Rmu_ssc0000391.1_g000027

Domain of unknown function (DUF4283)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000391.1
OG0000073
Physical Location & Seq
Forward (+)
90852 .. 92450
1599 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000391.1_g000027.1.cds

Sequence Viewer

Length: 1599 bp
atggctgaagatagtagcaatactgataatcttattattcaaatgagagataggctctcaattgggtcttccaaccaaaaggttcgcctggctgctgtgatctttgcagacaaagctccccacaagccatccacaattgatatgatcaaaacagcatgggtaggctttggaggtatcaaaatcacagccagggatctttggaaccccgctgaccacctttttgcgatcactgccgatgatgaaaatgtcgccaagctgatcctagacaactccccatggaccatcaaaggcttctcccttcatgtccaggtgtggcctcccactttagctattgaagaactaccatctcatgaaatcggtttctgggttcaaatgatgggtgtccctccctatatgtctgctgtatcaaatgtgagaggtatggtagaaagatttggtgttttcattgagatggaggatccacttgaaggggaggagggtactttccccttccttagagttcgtatgctaattgatgctaggaaacccatacctactggtttcaagcttccaagagagaatgggtctgtttcttgggtggaattccggtacgaaaagttggtaaaattttgttttgtatgtggaagacttggtcatgtggactcttctagattcccatgccccaatggtcgtgaaccagggtacgaagaagaagaatatggagctttcatggctattgacgcccttcgccgtccagttattcctccaaacacccctcaatcggaatcccggcctgcccgtgggagatctgctggacaagtcattggtccaccgggttttgaaactactggacaaaggcccacttctcaatgcaacttgagcaacaagagtcacatgaccgttgagaaatgcagtgtggagtggcacaaaccccacaatcctgacagagtcatcaccgcatcaactttgccgtgttcaactaaaggtaatcctgctcctactcagaccatatccttcccttctctgtcactgcaaccccatcattcccccttagacaactcattgaatcctatgttctccatcccaaaccaagtgaatttttggccaaattatccccacctcatgcaagtaccacctcaccaactcccacatcttttttctgcacccccaaatcaccctactggcccaccctttaatgatgcctccactcacatgttccaggttcccaagtcttttaatcagatgcctatgggtgctacactaccccatcacatggcaatgcagttccatgcatacccatccatggttgagtatttttccaacttggcaaacccagggtaccacaacaagcccacataccagaactacccatcttctagccaaggcccaatttctctgaaaagagcctccccacatgtgaacactttgggtccaaacataacacgttcccgaaaaaaatataaacgtgtcaccaagcctaaaccaagcaatttgaaagaacaaggtgatgtggctactaatgagctcagctcaagtgaggaggcttctgatgcttcaatggttggaggcatttcccttcaaggcggtggtggctggccaacagccacaaggtcaccatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 zf-CCHC_4 zf-RING_2

Protein Analysis

532

Amino Acids

58.97

Weight (kDa)

8.41

Isoelectric Point (pI)

45.24

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000073)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17821 FvH4_2g04610 FvH4_2g09611 FvH4_2g13563 FvH4_3g21493 FvH4_3g32115 FvH4_3g35060 FvH4_4g00220 FvH4_4g06410 FvH4_4g10367 FvH4_4g10367 FvH4_4g10367 FvH4_5g06101 FvH4_5g08842 FvH4_5g27366 FvH4_5g31283 FvH4_6g11611 FvH4_6g23032 FvH4_7g05661 FvH4_7g06172
malus_domestica MD13G1263700.v1.1
prunus_persica Prupe.1G292300_v2.0.a1 Prupe.5G009700_v2.0.a1 Prupe.6G158100_v2.0.a1 Prupe.8G025100_v2.0.a1 Prupe.8G042600_v2.0.a1
pyrus_communis pycom02g02250 pycom02g16030 pycom05g10490 pycom09g06450 pycom09g06460 pycom13g26200 pycom16g17700
rosa_chinensis RchiOBHm_Chr2g0163321 RchiOBHm_Chr4g0401981 RchiOBHm_Chr5g0005991 RchiOBHm_Chr5g0027191 RchiOBHm_Chr6g0249771
rosa_laevigata RLG00000001040 RLG00000001764 RLG00000002239 RLG00000002240 RLG00000003259 RLG00000008993 RLG00000013847 RLG00000014178 RLG00000015576 RLG00000017269 RLG00000017355 RLG00000018127 RLG00000018602 RLG00000018615 RLG00000019904 RLG00000020044 RLG00000021849 RLG00000021850 RLG00000027965 RLG00000029266 RLG00000029820 RLG00000031112 RLG00000031915 RLG00000033568 RLG00000035013 RLG00000035677 RLG00000036568 RLG00000036628
rosa_multiflora Rmu_co8254085.1_g000001 Rmu_co8462383.1_g000001 Rmu_sc0000185.1_g000049 Rmu_sc0000251.1_g000018 Rmu_sc0000367.1_g000094 Rmu_sc0000498.1_g000023 Rmu_sc0000868.1_g000005 Rmu_sc0001521.1_g000047 Rmu_sc0001534.1_g000007 Rmu_sc0002014.1_g000012 Rmu_sc0003214.1_g000009 Rmu_sc0003573.1_g000041 Rmu_sc0003832.1_g000023 Rmu_sc0004677.1_g000015 Rmu_sc0004967.1_g000014 Rmu_sc0005426.1_g000001 Rmu_sc0005621.1_g000004 Rmu_sc0005640.1_g000009 Rmu_sc0005947.1_g000034 Rmu_sc0006889.1_g000011 Rmu_sc0007121.1_g000014 Rmu_sc0009191.1_g000017 Rmu_sc0010556.1_g000011 Rmu_sc0011396.1_g000007 Rmu_sc0019862.1_g000002 Rmu_sc0022931.1_g000003 Rmu_sc0024164.1_g000001 Rmu_ssc0000391.1_g000027
rosa_roxburghii Rroxscaffold_1G00050060 Rroxscaffold_1G00061810 Rroxscaffold_2G00109590 Rroxscaffold_2G00113810 Rroxscaffold_2G00124040 Rroxscaffold_2G00143620 Rroxscaffold_2G00154760 Rroxscaffold_4G00302820 Rroxscaffold_4G00302830 Rroxscaffold_4G00308680 Rroxscaffold_4G00310240 Rroxscaffold_4G00327890 Rroxscaffold_5G00334600 Rroxscaffold_5G00336050 Rroxscaffold_5G00346560 Rroxscaffold_5G00347860 Rroxscaffold_5G00347870 Rroxscaffold_5G00349330 Rroxscaffold_5G00351980 Rroxscaffold_6G00395280 Rroxscaffold_6G00396750 Rroxscaffold_6G00402910 Rroxscaffold_7G00174790 Rroxscaffold_7G00177570 Rroxscaffold_7G00191820 Rroxscaffold_7G00203480 Rroxscaffold_7G00204380
rosa_rugosa Rorug01G0106600 Rorug01G0106600 Rorug01G0148500.1 Rorug02G0224200 Rorug02G0225500 Rorug02G0233000 Rorug02G0630400 Rorug03G0198000 Rorug03G0232600.1 Rorug03G0240500 Rorug04G0032900 Rorug04G0073300 Rorug04G0118500 Rorug04G0149600.1 Rorug04G0205100 Rorug04G0256700 Rorug05G0020200 Rorug05G0050000 Rorug05G0247300 Rorug05G0295100 Rorug05G0337900 Rorug05G0542600 Rorug06G0034800 Rorug06G0035100 Rorug06G0220100 Rorug07G0091900 Rorug07G0271200
rosa_samantha Rh1AG118200 Rh1AG253000 Rh1AG296300 Rh1AG409000 Rh1AG410600 Rh1BG073400 Rh1BG130400 Rh1BG147300 Rh1BG163600 Rh1CG016000 Rh1DG012200 Rh1DG012300 Rh1DG078600 Rh1DG078800 Rh1DG138100 Rh1DG179200 Rh1DG192600 Rh1DG194500 Rh1DG194600 Rh1DG214300 Rh1DG245900 Rh1DG267000 Rh1DG322700 Rh1DG442700 Rh2AG282000 Rh2AG423000 Rh2AG423100 Rh2AG460700 Rh2AG466200 Rh2AG513400 Rh2AG547000 Rh2BG277800 Rh2BG281200 Rh2BG298300 Rh2BG304300 Rh2BG433500 Rh2CG276000 Rh2CG282600 Rh2CG325500 Rh2CG393000 Rh2DG319200 Rh2DG443400 Rh3AG169300 Rh3AG303600 Rh3BG195000 Rh3BG282600 Rh3BG343400 Rh3BG343500 Rh3BG344100 Rh3CG111700 Rh3CG185700 Rh3CG259100 Rh3CG293000 Rh3CG317900 Rh3CG340900 Rh3CG341000 Rh3CG341100 Rh3CG354700 Rh3CG359200 Rh3CG368100 Rh3DG179900 Rh3DG288700 Rh3DG302600 Rh3DG316000 Rh3DG324500 Rh3DG324600 Rh3DG343200 Rh3DG343300 Rh3DG362400 Rh4AG071800 Rh4BG034000 Rh4BG044300 Rh4BG044400 Rh4BG069600 Rh4BG157400 Rh4CG007000 Rh4CG030400 Rh4CG037900 Rh4CG077700 Rh4CG115000 Rh4CG162400 Rh4CG162500 Rh4CG165500 Rh4CG165600 Rh4CG172900 Rh4CG239700 Rh4DG055900 Rh4DG173200 Rh5AG354900 Rh5AG511100 Rh5BG112600 Rh5BG541000 Rh5BG541100 Rh5BG549300 Rh5CG004400 Rh5CG315000 Rh5CG563800 Rh5CG572100 Rh5DG112200 Rh5DG191300 Rh5DG407600 Rh5DG407700 Rh5DG567500 Rh6AG002600 Rh6AG051400 Rh6AG199800 Rh6AG199900 Rh6AG206200 Rh6AG391000 Rh6AG391100 Rh6BG007500 Rh6BG053400 Rh6BG225900 Rh6BG227100 Rh6BG232400 Rh6CG091100 Rh6CG125400 Rh6CG186700 Rh6CG222700 Rh6CG222800 Rh6CG235500 Rh6CG247200 Rh6CG331200 Rh6CG465100 Rh6DG183500 Rh6DG213500 Rh6DG238800 Rh6DG263700 Rh7AG211800 Rh7AG441800 Rh7BG008600 Rh7BG253000 Rh7BG390000 Rh7CG189600 Rh7CG401500 Rh7CG424200 Rh7CG428700 Rh7CG479800 Rh7CG494300 Rh7DG177000 Rh7DG218700 Rh7DG254000 Rh7DG294800 Rh7DG407200 Rh7DG448800 Rh7DG461500
rosa_wichuraiana Rw0G012180 Rw1G005270 Rw1G012310 Rw1G016890 Rw1G021700 Rw2G014380 Rw2G027690 Rw3G016400 Rw3G028230 Rw3G029320 Rw4G002060 Rw4G002100 Rw4G003980 Rw4G014140 Rw4G014770 Rw4G014780 Rw4G015760 Rw4G021230 Rw5G000520 Rw5G035610 Rw6G001680 Rw6G017890 Rw6G027440 Rw6G034130 Rw6G034170 Rw7G012430 Rw7G033870

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1317
AccB1I GGYRCC 1 cut(s) 1317
AccB7I CCANNNNNTGG 1 cut(s) 1252
AciI CCGC 3 cut(s) 207, 936, 1563
AclWI GGATC 4 cut(s) 201, 253, 452, 465
AcoI YGGCCR 2 cut(s) 1082, 1574
AcsI RAATTY 3 cut(s) 581, 605, 1075
AcuI CTGAAG 1 cut(s) 27
AcyI GRCGYC 1 cut(s) 720
AfaI GTAC 5 cut(s) 481, 590, 683, 1110, 1319
AfiI CCNNNNNNNGG 5 cut(s) 467, 760, 779, 1252, 1282
AflIII ACRYGT 4 cut(s) 1191, 1393, 1421, 1444
AjnI CCWGG 6 cut(s) 87, 188, 306, 676, 1197, 1312
AluBI AGCT 7 cut(s) 116, 256, 329, 547, 704, 1504, 1509
AluI AGCT 7 cut(s) 116, 256, 329, 547, 704, 1504, 1509
Alw21I GWGCWC 1 cut(s) 1506
AlwI GGATC 4 cut(s) 201, 253, 452, 465
AoxI GGCC 7 cut(s) 314, 770, 836, 1082, 1162, 1363, 1574
ApeKI GCWGC 1 cut(s) 92
ApoI RAATTY 3 cut(s) 581, 605, 1075
ArsI GACNNNNNNTTYG 2 cut(s) 203, 235
Asp718I GGTACC 1 cut(s) 1317
AspS9I GGNCC 6 cut(s) 279, 806, 837, 1163, 1364, 1409
AsuC2I CCSGG 2 cut(s) 769, 813
AsuHPI GGTGA 6 cut(s) 925, 1109, 1145, 1441, 1496, 1584
AvaII GGWCC 3 cut(s) 279, 806, 1409
BalI TGGCCA 2 cut(s) 1084, 1576
BamHI GGATCC 1 cut(s) 457
BanI GGYRCC 1 cut(s) 1317
BanII GRGCYC 1 cut(s) 1506
BbsI GAAGAC 2 cut(s) 60, 631
Bbv12I GWGCWC 1 cut(s) 1506
BbvI GCAGC 1 cut(s) 79
BceAI ACGGC 2 cut(s) 714, 934
BciT130I CCWGG 6 cut(s) 89, 190, 308, 678, 1199, 1314
BclI TGATCA 1 cut(s) 144
BcnI CCSGG 2 cut(s) 769, 813
BfaI CTAG 4 cut(s) 263, 519, 648, 1356
BglII AGATCT 1 cut(s) 785
BisI GCNGC 1 cut(s) 93
BlpI GCTNAGC 1 cut(s) 1505
BlsI GCNGC 1 cut(s) 94
Bme1390I CCNGG 8 cut(s) 89, 190, 308, 678, 769, 813, 1199, 1314
Bme18I GGWCC 3 cut(s) 279, 806, 1409
BmgT120I GGNCC 6 cut(s) 279, 806, 837, 1163, 1364, 1409
BmiI GGNNCC 5 cut(s) 203, 459, 1203, 1319, 1410
BmrFI CCNGG 8 cut(s) 89, 190, 308, 678, 769, 813, 1199, 1314
BmsI GCATC 5 cut(s) 505, 947, 1168, 1212, 1519
BpiI GAAGAC 2 cut(s) 60, 631
BplI GAGNNNNNCTC 4 cut(s) 39, 71, 1493, 1525
Bpu1102I GCTNAGC 1 cut(s) 1505
BpuEI CTTGAG 2 cut(s) 877, 1495
BpuMI CCSGG 2 cut(s) 769, 813
BsaHI GRCGYC 1 cut(s) 720
BsaJI CCNNGG 8 cut(s) 189, 275, 677, 778, 1281, 1312, 1313, 1360
BsaWI WCCGGW 1 cut(s) 585
Bsc4I CCNNNNNNNGG 5 cut(s) 467, 760, 779, 1252, 1282
Bse1I ACTGG 4 cut(s) 541, 734, 832, 1165
Bse3DI GCAATG 1 cut(s) 1263
BseBI CCWGG 6 cut(s) 89, 190, 308, 678, 1199, 1314
BseDI CCNNGG 8 cut(s) 189, 275, 677, 778, 1281, 1312, 1313, 1360
BseGI GGATG 3 cut(s) 128, 1059, 1277
BseLI CCNNNNNNNGG 5 cut(s) 467, 760, 779, 1252, 1282
BseMI GCAATG 1 cut(s) 1263
BseMII CTCAG 2 cut(s) 995, 1519
BseNI ACTGG 4 cut(s) 541, 734, 832, 1165
BseRI GAGGAG 2 cut(s) 488, 1532
BseXI GCAGC 1 cut(s) 79
BsgI GTGCAG 1 cut(s) 1125
BshFI GGCC 7 cut(s) 316, 772, 838, 1084, 1164, 1365, 1576
BshNI GGYRCC 1 cut(s) 1317
BsiHKAI GWGCWC 1 cut(s) 1506
BsiSI CCGG 3 cut(s) 586, 769, 812
BslFI GGGAC 1 cut(s) 368
BslI CCNNNNNNNGG 5 cut(s) 467, 760, 779, 1252, 1282
BsmFI GGGAC 1 cut(s) 368
BsnI GGCC 7 cut(s) 316, 772, 838, 1084, 1164, 1365, 1576
Bsp1286I GDGCHC 1 cut(s) 1506
Bsp143I GATC 7 cut(s) 99, 144, 193, 225, 258, 457, 785
Bsp1720I GCTNAGC 1 cut(s) 1505
Bsp19I CCATGG 2 cut(s) 275, 1281
BspACI CCGC 3 cut(s) 207, 936, 1563
BspANI GGCC 7 cut(s) 316, 772, 838, 1084, 1164, 1365, 1576
BspCNI CTCAG 2 cut(s) 994, 1518
BspHI TCATGA 1 cut(s) 349
BspLI GGNNCC 5 cut(s) 203, 459, 1203, 1319, 1410
BspPI GGATC 4 cut(s) 201, 253, 452, 465
BspT107I GGYRCC 1 cut(s) 1317
BsrDI GCAATG 1 cut(s) 1263
BsrI ACTGG 4 cut(s) 541, 734, 832, 1165
BssECI CCNNGG 8 cut(s) 189, 275, 677, 778, 1281, 1312, 1313, 1360
BssMI GATC 7 cut(s) 99, 144, 193, 225, 258, 457, 785
BssNI GRCGYC 1 cut(s) 720
BssT1I CCWWGG 3 cut(s) 275, 1281, 1360
Bst2UI CCWGG 6 cut(s) 89, 190, 308, 678, 1199, 1314
Bst4CI ACNGT 1 cut(s) 880
Bst6I CTCTTC 1 cut(s) 649
BstACI GRCGYC 1 cut(s) 720
BstC8I GCNNGC 2 cut(s) 774, 1574
BstDEI CTNAG 4 cut(s) 494, 981, 1030, 1505
BstDSI CCRYGG 3 cut(s) 275, 778, 1281
BstEII GGTNACC 1 cut(s) 1590
BstF5I GGATG 3 cut(s) 128, 1059, 1277
BstKTI GATC 7 cut(s) 102, 147, 196, 228, 261, 460, 788
BstMBI GATC 7 cut(s) 99, 144, 193, 225, 258, 457, 785
BstMWI GCNNNNNNNGC 7 cut(s) 113, 230, 710, 719, 858, 1529, 1569
BstNI CCWGG 6 cut(s) 89, 190, 308, 678, 1199, 1314
BstNSI RCATGY 2 cut(s) 1195, 1397
BstPI GGTNACC 1 cut(s) 1590
BstSCI CCNGG 8 cut(s) 87, 188, 306, 676, 767, 811, 1197, 1312
BstV1I GCAGC 1 cut(s) 79
BstV2I GAAGAC 2 cut(s) 60, 631
BstX2I RGATCY 3 cut(s) 193, 457, 785
BstYI RGATCY 3 cut(s) 193, 457, 785
BsuRI GGCC 7 cut(s) 316, 772, 838, 1084, 1164, 1365, 1576
BtgI CCRYGG 3 cut(s) 275, 778, 1281
BtsCI GGATG 3 cut(s) 128, 1059, 1277
BtsI GCAGTG 3 cut(s) 228, 898, 1007
BtsIMutI CAGTG 3 cut(s) 228, 898, 1007
Cac8I GCNNGC 2 cut(s) 774, 1574
CciI TCATGA 1 cut(s) 349
Cfr13I GGNCC 6 cut(s) 279, 806, 837, 1163, 1364, 1409
CseI GACGC 1 cut(s) 728
Csp6I GTAC 5 cut(s) 480, 589, 682, 1109, 1318
CviQI GTAC 5 cut(s) 480, 589, 682, 1109, 1318
DdeI CTNAG 4 cut(s) 494, 981, 1030, 1505
DpnI GATC 7 cut(s) 101, 146, 195, 227, 260, 459, 787
DpnII GATC 7 cut(s) 99, 144, 193, 225, 258, 457, 785
EaeI YGGCCR 2 cut(s) 1082, 1574
Eam1104I CTCTTC 1 cut(s) 649
EarI CTCTTC 1 cut(s) 649
Ecl136II GAGCTC 1 cut(s) 1504
Eco130I CCWWGG 3 cut(s) 275, 1281, 1360
Eco24I GRGCYC 1 cut(s) 1506
Eco47I GGWCC 3 cut(s) 279, 806, 1409
Eco53kI GAGCTC 1 cut(s) 1504
Eco57I CTGAAG 1 cut(s) 27
Eco91I GGTNACC 1 cut(s) 1590
EcoICRI GAGCTC 1 cut(s) 1504
EcoO65I GGTNACC 1 cut(s) 1590
EcoRI GAATTC 1 cut(s) 581
EcoRII CCWGG 6 cut(s) 87, 188, 306, 676, 1197, 1312
EcoT14I CCWWGG 3 cut(s) 275, 1281, 1360
EcoT22I ATGCAT 1 cut(s) 1273
EcoT38I GRGCYC 1 cut(s) 1506
ErhI CCWWGG 3 cut(s) 275, 1281, 1360
FalI AAGNNNNNCTT 2 cut(s) 826, 858
FaqI GGGAC 1 cut(s) 368
FauI CCCGC 1 cut(s) 214
FbaI TGATCA 1 cut(s) 144
Fnu4HI GCNGC 1 cut(s) 93
FokI GGATG 3 cut(s) 115, 1046, 1264
FriOI GRGCYC 1 cut(s) 1506
Fsp4HI GCNGC 1 cut(s) 93
FspBI CTAG 4 cut(s) 263, 519, 648, 1356
GluI GCNGC 1 cut(s) 93
HaeIII GGCC 7 cut(s) 316, 772, 838, 1084, 1164, 1365, 1576
HapII CCGG 3 cut(s) 586, 769, 812
HgaI GACGC 1 cut(s) 728
Hin1I GRCGYC 1 cut(s) 720
HindIII AAGCTT 1 cut(s) 545
HinfI GANTC 6 cut(s) 641, 651, 764, 868, 927, 1045
HpaII CCGG 3 cut(s) 586, 769, 812
HphI GGTGA 6 cut(s) 925, 1109, 1145, 1441, 1496, 1584
Hpy166II GTNNAC 4 cut(s) 640, 674, 809, 1399
Hpy188I TCNGA 5 cut(s) 763, 984, 1221, 1377, 1528
Hpy188III TCNNGA 5 cut(s) 350, 648, 671, 920, 1428
Hpy8I GTNNAC 4 cut(s) 640, 674, 809, 1399
HpyAV CCTTC 7 cut(s) 308, 461, 499, 734, 1003, 1008, 1565
HpyCH4III ACNGT 1 cut(s) 880
HpyCH4IV ACGT 2 cut(s) 1423, 1444
HpyCH4V TGCA 8 cut(s) 107, 852, 891, 1012, 1105, 1142, 1261, 1271
HpyF10VI GCNNNNNNNGC 7 cut(s) 113, 230, 710, 719, 858, 1529, 1569
HpyF3I CTNAG 4 cut(s) 494, 981, 1030, 1505
HpySE526I ACGT 2 cut(s) 1423, 1444
Hsp92I GRCGYC 1 cut(s) 720
KpnI GGTACC 1 cut(s) 1321
Ksp22I TGATCA 1 cut(s) 144
Kzo9I GATC 7 cut(s) 99, 144, 193, 225, 258, 457, 785
LmnI GCTCC 3 cut(s) 121, 701, 979
Lsp1109I GCAGC 1 cut(s) 79
LweI GCATC 5 cut(s) 505, 947, 1168, 1212, 1519
MaeI CTAG 4 cut(s) 263, 519, 648, 1356
MaeII ACGT 2 cut(s) 1423, 1444
MaeIII GTNAC 4 cut(s) 869, 1005, 1447, 1590
MalI GATC 7 cut(s) 101, 146, 195, 227, 260, 459, 787
MboI GATC 7 cut(s) 99, 144, 193, 225, 258, 457, 785
MboII GAAGA 9 cut(s) 20, 60, 347, 636, 636, 698, 701, 704, 1344
MfeI CAATTG 2 cut(s) 60, 135
MflI RGATCY 3 cut(s) 193, 457, 785
MhlI GDGCHC 1 cut(s) 1506
MlsI TGGCCA 2 cut(s) 1084, 1576
MluCI AATT 9 cut(s) 60, 135, 510, 581, 605, 1075, 1087, 1368, 1468
MluNI TGGCCA 2 cut(s) 1084, 1576
MlyI GAGTC 3 cut(s) 635, 877, 936
MmeI TCCRAC 3 cut(s) 96, 1323, 1522
Mox20I TGGCCA 2 cut(s) 1084, 1576
Mph1103I ATGCAT 1 cut(s) 1273
MscI TGGCCA 2 cut(s) 1084, 1576
MseI TTAA 2 cut(s) 1173, 1215
MslI CAYNNNNRTG 3 cut(s) 449, 1190, 1256
Msp20I TGGCCA 2 cut(s) 1084, 1576
MspA1I CMGCKG 1 cut(s) 209
MspI CCGG 3 cut(s) 586, 769, 812
MspR9I CCNGG 8 cut(s) 89, 190, 308, 678, 769, 813, 1199, 1314
MunI CAATTG 2 cut(s) 60, 135
MvaI CCWGG 6 cut(s) 89, 190, 308, 678, 1199, 1314
MwoI GCNNNNNNNGC 7 cut(s) 113, 230, 710, 719, 858, 1529, 1569
NciI CCSGG 2 cut(s) 769, 813
NcoI CCATGG 2 cut(s) 275, 1281
NdeII GATC 7 cut(s) 99, 144, 193, 225, 258, 457, 785
NlaIV GGNNCC 5 cut(s) 203, 459, 1203, 1319, 1410
NmuCI GTSAC 4 cut(s) 869, 1005, 1447, 1590
NsiI ATGCAT 1 cut(s) 1273
NspI RCATGY 2 cut(s) 1195, 1397
PagI TCATGA 1 cut(s) 349
PasI CCCWGGG 1 cut(s) 1313
PciI ACATGT 2 cut(s) 1191, 1393
PfeI GAWTC 3 cut(s) 651, 764, 1045
PflFI GACNNNGTC 2 cut(s) 630, 926
PflMI CCANNNNNTGG 1 cut(s) 1252
PkrI GCNGC 1 cut(s) 94
PleI GAGTC 3 cut(s) 635, 876, 935
PpsI GAGTC 3 cut(s) 635, 876, 935
PscI ACATGT 2 cut(s) 1191, 1393
Psp124BI GAGCTC 1 cut(s) 1506
Psp6I CCWGG 6 cut(s) 87, 188, 306, 676, 1197, 1312
PspEI GGTNACC 1 cut(s) 1590
PspGI CCWGG 6 cut(s) 87, 188, 306, 676, 1197, 1312
PspN4I GGNNCC 5 cut(s) 203, 459, 1203, 1319, 1410
PspPI GGNCC 6 cut(s) 279, 806, 837, 1163, 1364, 1409
PsuI RGATCY 3 cut(s) 193, 457, 785
PsyI GACNNNGTC 2 cut(s) 630, 926
RsaI GTAC 5 cut(s) 481, 590, 683, 1110, 1319
RsaNI GTAC 5 cut(s) 480, 589, 682, 1109, 1318
RseI CAYNNNNRTG 3 cut(s) 449, 1190, 1256
SacI GAGCTC 1 cut(s) 1506
SaqAI TTAA 2 cut(s) 1173, 1215
SatI GCNGC 1 cut(s) 93
Sau3AI GATC 7 cut(s) 99, 144, 193, 225, 258, 457, 785
Sau96I GGNCC 6 cut(s) 279, 806, 837, 1163, 1364, 1409
SchI GAGTC 3 cut(s) 635, 877, 936
ScrFI CCNGG 8 cut(s) 89, 190, 308, 678, 769, 813, 1199, 1314
SduI GDGCHC 1 cut(s) 1506
SfaNI GCATC 5 cut(s) 505, 947, 1168, 1212, 1519
SinI GGWCC 3 cut(s) 279, 806, 1409
SmiMI CAYNNNNRTG 3 cut(s) 449, 1190, 1256
SmlI CTYRAG 2 cut(s) 856, 1510
SmoI CTYRAG 2 cut(s) 856, 1510
Sse9I AATT 9 cut(s) 60, 135, 510, 581, 605, 1075, 1087, 1368, 1468
SsiI CCGC 3 cut(s) 207, 936, 1563
SspMI CTAG 4 cut(s) 263, 519, 648, 1356
SstI GAGCTC 1 cut(s) 1506
StyD4I CCNGG 8 cut(s) 87, 188, 306, 676, 767, 811, 1197, 1312
StyI CCWWGG 3 cut(s) 275, 1281, 1360
TaaI ACNGT 1 cut(s) 880
TaiI ACGT 2 cut(s) 1426, 1447
TasI AATT 9 cut(s) 60, 135, 510, 581, 605, 1075, 1087, 1368, 1468
TfiI GAWTC 3 cut(s) 651, 764, 1045
Tru1I TTAA 2 cut(s) 1173, 1215
Tru9I TTAA 2 cut(s) 1173, 1215
TscAI CASTG 3 cut(s) 235, 898, 1014
TseFI GTSAC 4 cut(s) 869, 1005, 1447, 1590
TseI GCWGC 1 cut(s) 92
Tsp45I GTSAC 4 cut(s) 869, 1005, 1447, 1590
TspDTI ATGAA 5 cut(s) 255, 290, 366, 433, 697
TspRI CASTG 3 cut(s) 235, 898, 1014
Tth111I GACNNNGTC 2 cut(s) 630, 926
Van91I CCANNNNNTGG 1 cut(s) 1252
VpaK11BI GGWCC 3 cut(s) 279, 806, 1409
XapI RAATTY 3 cut(s) 581, 605, 1075
XbaI TCTAGA 1 cut(s) 647
XceI RCATGY 2 cut(s) 1195, 1397
XspI CTAG 4 cut(s) 263, 519, 648, 1356
Zsp2I ATGCAT 1 cut(s) 1273
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.