Rw4G021230

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr4
OG0000073
Physical Location & Seq
Reverse (-)
45883960 .. 45885655
1696 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw4G021230.1

Sequence Viewer

Length: 1260 bp
ATGGCTTCATCTTCCCACACTCATGATGAGGTCCCTTTTGTGGACGAGGGTATCATTGAAGCTATGTCAGTAAACTTTGAATCAAGTGCTGACTTCCTGGATCTGGAATGTGGTATTAACCTGCTGGGCATCTTAATTGCTGATGAAGAACCTGGCCTTGGAGGGGTGAAAGCCACCCTTATGGGAATCTGGAAATCAATTGGTCAGATCCGTATCATTCGGGTTAAAATGAACACATACTGTCTCACTGTTGGATCTGAGAAGTTGGCTAAAAAGCTCCTGGAGGACAGCCCTTGGTGTGTTAAAGGGTTTTGCTTTTCGATTCGTCAGTGGCCTCGTTACCAGTCCATTGATGATATTGAAACCCATCGTGTAACTTTTTGGATCCAAGCTCATGGGGTTCCACTGGATCAACTCTCAGTTGGCAACGGAAGGAAGTTAGGCAACCTGCTCGGCTCAGTTTTGGAAGTGGAGGACCCATTAATTGTAGGCAACAGGGGGTTCCTGCGTATGAGGATTGATTTTGATGCTCGAAAGCCTCTAGCAACTTTTGTCAACCTTCCAAAGCAACACCTACCACCTTCCAGAATCAGATTGCAATATGAAAATCTGAGAAATTTCTGCTTCAATTGTGGACGGCTTGGACACATGGTGACTTCCTGCAAGCATACAAAGCACCCATTGGAGAGGACAACTACTGACAGTGACGGGTCCAGAGCAACTATCTGCCCAACCCTCTGCCCATTATTTGATTGCGACCACTCTACTGACAATTCACATGGCAATACAACATCCCATGTGACATCCATCAGGATTCAGAGACCTAGAATCACAAAGGATTTGTTACGTCAGAGTCCTAGCATGTGGGATCCTGATGCCCATGGGTCCCTTTTCAGAAATGGAAGTGTTACTAGGGCTTTTAACGGGCTCTGCTTGAGGGATGGTATATGGGCTGATCCTGAATGCATCCCCCCTTGGGCTTTCCCTACAAAAGAAGCCTATTACAATGACAATCCTCACTTTCCAGTTCCCTTGAGTATTGACTCCTTGGATGGGCCTACAACTGAGATGTCCAATTCAGTTAAGTTGGTGGAAATACCACTAGACCAAGTGGGGACACAGCTTATCTCTCCACCTGAAGAACAGTCTGTCCAGGTGACAAAGAAGAGACAAAGGAGGAAATCAATTGCTGATCACGCCCCAAAAAAGGTCGAGGTAGAGGTCGGGGTAGAGGGGGAGTTGGAAGGGGGAAAGCATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 RVT_3 zf-CCHC_4

Protein Analysis

419

Amino Acids

46.81

Weight (kDa)

6.32

Isoelectric Point (pI)

38.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4283 PF14111 46 - 112 6.2e-06 Domain of unknown function (DUF4283)
zf-CCHC_4 PF14392 175 - 222 1.7e-10 Zinc knuckle
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000073)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17821 FvH4_2g04610 FvH4_2g09611 FvH4_2g13563 FvH4_3g21493 FvH4_3g32115 FvH4_3g35060 FvH4_4g00220 FvH4_4g06410 FvH4_4g10367 FvH4_4g10367 FvH4_4g10367 FvH4_5g06101 FvH4_5g08842 FvH4_5g27366 FvH4_5g31283 FvH4_6g11611 FvH4_6g23032 FvH4_7g05661 FvH4_7g06172
malus_domestica MD13G1263700.v1.1
prunus_persica Prupe.1G292300_v2.0.a1 Prupe.5G009700_v2.0.a1 Prupe.6G158100_v2.0.a1 Prupe.8G025100_v2.0.a1 Prupe.8G042600_v2.0.a1
pyrus_communis pycom02g02250 pycom02g16030 pycom05g10490 pycom09g06450 pycom09g06460 pycom13g26200 pycom16g17700
rosa_chinensis RchiOBHm_Chr2g0163321 RchiOBHm_Chr4g0401981 RchiOBHm_Chr5g0005991 RchiOBHm_Chr5g0027191 RchiOBHm_Chr6g0249771
rosa_laevigata RLG00000001040 RLG00000001764 RLG00000002239 RLG00000002240 RLG00000003259 RLG00000008993 RLG00000013847 RLG00000014178 RLG00000015576 RLG00000017269 RLG00000017355 RLG00000018127 RLG00000018602 RLG00000018615 RLG00000019904 RLG00000020044 RLG00000021849 RLG00000021850 RLG00000027965 RLG00000029266 RLG00000029820 RLG00000031112 RLG00000031915 RLG00000033568 RLG00000035013 RLG00000035677 RLG00000036568 RLG00000036628
rosa_multiflora Rmu_co8254085.1_g000001 Rmu_co8462383.1_g000001 Rmu_sc0000185.1_g000049 Rmu_sc0000251.1_g000018 Rmu_sc0000367.1_g000094 Rmu_sc0000498.1_g000023 Rmu_sc0000868.1_g000005 Rmu_sc0001521.1_g000047 Rmu_sc0001534.1_g000007 Rmu_sc0002014.1_g000012 Rmu_sc0003214.1_g000009 Rmu_sc0003573.1_g000041 Rmu_sc0003832.1_g000023 Rmu_sc0004677.1_g000015 Rmu_sc0004967.1_g000014 Rmu_sc0005426.1_g000001 Rmu_sc0005621.1_g000004 Rmu_sc0005640.1_g000009 Rmu_sc0005947.1_g000034 Rmu_sc0006889.1_g000011 Rmu_sc0007121.1_g000014 Rmu_sc0009191.1_g000017 Rmu_sc0010556.1_g000011 Rmu_sc0011396.1_g000007 Rmu_sc0019862.1_g000002 Rmu_sc0022931.1_g000003 Rmu_sc0024164.1_g000001 Rmu_ssc0000391.1_g000027
rosa_roxburghii Rroxscaffold_1G00050060 Rroxscaffold_1G00061810 Rroxscaffold_2G00109590 Rroxscaffold_2G00113810 Rroxscaffold_2G00124040 Rroxscaffold_2G00143620 Rroxscaffold_2G00154760 Rroxscaffold_4G00302820 Rroxscaffold_4G00302830 Rroxscaffold_4G00308680 Rroxscaffold_4G00310240 Rroxscaffold_4G00327890 Rroxscaffold_5G00334600 Rroxscaffold_5G00336050 Rroxscaffold_5G00346560 Rroxscaffold_5G00347860 Rroxscaffold_5G00347870 Rroxscaffold_5G00349330 Rroxscaffold_5G00351980 Rroxscaffold_6G00395280 Rroxscaffold_6G00396750 Rroxscaffold_6G00402910 Rroxscaffold_7G00174790 Rroxscaffold_7G00177570 Rroxscaffold_7G00191820 Rroxscaffold_7G00203480 Rroxscaffold_7G00204380
rosa_rugosa Rorug01G0106600 Rorug01G0106600 Rorug01G0148500.1 Rorug02G0224200 Rorug02G0225500 Rorug02G0233000 Rorug02G0630400 Rorug03G0198000 Rorug03G0232600.1 Rorug03G0240500 Rorug04G0032900 Rorug04G0073300 Rorug04G0118500 Rorug04G0149600.1 Rorug04G0205100 Rorug04G0256700 Rorug05G0020200 Rorug05G0050000 Rorug05G0247300 Rorug05G0295100 Rorug05G0337900 Rorug05G0542600 Rorug06G0034800 Rorug06G0035100 Rorug06G0220100 Rorug07G0091900 Rorug07G0271200
rosa_samantha Rh1AG118200 Rh1AG253000 Rh1AG296300 Rh1AG409000 Rh1AG410600 Rh1BG073400 Rh1BG130400 Rh1BG147300 Rh1BG163600 Rh1CG016000 Rh1DG012200 Rh1DG012300 Rh1DG078600 Rh1DG078800 Rh1DG138100 Rh1DG179200 Rh1DG192600 Rh1DG194500 Rh1DG194600 Rh1DG214300 Rh1DG245900 Rh1DG267000 Rh1DG322700 Rh1DG442700 Rh2AG282000 Rh2AG423000 Rh2AG423100 Rh2AG460700 Rh2AG466200 Rh2AG513400 Rh2AG547000 Rh2BG277800 Rh2BG281200 Rh2BG298300 Rh2BG304300 Rh2BG433500 Rh2CG276000 Rh2CG282600 Rh2CG325500 Rh2CG393000 Rh2DG319200 Rh2DG443400 Rh3AG169300 Rh3AG303600 Rh3BG195000 Rh3BG282600 Rh3BG343400 Rh3BG343500 Rh3BG344100 Rh3CG111700 Rh3CG185700 Rh3CG259100 Rh3CG293000 Rh3CG317900 Rh3CG340900 Rh3CG341000 Rh3CG341100 Rh3CG354700 Rh3CG359200 Rh3CG368100 Rh3DG179900 Rh3DG288700 Rh3DG302600 Rh3DG316000 Rh3DG324500 Rh3DG324600 Rh3DG343200 Rh3DG343300 Rh3DG362400 Rh4AG071800 Rh4BG034000 Rh4BG044300 Rh4BG044400 Rh4BG069600 Rh4BG157400 Rh4CG007000 Rh4CG030400 Rh4CG037900 Rh4CG077700 Rh4CG115000 Rh4CG162400 Rh4CG162500 Rh4CG165500 Rh4CG165600 Rh4CG172900 Rh4CG239700 Rh4DG055900 Rh4DG173200 Rh5AG354900 Rh5AG511100 Rh5BG112600 Rh5BG541000 Rh5BG541100 Rh5BG549300 Rh5CG004400 Rh5CG315000 Rh5CG563800 Rh5CG572100 Rh5DG112200 Rh5DG191300 Rh5DG407600 Rh5DG407700 Rh5DG567500 Rh6AG002600 Rh6AG051400 Rh6AG199800 Rh6AG199900 Rh6AG206200 Rh6AG391000 Rh6AG391100 Rh6BG007500 Rh6BG053400 Rh6BG225900 Rh6BG227100 Rh6BG232400 Rh6CG091100 Rh6CG125400 Rh6CG186700 Rh6CG222700 Rh6CG222800 Rh6CG235500 Rh6CG247200 Rh6CG331200 Rh6CG465100 Rh6DG183500 Rh6DG213500 Rh6DG238800 Rh6DG263700 Rh7AG211800 Rh7AG441800 Rh7BG008600 Rh7BG253000 Rh7BG390000 Rh7CG189600 Rh7CG401500 Rh7CG424200 Rh7CG428700 Rh7CG479800 Rh7CG494300 Rh7DG177000 Rh7DG218700 Rh7DG254000 Rh7DG294800 Rh7DG407200 Rh7DG448800 Rh7DG461500
rosa_wichuraiana Rw0G012180 Rw1G005270 Rw1G012310 Rw1G016890 Rw1G021700 Rw2G014380 Rw2G027690 Rw3G016400 Rw3G028230 Rw3G029320 Rw4G002060 Rw4G002100 Rw4G003980 Rw4G014140 Rw4G014770 Rw4G014780 Rw4G015760 Rw4G021230 Rw5G000520 Rw5G035610 Rw6G001680 Rw6G017890 Rw6G027440 Rw6G034130 Rw6G034170 Rw7G012430 Rw7G033870

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 129, 456
AclWI GGATC 9 cut(s) 108, 202, 262, 379, 392, 417, 863, 876, 950
AcsI RAATTY 1 cut(s) 616
AcuI CTGAAG 1 cut(s) 1158
AdeI CACNNNGTG 1 cut(s) 652
AfiI CCNNNNNNNGG 7 cut(s) 40, 103, 158, 163, 976, 1053, 1207
AgsI TTSAA 4 cut(s) 59, 80, 362, 628
AjnI CCWGG 4 cut(s) 96, 151, 279, 1152
AjuI GAANNNNNNNTTGG 2 cut(s) 141, 173
AloI GAACNNNNNNTCC 2 cut(s) 1134, 1166
AluBI AGCT 4 cut(s) 62, 277, 392, 1123
AluI AGCT 4 cut(s) 62, 277, 392, 1123
Alw26I GTCTC 3 cut(s) 248, 814, 1162
AlwI GGATC 9 cut(s) 108, 202, 262, 379, 392, 417, 863, 876, 950
AoxI GGCC 3 cut(s) 154, 332, 1055
ApoI RAATTY 1 cut(s) 616
AseI ATTAAT 1 cut(s) 482
AspS9I GGNCC 5 cut(s) 31, 475, 711, 885, 1055
AsuHPI GGTGA 3 cut(s) 178, 664, 1168
AvaII GGWCC 4 cut(s) 31, 475, 711, 885
BaeI ACNNNNGTAYC 2 cut(s) 34, 67
BamHI GGATCC 2 cut(s) 384, 868
BanII GRGCYC 1 cut(s) 930
BccI CCATC 4 cut(s) 375, 815, 935, 1046
BceAI ACGGC 1 cut(s) 653
BcgI CGANNNNNNTGC 2 cut(s) 433, 467
BciT130I CCWGG 4 cut(s) 98, 153, 281, 1154
BclI TGATCA 1 cut(s) 1192
BcoDI GTCTC 3 cut(s) 248, 814, 1162
BfaI CTAG 5 cut(s) 542, 825, 858, 912, 1103
BfuAI ACCTGC 2 cut(s) 129, 456
Bme1390I CCNGG 4 cut(s) 98, 153, 281, 1154
Bme18I GGWCC 4 cut(s) 31, 475, 711, 885
BmgT120I GGNCC 5 cut(s) 31, 475, 711, 885, 1055
BmiI GGNNCC 9 cut(s) 33, 386, 402, 477, 503, 712, 870, 886, 887
BmrFI CCNGG 4 cut(s) 98, 153, 281, 1154
BmsI GCATC 4 cut(s) 138, 517, 865, 975
BpmI CTGGAG 1 cut(s) 302
BpuEI CTTGAG 2 cut(s) 955, 1054
BsaBI GATNNNNATC 1 cut(s) 212
BsaI GGTCTC 1 cut(s) 814
BsaJI CCNNGG 5 cut(s) 157, 293, 880, 974, 1047
Bsc4I CCNNNNNNNGG 7 cut(s) 40, 103, 158, 163, 976, 1053, 1207
Bse1I ACTGG 3 cut(s) 343, 411, 1025
Bse8I GATNNNNATC 1 cut(s) 212
BseBI CCWGG 4 cut(s) 98, 153, 281, 1154
BseDI CCNNGG 5 cut(s) 157, 293, 880, 974, 1047
BseGI GGATG 5 cut(s) 791, 803, 946, 966, 1057
BseJI GATNNNNATC 1 cut(s) 212
BseLI CCNNNNNNNGG 7 cut(s) 40, 103, 158, 163, 976, 1053, 1207
BseMII CTCAG 5 cut(s) 249, 432, 471, 602, 1056
BseNI ACTGG 3 cut(s) 343, 411, 1025
BseYI CCCAGC 1 cut(s) 124
BshFI GGCC 3 cut(s) 156, 334, 1057
BslFI GGGAC 3 cut(s) 17, 871, 1129
BslI CCNNNNNNNGG 7 cut(s) 40, 103, 158, 163, 976, 1053, 1207
BsmAI GTCTC 3 cut(s) 248, 814, 1162
BsmFI GGGAC 3 cut(s) 17, 871, 1129
BsmI GAATGC 1 cut(s) 968
BsnI GGCC 3 cut(s) 156, 334, 1057
Bso31I GGTCTC 1 cut(s) 814
Bsp1286I GDGCHC 1 cut(s) 930
Bsp143I GATC 8 cut(s) 100, 207, 254, 384, 409, 868, 955, 1192
Bsp19I CCATGG 1 cut(s) 880
BspANI GGCC 3 cut(s) 156, 334, 1057
BspCNI CTCAG 5 cut(s) 250, 431, 470, 603, 1057
BspHI TCATGA 1 cut(s) 22
BspLI GGNNCC 9 cut(s) 33, 386, 402, 477, 503, 712, 870, 886, 887
BspMI ACCTGC 2 cut(s) 129, 456
BspPI GGATC 9 cut(s) 108, 202, 262, 379, 392, 417, 863, 876, 950
BspTNI GGTCTC 1 cut(s) 814
BsrI ACTGG 3 cut(s) 343, 411, 1025
BssECI CCNNGG 5 cut(s) 157, 293, 880, 974, 1047
BssMI GATC 8 cut(s) 100, 207, 254, 384, 409, 868, 955, 1192
BssT1I CCWWGG 5 cut(s) 157, 293, 880, 974, 1047
Bst2UI CCWGG 4 cut(s) 98, 153, 281, 1154
Bst4CI ACNGT 4 cut(s) 242, 250, 704, 1146
Bst6I CTCTTC 1 cut(s) 1160
BstC8I GCNNGC 1 cut(s) 665
BstDEI CTNAG 5 cut(s) 258, 418, 457, 611, 1065
BstDSI CCRYGG 1 cut(s) 880
BstF5I GGATG 5 cut(s) 791, 803, 946, 966, 1057
BstKTI GATC 8 cut(s) 103, 210, 257, 387, 412, 871, 958, 1195
BstMAI GTCTC 3 cut(s) 248, 814, 1162
BstMBI GATC 8 cut(s) 100, 207, 254, 384, 409, 868, 955, 1192
BstMWI GCNNNNNNNGC 2 cut(s) 673, 1196
BstNI CCWGG 4 cut(s) 98, 153, 281, 1154
BstNSI RCATGY 1 cut(s) 865
BstSCI CCNGG 4 cut(s) 96, 151, 279, 1152
BstX2I RGATCY 5 cut(s) 100, 207, 254, 384, 868
BstXI CCANNNNNNTGG 2 cut(s) 181, 395
BstYI RGATCY 5 cut(s) 100, 207, 254, 384, 868
BsuRI GGCC 3 cut(s) 156, 334, 1057
BtgI CCRYGG 1 cut(s) 880
BtsCI GGATG 5 cut(s) 791, 803, 946, 966, 1057
BtsIMutI CAGTG 4 cut(s) 246, 335, 404, 709
BveI ACCTGC 2 cut(s) 129, 456
Cac8I GCNNGC 1 cut(s) 665
CciI TCATGA 1 cut(s) 22
Cfr13I GGNCC 5 cut(s) 31, 475, 711, 885, 1055
CviAII CATG 7 cut(s) 23, 395, 649, 779, 797, 862, 881
DdeI CTNAG 5 cut(s) 258, 418, 457, 611, 1065
DpnI GATC 8 cut(s) 102, 209, 256, 386, 411, 870, 957, 1194
DpnII GATC 8 cut(s) 100, 207, 254, 384, 409, 868, 955, 1192
DraIII CACNNNGTG 1 cut(s) 652
Eam1104I CTCTTC 1 cut(s) 1160
EarI CTCTTC 1 cut(s) 1160
Eco130I CCWWGG 5 cut(s) 157, 293, 880, 974, 1047
Eco24I GRGCYC 1 cut(s) 930
Eco31I GGTCTC 1 cut(s) 814
Eco47I GGWCC 4 cut(s) 31, 475, 711, 885
Eco57I CTGAAG 1 cut(s) 1158
EcoO109I RGGNCCY 3 cut(s) 31, 475, 885
EcoRII CCWGG 4 cut(s) 96, 151, 279, 1152
EcoT14I CCWWGG 5 cut(s) 157, 293, 880, 974, 1047
EcoT22I ATGCAT 1 cut(s) 968
EcoT38I GRGCYC 1 cut(s) 930
ErhI CCWWGG 5 cut(s) 157, 293, 880, 974, 1047
FaeI CATG 7 cut(s) 26, 398, 652, 782, 800, 865, 884
FalI AAGNNNNNCTT 2 cut(s) 162, 194
FaqI GGGAC 3 cut(s) 17, 871, 1129
FatI CATG 7 cut(s) 22, 394, 648, 778, 796, 861, 880
FbaI TGATCA 1 cut(s) 1192
FokI GGATG 5 cut(s) 778, 790, 953, 953, 1064
FriOI GRGCYC 1 cut(s) 930
FspBI CTAG 5 cut(s) 542, 825, 858, 912, 1103
GsaI CCCAGC 1 cut(s) 128
GsuI CTGGAG 1 cut(s) 302
HaeIII GGCC 3 cut(s) 156, 334, 1057
Hin1II CATG 7 cut(s) 26, 398, 652, 782, 800, 865, 884
HincII GTYRAC 1 cut(s) 556
HindII GTYRAC 1 cut(s) 556
HinfI GANTC 8 cut(s) 80, 186, 322, 588, 814, 828, 853, 1043
HphI GGTGA 3 cut(s) 178, 664, 1168
Hpy166II GTNNAC 4 cut(s) 43, 73, 556, 635
Hpy188I TCNGA 7 cut(s) 207, 259, 593, 612, 819, 852, 896
Hpy188III TCNNGA 8 cut(s) 23, 104, 190, 585, 714, 811, 872, 959
Hpy8I GTNNAC 4 cut(s) 43, 73, 556, 635
HpyAV CCTTC 4 cut(s) 426, 569, 591, 1238
HpyCH4III ACNGT 4 cut(s) 242, 250, 704, 1146
HpyCH4IV ACGT 1 cut(s) 847
HpyCH4V TGCA 3 cut(s) 598, 663, 966
HpyF10VI GCNNNNNNNGC 2 cut(s) 673, 1196
HpyF3I CTNAG 5 cut(s) 258, 418, 457, 611, 1065
HpySE526I ACGT 1 cut(s) 847
Hsp92II CATG 7 cut(s) 26, 398, 652, 782, 800, 865, 884
KflI GGGWCCC 1 cut(s) 885
Ksp22I TGATCA 1 cut(s) 1192
Kzo9I GATC 8 cut(s) 100, 207, 254, 384, 409, 868, 955, 1192
LmnI GCTCC 1 cut(s) 282
LweI GCATC 4 cut(s) 138, 517, 865, 975
MaeI CTAG 5 cut(s) 542, 825, 858, 912, 1103
MaeII ACGT 1 cut(s) 847
MaeIII GTNAC 8 cut(s) 338, 373, 652, 704, 799, 843, 907, 1156
MalI GATC 8 cut(s) 102, 209, 256, 386, 411, 870, 957, 1194
MboI GATC 8 cut(s) 100, 207, 254, 384, 409, 868, 955, 1192
MboII GAAGA 4 cut(s) 3, 158, 1151, 1177
MfeI CAATTG 3 cut(s) 198, 628, 1185
MflI RGATCY 5 cut(s) 100, 207, 254, 384, 868
MhlI GDGCHC 1 cut(s) 930
MluCI AATT 8 cut(s) 135, 198, 483, 616, 628, 772, 1075, 1185
MlyI GAGTC 2 cut(s) 862, 1037
MmeI TCCRAC 2 cut(s) 232, 1221
Mph1103I ATGCAT 1 cut(s) 968
MseI TTAA 7 cut(s) 117, 134, 225, 303, 482, 921, 1083
MslI CAYNNNNRTG 2 cut(s) 21, 179
MspR9I CCNGG 4 cut(s) 98, 153, 281, 1154
MunI CAATTG 3 cut(s) 198, 628, 1185
Mva1269I GAATGC 1 cut(s) 968
MvaI CCWGG 4 cut(s) 98, 153, 281, 1154
MwoI GCNNNNNNNGC 2 cut(s) 673, 1196
NcoI CCATGG 1 cut(s) 880
NdeII GATC 8 cut(s) 100, 207, 254, 384, 409, 868, 955, 1192
NlaIII CATG 7 cut(s) 26, 398, 652, 782, 800, 865, 884
NlaIV GGNNCC 9 cut(s) 33, 386, 402, 477, 503, 712, 870, 886, 887
NmeAIII GCCGAG 1 cut(s) 432
NmuCI GTSAC 4 cut(s) 652, 704, 799, 1156
NsiI ATGCAT 1 cut(s) 968
NspI RCATGY 1 cut(s) 865
PagI TCATGA 1 cut(s) 22
PctI GAATGC 1 cut(s) 968
PfeI GAWTC 6 cut(s) 80, 186, 322, 588, 814, 828
PfoI TCCNGGA 2 cut(s) 96, 279
PleI GAGTC 2 cut(s) 861, 1037
PpsI GAGTC 2 cut(s) 861, 1037
PpuMI RGGWCCY 3 cut(s) 31, 475, 885
PshBI ATTAAT 1 cut(s) 482
Psp5II RGGWCCY 3 cut(s) 31, 475, 885
Psp6I CCWGG 4 cut(s) 96, 151, 279, 1152
PspFI CCCAGC 1 cut(s) 124
PspGI CCWGG 4 cut(s) 96, 151, 279, 1152
PspN4I GGNNCC 9 cut(s) 33, 386, 402, 477, 503, 712, 870, 886, 887
PspPI GGNCC 5 cut(s) 31, 475, 711, 885, 1055
PspPPI RGGWCCY 3 cut(s) 31, 475, 885
PsuI RGATCY 5 cut(s) 100, 207, 254, 384, 868
RseI CAYNNNNRTG 2 cut(s) 21, 179
SaqAI TTAA 7 cut(s) 117, 134, 225, 303, 482, 921, 1083
Sau3AI GATC 8 cut(s) 100, 207, 254, 384, 409, 868, 955, 1192
Sau96I GGNCC 5 cut(s) 31, 475, 711, 885, 1055
SchI GAGTC 2 cut(s) 862, 1037
ScrFI CCNGG 4 cut(s) 98, 153, 281, 1154
SduI GDGCHC 1 cut(s) 930
SfaNI GCATC 4 cut(s) 138, 517, 865, 975
SinI GGWCC 4 cut(s) 31, 475, 711, 885
SmiMI CAYNNNNRTG 2 cut(s) 21, 179
SmlI CTYRAG 2 cut(s) 934, 1033
SmoI CTYRAG 2 cut(s) 934, 1033
Sse9I AATT 8 cut(s) 135, 198, 483, 616, 628, 772, 1075, 1185
SspMI CTAG 5 cut(s) 542, 825, 858, 912, 1103
StyD4I CCNGG 4 cut(s) 96, 151, 279, 1152
StyI CCWWGG 5 cut(s) 157, 293, 880, 974, 1047
TaaI ACNGT 4 cut(s) 242, 250, 704, 1146
TaiI ACGT 1 cut(s) 850
TaqI TCGA 3 cut(s) 320, 532, 1212
TasI AATT 8 cut(s) 135, 198, 483, 616, 628, 772, 1075, 1185
TfiI GAWTC 6 cut(s) 80, 186, 322, 588, 814, 828
Tru1I TTAA 7 cut(s) 117, 134, 225, 303, 482, 921, 1083
Tru9I TTAA 7 cut(s) 117, 134, 225, 303, 482, 921, 1083
TscAI CASTG 4 cut(s) 253, 335, 411, 709
TseFI GTSAC 4 cut(s) 652, 704, 799, 1156
Tsp45I GTSAC 4 cut(s) 652, 704, 799, 1156
TspDTI ATGAA 3 cut(s) 159, 245, 618
TspGWI ACGGA 2 cut(s) 200, 444
TspRI CASTG 4 cut(s) 253, 335, 411, 709
VpaK11BI GGWCC 4 cut(s) 31, 475, 711, 885
VspI ATTAAT 1 cut(s) 482
XapI RAATTY 1 cut(s) 616
XceI RCATGY 1 cut(s) 865
XspI CTAG 5 cut(s) 542, 825, 858, 912, 1103
Zsp2I ATGCAT 1 cut(s) 968
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.