Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 3 cut(s) | 65, 233, 337 |
| AclWI | GGATC | 4 cut(s) | 379, 392, 394, 407 |
| AcsI | RAATTY | 1 cut(s) | 274 |
| AfaI | GTAC | 1 cut(s) | 311 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 37, 76, 251 |
| AgsI | TTSAA | 2 cut(s) | 134, 173 |
| AluBI | AGCT | 5 cut(s) | 54, 92, 265, 374, 392 |
| AluI | AGCT | 5 cut(s) | 54, 92, 265, 374, 392 |
| Alw26I | GTCTC | 2 cut(s) | 64, 102 |
| AlwI | GGATC | 4 cut(s) | 379, 392, 394, 407 |
| AoxI | GGCC | 1 cut(s) | 332 |
| ApoI | RAATTY | 1 cut(s) | 274 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 113, 145 |
| AspS9I | GGNCC | 1 cut(s) | 333 |
| AsuNHI | GCTAGC | 1 cut(s) | 265 |
| BamHI | GGATCC | 2 cut(s) | 384, 399 |
| BcoDI | GTCTC | 2 cut(s) | 64, 102 |
| BfaI | CTAG | 1 cut(s) | 266 |
| BmgT120I | GGNCC | 1 cut(s) | 333 |
| BmiI | GGNNCC | 5 cut(s) | 24, 243, 335, 386, 401 |
| BmtI | GCTAGC | 1 cut(s) | 269 |
| BsaBI | GATNNNNATC | 1 cut(s) | 366 |
| BsaJI | CCNNGG | 1 cut(s) | 293 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 37, 76, 251 |
| Bse1I | ACTGG | 1 cut(s) | 386 |
| Bse8I | GATNNNNATC | 1 cut(s) | 366 |
| BseDI | CCNNGG | 1 cut(s) | 293 |
| BseGI | GGATG | 2 cut(s) | 124, 241 |
| BseJI | GATNNNNATC | 1 cut(s) | 366 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 37, 76, 251 |
| BseMII | CTCAG | 1 cut(s) | 333 |
| BseNI | ACTGG | 1 cut(s) | 386 |
| BseRI | GAGGAG | 1 cut(s) | 254 |
| BsgI | GTGCAG | 1 cut(s) | 201 |
| BshFI | GGCC | 1 cut(s) | 334 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 37, 76, 251 |
| BsmAI | GTCTC | 2 cut(s) | 64, 102 |
| BsmBI | CGTCTC | 1 cut(s) | 64 |
| BsnI | GGCC | 1 cut(s) | 334 |
| Bsp143I | GATC | 3 cut(s) | 193, 384, 399 |
| BspACI | CCGC | 3 cut(s) | 65, 233, 337 |
| BspANI | GGCC | 1 cut(s) | 334 |
| BspCNI | CTCAG | 1 cut(s) | 332 |
| BspLI | GGNNCC | 5 cut(s) | 24, 243, 335, 386, 401 |
| BspOI | GCTAGC | 1 cut(s) | 269 |
| BspPI | GGATC | 4 cut(s) | 379, 392, 394, 407 |
| BsrI | ACTGG | 1 cut(s) | 386 |
| BssECI | CCNNGG | 1 cut(s) | 293 |
| BssMI | GATC | 3 cut(s) | 193, 384, 399 |
| Bst4CI | ACNGT | 1 cut(s) | 314 |
| Bst6I | CTCTTC | 1 cut(s) | 109 |
| BstC8I | GCNNGC | 2 cut(s) | 246, 267 |
| BstDEI | CTNAG | 1 cut(s) | 319 |
| BstDSI | CCRYGG | 1 cut(s) | 293 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 249 |
| BstF5I | GGATG | 2 cut(s) | 124, 241 |
| BstKTI | GATC | 3 cut(s) | 196, 387, 402 |
| BstMAI | GTCTC | 2 cut(s) | 64, 102 |
| BstMBI | GATC | 3 cut(s) | 193, 384, 399 |
| BstX2I | RGATCY | 2 cut(s) | 384, 399 |
| BstYI | RGATCY | 2 cut(s) | 384, 399 |
| BsuRI | GGCC | 1 cut(s) | 334 |
| BtgI | CCRYGG | 1 cut(s) | 293 |
| BtgZI | GCGATG | 1 cut(s) | 170 |
| BtsCI | GGATG | 2 cut(s) | 124, 241 |
| Cac8I | GCNNGC | 2 cut(s) | 246, 267 |
| Cfr13I | GGNCC | 1 cut(s) | 333 |
| Csp6I | GTAC | 1 cut(s) | 310 |
| CviJI | RGCY | 9 cut(s) | 54, 92, 244, 265, 269, 334, 374, 392, 416 |
| CviKI_1 | RGCY | 9 cut(s) | 54, 92, 244, 265, 269, 334, 374, 392, 416 |
| CviQI | GTAC | 1 cut(s) | 310 |
| DdeI | CTNAG | 1 cut(s) | 319 |
| DpnI | GATC | 3 cut(s) | 195, 386, 401 |
| DpnII | GATC | 3 cut(s) | 193, 384, 399 |
| Eam1104I | CTCTTC | 1 cut(s) | 109 |
| EarI | CTCTTC | 1 cut(s) | 109 |
| EciI | GGCGGA | 1 cut(s) | 54 |
| Eco32I | GATATC | 1 cut(s) | 364 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 249 |
| EcoRV | GATATC | 1 cut(s) | 364 |
| Esp3I | CGTCTC | 1 cut(s) | 64 |
| FaiI | YATR | 1 cut(s) | 149 |
| FauI | CCCGC | 1 cut(s) | 344 |
| FokI | GGATG | 2 cut(s) | 131, 248 |
| FspBI | CTAG | 1 cut(s) | 266 |
| HaeIII | GGCC | 1 cut(s) | 334 |
| HindIII | AAGCTT | 1 cut(s) | 52 |
| HinfI | GANTC | 3 cut(s) | 200, 258, 408 |
| Hpy188III | TCNNGA | 1 cut(s) | 197 |
| HpyAV | CCTTC | 1 cut(s) | 134 |
| HpyCH4III | ACNGT | 1 cut(s) | 314 |
| HpyCH4V | TGCA | 2 cut(s) | 182, 248 |
| HpyF3I | CTNAG | 1 cut(s) | 319 |
| Kzo9I | GATC | 3 cut(s) | 193, 384, 399 |
| LmnI | GCTCC | 1 cut(s) | 241 |
| LpnPI | CCDG | 6 cut(s) | 46, 182, 189, 258, 367, 418 |
| MaeI | CTAG | 1 cut(s) | 266 |
| MalI | GATC | 3 cut(s) | 195, 386, 401 |
| MboI | GATC | 3 cut(s) | 193, 384, 399 |
| MboII | GAAGA | 2 cut(s) | 96, 146 |
| MflI | RGATCY | 2 cut(s) | 384, 399 |
| MluCI | AATT | 2 cut(s) | 274, 421 |
| MnlI | CCTC | 5 cut(s) | 80, 118, 224, 232, 277 |
| MseI | TTAA | 2 cut(s) | 48, 165 |
| NdeII | GATC | 3 cut(s) | 193, 384, 399 |
| NheI | GCTAGC | 1 cut(s) | 265 |
| NlaIV | GGNNCC | 5 cut(s) | 24, 243, 335, 386, 401 |
| PfeI | GAWTC | 3 cut(s) | 200, 258, 408 |
| PspN4I | GGNNCC | 5 cut(s) | 24, 243, 335, 386, 401 |
| PspPI | GGNCC | 1 cut(s) | 333 |
| PsuI | RGATCY | 2 cut(s) | 384, 399 |
| RsaI | GTAC | 1 cut(s) | 311 |
| RsaNI | GTAC | 1 cut(s) | 310 |
| SaqAI | TTAA | 2 cut(s) | 48, 165 |
| Sau3AI | GATC | 3 cut(s) | 193, 384, 399 |
| Sau96I | GGNCC | 1 cut(s) | 333 |
| SetI | ASST | 8 cut(s) | 56, 94, 145, 216, 267, 376, 380, 394 |
| Sse9I | AATT | 2 cut(s) | 274, 421 |
| SsiI | CCGC | 3 cut(s) | 65, 233, 337 |
| SspMI | CTAG | 1 cut(s) | 266 |
| TaaI | ACNGT | 1 cut(s) | 314 |
| TaqI | TCGA | 1 cut(s) | 370 |
| TasI | AATT | 2 cut(s) | 274, 421 |
| TfiI | GAWTC | 3 cut(s) | 200, 258, 408 |
| Tru1I | TTAA | 2 cut(s) | 48, 165 |
| Tru9I | TTAA | 2 cut(s) | 48, 165 |
| TspDTI | ATGAA | 3 cut(s) | 17, 153, 369 |
| TspGWI | ACGGA | 1 cut(s) | 282 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 249 |
| XapI | RAATTY | 1 cut(s) | 274 |
| XspI | CTAG | 1 cut(s) | 266 |