) 560, 841
XcmI CCANNNNNNNNNTGG 1 cut(s) 722
XmaI CCCGGG 1 cut(s) 1294
XmaJI CCTAGG 1 cut(s) 449
XmnI GAANNNNTTC 1 cut(s) 1532
XspI CTAG 8 cut(s) 332, 450, 501, 524, 663, 815, 1332, 1632
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.