Rorug01G0106600
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
Physical Location & Seq
Reverse (-)
19134246 .. 19139680
5435 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0106600.1

Sequence Viewer

Length: 1629 bp
ATGGAGGACAAGTGTAGCCCCAAGGAGATCTGCGATAAGTACCATGCGATTCATAGGCAGGTGTATGAGTGGTTCAATATAAGTTTTGACAAATTCGGGCGAACTTCGACGCCGGAGCAGACGGAGGTGTGCCAAGCCATTTTCAATAGGCTGCTGGAGAATAATTGGCTCTCTGACAACACAATGCAGCAGCTCTACTGTGATACTTGCACACGGTTTTTAGCCGACAGGCTCGTGGAGGGGACGTGCCCAACGCAAGGTTGTGATTATACTTCTGCAAGAGGAGATCAGTGTGAGAACTGTGGAAAGCTTTTAAACCCTACCGAATTAAAGGATCCAAAGTGCAAGGTCTGTAAGTCGACTCCACGGATTCGTGATACAAACCATTTGTTTCTGGAATTGCCTTTGCTGAAGGATAGGTTGGAAGAGTATATTAATAAAATGTCAGTGGAGGGGTCTTGGAGCCAGAATGCCATTCAAGCAACAAATGCGTGGCTCAGAGAGGGGCTTAAACAACGGTGTATCACCAGGGATCTGAAGTGGGGGGTTCCAGTTCCACATGATAACTTCAGGGACAAGGTTTTCTATGTGTGGTTTGATGCGCCTATTGGATATGTTTCAATTACTAAATGCTACACTTCAGATTGGGAGAAATGGTGGAAGAATCCAGAGGATGTGGAGTTGTATCAGTTTATGGGCAAAGATAATGTGCCATTCCACACGGTGATGTTTCCTTCCACGCTTCTTGGAACTGGTGAAAATTGGACTTTAATGAAGACAATTAGTGTTACTGAATACTTGAACTATGAAGCAGGAAAGTTTTCCAAGAGTAAAGGGATTGGAGTATTTGGAAACGATGCCAAAGATACAAACATTCCTGTTGAAGTATGGCGATATTACTTGCTAACCAATAGGCCCGAGGTGTCGGATACATTATTTACATGGGCGGATTTGCAAGCGAAGCTCAACAGTGAATTGCTGAATAATTTGGGCAACTTCATTAACCGAGTTTTGAGTTTTGTTGCCAAACCTTCAGGTCAAGGATATGACTCCATTATTCCAGATGCTCAAGATGCCATCTCTGATCCTTTGACAGAGAAAATAGCTGAGAAAGTGGGTAAATATGTGGAGCAATATGTAGAGGCCATGGAGAAGGTAAAACTAAAGCAAGGACTCAAACTAGCAATGAGCATTTCTAGTGAAGGGAATGCATATCTGCAAGAAAGTCGGTTCTGGAAGCTTTACAAGGAAGACCAACCTCGCTGCTCCATTGTTATGAGAACTGCAGTGGGGCTAGTGCATCTTCTTGCTTGCTTATTAGAACCCTTCATGCCATCGTTTTCTGTTAAGGTATTTAAGCAGCTTAATCTGCCTCCTGAGACGCACATATCACTTTGTGATGATAAAGGTGATACTGATAGGGCAAGACGGCCATGGGAGATTGTACCTAGAGGTCACAAGATTGGGAAACCAGAGCCGTTGTTCAAGGAATTGAATAATGATGAAGTAGATTCTCTAAGGAAGAAGTTTGCTGGAAGTCAGGCCGATAGAAAGGAAAGGGAAGAAGCTGAAGCAGTGAAGTTGGCTGAGCAGCTCAAGAAATCAAAAGTTTCAGAATCGGAAGGTTGA

Protein Analysis

542

Amino Acids

62.35

Weight (kDa)

6.05

Isoelectric Point (pI)

29.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
tRNA-synt_1g PF09334 3 - 338 1.9e-125 tRNA synthetases class I (M)
Anticodon_3 PF19303 365 - 514 1.9e-19 Anticodon binding domain of methionyl tRNA ligase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000073)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17821 FvH4_2g04610 FvH4_2g09611 FvH4_2g13563 FvH4_3g21493 FvH4_3g32115 FvH4_3g35060 FvH4_4g00220 FvH4_4g06410 FvH4_4g10367 FvH4_4g10367 FvH4_4g10367 FvH4_5g06101 FvH4_5g08842 FvH4_5g27366 FvH4_5g31283 FvH4_6g11611 FvH4_6g23032 FvH4_7g05661 FvH4_7g06172
malus_domestica MD13G1263700.v1.1
prunus_persica Prupe.1G292300_v2.0.a1 Prupe.5G009700_v2.0.a1 Prupe.6G158100_v2.0.a1 Prupe.8G025100_v2.0.a1 Prupe.8G042600_v2.0.a1
pyrus_communis pycom02g02250 pycom02g16030 pycom05g10490 pycom09g06450 pycom09g06460 pycom13g26200 pycom16g17700
rosa_chinensis RchiOBHm_Chr2g0163321 RchiOBHm_Chr4g0401981 RchiOBHm_Chr5g0005991 RchiOBHm_Chr5g0027191 RchiOBHm_Chr6g0249771
rosa_laevigata RLG00000001040 RLG00000001764 RLG00000002239 RLG00000002240 RLG00000003259 RLG00000008993 RLG00000013847 RLG00000014178 RLG00000015576 RLG00000017269 RLG00000017355 RLG00000018127 RLG00000018602 RLG00000018615 RLG00000019904 RLG00000020044 RLG00000021849 RLG00000021850 RLG00000027965 RLG00000029266 RLG00000029820 RLG00000031112 RLG00000031915 RLG00000033568 RLG00000035013 RLG00000035677 RLG00000036568 RLG00000036628
rosa_multiflora Rmu_co8254085.1_g000001 Rmu_co8462383.1_g000001 Rmu_sc0000185.1_g000049 Rmu_sc0000251.1_g000018 Rmu_sc0000367.1_g000094 Rmu_sc0000498.1_g000023 Rmu_sc0000868.1_g000005 Rmu_sc0001521.1_g000047 Rmu_sc0001534.1_g000007 Rmu_sc0002014.1_g000012 Rmu_sc0003214.1_g000009 Rmu_sc0003573.1_g000041 Rmu_sc0003832.1_g000023 Rmu_sc0004677.1_g000015 Rmu_sc0004967.1_g000014 Rmu_sc0005426.1_g000001 Rmu_sc0005621.1_g000004 Rmu_sc0005640.1_g000009 Rmu_sc0005947.1_g000034 Rmu_sc0006889.1_g000011 Rmu_sc0007121.1_g000014 Rmu_sc0009191.1_g000017 Rmu_sc0010556.1_g000011 Rmu_sc0011396.1_g000007 Rmu_sc0019862.1_g000002 Rmu_sc0022931.1_g000003 Rmu_sc0024164.1_g000001 Rmu_ssc0000391.1_g000027
rosa_roxburghii Rroxscaffold_1G00050060 Rroxscaffold_1G00061810 Rroxscaffold_2G00109590 Rroxscaffold_2G00113810 Rroxscaffold_2G00124040 Rroxscaffold_2G00143620 Rroxscaffold_2G00154760 Rroxscaffold_4G00302820 Rroxscaffold_4G00302830 Rroxscaffold_4G00308680 Rroxscaffold_4G00310240 Rroxscaffold_4G00327890 Rroxscaffold_5G00334600 Rroxscaffold_5G00336050 Rroxscaffold_5G00346560 Rroxscaffold_5G00347860 Rroxscaffold_5G00347870 Rroxscaffold_5G00349330 Rroxscaffold_5G00351980 Rroxscaffold_6G00395280 Rroxscaffold_6G00396750 Rroxscaffold_6G00402910 Rroxscaffold_7G00174790 Rroxscaffold_7G00177570 Rroxscaffold_7G00191820 Rroxscaffold_7G00203480 Rroxscaffold_7G00204380
rosa_rugosa Rorug01G0106600 Rorug01G0106600 Rorug01G0148500.1 Rorug02G0224200 Rorug02G0225500 Rorug02G0233000 Rorug02G0630400 Rorug03G0198000 Rorug03G0232600.1 Rorug03G0240500 Rorug04G0032900 Rorug04G0073300 Rorug04G0118500 Rorug04G0149600.1 Rorug04G0205100 Rorug04G0256700 Rorug05G0020200 Rorug05G0050000 Rorug05G0247300 Rorug05G0295100 Rorug05G0337900 Rorug05G0542600 Rorug06G0034800 Rorug06G0035100 Rorug06G0220100 Rorug07G0091900 Rorug07G0271200
rosa_samantha Rh1AG118200 Rh1AG253000 Rh1AG296300 Rh1AG409000 Rh1AG410600 Rh1BG073400 Rh1BG130400 Rh1BG147300 Rh1BG163600 Rh1CG016000 Rh1DG012200 Rh1DG012300 Rh1DG078600 Rh1DG078800 Rh1DG138100 Rh1DG179200 Rh1DG192600 Rh1DG194500 Rh1DG194600 Rh1DG214300 Rh1DG245900 Rh1DG267000 Rh1DG322700 Rh1DG442700 Rh2AG282000 Rh2AG423000 Rh2AG423100 Rh2AG460700 Rh2AG466200 Rh2AG513400 Rh2AG547000 Rh2BG277800 Rh2BG281200 Rh2BG298300 Rh2BG304300 Rh2BG433500 Rh2CG276000 Rh2CG282600 Rh2CG325500 Rh2CG393000 Rh2DG319200 Rh2DG443400 Rh3AG169300 Rh3AG303600 Rh3BG195000 Rh3BG282600 Rh3BG343400 Rh3BG343500 Rh3BG344100 Rh3CG111700 Rh3CG185700 Rh3CG259100 Rh3CG293000 Rh3CG317900 Rh3CG340900 Rh3CG341000 Rh3CG341100 Rh3CG354700 Rh3CG359200 Rh3CG368100 Rh3DG179900 Rh3DG288700 Rh3DG302600 Rh3DG316000 Rh3DG324500 Rh3DG324600 Rh3DG343200 Rh3DG343300 Rh3DG362400 Rh4AG071800 Rh4BG034000 Rh4BG044300 Rh4BG044400 Rh4BG069600 Rh4BG157400 Rh4CG007000 Rh4CG030400 Rh4CG037900 Rh4CG077700 Rh4CG115000 Rh4CG162400 Rh4CG162500 Rh4CG165500 Rh4CG165600 Rh4CG172900 Rh4CG239700 Rh4DG055900 Rh4DG173200 Rh5AG354900 Rh5AG511100 Rh5BG112600 Rh5BG541000 Rh5BG541100 Rh5BG549300 Rh5CG004400 Rh5CG315000 Rh5CG563800 Rh5CG572100 Rh5DG112200 Rh5DG191300 Rh5DG407600 Rh5DG407700 Rh5DG567500 Rh6AG002600 Rh6AG051400 Rh6AG199800 Rh6AG199900 Rh6AG206200 Rh6AG391000 Rh6AG391100 Rh6BG007500 Rh6BG053400 Rh6BG225900 Rh6BG227100 Rh6BG232400 Rh6CG091100 Rh6CG125400 Rh6CG186700 Rh6CG222700 Rh6CG222800 Rh6CG235500 Rh6CG247200 Rh6CG331200 Rh6CG465100 Rh6DG183500 Rh6DG213500 Rh6DG238800 Rh6DG263700 Rh7AG211800 Rh7AG441800 Rh7BG008600 Rh7BG253000 Rh7BG390000 Rh7CG189600 Rh7CG401500 Rh7CG424200 Rh7CG428700 Rh7CG479800 Rh7CG494300 Rh7DG177000 Rh7DG218700 Rh7DG254000 Rh7DG294800 Rh7DG407200 Rh7DG448800 Rh7DG461500
rosa_wichuraiana Rw0G012180 Rw1G005270 Rw1G012310 Rw1G016890 Rw1G021700 Rw2G014380 Rw2G027690 Rw3G016400 Rw3G028230 Rw3G029320 Rw4G002060 Rw4G002100 Rw4G003980 Rw4G014140 Rw4G014770 Rw4G014780 Rw4G015760 Rw4G021230 Rw5G000520 Rw5G035610 Rw6G001680 Rw6G017890 Rw6G027440 Rw6G034130 Rw6G034170 Rw7G012430 Rw7G033870

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 49
Acc36I ACCTGC 1 cut(s) 49
AccI GTMKAC 1 cut(s) 359
AciI CCGC 1 cut(s) 947
AclWI GGATC 4 cut(s) 329, 342, 540, 1079
AcoI YGGCCR 1 cut(s) 1430
AcsI RAATTY 1 cut(s) 92
AcuI CTGAAG 6 cut(s) 431, 553, 557, 624, 1017, 1590
AcyI GRCGYC 1 cut(s) 110
AdeI CACNNNGTG 2 cut(s) 724, 1397
AfaI GTAC 2 cut(s) 41, 1446
AfiI CCNNNNNNNGG 1 cut(s) 257
AgsI TTSAA 8 cut(s) 76, 145, 479, 621, 802, 884, 1486, 1495
AjiI CACGTC 1 cut(s) 246
AjnI CCWGG 1 cut(s) 527
AjuI GAANNNNNNNTTGG 2 cut(s) 404, 436
AluBI AGCT 8 cut(s) 193, 310, 964, 1106, 1240, 1363, 1568, 1594
AluI AGCT 8 cut(s) 193, 310, 964, 1106, 1240, 1363, 1568, 1594
Alw26I GTCTC 1 cut(s) 1373
AlwI GGATC 4 cut(s) 329, 342, 540, 1079
Ama87I CYCGRG 1 cut(s) 917
AoxI GGCC 4 cut(s) 914, 1143, 1430, 1542
ApeKI GCWGC 6 cut(s) 151, 187, 190, 1263, 1360, 1591
ApoI RAATTY 1 cut(s) 92
AseI ATTAAT 1 cut(s) 435
Asp700I GAANNNNTTC 1 cut(s) 820
AspLEI GCGC 1 cut(s) 604
AspS9I GGNCC 1 cut(s) 915
AsuHPI GGTGA 4 cut(s) 517, 736, 767, 1421
AvaI CYCGRG 1 cut(s) 917
BaeGI GKGCMC 1 cut(s) 251
BamHI GGATCC 1 cut(s) 334
BauI CACGAG 1 cut(s) 233
BbsI GAAGAC 2 cut(s) 782, 1257
BbvI GCAGC 6 cut(s) 138, 199, 202, 1250, 1372, 1603
BccI CCATC 2 cut(s) 1085, 1342
BceAI ACGGC 2 cut(s) 1445, 1462
BcgI CGANNNNNNTGC 2 cut(s) 1208, 1242
BciT130I CCWGG 1 cut(s) 529
BciVI GTATCC 1 cut(s) 922
BcoDI GTCTC 1 cut(s) 1373
BfaI CTAG 4 cut(s) 1181, 1197, 1295, 1449
BfmI CTRYAG 1 cut(s) 1284
BfuAI ACCTGC 1 cut(s) 49
BfuI GTATCC 1 cut(s) 922
BglII AGATCT 1 cut(s) 27
BisI GCNGC 6 cut(s) 152, 188, 191, 1264, 1361, 1592
BlpI GCTNAGC 1 cut(s) 1587
BlsI GCNGC 6 cut(s) 153, 189, 192, 1265, 1362, 1593
Bme1390I CCNGG 1 cut(s) 529
BmeT110I CYCGRG 1 cut(s) 917
BmgBI CACGTC 1 cut(s) 246
BmgT120I GGNCC 1 cut(s) 915
BmiI GGNNCC 3 cut(s) 336, 464, 549
BmrFI CCNGG 1 cut(s) 529
BmsI GCATC 5 cut(s) 589, 847, 1054, 1063, 1309
BpiI GAAGAC 2 cut(s) 782, 1257
BpmI CTGGAG 1 cut(s) 176
Bpu1102I GCTNAGC 1 cut(s) 1587
BpuEI CTTGAG 2 cut(s) 1053, 1580
BsaHI GRCGYC 1 cut(s) 110
BsaJI CCNNGG 6 cut(s) 21, 365, 528, 918, 1146, 1433
BsaXI ACNNNNNCTCC 5 cut(s) 26, 230, 260, 641, 671
Bsc4I CCNNNNNNNGG 1 cut(s) 257
Bse1I ACTGG 2 cut(s) 551, 757
Bse3DI GCAATG 1 cut(s) 1191
BseBI CCWGG 1 cut(s) 529
BseDI CCNNGG 6 cut(s) 21, 365, 528, 918, 1146, 1433
BseGI GGATG 1 cut(s) 679
BseLI CCNNNNNNNGG 1 cut(s) 257
BseMI GCAATG 1 cut(s) 1191
BseMII CTCAG 4 cut(s) 511, 1098, 1368, 1578
BseNI ACTGG 2 cut(s) 551, 757
BseRI GAGGAG 1 cut(s) 297
BseSI GKGCMC 1 cut(s) 251
BseXI GCAGC 6 cut(s) 138, 199, 202, 1250, 1372, 1603
BshFI GGCC 4 cut(s) 916, 1145, 1432, 1544
BsiHKCI CYCGRG 1 cut(s) 917
BsiSI CCGG 1 cut(s) 113
BslFI GGGAC 2 cut(s) 256, 587
BslI CCNNNNNNNGG 1 cut(s) 257
BsmAI GTCTC 1 cut(s) 1373
BsmBI CGTCTC 1 cut(s) 1373
BsmFI GGGAC 2 cut(s) 256, 587
BsmI GAATGC 2 cut(s) 475, 1213
BsnI GGCC 4 cut(s) 916, 1145, 1432, 1544
BsoBI CYCGRG 1 cut(s) 917
Bsp1286I GDGCHC 1 cut(s) 251
Bsp143I GATC 5 cut(s) 27, 286, 334, 532, 1084
Bsp1720I GCTNAGC 1 cut(s) 1587
Bsp19I CCATGG 2 cut(s) 1146, 1433
BspACI CCGC 1 cut(s) 947
BspANI GGCC 4 cut(s) 916, 1145, 1432, 1544
BspCNI CTCAG 4 cut(s) 510, 1099, 1369, 1579
BspLI GGNNCC 3 cut(s) 336, 464, 549
BspMAI CTGCAG 1 cut(s) 1288
BspMI ACCTGC 1 cut(s) 49
BspPI GGATC 4 cut(s) 329, 342, 540, 1079
BsrDI GCAATG 1 cut(s) 1191
BsrI ACTGG 2 cut(s) 551, 757
BssECI CCNNGG 6 cut(s) 21, 365, 528, 918, 1146, 1433
BssMI GATC 5 cut(s) 27, 286, 334, 532, 1084
BssNI GRCGYC 1 cut(s) 110
BssSI CACGAG 1 cut(s) 233
BssT1I CCWWGG 3 cut(s) 21, 1146, 1433
Bst2BI CACGAG 1 cut(s) 233
Bst2UI CCWGG 1 cut(s) 529
Bst4CI ACNGT 6 cut(s) 200, 216, 302, 519, 724, 971
Bst6I CTCTTC 1 cut(s) 420
BstACI GRCGYC 1 cut(s) 110
BstAPI GCANNNNNTGC 1 cut(s) 488
BstC8I GCNNGC 2 cut(s) 957, 1312
BstDEI CTNAG 5 cut(s) 497, 1107, 1377, 1517, 1587
BstDSI CCRYGG 3 cut(s) 365, 1146, 1433
BstF5I GGATG 1 cut(s) 679
BstHHI GCGC 1 cut(s) 604
BstKTI GATC 5 cut(s) 30, 289, 337, 535, 1087
BstMAI GTCTC 1 cut(s) 1373
BstMBI GATC 5 cut(s) 27, 286, 334, 532, 1084
BstMWI GCNNNNNNNGC 5 cut(s) 479, 488, 961, 1073, 1369
BstNI CCWGG 1 cut(s) 529
BstSCI CCNGG 1 cut(s) 527
BstSFI CTRYAG 1 cut(s) 1284
BstSLI GKGCMC 1 cut(s) 251
BstV1I GCAGC 6 cut(s) 138, 199, 202, 1250, 1372, 1603
BstV2I GAAGAC 2 cut(s) 782, 1257
BstX2I RGATCY 3 cut(s) 27, 334, 532
BstYI RGATCY 3 cut(s) 27, 334, 532
BsuI GTATCC 1 cut(s) 922
BsuRI GGCC 4 cut(s) 916, 1145, 1432, 1544
BtgI CCRYGG 3 cut(s) 365, 1146, 1433
BtrI CACGTC 1 cut(s) 246
BtsCI GGATG 1 cut(s) 679
BtsI GCAGTG 2 cut(s) 1293, 1581
BtsIMutI CAGTG 5 cut(s) 296, 453, 976, 1293, 1581
BveI ACCTGC 1 cut(s) 49
Cac8I GCNNGC 2 cut(s) 957, 1312
CfoI GCGC 1 cut(s) 604
Cfr13I GGNCC 1 cut(s) 915
CseI GACGC 2 cut(s) 118, 1390
Csp6I GTAC 2 cut(s) 40, 1445
CspCI CAANNNNNGTGG 2 cut(s) 727, 762
CviAII CATG 6 cut(s) 44, 560, 942, 1147, 1330, 1434
CviQI GTAC 2 cut(s) 40, 1445
DdeI CTNAG 5 cut(s) 497, 1107, 1377, 1517, 1587
DpnI GATC 5 cut(s) 29, 288, 336, 534, 1086
DpnII GATC 5 cut(s) 27, 286, 334, 532, 1084
DraI TTTAAA 1 cut(s) 315
DraIII CACNNNGTG 2 cut(s) 724, 1397
EaeI YGGCCR 1 cut(s) 1430
Eam1104I CTCTTC 1 cut(s) 420
EarI CTCTTC 1 cut(s) 420
EciI GGCGGA 1 cut(s) 962
Eco130I CCWWGG 3 cut(s) 21, 1146, 1433
Eco57I CTGAAG 6 cut(s) 431, 553, 557, 624, 1017, 1590
Eco88I CYCGRG 1 cut(s) 917
EcoRII CCWGG 1 cut(s) 527
EcoT14I CCWWGG 3 cut(s) 21, 1146, 1433
EcoT22I ATGCAT 1 cut(s) 1213
ErhI CCWWGG 3 cut(s) 21, 1146, 1433
Esp3I CGTCTC 1 cut(s) 1373
FaeI CATG 6 cut(s) 47, 563, 945, 1150, 1333, 1437
FaqI GGGAC 2 cut(s) 256, 587
FatI CATG 6 cut(s) 43, 559, 941, 1146, 1329, 1433
FblI GTMKAC 1 cut(s) 359
Fnu4HI GCNGC 6 cut(s) 152, 188, 191, 1264, 1361, 1592
FokI GGATG 1 cut(s) 686
Fsp4HI GCNGC 6 cut(s) 152, 188, 191, 1264, 1361, 1592
FspBI CTAG 4 cut(s) 1181, 1197, 1295, 1449
GlaI GCGC 1 cut(s) 603
GluI GCNGC 6 cut(s) 152, 188, 191, 1264, 1361, 1592
GsuI CTGGAG 1 cut(s) 176
HaeIII GGCC 4 cut(s) 916, 1145, 1432, 1544
HapII CCGG 1 cut(s) 113
HgaI GACGC 2 cut(s) 118, 1390
HhaI GCGC 1 cut(s) 604
Hin1I GRCGYC 1 cut(s) 110
Hin1II CATG 6 cut(s) 47, 563, 945, 1150, 1333, 1437
Hin6I GCGC 1 cut(s) 602
HinP1I GCGC 1 cut(s) 602
HincII GTYRAC 1 cut(s) 360
HindII GTYRAC 1 cut(s) 360
HindIII AAGCTT 2 cut(s) 308, 1238
HinfI GANTC 8 cut(s) 49, 361, 370, 664, 1049, 1173, 1511, 1616
HpaII CCGG 1 cut(s) 113
HphI GGTGA 4 cut(s) 517, 736, 767, 1421
Hpy166II GTNNAC 1 cut(s) 360
Hpy188I TCNGA 8 cut(s) 175, 500, 537, 643, 928, 1084, 1615, 1621
Hpy188III TCNNGA 8 cut(s) 374, 395, 668, 1061, 1070, 1234, 1376, 1597
Hpy8I GTNNAC 1 cut(s) 360
Hpy99I CGWCG 1 cut(s) 112
HpyAV CCTTC 7 cut(s) 406, 744, 1041, 1147, 1196, 1336, 1616
HpyCH4III ACNGT 6 cut(s) 200, 216, 302, 519, 724, 971
HpyCH4IV ACGT 1 cut(s) 245
HpyCH4V TGCA 9 cut(s) 187, 210, 278, 345, 955, 1211, 1219, 1286, 1300
HpyF10VI GCNNNNNNNGC 5 cut(s) 479, 488, 961, 1073, 1369
HpyF3I CTNAG 5 cut(s) 497, 1107, 1377, 1517, 1587
HpySE526I ACGT 1 cut(s) 245
Hsp92I GRCGYC 1 cut(s) 110
Hsp92II CATG 6 cut(s) 47, 563, 945, 1150, 1333, 1437
HspAI GCGC 1 cut(s) 602
Kzo9I GATC 5 cut(s) 27, 286, 334, 532, 1084
LmnI GCTCC 4 cut(s) 115, 462, 1129, 1271
Lsp1109I GCAGC 6 cut(s) 138, 199, 202, 1250, 1372, 1603
LweI GCATC 5 cut(s) 589, 847, 1054, 1063, 1309
MaeI CTAG 4 cut(s) 1181, 1197, 1295, 1449
MaeII ACGT 1 cut(s) 245
MaeIII GTNAC 2 cut(s) 787, 1454
MalI GATC 5 cut(s) 29, 288, 336, 534, 1086
MboI GATC 5 cut(s) 27, 286, 334, 532, 1084
MboII GAAGA 7 cut(s) 437, 673, 787, 1262, 1295, 1534, 1574
MflI RGATCY 3 cut(s) 27, 334, 532
MhlI GDGCHC 1 cut(s) 251
MlyI GAGTC 3 cut(s) 355, 1043, 1167
MmeI TCCRAC 2 cut(s) 402, 906
Mph1103I ATGCAT 1 cut(s) 1213
MroXI GAANNNNTTC 1 cut(s) 820
MseI TTAA 9 cut(s) 314, 329, 435, 510, 770, 1002, 1347, 1356, 1365
MslI CAYNNNNRTG 2 cut(s) 725, 1274
MspI CCGG 1 cut(s) 113
MspR9I CCNGG 1 cut(s) 529
Mva1269I GAATGC 2 cut(s) 475, 1213
MvaI CCWGG 1 cut(s) 529
MwoI GCNNNNNNNGC 5 cut(s) 479, 488, 961, 1073, 1369
NcoI CCATGG 2 cut(s) 1146, 1433
NdeII GATC 5 cut(s) 27, 286, 334, 532, 1084
NlaIII CATG 6 cut(s) 47, 563, 945, 1150, 1333, 1437
NlaIV GGNNCC 3 cut(s) 336, 464, 549
NmuCI GTSAC 1 cut(s) 1454
NsiI ATGCAT 1 cut(s) 1213
PaqCI CACCTGC 1 cut(s) 49
PctI GAATGC 2 cut(s) 475, 1213
PdmI GAANNNNTTC 1 cut(s) 820
PfeI GAWTC 5 cut(s) 49, 370, 664, 1511, 1616
PkrI GCNGC 6 cut(s) 153, 189, 192, 1265, 1362, 1593
PleI GAGTC 3 cut(s) 355, 1043, 1167
PpsI GAGTC 3 cut(s) 355, 1043, 1167
PshBI ATTAAT 1 cut(s) 435
Psp6I CCWGG 1 cut(s) 527
PspGI CCWGG 1 cut(s) 527
PspN4I GGNNCC 3 cut(s) 336, 464, 549
PspPI GGNCC 1 cut(s) 915
PsrI GAACNNNNNNTAC 2 cut(s) 56, 88
PstI CTGCAG 1 cut(s) 1288
PsuI RGATCY 3 cut(s) 27, 334, 532
RsaI GTAC 2 cut(s) 41, 1446
RsaNI GTAC 2 cut(s) 40, 1445
RseI CAYNNNNRTG 2 cut(s) 725, 1274
SalI GTCGAC 1 cut(s) 358
SaqAI TTAA 9 cut(s) 314, 329, 435, 510, 770, 1002, 1347, 1356, 1365
SatI GCNGC 6 cut(s) 152, 188, 191, 1264, 1361, 1592
Sau3AI GATC 5 cut(s) 27, 286, 334, 532, 1084
Sau96I GGNCC 1 cut(s) 915
SchI GAGTC 3 cut(s) 355, 1043, 1167
ScrFI CCNGG 1 cut(s) 529
SduI GDGCHC 1 cut(s) 251
SfaNI GCATC 5 cut(s) 589, 847, 1054, 1063, 1309
SfcI CTRYAG 1 cut(s) 1284
SmiMI CAYNNNNRTG 2 cut(s) 725, 1274
SmlI CTYRAG 2 cut(s) 1068, 1595
SmoI CTYRAG 2 cut(s) 1068, 1595
SsiI CCGC 1 cut(s) 947
SspMI CTAG 4 cut(s) 1181, 1197, 1295, 1449
StyD4I CCNGG 1 cut(s) 527
StyI CCWWGG 3 cut(s) 21, 1146, 1433
TaaI ACNGT 6 cut(s) 200, 216, 302, 519, 724, 971
TaiI ACGT 1 cut(s) 248
TaqI TCGA 2 cut(s) 107, 359
TfiI GAWTC 5 cut(s) 49, 370, 664, 1511, 1616
Tru1I TTAA 9 cut(s) 314, 329, 435, 510, 770, 1002, 1347, 1356, 1365
Tru9I TTAA 9 cut(s) 314, 329, 435, 510, 770, 1002, 1347, 1356, 1365
TscAI CASTG 5 cut(s) 296, 453, 976, 1293, 1581
TseFI GTSAC 1 cut(s) 1454
TseI GCWGC 6 cut(s) 151, 187, 190, 1263, 1360, 1591
Tsp45I GTSAC 1 cut(s) 1454
TspDTI ATGAA 6 cut(s) 41, 788, 822, 988, 1318, 1518
TspGWI ACGGA 2 cut(s) 137, 382
TspRI CASTG 5 cut(s) 296, 453, 976, 1293, 1581
VspI ATTAAT 1 cut(s) 435
XapI RAATTY 1 cut(s) 92
XmiI GTMKAC 1 cut(s) 359
XmnI GAANNNNTTC 1 cut(s) 820
XspI CTAG 4 cut(s) 1181, 1197, 1295, 1449
Zsp2I ATGCAT 1 cut(s) 1213
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.