Rw6G034130

Domain of unknown function (DUF4283)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
OG0000073
Physical Location & Seq
Reverse (-)
58682694 .. 58683671
978 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G034130.1

Sequence Viewer

Length: 918 bp
ATGACTCTTCGGAATGCTATGACCATTGGGGAGGCGATTGGAACAGTTAACTTGGCTGAGGATCCTCAAAGTCCAGGGGGATGGAGAGGATTTCTTCGCATAAGGATGCAGATTGACTCTCGTCGCCCTCTCATGTCCGGGTTTCGGTTTCGCCATGCAAATGAGAGGATGAGAGCTCAGATCAAATATGAGAGACTCTCTACGTTTTGTCATAATTGCGGCCGTCTTGGCCACGTCGCGAGATCATGCACGTTTCCAGCACCAACTCCATGCACAAATACCATAAATCCTCGTCCTCCAAAATTTGAGCAACCCGAAGAAGATGCTAACATCAATGACCCAAATGCAGCAGAGATTCTTCCTCTGGTAAACCCGGCTTTAGTCTTTATTCAAGCCCTGGAAGCTAACAATCCTATTTCTGATATGTTTAATCTGCCAACCCAAGACCCAGAGGCCATTCTACCCAACCCTGCCAACCTCTCGGACACGCACCACCATCCAAATCCTCTCATCCCTCCGCATCATCCTCGAAGGTCAGGAGTTCTTACTATCAATGAGCCAATGGAGAATCCTATTGTTCGGGAAGATGCTCACATGGCGGACGACGATGTCAATCACACAGGGTGGAGTGAAAATGTGATATTCGGCCTAATGGATAAAAGGAAGGCCCATATGTTTGACGAGCAAATTGAGGCAATCCTTGCTGCTAATCCTTTTCTCAGGCCTACCCCTCCATCAATCCCTCCTAATGCCTACCTAGATTATCAGTCAACTTTTCTGCTTGCTAATTCCTTAGCTCTCCTAGGGACCTCTTCTCCAACCGATACCGCTGGCCCATCTACTGTCAATCATGAATTTCAAGCCCAAACCATTCAGCCCACCATTTTTTCTCACCCAACACAACCCACACCCAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 zf-CCHC_4 zf-RING_2

Protein Analysis

305

Amino Acids

33.91

Weight (kDa)

5.77

Isoelectric Point (pI)

55.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-CCHC_4 PF14392 38 - 84 1e-10 Zinc knuckle
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000073)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17821 FvH4_2g04610 FvH4_2g09611 FvH4_2g13563 FvH4_3g21493 FvH4_3g32115 FvH4_3g35060 FvH4_4g00220 FvH4_4g06410 FvH4_4g10367 FvH4_4g10367 FvH4_4g10367 FvH4_5g06101 FvH4_5g08842 FvH4_5g27366 FvH4_5g31283 FvH4_6g11611 FvH4_6g23032 FvH4_7g05661 FvH4_7g06172
malus_domestica MD13G1263700.v1.1
prunus_persica Prupe.1G292300_v2.0.a1 Prupe.5G009700_v2.0.a1 Prupe.6G158100_v2.0.a1 Prupe.8G025100_v2.0.a1 Prupe.8G042600_v2.0.a1
pyrus_communis pycom02g02250 pycom02g16030 pycom05g10490 pycom09g06450 pycom09g06460 pycom13g26200 pycom16g17700
rosa_chinensis RchiOBHm_Chr2g0163321 RchiOBHm_Chr4g0401981 RchiOBHm_Chr5g0005991 RchiOBHm_Chr5g0027191 RchiOBHm_Chr6g0249771
rosa_laevigata RLG00000001040 RLG00000001764 RLG00000002239 RLG00000002240 RLG00000003259 RLG00000008993 RLG00000013847 RLG00000014178 RLG00000015576 RLG00000017269 RLG00000017355 RLG00000018127 RLG00000018602 RLG00000018615 RLG00000019904 RLG00000020044 RLG00000021849 RLG00000021850 RLG00000027965 RLG00000029266 RLG00000029820 RLG00000031112 RLG00000031915 RLG00000033568 RLG00000035013 RLG00000035677 RLG00000036568 RLG00000036628
rosa_multiflora Rmu_co8254085.1_g000001 Rmu_co8462383.1_g000001 Rmu_sc0000185.1_g000049 Rmu_sc0000251.1_g000018 Rmu_sc0000367.1_g000094 Rmu_sc0000498.1_g000023 Rmu_sc0000868.1_g000005 Rmu_sc0001521.1_g000047 Rmu_sc0001534.1_g000007 Rmu_sc0002014.1_g000012 Rmu_sc0003214.1_g000009 Rmu_sc0003573.1_g000041 Rmu_sc0003832.1_g000023 Rmu_sc0004677.1_g000015 Rmu_sc0004967.1_g000014 Rmu_sc0005426.1_g000001 Rmu_sc0005621.1_g000004 Rmu_sc0005640.1_g000009 Rmu_sc0005947.1_g000034 Rmu_sc0006889.1_g000011 Rmu_sc0007121.1_g000014 Rmu_sc0009191.1_g000017 Rmu_sc0010556.1_g000011 Rmu_sc0011396.1_g000007 Rmu_sc0019862.1_g000002 Rmu_sc0022931.1_g000003 Rmu_sc0024164.1_g000001 Rmu_ssc0000391.1_g000027
rosa_roxburghii Rroxscaffold_1G00050060 Rroxscaffold_1G00061810 Rroxscaffold_2G00109590 Rroxscaffold_2G00113810 Rroxscaffold_2G00124040 Rroxscaffold_2G00143620 Rroxscaffold_2G00154760 Rroxscaffold_4G00302820 Rroxscaffold_4G00302830 Rroxscaffold_4G00308680 Rroxscaffold_4G00310240 Rroxscaffold_4G00327890 Rroxscaffold_5G00334600 Rroxscaffold_5G00336050 Rroxscaffold_5G00346560 Rroxscaffold_5G00347860 Rroxscaffold_5G00347870 Rroxscaffold_5G00349330 Rroxscaffold_5G00351980 Rroxscaffold_6G00395280 Rroxscaffold_6G00396750 Rroxscaffold_6G00402910 Rroxscaffold_7G00174790 Rroxscaffold_7G00177570 Rroxscaffold_7G00191820 Rroxscaffold_7G00203480 Rroxscaffold_7G00204380
rosa_rugosa Rorug01G0106600 Rorug01G0106600 Rorug01G0148500.1 Rorug02G0224200 Rorug02G0225500 Rorug02G0233000 Rorug02G0630400 Rorug03G0198000 Rorug03G0232600.1 Rorug03G0240500 Rorug04G0032900 Rorug04G0073300 Rorug04G0118500 Rorug04G0149600.1 Rorug04G0205100 Rorug04G0256700 Rorug05G0020200 Rorug05G0050000 Rorug05G0247300 Rorug05G0295100 Rorug05G0337900 Rorug05G0542600 Rorug06G0034800 Rorug06G0035100 Rorug06G0220100 Rorug07G0091900 Rorug07G0271200
rosa_samantha Rh1AG118200 Rh1AG253000 Rh1AG296300 Rh1AG409000 Rh1AG410600 Rh1BG073400 Rh1BG130400 Rh1BG147300 Rh1BG163600 Rh1CG016000 Rh1DG012200 Rh1DG012300 Rh1DG078600 Rh1DG078800 Rh1DG138100 Rh1DG179200 Rh1DG192600 Rh1DG194500 Rh1DG194600 Rh1DG214300 Rh1DG245900 Rh1DG267000 Rh1DG322700 Rh1DG442700 Rh2AG282000 Rh2AG423000 Rh2AG423100 Rh2AG460700 Rh2AG466200 Rh2AG513400 Rh2AG547000 Rh2BG277800 Rh2BG281200 Rh2BG298300 Rh2BG304300 Rh2BG433500 Rh2CG276000 Rh2CG282600 Rh2CG325500 Rh2CG393000 Rh2DG319200 Rh2DG443400 Rh3AG169300 Rh3AG303600 Rh3BG195000 Rh3BG282600 Rh3BG343400 Rh3BG343500 Rh3BG344100 Rh3CG111700 Rh3CG185700 Rh3CG259100 Rh3CG293000 Rh3CG317900 Rh3CG340900 Rh3CG341000 Rh3CG341100 Rh3CG354700 Rh3CG359200 Rh3CG368100 Rh3DG179900 Rh3DG288700 Rh3DG302600 Rh3DG316000 Rh3DG324500 Rh3DG324600 Rh3DG343200 Rh3DG343300 Rh3DG362400 Rh4AG071800 Rh4BG034000 Rh4BG044300 Rh4BG044400 Rh4BG069600 Rh4BG157400 Rh4CG007000 Rh4CG030400 Rh4CG037900 Rh4CG077700 Rh4CG115000 Rh4CG162400 Rh4CG162500 Rh4CG165500 Rh4CG165600 Rh4CG172900 Rh4CG239700 Rh4DG055900 Rh4DG173200 Rh5AG354900 Rh5AG511100 Rh5BG112600 Rh5BG541000 Rh5BG541100 Rh5BG549300 Rh5CG004400 Rh5CG315000 Rh5CG563800 Rh5CG572100 Rh5DG112200 Rh5DG191300 Rh5DG407600 Rh5DG407700 Rh5DG567500 Rh6AG002600 Rh6AG051400 Rh6AG199800 Rh6AG199900 Rh6AG206200 Rh6AG391000 Rh6AG391100 Rh6BG007500 Rh6BG053400 Rh6BG225900 Rh6BG227100 Rh6BG232400 Rh6CG091100 Rh6CG125400 Rh6CG186700 Rh6CG222700 Rh6CG222800 Rh6CG235500 Rh6CG247200 Rh6CG331200 Rh6CG465100 Rh6DG183500 Rh6DG213500 Rh6DG238800 Rh6DG263700 Rh7AG211800 Rh7AG441800 Rh7BG008600 Rh7BG253000 Rh7BG390000 Rh7CG189600 Rh7CG401500 Rh7CG424200 Rh7CG428700 Rh7CG479800 Rh7CG494300 Rh7DG177000 Rh7DG218700 Rh7DG254000 Rh7DG294800 Rh7DG407200 Rh7DG448800 Rh7DG461500
rosa_wichuraiana Rw0G012180 Rw1G005270 Rw1G012310 Rw1G016890 Rw1G021700 Rw2G014380 Rw2G027690 Rw3G016400 Rw3G028230 Rw3G029320 Rw4G002060 Rw4G002100 Rw4G003980 Rw4G014140 Rw4G014770 Rw4G014780 Rw4G015760 Rw4G021230 Rw5G000520 Rw5G035610 Rw6G001680 Rw6G017890 Rw6G027440 Rw6G034130 Rw6G034170 Rw7G012430 Rw7G033870

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 608
AccII CGCG 1 cut(s) 239
AciI CCGC 4 cut(s) 219, 518, 599, 828
AclWI GGATC 2 cut(s) 56, 69
AcoI YGGCCR 2 cut(s) 220, 229
AcsI RAATTY 2 cut(s) 302, 854
AdeI CACNNNGTG 1 cut(s) 624
AfiI CCNNNNNNNGG 1 cut(s) 144
AgsI TTSAA 2 cut(s) 392, 860
AjiI CACGTC 1 cut(s) 235
AjnI CCWGG 2 cut(s) 73, 396
AluBI AGCT 3 cut(s) 176, 404, 797
AluI AGCT 3 cut(s) 176, 404, 797
Alw21I GWGCWC 1 cut(s) 178
Alw26I GTCTC 1 cut(s) 187
AlwI GGATC 2 cut(s) 56, 69
AoxI GGCC 7 cut(s) 220, 229, 453, 646, 666, 722, 832
ApeKI GCWGC 2 cut(s) 347, 704
ApoI RAATTY 2 cut(s) 302, 854
AspA2I CCTAGG 1 cut(s) 802
AspS9I GGNCC 3 cut(s) 667, 807, 833
AsuC2I CCSGG 2 cut(s) 139, 374
AsuHPI GGTGA 1 cut(s) 884
AvaII GGWCC 1 cut(s) 807
AvrII CCTAGG 1 cut(s) 802
BalI TGGCCA 1 cut(s) 231
BamHI GGATCC 1 cut(s) 61
BanII GRGCYC 1 cut(s) 178
Bbv12I GWGCWC 1 cut(s) 178
BbvCI CCTCAGC 1 cut(s) 57
BbvI GCAGC 2 cut(s) 359, 691
BccI CCATC 4 cut(s) 75, 504, 742, 844
BceAI ACGGC 1 cut(s) 207
BcgI CGANNNNNNTGC 4 cut(s) 305, 339, 509, 543
BciT130I CCWGG 2 cut(s) 75, 398
BcnI CCSGG 2 cut(s) 139, 374
BcoDI GTCTC 1 cut(s) 187
BfaI CTAG 2 cut(s) 758, 803
BglI GCCNNNNNGGC 1 cut(s) 228
BisI GCNGC 3 cut(s) 220, 348, 705
BlnI CCTAGG 1 cut(s) 802
BlsI GCNGC 3 cut(s) 221, 349, 706
Bme1390I CCNGG 4 cut(s) 75, 139, 374, 398
Bme18I GGWCC 1 cut(s) 807
BmgBI CACGTC 1 cut(s) 235
BmgT120I GGNCC 3 cut(s) 667, 807, 833
BmiI GGNNCC 2 cut(s) 63, 808
BmrFI CCNGG 4 cut(s) 75, 139, 374, 398
BmsI GCATC 4 cut(s) 96, 313, 529, 577
BoxI GACNNNNGTC 1 cut(s) 120
BplI GAGNNNNNCTC 2 cut(s) 182, 214
Bpu10I CCTNAGC 2 cut(s) 57, 793
BpuMI CCSGG 2 cut(s) 139, 374
BsaBI GATNNNNATC 1 cut(s) 612
BsaJI CCNNGG 3 cut(s) 74, 396, 802
BsaXI ACNNNNNCTCC 2 cut(s) 799, 829
Bsc4I CCNNNNNNNGG 1 cut(s) 144
Bse8I GATNNNNATC 1 cut(s) 612
BseBI CCWGG 2 cut(s) 75, 398
BseDI CCNNGG 3 cut(s) 74, 396, 802
BseGI GGATG 6 cut(s) 86, 111, 174, 496, 510, 523
BseJI GATNNNNATC 1 cut(s) 612
BseLI CCNNNNNNNGG 1 cut(s) 144
BseMII CTCAG 3 cut(s) 48, 191, 733
BseX3I CGGCCG 1 cut(s) 220
BseXI GCAGC 2 cut(s) 359, 691
Bsh1236I CGCG 1 cut(s) 239
Bsh1285I CGRYCG 1 cut(s) 223
BshFI GGCC 7 cut(s) 222, 231, 455, 648, 668, 724, 834
BsiEI CGRYCG 1 cut(s) 223
BsiHKAI GWGCWC 1 cut(s) 178
BsiSI CCGG 2 cut(s) 138, 374
BslFI GGGAC 1 cut(s) 820
BslI CCNNNNNNNGG 1 cut(s) 144
BsmAI GTCTC 1 cut(s) 187
BsmFI GGGAC 1 cut(s) 820
BsmI GAATGC 1 cut(s) 19
BsnI GGCC 7 cut(s) 222, 231, 455, 648, 668, 724, 834
Bsp1286I GDGCHC 1 cut(s) 178
Bsp143I GATC 3 cut(s) 61, 180, 242
Bsp68I TCGCGA 1 cut(s) 239
BspACI CCGC 4 cut(s) 219, 518, 599, 828
BspANI GGCC 7 cut(s) 222, 231, 455, 648, 668, 724, 834
BspCNI CTCAG 3 cut(s) 49, 190, 732
BspFNI CGCG 1 cut(s) 239
BspHI TCATGA 1 cut(s) 850
BspLI GGNNCC 2 cut(s) 63, 808
BspPI GGATC 2 cut(s) 56, 69
BssECI CCNNGG 3 cut(s) 74, 396, 802
BssMI GATC 3 cut(s) 61, 180, 242
BssT1I CCWWGG 1 cut(s) 802
Bst2UI CCWGG 2 cut(s) 75, 398
Bst4CI ACNGT 2 cut(s) 46, 844
Bst6I CTCTTC 2 cut(s) 12, 817
BstAPI GCANNNNNTGC 1 cut(s) 701
BstC8I GCNNGC 2 cut(s) 783, 832
BstDEI CTNAG 4 cut(s) 57, 177, 719, 793
BstF5I GGATG 6 cut(s) 86, 111, 174, 496, 510, 523
BstFNI CGCG 1 cut(s) 239
BstKTI GATC 3 cut(s) 64, 183, 245
BstMAI GTCTC 1 cut(s) 187
BstMBI GATC 3 cut(s) 61, 180, 242
BstMCI CGRYCG 1 cut(s) 223
BstMWI GCNNNNNNNGC 4 cut(s) 228, 401, 596, 701
BstNI CCWGG 2 cut(s) 75, 398
BstPAI GACNNNNGTC 1 cut(s) 120
BstSCI CCNGG 4 cut(s) 73, 137, 372, 396
BstUI CGCG 1 cut(s) 239
BstV1I GCAGC 2 cut(s) 359, 691
BstX2I RGATCY 1 cut(s) 61
BstXI CCANNNNNNTGG 1 cut(s) 81
BstYI RGATCY 1 cut(s) 61
BstZI CGGCCG 1 cut(s) 220
BsuRI GGCC 7 cut(s) 222, 231, 455, 648, 668, 724, 834
BtrI CACGTC 1 cut(s) 235
BtsCI GGATG 6 cut(s) 86, 111, 174, 496, 510, 523
BtuMI TCGCGA 1 cut(s) 239
Cac8I GCNNGC 2 cut(s) 783, 832
CciI TCATGA 1 cut(s) 850
Cfr13I GGNCC 3 cut(s) 667, 807, 833
CviAII CATG 6 cut(s) 133, 155, 246, 270, 595, 851
DdeI CTNAG 4 cut(s) 57, 177, 719, 793
DpnI GATC 3 cut(s) 63, 182, 244
DpnII GATC 3 cut(s) 61, 180, 242
DraIII CACNNNGTG 1 cut(s) 624
DrdI GACNNNNNNGTC 1 cut(s) 608
DseDI GACNNNNNNGTC 1 cut(s) 608
EaeI YGGCCR 2 cut(s) 220, 229
EagI CGGCCG 1 cut(s) 220
Eam1104I CTCTTC 2 cut(s) 12, 817
EarI CTCTTC 2 cut(s) 12, 817
EciI GGCGGA 1 cut(s) 614
Ecl136II GAGCTC 1 cut(s) 176
EclXI CGGCCG 1 cut(s) 220
Eco130I CCWWGG 1 cut(s) 802
Eco147I AGGCCT 1 cut(s) 724
Eco24I GRGCYC 1 cut(s) 178
Eco47I GGWCC 1 cut(s) 807
Eco52I CGGCCG 1 cut(s) 220
Eco53kI GAGCTC 1 cut(s) 176
EcoICRI GAGCTC 1 cut(s) 176
EcoO109I RGGNCCY 1 cut(s) 807
EcoRII CCWGG 2 cut(s) 73, 396
EcoT14I CCWWGG 1 cut(s) 802
EcoT38I GRGCYC 1 cut(s) 178
ErhI CCWWGG 1 cut(s) 802
FaeI CATG 6 cut(s) 136, 158, 249, 273, 598, 854
FaqI GGGAC 1 cut(s) 820
FatI CATG 6 cut(s) 132, 154, 245, 269, 594, 850
FauNDI CATATG 1 cut(s) 672
Fnu4HI GCNGC 3 cut(s) 220, 348, 705
FokI GGATG 6 cut(s) 93, 118, 181, 483, 497, 510
FriOI GRGCYC 1 cut(s) 178
Fsp4HI GCNGC 3 cut(s) 220, 348, 705
FspBI CTAG 2 cut(s) 758, 803
GluI GCNGC 3 cut(s) 220, 348, 705
HaeIII GGCC 7 cut(s) 222, 231, 455, 648, 668, 724, 834
HapII CCGG 2 cut(s) 138, 374
Hin1II CATG 6 cut(s) 136, 158, 249, 273, 598, 854
HincII GTYRAC 2 cut(s) 49, 771
HindII GTYRAC 2 cut(s) 49, 771
HinfI GANTC 5 cut(s) 4, 116, 195, 355, 568
HpaI GTTAAC 1 cut(s) 49
HpaII CCGG 2 cut(s) 138, 374
HphI GGTGA 1 cut(s) 884
Hpy166II GTNNAC 3 cut(s) 49, 370, 771
Hpy188I TCNGA 4 cut(s) 12, 180, 421, 484
Hpy188III TCNNGA 4 cut(s) 238, 537, 581, 851
Hpy8I GTNNAC 3 cut(s) 49, 370, 771
Hpy99I CGWCG 3 cut(s) 126, 239, 608
HpyAV CCTTC 2 cut(s) 525, 658
HpyCH4III ACNGT 2 cut(s) 46, 844
HpyCH4IV ACGT 3 cut(s) 203, 234, 251
HpyCH4V TGCA 5 cut(s) 109, 158, 249, 273, 347
HpyF10VI GCNNNNNNNGC 4 cut(s) 228, 401, 596, 701
HpyF3I CTNAG 4 cut(s) 57, 177, 719, 793
HpySE526I ACGT 3 cut(s) 203, 234, 251
Hsp92II CATG 6 cut(s) 136, 158, 249, 273, 598, 854
KspAI GTTAAC 1 cut(s) 49
Kzo9I GATC 3 cut(s) 61, 180, 242
Lsp1109I GCAGC 2 cut(s) 359, 691
LweI GCATC 4 cut(s) 96, 313, 529, 577
MaeI CTAG 2 cut(s) 758, 803
MaeII ACGT 3 cut(s) 203, 234, 251
MalI GATC 3 cut(s) 63, 182, 244
MboI GATC 3 cut(s) 61, 180, 242
MboII GAAGA 6 cut(s) 86, 329, 332, 350, 596, 804
MfeI CAATTG 1 cut(s) 913
MflI RGATCY 1 cut(s) 61
MhlI GDGCHC 1 cut(s) 178
MlsI TGGCCA 1 cut(s) 231
MluCI AATT 6 cut(s) 214, 302, 687, 787, 854, 913
MluNI TGGCCA 1 cut(s) 231
MlyI GAGTC 2 cut(s) 110, 189
MmeI TCCRAC 1 cut(s) 842
Mox20I TGGCCA 1 cut(s) 231
MscI TGGCCA 1 cut(s) 231
MseI TTAA 2 cut(s) 48, 429
MslI CAYNNNNRTG 2 cut(s) 104, 159
Msp20I TGGCCA 1 cut(s) 231
MspA1I CMGCKG 1 cut(s) 830
MspI CCGG 2 cut(s) 138, 374
MspR9I CCNGG 4 cut(s) 75, 139, 374, 398
MunI CAATTG 1 cut(s) 913
Mva1269I GAATGC 1 cut(s) 19
MvaI CCWGG 2 cut(s) 75, 398
MvnI CGCG 1 cut(s) 239
MwoI GCNNNNNNNGC 4 cut(s) 228, 401, 596, 701
NciI CCSGG 2 cut(s) 139, 374
NdeI CATATG 1 cut(s) 672
NdeII GATC 3 cut(s) 61, 180, 242
NlaIII CATG 6 cut(s) 136, 158, 249, 273, 598, 854
NlaIV GGNNCC 2 cut(s) 63, 808
NruI TCGCGA 1 cut(s) 239
PagI TCATGA 1 cut(s) 850
PceI AGGCCT 1 cut(s) 724
PctI GAATGC 1 cut(s) 19
PfeI GAWTC 2 cut(s) 355, 568
PflFI GACNNNGTC 1 cut(s) 608
PkrI GCNGC 3 cut(s) 221, 349, 706
PleI GAGTC 2 cut(s) 110, 189
PpsI GAGTC 2 cut(s) 110, 189
PpuMI RGGWCCY 1 cut(s) 807
PshAI GACNNNNGTC 1 cut(s) 120
Psp124BI GAGCTC 1 cut(s) 178
Psp5II RGGWCCY 1 cut(s) 807
Psp6I CCWGG 2 cut(s) 73, 396
PspGI CCWGG 2 cut(s) 73, 396
PspN4I GGNNCC 2 cut(s) 63, 808
PspPI GGNCC 3 cut(s) 667, 807, 833
PspPPI RGGWCCY 1 cut(s) 807
PsuI RGATCY 1 cut(s) 61
PsyI GACNNNGTC 1 cut(s) 608
RruI TCGCGA 1 cut(s) 239
RseI CAYNNNNRTG 2 cut(s) 104, 159
SacI GAGCTC 1 cut(s) 178
SaqAI TTAA 2 cut(s) 48, 429
SatI GCNGC 3 cut(s) 220, 348, 705
Sau3AI GATC 3 cut(s) 61, 180, 242
Sau96I GGNCC 3 cut(s) 667, 807, 833
SchI GAGTC 2 cut(s) 110, 189
ScrFI CCNGG 4 cut(s) 75, 139, 374, 398
SduI GDGCHC 1 cut(s) 178
SfaNI GCATC 4 cut(s) 96, 313, 529, 577
SfiI GGCCNNNNNGGCC 1 cut(s) 228
SinI GGWCC 1 cut(s) 807
SmiMI CAYNNNNRTG 2 cut(s) 104, 159
Sse9I AATT 6 cut(s) 214, 302, 687, 787, 854, 913
SseBI AGGCCT 1 cut(s) 724
SsiI CCGC 4 cut(s) 219, 518, 599, 828
SspMI CTAG 2 cut(s) 758, 803
SstI GAGCTC 1 cut(s) 178
StuI AGGCCT 1 cut(s) 724
StyD4I CCNGG 4 cut(s) 73, 137, 372, 396
StyI CCWWGG 1 cut(s) 802
TaaI ACNGT 2 cut(s) 46, 844
TaiI ACGT 3 cut(s) 206, 237, 254
TaqI TCGA 1 cut(s) 529
TasI AATT 6 cut(s) 214, 302, 687, 787, 854, 913
TauI GCSGC 1 cut(s) 222
TfiI GAWTC 2 cut(s) 355, 568
Tru1I TTAA 2 cut(s) 48, 429
Tru9I TTAA 2 cut(s) 48, 429
TseI GCWGC 2 cut(s) 347, 704
TspDTI ATGAA 1 cut(s) 867
Tth111I GACNNNGTC 1 cut(s) 608
VpaK11BI GGWCC 1 cut(s) 807
XapI RAATTY 2 cut(s) 302, 854
XmaJI CCTAGG 1 cut(s) 802
XspI CTAG 2 cut(s) 758, 803
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.