Rh7BG008600

Domain of unknown function (DUF4283)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
OG0000073
Physical Location & Seq
Reverse (-)
532425 .. 534533
2109 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG008600.1

Sequence Viewer

Length: 1944 bp
ATGGCCCAACAACACCAGAATGGTGAGCTACACCTCACCTTACCCACAGGAGGAGATGTATTGGGAGGTGATACTCTTCTTGTGGGCCTTATCATTTCGGATCGCATCATGCCCCCTCCCACGGTCATTGACATGCTCAACCGAGCATGGGCTGGATTGGGGGCTTTCACCATCGAGCCTTTTGGAGACTGTCGACGTTATGCTATCATGGCCCCAACTGCAGCATCTGCTGACCGTGTCCTTTCAACTGGAATATGGTGCATAAACAGAGCGGTCCTCAGCCACCACAGATGGCCCATAGCGCAACGCCTAGAGCAGATCCCCCTGCACGAGATCACTTTTTGGATACAGATACACGGCCTGTCACCTTTGGAGATGACCAGCAACATTTCTCGCTTTATAGGAACCCAGGCAGGCCGGGTCTTGGACATCGAGGACCCCCTCACCCTGGAAGGCTGGCGTGGTTTTCTCCGAGTCCAAGTGCAGATAGACTCCAGGGAACCCCTCTTCCCGGGCTTTTGGCATCACCCCCAAGCTAGAGATCCGGTTGTTCCACCCCTAACTGAAAACCTGTTGATGGAAGCTCCGGAGTTTCAACACCCAGCTGACCAACGCATGCCGGACCAATCTGACGAAATCTGGGTGGAAATCAGATATGAGCGTCTTTCTGACTTTTGTTACTTATGTGGCCGCCTTGGCCATACGGCCAACTCCTGCTCACATCCTACCCATCCTTCAACCCACAGATTTGGCCCGTGGATGACCACTCCAACAGCCAGACGGGTGGTGCCTGCTCCAACCCAACGACAGCTTGGATGGGAACAATGTGAAAACCAGTATTTTGATAGCAGAAGAAGACGATGGGACAATCGAAGGCATGAAACTGACTGGTCTGTCAGATACCGACAAGGAGAAGAGGAACGATCCGCTCCCACCCCCCAAGGCTCTGGGCGGCGCTCAACACCCCAGAAAACACCACTCAGCGGGCCACTCTTCAGCCTCCCATCTCCTCACAACATCCGACCCAGCCCTCACCTTCCTCATATCTCCATCTTGTTACAGAAACGGGGCAAAGCAGCAACCCCCCCCAATATGGTGGACAAAGGCAAGGCCATTTTGGTTGAACAATCTCCGGATCTCCCCCCTGGGCCGGCCACTGCCATTCTCAGTCCAGCAGAAATGGATCTTGCCGACTTAGACCTCGCCATCGCTCTCTCTCTGGAAAACAAAGGCAAAACTCCGATGATCGAGTTCCCAGCTGAAACCCTAGACCCGGCTCTCCTCTCTGCTGTTGATGTGAATATCGAAGACATGGACTATGCAATTGCTCTGTCTATTGCTGATATGGATTTCCCCTCTCCACCCCCTGATCAGGTTCATCACTTCCCTTTTTCCTCACCCTCCCCTGATACCCCGAACCTCGATCTCTTTCCAGACACTCTTATCTCTACCTCCACAACTCTCACCTTAACATCTTCATCATCTCACCATCAGACTATTGATGAGCCTTCTCCCCCTCTCCCTCACCCTACTGAAGACCCAAACTTCCCCATCACAGCTCCCCTCAAGGTTCTATCTCAACAGTTCAAACAACTCCAGCTACGAAAGCGACACCTCGTGGAGGAAACCGAAACGGAAGTAATCCTCAAGAAGTCTCGATACCAGCTGCTCCCTCCTACTGAGGATGAAGATGAACCAGCCCCTCCCACCTCTCTTCAACCAACTCTGGATCTTGGGCTTCCTCCAGCTCCCCCTTTGTCCATCCCCAATCTCACGCCTGCACCTACCAGACGGGGTAGGCCACGAATCCACCCCGCCAACCCTCGCGGTAGAGGAAGAGCTCGGAGAGGTGATCGAACTGGCAGAGGTCGATCAGCAGCTTCGGTCACTAGCCTTCACACGACACAGGTCAGTGGCTCCATCCTGGACTCAGGGCAACTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 zf-CCHC_4 zf-RING_2

Protein Analysis

647

Amino Acids

71.98

Weight (kDa)

6.09

Isoelectric Point (pI)

65.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-CCHC_4 PF14392 209 - 240 1.4e-09 Zinc knuckle
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000073)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17821 FvH4_2g04610 FvH4_2g09611 FvH4_2g13563 FvH4_3g21493 FvH4_3g32115 FvH4_3g35060 FvH4_4g00220 FvH4_4g06410 FvH4_4g10367 FvH4_4g10367 FvH4_4g10367 FvH4_5g06101 FvH4_5g08842 FvH4_5g27366 FvH4_5g31283 FvH4_6g11611 FvH4_6g23032 FvH4_7g05661 FvH4_7g06172
malus_domestica MD13G1263700.v1.1
prunus_persica Prupe.1G292300_v2.0.a1 Prupe.5G009700_v2.0.a1 Prupe.6G158100_v2.0.a1 Prupe.8G025100_v2.0.a1 Prupe.8G042600_v2.0.a1
pyrus_communis pycom02g02250 pycom02g16030 pycom05g10490 pycom09g06450 pycom09g06460 pycom13g26200 pycom16g17700
rosa_chinensis RchiOBHm_Chr2g0163321 RchiOBHm_Chr4g0401981 RchiOBHm_Chr5g0005991 RchiOBHm_Chr5g0027191 RchiOBHm_Chr6g0249771
rosa_laevigata RLG00000001040 RLG00000001764 RLG00000002239 RLG00000002240 RLG00000003259 RLG00000008993 RLG00000013847 RLG00000014178 RLG00000015576 RLG00000017269 RLG00000017355 RLG00000018127 RLG00000018602 RLG00000018615 RLG00000019904 RLG00000020044 RLG00000021849 RLG00000021850 RLG00000027965 RLG00000029266 RLG00000029820 RLG00000031112 RLG00000031915 RLG00000033568 RLG00000035013 RLG00000035677 RLG00000036568 RLG00000036628
rosa_multiflora Rmu_co8254085.1_g000001 Rmu_co8462383.1_g000001 Rmu_sc0000185.1_g000049 Rmu_sc0000251.1_g000018 Rmu_sc0000367.1_g000094 Rmu_sc0000498.1_g000023 Rmu_sc0000868.1_g000005 Rmu_sc0001521.1_g000047 Rmu_sc0001534.1_g000007 Rmu_sc0002014.1_g000012 Rmu_sc0003214.1_g000009 Rmu_sc0003573.1_g000041 Rmu_sc0003832.1_g000023 Rmu_sc0004677.1_g000015 Rmu_sc0004967.1_g000014 Rmu_sc0005426.1_g000001 Rmu_sc0005621.1_g000004 Rmu_sc0005640.1_g000009 Rmu_sc0005947.1_g000034 Rmu_sc0006889.1_g000011 Rmu_sc0007121.1_g000014 Rmu_sc0009191.1_g000017 Rmu_sc0010556.1_g000011 Rmu_sc0011396.1_g000007 Rmu_sc0019862.1_g000002 Rmu_sc0022931.1_g000003 Rmu_sc0024164.1_g000001 Rmu_ssc0000391.1_g000027
rosa_roxburghii Rroxscaffold_1G00050060 Rroxscaffold_1G00061810 Rroxscaffold_2G00109590 Rroxscaffold_2G00113810 Rroxscaffold_2G00124040 Rroxscaffold_2G00143620 Rroxscaffold_2G00154760 Rroxscaffold_4G00302820 Rroxscaffold_4G00302830 Rroxscaffold_4G00308680 Rroxscaffold_4G00310240 Rroxscaffold_4G00327890 Rroxscaffold_5G00334600 Rroxscaffold_5G00336050 Rroxscaffold_5G00346560 Rroxscaffold_5G00347860 Rroxscaffold_5G00347870 Rroxscaffold_5G00349330 Rroxscaffold_5G00351980 Rroxscaffold_6G00395280 Rroxscaffold_6G00396750 Rroxscaffold_6G00402910 Rroxscaffold_7G00174790 Rroxscaffold_7G00177570 Rroxscaffold_7G00191820 Rroxscaffold_7G00203480 Rroxscaffold_7G00204380
rosa_rugosa Rorug01G0106600 Rorug01G0106600 Rorug01G0148500.1 Rorug02G0224200 Rorug02G0225500 Rorug02G0233000 Rorug02G0630400 Rorug03G0198000 Rorug03G0232600.1 Rorug03G0240500 Rorug04G0032900 Rorug04G0073300 Rorug04G0118500 Rorug04G0149600.1 Rorug04G0205100 Rorug04G0256700 Rorug05G0020200 Rorug05G0050000 Rorug05G0247300 Rorug05G0295100 Rorug05G0337900 Rorug05G0542600 Rorug06G0034800 Rorug06G0035100 Rorug06G0220100 Rorug07G0091900 Rorug07G0271200
rosa_samantha Rh1AG118200 Rh1AG253000 Rh1AG296300 Rh1AG409000 Rh1AG410600 Rh1BG073400 Rh1BG130400 Rh1BG147300 Rh1BG163600 Rh1CG016000 Rh1DG012200 Rh1DG012300 Rh1DG078600 Rh1DG078800 Rh1DG138100 Rh1DG179200 Rh1DG192600 Rh1DG194500 Rh1DG194600 Rh1DG214300 Rh1DG245900 Rh1DG267000 Rh1DG322700 Rh1DG442700 Rh2AG282000 Rh2AG423000 Rh2AG423100 Rh2AG460700 Rh2AG466200 Rh2AG513400 Rh2AG547000 Rh2BG277800 Rh2BG281200 Rh2BG298300 Rh2BG304300 Rh2BG433500 Rh2CG276000 Rh2CG282600 Rh2CG325500 Rh2CG393000 Rh2DG319200 Rh2DG443400 Rh3AG169300 Rh3AG303600 Rh3BG195000 Rh3BG282600 Rh3BG343400 Rh3BG343500 Rh3BG344100 Rh3CG111700 Rh3CG185700 Rh3CG259100 Rh3CG293000 Rh3CG317900 Rh3CG340900 Rh3CG341000 Rh3CG341100 Rh3CG354700 Rh3CG359200 Rh3CG368100 Rh3DG179900 Rh3DG288700 Rh3DG302600 Rh3DG316000 Rh3DG324500 Rh3DG324600 Rh3DG343200 Rh3DG343300 Rh3DG362400 Rh4AG071800 Rh4BG034000 Rh4BG044300 Rh4BG044400 Rh4BG069600 Rh4BG157400 Rh4CG007000 Rh4CG030400 Rh4CG037900 Rh4CG077700 Rh4CG115000 Rh4CG162400 Rh4CG162500 Rh4CG165500 Rh4CG165600 Rh4CG172900 Rh4CG239700 Rh4DG055900 Rh4DG173200 Rh5AG354900 Rh5AG511100 Rh5BG112600 Rh5BG541000 Rh5BG541100 Rh5BG549300 Rh5CG004400 Rh5CG315000 Rh5CG563800 Rh5CG572100 Rh5DG112200 Rh5DG191300 Rh5DG407600 Rh5DG407700 Rh5DG567500 Rh6AG002600 Rh6AG051400 Rh6AG199800 Rh6AG199900 Rh6AG206200 Rh6AG391000 Rh6AG391100 Rh6BG007500 Rh6BG053400 Rh6BG225900 Rh6BG227100 Rh6BG232400 Rh6CG091100 Rh6CG125400 Rh6CG186700 Rh6CG222700 Rh6CG222800 Rh6CG235500 Rh6CG247200 Rh6CG331200 Rh6CG465100 Rh6DG183500 Rh6DG213500 Rh6DG238800 Rh6DG263700 Rh7AG211800 Rh7AG441800 Rh7BG008600 Rh7BG253000 Rh7BG390000 Rh7CG189600 Rh7CG401500 Rh7CG424200 Rh7CG428700 Rh7CG479800 Rh7CG494300 Rh7DG177000 Rh7DG218700 Rh7DG254000 Rh7DG294800 Rh7DG407200 Rh7DG448800 Rh7DG461500
rosa_wichuraiana Rw0G012180 Rw1G005270 Rw1G012310 Rw1G016890 Rw1G021700 Rw2G014380 Rw2G027690 Rw3G016400 Rw3G028230 Rw3G029320 Rw4G002060 Rw4G002100 Rw4G003980 Rw4G014140 Rw4G014770 Rw4G014780 Rw4G015760 Rw4G021230 Rw5G000520 Rw5G035610 Rw6G001680 Rw6G017890 Rw6G027440 Rw6G034130 Rw6G034170 Rw7G012430 Rw7G033870

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 893
AccB1I GGYRCC 1 cut(s) 787
AccBSI CCGCTC 2 cut(s) 272, 929
AccI GTMKAC 1 cut(s) 193
AccII CGCG 1 cut(s) 1827
AccIII TCCGGA 2 cut(s) 586, 1132
AciI CCGC 7 cut(s) 272, 691, 927, 952, 984, 1815, 1827
AclWI GGATC 7 cut(s) 108, 313, 536, 918, 1143, 1191, 1737
AcoI YGGCCR 4 cut(s) 688, 697, 705, 1152
AcuI CTGAAG 2 cut(s) 979, 1554
AdeI CACNNNGTG 1 cut(s) 1618
AgsI TTSAA 6 cut(s) 246, 596, 738, 1124, 1588, 1718
AjnI CCWGG 5 cut(s) 408, 447, 494, 1144, 1923
AloI GAACNNNNNNTCC 2 cut(s) 492, 524
Alw21I GWGCWC 1 cut(s) 1843
Alw26I GTCTC 2 cut(s) 180, 1659
AlwI GGATC 7 cut(s) 108, 313, 536, 918, 1143, 1191, 1737
AlwNI CAGNNNCTG 1 cut(s) 227
Ama87I CYCGRG 1 cut(s) 511
Aor13HI TCCGGA 2 cut(s) 586, 1132
ApeKI GCWGC 4 cut(s) 221, 1076, 1666, 1877
AspLEI GCGC 2 cut(s) 304, 957
AsuC2I CCSGG 4 cut(s) 419, 512, 513, 1274
AvaI CYCGRG 1 cut(s) 511
AvaII GGWCC 3 cut(s) 274, 436, 622
BalI TGGCCA 1 cut(s) 699
BanI GGYRCC 1 cut(s) 787
BanII GRGCYC 1 cut(s) 1843
BarI GAAGNNNNNNTAC 2 cut(s) 1643, 1675
BauI CACGAG 2 cut(s) 329, 1616
BbsI GAAGAC 3 cut(s) 862, 1314, 1542
Bbv12I GWGCWC 1 cut(s) 1843
BbvCI CCTCAGC 1 cut(s) 278
BbvI GCAGC 4 cut(s) 233, 1088, 1653, 1889
BceAI ACGGC 2 cut(s) 373, 720
BciT130I CCWGG 5 cut(s) 410, 449, 496, 1146, 1925
BciVI GTATCC 1 cut(s) 339
BclI TGATCA 1 cut(s) 1369
BcnI CCSGG 4 cut(s) 419, 512, 513, 1274
BcoDI GTCTC 2 cut(s) 180, 1659
BfaI CTAG 4 cut(s) 311, 537, 1268, 1890
BfmI CTRYAG 1 cut(s) 219
BfoI RGCGCY 1 cut(s) 958
BfuI GTATCC 1 cut(s) 339
BglI GCCNNNNNGGC 1 cut(s) 696
BisI GCNGC 6 cut(s) 222, 691, 953, 1077, 1667, 1878
BlsI GCNGC 6 cut(s) 223, 692, 954, 1078, 1668, 1879
Bme1390I CCNGG 9 cut(s) 410, 419, 449, 496, 512, 513, 1146, 1274, 1925
Bme18I GGWCC 3 cut(s) 274, 436, 622
BmeT110I CYCGRG 1 cut(s) 511
BmiI GGNNCC 6 cut(s) 213, 406, 438, 501, 789, 1918
BmrFI CCNGG 9 cut(s) 410, 419, 449, 496, 512, 513, 1146, 1274, 1925
BmsI GCATC 3 cut(s) 114, 233, 532
BoxI GACNNNNGTC 1 cut(s) 1907
BpiI GAAGAC 3 cut(s) 862, 1314, 1542
BplI GAGNNNNNCTC 2 cut(s) 261, 293
BpmI CTGGAG 3 cut(s) 478, 1580, 1728
Bpu10I CCTNAGC 1 cut(s) 278
BpuEI CTTGAG 2 cut(s) 1550, 1631
BpuMI CCSGG 4 cut(s) 419, 512, 513, 1274
BsaWI WCCGGW 3 cut(s) 544, 586, 1132
BsaXI ACNNNNNCTCC 2 cut(s) 42, 72
Bse118I RCCGGY 1 cut(s) 1150
Bse1I ACTGG 4 cut(s) 253, 835, 893, 1864
BseAI TCCGGA 2 cut(s) 586, 1132
BseBI CCWGG 5 cut(s) 410, 449, 496, 1146, 1925
BseGI GGATG 8 cut(s) 721, 730, 765, 821, 1017, 1690, 1761, 1920
BseMII CTCAG 5 cut(s) 292, 994, 1180, 1671, 1944
BseNI ACTGG 4 cut(s) 253, 835, 893, 1864
BseRI GAGGAG 3 cut(s) 66, 999, 1271
BseXI GCAGC 4 cut(s) 233, 1088, 1653, 1889
BseYI CCCAGC 3 cut(s) 601, 1025, 1255
BsgI GTGCAG 3 cut(s) 311, 503, 1764
Bsh1236I CGCG 1 cut(s) 1827
BshNI GGYRCC 1 cut(s) 787
BsiHKAI GWGCWC 1 cut(s) 1843
BsiHKCI CYCGRG 1 cut(s) 511
BsiSI CCGG 8 cut(s) 418, 512, 545, 587, 620, 1133, 1151, 1274
BslFI GGGAC 1 cut(s) 878
BsmAI GTCTC 2 cut(s) 180, 1659
BsmFI GGGAC 1 cut(s) 878
BsoBI CYCGRG 1 cut(s) 511
Bsp1286I GDGCHC 1 cut(s) 1843
Bsp13I TCCGGA 2 cut(s) 586, 1132
BspACI CCGC 7 cut(s) 272, 691, 927, 952, 984, 1815, 1827
BspCNI CTCAG 5 cut(s) 291, 993, 1179, 1672, 1943
BspEI TCCGGA 2 cut(s) 586, 1132
BspFNI CGCG 1 cut(s) 1827
BspLI GGNNCC 6 cut(s) 213, 406, 438, 501, 789, 1918
BspMAI CTGCAG 1 cut(s) 223
BspPI GGATC 7 cut(s) 108, 313, 536, 918, 1143, 1191, 1737
BspQI GCTCTTC 1 cut(s) 1831
BspT107I GGYRCC 1 cut(s) 787
BsrBI CCGCTC 2 cut(s) 272, 929
BsrFI RCCGGY 1 cut(s) 1150
BsrI ACTGG 4 cut(s) 253, 835, 893, 1864
BssAI RCCGGY 1 cut(s) 1150
BssSI CACGAG 2 cut(s) 329, 1616
BssT1I CCWWGG 2 cut(s) 694, 940
Bst2BI CACGAG 2 cut(s) 329, 1616
Bst2UI CCWGG 5 cut(s) 410, 449, 496, 1146, 1925
Bst4CI ACNGT 5 cut(s) 124, 191, 236, 1584, 1941
Bst6I CTCTTC 6 cut(s) 81, 512, 909, 998, 1719, 1831
BstAPI GCANNNNNTGC 1 cut(s) 227
BstC8I GCNNGC 7 cut(s) 415, 458, 617, 792, 986, 1152, 1779
BstDEI CTNAG 6 cut(s) 278, 980, 1166, 1195, 1680, 1930
BstDSI CCRYGG 2 cut(s) 120, 755
BstENI CCTNNNNNAGG 1 cut(s) 1619
BstF5I GGATG 8 cut(s) 721, 730, 765, 821, 1017, 1690, 1761, 1920
BstFNI CGCG 1 cut(s) 1827
BstH2I RGCGCY 1 cut(s) 958
BstHHI GCGC 2 cut(s) 304, 957
BstMAI GTCTC 2 cut(s) 180, 1659
BstMWI GCNNNNNNNGC 6 cut(s) 209, 218, 227, 301, 696, 1606
BstNI CCWGG 5 cut(s) 410, 449, 496, 1146, 1925
BstNSI RCATGY 2 cut(s) 136, 619
BstPAI GACNNNNGTC 1 cut(s) 1907
BstSCI CCNGG 9 cut(s) 408, 417, 447, 494, 510, 511, 1144, 1272, 1923
BstSFI CTRYAG 1 cut(s) 219
BstUI CGCG 1 cut(s) 1827
BstV1I GCAGC 4 cut(s) 233, 1088, 1653, 1889
BstV2I GAAGAC 3 cut(s) 862, 1314, 1542
BstX2I RGATCY 5 cut(s) 318, 541, 1135, 1183, 1729
BstXI CCANNNNNNTGG 4 cut(s) 749, 784, 947, 1096
BstYI RGATCY 5 cut(s) 318, 541, 1135, 1183, 1729
BsuI GTATCC 1 cut(s) 339
BtgI CCRYGG 2 cut(s) 120, 755
BtgZI GCGATG 1 cut(s) 1192
BtsCI GGATG 8 cut(s) 721, 730, 765, 821, 1017, 1690, 1761, 1920
BtsI GCAGTG 1 cut(s) 1155
BtsIMutI CAGTG 2 cut(s) 1155, 1918
Cac8I GCNNGC 7 cut(s) 415, 458, 617, 792, 986, 1152, 1779
CaiI CAGNNNCTG 1 cut(s) 227
CfoI GCGC 2 cut(s) 304, 957
Cfr10I RCCGGY 1 cut(s) 1150
Cfr9I CCCGGG 1 cut(s) 511
CseI GACGC 1 cut(s) 650
CspCI CAANNNNNGTGG 2 cut(s) 109, 144
CviAII CATG 7 cut(s) 109, 133, 147, 208, 616, 878, 1312
DdeI CTNAG 6 cut(s) 278, 980, 1166, 1195, 1680, 1930
DraIII CACNNNGTG 1 cut(s) 1618
DrdI GACNNNNNNGTC 1 cut(s) 893
DseDI GACNNNNNNGTC 1 cut(s) 893
EaeI YGGCCR 4 cut(s) 688, 697, 705, 1152
Eam1104I CTCTTC 6 cut(s) 81, 512, 909, 998, 1719, 1831
EarI CTCTTC 6 cut(s) 81, 512, 909, 998, 1719, 1831
Ecl136II GAGCTC 1 cut(s) 1841
Eco130I CCWWGG 2 cut(s) 694, 940
Eco24I GRGCYC 1 cut(s) 1843
Eco47I GGWCC 3 cut(s) 274, 436, 622
Eco53kI GAGCTC 1 cut(s) 1841
Eco57I CTGAAG 2 cut(s) 979, 1554
Eco88I CYCGRG 1 cut(s) 511
EcoICRI GAGCTC 1 cut(s) 1841
EcoNI CCTNNNNNAGG 1 cut(s) 1619
EcoO109I RGGNCCY 1 cut(s) 436
EcoRII CCWGG 5 cut(s) 408, 447, 494, 1144, 1923
EcoT14I CCWWGG 2 cut(s) 694, 940
EcoT38I GRGCYC 1 cut(s) 1843
ErhI CCWWGG 2 cut(s) 694, 940
FaeI CATG 7 cut(s) 112, 136, 150, 211, 619, 881, 1315
FaqI GGGAC 1 cut(s) 878
FatI CATG 7 cut(s) 108, 132, 146, 207, 615, 877, 1311
FauI CCCGC 2 cut(s) 977, 1822
FbaI TGATCA 1 cut(s) 1369
FblI GTMKAC 1 cut(s) 193
Fnu4HI GCNGC 6 cut(s) 222, 691, 953, 1077, 1667, 1878
FokI GGATG 8 cut(s) 708, 717, 772, 828, 1004, 1697, 1748, 1907
FriOI GRGCYC 1 cut(s) 1843
FseI GGCCGGCC 1 cut(s) 1154
Fsp4HI GCNGC 6 cut(s) 222, 691, 953, 1077, 1667, 1878
FspBI CTAG 4 cut(s) 311, 537, 1268, 1890
GlaI GCGC 2 cut(s) 303, 956
GluI GCNGC 6 cut(s) 222, 691, 953, 1077, 1667, 1878
GsaI CCCAGC 3 cut(s) 605, 1029, 1259
GsuI CTGGAG 3 cut(s) 478, 1580, 1728
HaeII RGCGCY 1 cut(s) 958
HapII CCGG 8 cut(s) 418, 512, 545, 587, 620, 1133, 1151, 1274
HgaI GACGC 1 cut(s) 650
HhaI GCGC 2 cut(s) 304, 957
Hin1II CATG 7 cut(s) 112, 136, 150, 211, 619, 881, 1315
Hin6I GCGC 2 cut(s) 302, 955
HinP1I GCGC 2 cut(s) 302, 955
HincII GTYRAC 1 cut(s) 194
HindII GTYRAC 1 cut(s) 194
HinfI GANTC 4 cut(s) 474, 491, 1806, 1928
HpaII CCGG 8 cut(s) 418, 512, 545, 587, 620, 1133, 1151, 1274
Hpy166II GTNNAC 2 cut(s) 194, 1099
Hpy188III TCNNGA 7 cut(s) 587, 1133, 1220, 1433, 1648, 1656, 1727
Hpy8I GTNNAC 2 cut(s) 194, 1099
Hpy99I CGWCG 1 cut(s) 198
HpyAV CCTTC 6 cut(s) 446, 744, 867, 1046, 1518, 1904
HpyCH4III ACNGT 5 cut(s) 124, 191, 236, 1584, 1941
HpyCH4IV ACGT 1 cut(s) 196
HpyCH4V TGCA 6 cut(s) 221, 261, 328, 484, 1322, 1781
HpyF10VI GCNNNNNNNGC 6 cut(s) 209, 218, 227, 301, 696, 1606
HpyF3I CTNAG 6 cut(s) 278, 980, 1166, 1195, 1680, 1930
HpySE526I ACGT 1 cut(s) 196
Hsp92II CATG 7 cut(s) 112, 136, 150, 211, 619, 881, 1315
HspAI GCGC 2 cut(s) 302, 955
Kpn2I TCCGGA 2 cut(s) 586, 1132
KroI GCCGGC 1 cut(s) 1150
KroNI GCCGGC 1 cut(s) 1152
Ksp22I TGATCA 1 cut(s) 1369
LguI GCTCTTC 1 cut(s) 1831
LmnI GCTCC 7 cut(s) 589, 799, 934, 1564, 1674, 1753, 1922
Lsp1109I GCAGC 4 cut(s) 233, 1088, 1653, 1889
LweI GCATC 3 cut(s) 114, 233, 532
MaeI CTAG 4 cut(s) 311, 537, 1268, 1890
MaeII ACGT 1 cut(s) 196
MaeIII GTNAC 4 cut(s) 363, 677, 1056, 1885
MbiI CCGCTC 2 cut(s) 272, 929
MfeI CAATTG 1 cut(s) 1323
MflI RGATCY 5 cut(s) 318, 541, 1135, 1183, 1729
MhlI GDGCHC 1 cut(s) 1843
MlsI TGGCCA 1 cut(s) 699
MluCI AATT 1 cut(s) 1323
MluNI TGGCCA 1 cut(s) 699
MlyI GAGTC 3 cut(s) 483, 485, 1922
MmeI TCCRAC 3 cut(s) 794, 821, 1045
Mox20I TGGCCA 1 cut(s) 699
MroI TCCGGA 2 cut(s) 586, 1132
MroNI GCCGGC 1 cut(s) 1150
MscI TGGCCA 1 cut(s) 699
MseI TTAA 1 cut(s) 1469
MslI CAYNNNNRTG 2 cut(s) 18, 131
Msp20I TGGCCA 1 cut(s) 699
MspA1I CMGCKG 4 cut(s) 605, 984, 1259, 1666
MspI CCGG 8 cut(s) 418, 512, 545, 587, 620, 1133, 1151, 1274
MspR9I CCNGG 9 cut(s) 410, 419, 449, 496, 512, 513, 1146, 1274, 1925
MunI CAATTG 1 cut(s) 1323
MvaI CCWGG 5 cut(s) 410, 449, 496, 1146, 1925
MvnI CGCG 1 cut(s) 1827
MwoI GCNNNNNNNGC 6 cut(s) 209, 218, 227, 301, 696, 1606
NaeI GCCGGC 1 cut(s) 1152
NciI CCSGG 4 cut(s) 419, 512, 513, 1274
NgoMIV GCCGGC 1 cut(s) 1150
NlaIII CATG 7 cut(s) 112, 136, 150, 211, 619, 881, 1315
NlaIV GGNNCC 6 cut(s) 213, 406, 438, 501, 789, 1918
NmuCI GTSAC 2 cut(s) 363, 1885
NspI RCATGY 2 cut(s) 136, 619
PaeI GCATGC 1 cut(s) 619
PasI CCCWGGG 1 cut(s) 1145
PciSI GCTCTTC 1 cut(s) 1831
PdiI GCCGGC 1 cut(s) 1152
PfeI GAWTC 1 cut(s) 1806
PflFI GACNNNGTC 1 cut(s) 236
PfoI TCCNGGA 1 cut(s) 1923
PkrI GCNGC 6 cut(s) 223, 692, 954, 1078, 1668, 1879
PleI GAGTC 3 cut(s) 482, 485, 1922
PpsI GAGTC 3 cut(s) 482, 485, 1922
PpuMI RGGWCCY 1 cut(s) 436
PshAI GACNNNNGTC 1 cut(s) 1907
Psp124BI GAGCTC 1 cut(s) 1843
Psp5II RGGWCCY 1 cut(s) 436
Psp6I CCWGG 5 cut(s) 408, 447, 494, 1144, 1923
PspFI CCCAGC 3 cut(s) 601, 1025, 1255
PspGI CCWGG 5 cut(s) 408, 447, 494, 1144, 1923
PspN4I GGNNCC 6 cut(s) 213, 406, 438, 501, 789, 1918
PspPPI RGGWCCY 1 cut(s) 436
PstI CTGCAG 1 cut(s) 223
PstNI CAGNNNCTG 1 cut(s) 227
PsuI RGATCY 5 cut(s) 318, 541, 1135, 1183, 1729
PsyI GACNNNGTC 1 cut(s) 236
PvuII CAGCTG 3 cut(s) 605, 1259, 1666
RigI GGCCGGCC 1 cut(s) 1154
RseI CAYNNNNRTG 2 cut(s) 18, 131
SacI GAGCTC 1 cut(s) 1843
SalI GTCGAC 1 cut(s) 192
SapI GCTCTTC 1 cut(s) 1831
SaqAI TTAA 1 cut(s) 1469
SatI GCNGC 6 cut(s) 222, 691, 953, 1077, 1667, 1878
SchI GAGTC 3 cut(s) 483, 485, 1922
ScrFI CCNGG 9 cut(s) 410, 419, 449, 496, 512, 513, 1146, 1274, 1925
SduI GDGCHC 1 cut(s) 1843
SfaNI GCATC 3 cut(s) 114, 233, 532
SfcI CTRYAG 1 cut(s) 219
SfiI GGCCNNNNNGGCC 1 cut(s) 696
SinI GGWCC 3 cut(s) 274, 436, 622
SmaI CCCGGG 1 cut(s) 513
SmiMI CAYNNNNRTG 2 cut(s) 18, 131
SmlI CTYRAG 2 cut(s) 1565, 1646
SmoI CTYRAG 2 cut(s) 1565, 1646
SphI GCATGC 1 cut(s) 619
Sse9I AATT 1 cut(s) 1323
SsiI CCGC 7 cut(s) 272, 691, 927, 952, 984, 1815, 1827
SspMI CTAG 4 cut(s) 311, 537, 1268, 1890
SstI GAGCTC 1 cut(s) 1843
StyD4I CCNGG 9 cut(s) 408, 417, 447, 494, 510, 511, 1144, 1272, 1923
StyI CCWWGG 2 cut(s) 694, 940
TaaI ACNGT 5 cut(s) 124, 191, 236, 1584, 1941
TaiI ACGT 1 cut(s) 199
TaqII GACCGA 1 cut(s) 1873
TasI AATT 1 cut(s) 1323
TauI GCSGC 2 cut(s) 693, 955
TfiI GAWTC 1 cut(s) 1806
Tru1I TTAA 1 cut(s) 1469
Tru9I TTAA 1 cut(s) 1469
TscAI CASTG 2 cut(s) 1162, 1918
TseFI GTSAC 2 cut(s) 363, 1885
TseI GCWGC 4 cut(s) 221, 1076, 1666, 1877
Tsp45I GTSAC 2 cut(s) 363, 1885
TspDTI ATGAA 5 cut(s) 894, 1367, 1467, 1701, 1707
TspGWI ACGGA 1 cut(s) 1649
TspMI CCCGGG 1 cut(s) 511
TspRI CASTG 2 cut(s) 1162, 1918
Tth111I GACNNNGTC 1 cut(s) 236
VpaK11BI GGWCC 3 cut(s) 274, 436, 622
XagI CCTNNNNNAGG 1 cut(s) 1619
XceI RCATGY 2 cut(s) 136, 619
XcmI CCANNNNNNNNNTGG 1 cut(s) 809
XmaI CCCGGG 1 cut(s) 511
XmiI GTMKAC 1 cut(s) 193
XspI CTAG 4 cut(s) 311, 537, 1268, 1890
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.