FvH4_5g31283

Domain of unknown function (DUF4283)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0000073
Physical Location & Seq
Reverse (-)
22188798 .. 22189785
988 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g31283.t1

Sequence Viewer

Length: 852 bp
ATGTCAATCTCAGAAAATCCTCCACCGCCTGATATTTATGAGCTCCCCAGCCACTTCCCTCCCCCTCTCAAACCATCCCTCCAAAACCAAGATCCAAACAAAACCATGGCAAACCACCAACAAGAAGCTGGCCTGGAACTTTTCGACCTGGCCCAAATGGAGGAATTTCCTCACCAGCTGATAGGCTGCCTCGTCTCGGACAAGTCTCTAAATGTTGCAACTGTCATCAGAATGCTCCGAAGTGCGTGGCAAGAGATAGGTTGGACTCACCTTGAGCCAATACATGATTACCATGTCTATTCTATAACAGTGGAAAGTGAAGAAGCAGGCCAAACTCTGAAGGAGCGGAGCCCTTGGTCTGTAATGGGTTACAGTTTTGGCATCCATAACTGGCCGCTGGAAAACAGAATCCAAGATCTTCCCCTCCACATGATGTCCTTCTGGGTCCAAGTTCACAATTTACCTCGTCAAAACATGACAGCTCACAATGCCATTACAATTGGTGCAGCCCTGGGCACCATTGAAGAAGTGGAGGACCCTCACAGCCCAGAAGGAAGGAGAGGTTTCCTCAGAATCAGAACCCAAATAGACACCCGCAATCCTCTAAAGGCGACTTTCAAATTCCAGCGAGGAAACCCACCGAAGATGGCCAATTTCCGATATGAGCGCCTATTAGATTTTTGCTACGCTTGCGGGCGTCTTGGTCACATTGCAAGAAATTGTATCCGTTTTGGTCCCAACAGTAGCTGCTCAATCGATCCAAATGATTACATGCAAGTATGGAGAAGAGATGAGAGCCAGAGCAGTAAGAAGAATCCTTCCCCCTATTCCTCTAATCAATATGCAAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 zf-CCHC_4 zf-RING_2

Protein Analysis

284

Amino Acids

32.54

Weight (kDa)

6.46

Isoelectric Point (pI)

61.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-CCHC_4 PF14392 196 - 241 2.4e-10 Zinc knuckle
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000073)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17821 FvH4_2g04610 FvH4_2g09611 FvH4_2g13563 FvH4_3g21493 FvH4_3g32115 FvH4_3g35060 FvH4_4g00220 FvH4_4g06410 FvH4_4g10367 FvH4_4g10367 FvH4_4g10367 FvH4_5g06101 FvH4_5g08842 FvH4_5g27366 FvH4_5g31283 FvH4_6g11611 FvH4_6g23032 FvH4_7g05661 FvH4_7g06172
malus_domestica MD13G1263700.v1.1
prunus_persica Prupe.1G292300_v2.0.a1 Prupe.5G009700_v2.0.a1 Prupe.6G158100_v2.0.a1 Prupe.8G025100_v2.0.a1 Prupe.8G042600_v2.0.a1
pyrus_communis pycom02g02250 pycom02g16030 pycom05g10490 pycom09g06450 pycom09g06460 pycom13g26200 pycom16g17700
rosa_chinensis RchiOBHm_Chr2g0163321 RchiOBHm_Chr4g0401981 RchiOBHm_Chr5g0005991 RchiOBHm_Chr5g0027191 RchiOBHm_Chr6g0249771
rosa_laevigata RLG00000001040 RLG00000001764 RLG00000002239 RLG00000002240 RLG00000003259 RLG00000008993 RLG00000013847 RLG00000014178 RLG00000015576 RLG00000017269 RLG00000017355 RLG00000018127 RLG00000018602 RLG00000018615 RLG00000019904 RLG00000020044 RLG00000021849 RLG00000021850 RLG00000027965 RLG00000029266 RLG00000029820 RLG00000031112 RLG00000031915 RLG00000033568 RLG00000035013 RLG00000035677 RLG00000036568 RLG00000036628
rosa_multiflora Rmu_co8254085.1_g000001 Rmu_co8462383.1_g000001 Rmu_sc0000185.1_g000049 Rmu_sc0000251.1_g000018 Rmu_sc0000367.1_g000094 Rmu_sc0000498.1_g000023 Rmu_sc0000868.1_g000005 Rmu_sc0001521.1_g000047 Rmu_sc0001534.1_g000007 Rmu_sc0002014.1_g000012 Rmu_sc0003214.1_g000009 Rmu_sc0003573.1_g000041 Rmu_sc0003832.1_g000023 Rmu_sc0004677.1_g000015 Rmu_sc0004967.1_g000014 Rmu_sc0005426.1_g000001 Rmu_sc0005621.1_g000004 Rmu_sc0005640.1_g000009 Rmu_sc0005947.1_g000034 Rmu_sc0006889.1_g000011 Rmu_sc0007121.1_g000014 Rmu_sc0009191.1_g000017 Rmu_sc0010556.1_g000011 Rmu_sc0011396.1_g000007 Rmu_sc0019862.1_g000002 Rmu_sc0022931.1_g000003 Rmu_sc0024164.1_g000001 Rmu_ssc0000391.1_g000027
rosa_roxburghii Rroxscaffold_1G00050060 Rroxscaffold_1G00061810 Rroxscaffold_2G00109590 Rroxscaffold_2G00113810 Rroxscaffold_2G00124040 Rroxscaffold_2G00143620 Rroxscaffold_2G00154760 Rroxscaffold_4G00302820 Rroxscaffold_4G00302830 Rroxscaffold_4G00308680 Rroxscaffold_4G00310240 Rroxscaffold_4G00327890 Rroxscaffold_5G00334600 Rroxscaffold_5G00336050 Rroxscaffold_5G00346560 Rroxscaffold_5G00347860 Rroxscaffold_5G00347870 Rroxscaffold_5G00349330 Rroxscaffold_5G00351980 Rroxscaffold_6G00395280 Rroxscaffold_6G00396750 Rroxscaffold_6G00402910 Rroxscaffold_7G00174790 Rroxscaffold_7G00177570 Rroxscaffold_7G00191820 Rroxscaffold_7G00203480 Rroxscaffold_7G00204380
rosa_rugosa Rorug01G0106600 Rorug01G0106600 Rorug01G0148500.1 Rorug02G0224200 Rorug02G0225500 Rorug02G0233000 Rorug02G0630400 Rorug03G0198000 Rorug03G0232600.1 Rorug03G0240500 Rorug04G0032900 Rorug04G0073300 Rorug04G0118500 Rorug04G0149600.1 Rorug04G0205100 Rorug04G0256700 Rorug05G0020200 Rorug05G0050000 Rorug05G0247300 Rorug05G0295100 Rorug05G0337900 Rorug05G0542600 Rorug06G0034800 Rorug06G0035100 Rorug06G0220100 Rorug07G0091900 Rorug07G0271200
rosa_samantha Rh1AG118200 Rh1AG253000 Rh1AG296300 Rh1AG409000 Rh1AG410600 Rh1BG073400 Rh1BG130400 Rh1BG147300 Rh1BG163600 Rh1CG016000 Rh1DG012200 Rh1DG012300 Rh1DG078600 Rh1DG078800 Rh1DG138100 Rh1DG179200 Rh1DG192600 Rh1DG194500 Rh1DG194600 Rh1DG214300 Rh1DG245900 Rh1DG267000 Rh1DG322700 Rh1DG442700 Rh2AG282000 Rh2AG423000 Rh2AG423100 Rh2AG460700 Rh2AG466200 Rh2AG513400 Rh2AG547000 Rh2BG277800 Rh2BG281200 Rh2BG298300 Rh2BG304300 Rh2BG433500 Rh2CG276000 Rh2CG282600 Rh2CG325500 Rh2CG393000 Rh2DG319200 Rh2DG443400 Rh3AG169300 Rh3AG303600 Rh3BG195000 Rh3BG282600 Rh3BG343400 Rh3BG343500 Rh3BG344100 Rh3CG111700 Rh3CG185700 Rh3CG259100 Rh3CG293000 Rh3CG317900 Rh3CG340900 Rh3CG341000 Rh3CG341100 Rh3CG354700 Rh3CG359200 Rh3CG368100 Rh3DG179900 Rh3DG288700 Rh3DG302600 Rh3DG316000 Rh3DG324500 Rh3DG324600 Rh3DG343200 Rh3DG343300 Rh3DG362400 Rh4AG071800 Rh4BG034000 Rh4BG044300 Rh4BG044400 Rh4BG069600 Rh4BG157400 Rh4CG007000 Rh4CG030400 Rh4CG037900 Rh4CG077700 Rh4CG115000 Rh4CG162400 Rh4CG162500 Rh4CG165500 Rh4CG165600 Rh4CG172900 Rh4CG239700 Rh4DG055900 Rh4DG173200 Rh5AG354900 Rh5AG511100 Rh5BG112600 Rh5BG541000 Rh5BG541100 Rh5BG549300 Rh5CG004400 Rh5CG315000 Rh5CG563800 Rh5CG572100 Rh5DG112200 Rh5DG191300 Rh5DG407600 Rh5DG407700 Rh5DG567500 Rh6AG002600 Rh6AG051400 Rh6AG199800 Rh6AG199900 Rh6AG206200 Rh6AG391000 Rh6AG391100 Rh6BG007500 Rh6BG053400 Rh6BG225900 Rh6BG227100 Rh6BG232400 Rh6CG091100 Rh6CG125400 Rh6CG186700 Rh6CG222700 Rh6CG222800 Rh6CG235500 Rh6CG247200 Rh6CG331200 Rh6CG465100 Rh6DG183500 Rh6DG213500 Rh6DG238800 Rh6DG263700 Rh7AG211800 Rh7AG441800 Rh7BG008600 Rh7BG253000 Rh7BG390000 Rh7CG189600 Rh7CG401500 Rh7CG424200 Rh7CG428700 Rh7CG479800 Rh7CG494300 Rh7DG177000 Rh7DG218700 Rh7DG254000 Rh7DG294800 Rh7DG407200 Rh7DG448800 Rh7DG461500
rosa_wichuraiana Rw0G012180 Rw1G005270 Rw1G012310 Rw1G016890 Rw1G021700 Rw2G014380 Rw2G027690 Rw3G016400 Rw3G028230 Rw3G029320 Rw4G002060 Rw4G002100 Rw4G003980 Rw4G014140 Rw4G014770 Rw4G014780 Rw4G015760 Rw4G021230 Rw5G000520 Rw5G035610 Rw6G001680 Rw6G017890 Rw6G027440 Rw6G034130 Rw6G034170 Rw7G012430 Rw7G033870

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 515
AccBSI CCGCTC 1 cut(s) 346
AciI CCGC 5 cut(s) 26, 346, 395, 595, 693
AclWI GGATC 2 cut(s) 86, 752
AcoI YGGCCR 2 cut(s) 392, 648
AcsI RAATTY 2 cut(s) 164, 620
AcuI CTGAAG 1 cut(s) 359
AcyI GRCGYC 1 cut(s) 697
AfiI CCNNNNNNNGG 2 cut(s) 160, 196
AgsI TTSAA 2 cut(s) 524, 619
AjnI CCWGG 3 cut(s) 132, 147, 510
AluBI AGCT 5 cut(s) 43, 128, 178, 482, 747
AluI AGCT 5 cut(s) 43, 128, 178, 482, 747
Alw21I GWGCWC 1 cut(s) 45
Alw26I GTCTC 2 cut(s) 199, 210
AlwI GGATC 2 cut(s) 86, 752
AlwNI CAGNNNCTG 1 cut(s) 747
AoxI GGCC 5 cut(s) 130, 150, 328, 392, 648
ApeKI GCWGC 3 cut(s) 186, 506, 747
ApoI RAATTY 2 cut(s) 164, 620
AspLEI GCGC 1 cut(s) 669
AspS9I GGNCC 4 cut(s) 151, 445, 535, 734
AsuHPI GGTGA 2 cut(s) 164, 260
AvaII GGWCC 3 cut(s) 445, 535, 734
BaeGI GKGCMC 1 cut(s) 518
BalI TGGCCA 1 cut(s) 650
BanI GGYRCC 1 cut(s) 515
BanII GRGCYC 2 cut(s) 45, 353
Bbv12I GWGCWC 1 cut(s) 45
BbvI GCAGC 3 cut(s) 173, 518, 734
BccI CCATC 2 cut(s) 82, 640
BciT130I CCWGG 3 cut(s) 134, 149, 512
BciVI GTATCC 1 cut(s) 734
BcoDI GTCTC 2 cut(s) 199, 210
BfoI RGCGCY 1 cut(s) 670
BfuI GTATCC 1 cut(s) 734
BglII AGATCT 1 cut(s) 415
BisI GCNGC 4 cut(s) 187, 395, 507, 748
BlsI GCNGC 4 cut(s) 188, 396, 508, 749
Bme1390I CCNGG 3 cut(s) 134, 149, 512
Bme18I GGWCC 3 cut(s) 445, 535, 734
BmgT120I GGNCC 4 cut(s) 151, 445, 535, 734
BmiI GGNNCC 5 cut(s) 350, 446, 517, 537, 736
BmrFI CCNGG 3 cut(s) 134, 149, 512
BmsI GCATC 1 cut(s) 390
BplI GAGNNNNNCTC 2 cut(s) 552, 584
BpuEI CTTGAG 1 cut(s) 293
Bsa29I ATCGAT 1 cut(s) 756
BsaHI GRCGYC 1 cut(s) 697
BsaJI CCNNGG 4 cut(s) 105, 353, 510, 511
BsaXI ACNNNNNCTCC 2 cut(s) 63, 93
Bsc4I CCNNNNNNNGG 2 cut(s) 160, 196
Bse1I ACTGG 1 cut(s) 395
Bse3DI GCAATG 1 cut(s) 708
BseBI CCWGG 3 cut(s) 134, 149, 512
BseCI ATCGAT 1 cut(s) 756
BseDI CCNNGG 4 cut(s) 105, 353, 510, 511
BseGI GGATG 2 cut(s) 74, 381
BseLI CCNNNNNNNGG 2 cut(s) 160, 196
BseMI GCAATG 1 cut(s) 708
BseMII CTCAG 2 cut(s) 24, 583
BseNI ACTGG 1 cut(s) 395
BseSI GKGCMC 1 cut(s) 518
BseXI GCAGC 3 cut(s) 173, 518, 734
BseYI CCCAGC 1 cut(s) 47
BsgI GTGCAG 1 cut(s) 525
BshFI GGCC 5 cut(s) 132, 152, 330, 394, 650
BshNI GGYRCC 1 cut(s) 515
BshVI ATCGAT 1 cut(s) 756
BsiHKAI GWGCWC 1 cut(s) 45
BslFI GGGAC 1 cut(s) 720
BslI CCNNNNNNNGG 2 cut(s) 160, 196
BsmAI GTCTC 2 cut(s) 199, 210
BsmBI CGTCTC 1 cut(s) 199
BsmFI GGGAC 1 cut(s) 720
BsmI GAATGC 1 cut(s) 237
BsnI GGCC 5 cut(s) 132, 152, 330, 394, 650
Bsp1286I GDGCHC 3 cut(s) 45, 353, 518
Bsp143I GATC 3 cut(s) 91, 415, 757
Bsp19I CCATGG 1 cut(s) 105
BspACI CCGC 5 cut(s) 26, 346, 395, 595, 693
BspANI GGCC 5 cut(s) 132, 152, 330, 394, 650
BspCNI CTCAG 2 cut(s) 23, 582
BspDI ATCGAT 1 cut(s) 756
BspLI GGNNCC 5 cut(s) 350, 446, 517, 537, 736
BspPI GGATC 2 cut(s) 86, 752
BspT107I GGYRCC 1 cut(s) 515
BsrBI CCGCTC 1 cut(s) 346
BsrDI GCAATG 1 cut(s) 708
BsrI ACTGG 1 cut(s) 395
BssECI CCNNGG 4 cut(s) 105, 353, 510, 511
BssMI GATC 3 cut(s) 91, 415, 757
BssNI GRCGYC 1 cut(s) 697
BssT1I CCWWGG 2 cut(s) 105, 353
Bst2UI CCWGG 3 cut(s) 134, 149, 512
Bst4CI ACNGT 4 cut(s) 223, 310, 374, 743
Bst6I CTCTTC 1 cut(s) 781
BstACI GRCGYC 1 cut(s) 697
BstC8I GCNNGC 4 cut(s) 130, 328, 691, 695
BstDEI CTNAG 2 cut(s) 10, 569
BstDSI CCRYGG 1 cut(s) 105
BstF5I GGATG 2 cut(s) 74, 381
BstH2I RGCGCY 1 cut(s) 670
BstHHI GCGC 1 cut(s) 669
BstKTI GATC 3 cut(s) 94, 418, 760
BstMAI GTCTC 2 cut(s) 199, 210
BstMBI GATC 3 cut(s) 91, 415, 757
BstMWI GCNNNNNNNGC 2 cut(s) 488, 690
BstNI CCWGG 3 cut(s) 134, 149, 512
BstNSI RCATGY 1 cut(s) 775
BstSCI CCNGG 3 cut(s) 132, 147, 510
BstSLI GKGCMC 1 cut(s) 518
BstV1I GCAGC 3 cut(s) 173, 518, 734
BstX2I RGATCY 2 cut(s) 91, 415
BstYI RGATCY 2 cut(s) 91, 415
Bsu15I ATCGAT 1 cut(s) 756
BsuI GTATCC 1 cut(s) 734
BsuRI GGCC 5 cut(s) 132, 152, 330, 394, 650
BsuTUI ATCGAT 1 cut(s) 756
BtgI CCRYGG 1 cut(s) 105
BtsCI GGATG 2 cut(s) 74, 381
BtsIMutI CAGTG 1 cut(s) 315
Cac8I GCNNGC 4 cut(s) 130, 328, 691, 695
CaiI CAGNNNCTG 1 cut(s) 747
CfoI GCGC 1 cut(s) 669
Cfr13I GGNCC 4 cut(s) 151, 445, 535, 734
ClaI ATCGAT 1 cut(s) 756
CseI GACGC 1 cut(s) 686
CviAII CATG 6 cut(s) 106, 284, 293, 430, 475, 772
DdeI CTNAG 2 cut(s) 10, 569
DpnI GATC 3 cut(s) 93, 417, 759
DpnII GATC 3 cut(s) 91, 415, 757
EaeI YGGCCR 2 cut(s) 392, 648
Eam1104I CTCTTC 1 cut(s) 781
EarI CTCTTC 1 cut(s) 781
Ecl136II GAGCTC 1 cut(s) 43
Eco130I CCWWGG 2 cut(s) 105, 353
Eco24I GRGCYC 2 cut(s) 45, 353
Eco47I GGWCC 3 cut(s) 445, 535, 734
Eco53kI GAGCTC 1 cut(s) 43
Eco57I CTGAAG 1 cut(s) 359
EcoICRI GAGCTC 1 cut(s) 43
EcoO109I RGGNCCY 1 cut(s) 535
EcoRII CCWGG 3 cut(s) 132, 147, 510
EcoT14I CCWWGG 2 cut(s) 105, 353
EcoT38I GRGCYC 2 cut(s) 45, 353
ErhI CCWWGG 2 cut(s) 105, 353
Esp3I CGTCTC 1 cut(s) 199
FaeI CATG 6 cut(s) 109, 287, 296, 433, 478, 775
FaqI GGGAC 1 cut(s) 720
FatI CATG 6 cut(s) 105, 283, 292, 429, 474, 771
FauI CCCGC 2 cut(s) 602, 686
Fnu4HI GCNGC 4 cut(s) 187, 395, 507, 748
FokI GGATG 2 cut(s) 61, 368
FriOI GRGCYC 2 cut(s) 45, 353
Fsp4HI GCNGC 4 cut(s) 187, 395, 507, 748
GlaI GCGC 1 cut(s) 668
GluI GCNGC 4 cut(s) 187, 395, 507, 748
GsaI CCCAGC 1 cut(s) 51
HaeII RGCGCY 1 cut(s) 670
HaeIII GGCC 5 cut(s) 132, 152, 330, 394, 650
HgaI GACGC 1 cut(s) 686
HhaI GCGC 1 cut(s) 669
Hin1I GRCGYC 1 cut(s) 697
Hin1II CATG 6 cut(s) 109, 287, 296, 433, 478, 775
Hin6I GCGC 1 cut(s) 667
HinP1I GCGC 1 cut(s) 667
HinfI GANTC 4 cut(s) 265, 408, 573, 814
HphI GGTGA 2 cut(s) 164, 260
Hpy166II GTNNAC 1 cut(s) 454
Hpy188I TCNGA 8 cut(s) 13, 199, 230, 239, 339, 572, 578, 659
Hpy8I GTNNAC 1 cut(s) 454
HpyAV CCTTC 5 cut(s) 334, 448, 545, 549, 828
HpyCH4III ACNGT 4 cut(s) 223, 310, 374, 743
HpyCH4V TGCA 5 cut(s) 218, 506, 713, 775, 845
HpyF10VI GCNNNNNNNGC 2 cut(s) 488, 690
HpyF3I CTNAG 2 cut(s) 10, 569
Hsp92I GRCGYC 1 cut(s) 697
Hsp92II CATG 6 cut(s) 109, 287, 296, 433, 478, 775
HspAI GCGC 1 cut(s) 667
Kzo9I GATC 3 cut(s) 91, 415, 757
LmnI GCTCC 4 cut(s) 48, 240, 343, 348
Lsp1109I GCAGC 3 cut(s) 173, 518, 734
LweI GCATC 1 cut(s) 390
MaeIII GTNAC 2 cut(s) 368, 704
MalI GATC 3 cut(s) 93, 417, 759
MbiI CCGCTC 1 cut(s) 346
MboI GATC 3 cut(s) 91, 415, 757
MboII GAAGA 6 cut(s) 332, 410, 536, 655, 798, 823
MfeI CAATTG 1 cut(s) 498
MflI RGATCY 2 cut(s) 91, 415
MhlI GDGCHC 3 cut(s) 45, 353, 518
MlsI TGGCCA 1 cut(s) 650
MluCI AATT 6 cut(s) 164, 457, 498, 620, 652, 718
MluNI TGGCCA 1 cut(s) 650
MlyI GAGTC 1 cut(s) 259
MmeI TCCRAC 1 cut(s) 242
Mox20I TGGCCA 1 cut(s) 650
MscI TGGCCA 1 cut(s) 650
MslI CAYNNNNRTG 1 cut(s) 230
Msp20I TGGCCA 1 cut(s) 650
MspA1I CMGCKG 2 cut(s) 178, 397
MspR9I CCNGG 3 cut(s) 134, 149, 512
MunI CAATTG 1 cut(s) 498
Mva1269I GAATGC 1 cut(s) 237
MvaI CCWGG 3 cut(s) 134, 149, 512
MwoI GCNNNNNNNGC 2 cut(s) 488, 690
NcoI CCATGG 1 cut(s) 105
NdeII GATC 3 cut(s) 91, 415, 757
NlaIII CATG 6 cut(s) 109, 287, 296, 433, 478, 775
NlaIV GGNNCC 5 cut(s) 350, 446, 517, 537, 736
NmuCI GTSAC 1 cut(s) 704
NspI RCATGY 1 cut(s) 775
PasI CCCWGGG 1 cut(s) 511
PctI GAATGC 1 cut(s) 237
PfeI GAWTC 3 cut(s) 408, 573, 814
PkrI GCNGC 4 cut(s) 188, 396, 508, 749
PleI GAGTC 1 cut(s) 259
PpsI GAGTC 1 cut(s) 259
PpuMI RGGWCCY 1 cut(s) 535
Psp124BI GAGCTC 1 cut(s) 45
Psp5II RGGWCCY 1 cut(s) 535
Psp6I CCWGG 3 cut(s) 132, 147, 510
PspFI CCCAGC 1 cut(s) 47
PspGI CCWGG 3 cut(s) 132, 147, 510
PspN4I GGNNCC 5 cut(s) 350, 446, 517, 537, 736
PspPI GGNCC 4 cut(s) 151, 445, 535, 734
PspPPI RGGWCCY 1 cut(s) 535
PstNI CAGNNNCTG 1 cut(s) 747
PsuI RGATCY 2 cut(s) 91, 415
PvuII CAGCTG 1 cut(s) 178
RseI CAYNNNNRTG 1 cut(s) 230
SacI GAGCTC 1 cut(s) 45
SatI GCNGC 4 cut(s) 187, 395, 507, 748
Sau3AI GATC 3 cut(s) 91, 415, 757
Sau96I GGNCC 4 cut(s) 151, 445, 535, 734
SchI GAGTC 1 cut(s) 259
ScrFI CCNGG 3 cut(s) 134, 149, 512
SduI GDGCHC 3 cut(s) 45, 353, 518
SfaNI GCATC 1 cut(s) 390
SinI GGWCC 3 cut(s) 445, 535, 734
SmiMI CAYNNNNRTG 1 cut(s) 230
SmlI CTYRAG 1 cut(s) 272
SmoI CTYRAG 1 cut(s) 272
Sse9I AATT 6 cut(s) 164, 457, 498, 620, 652, 718
SsiI CCGC 5 cut(s) 26, 346, 395, 595, 693
SstI GAGCTC 1 cut(s) 45
StyD4I CCNGG 3 cut(s) 132, 147, 510
StyI CCWWGG 2 cut(s) 105, 353
TaaI ACNGT 4 cut(s) 223, 310, 374, 743
TaqI TCGA 2 cut(s) 144, 756
TasI AATT 6 cut(s) 164, 457, 498, 620, 652, 718
TauI GCSGC 1 cut(s) 397
TfiI GAWTC 3 cut(s) 408, 573, 814
TscAI CASTG 1 cut(s) 315
TseFI GTSAC 1 cut(s) 704
TseI GCWGC 3 cut(s) 186, 506, 747
Tsp45I GTSAC 1 cut(s) 704
TspGWI ACGGA 1 cut(s) 716
TspRI CASTG 1 cut(s) 315
VpaK11BI GGWCC 3 cut(s) 445, 535, 734
XapI RAATTY 2 cut(s) 164, 620
XceI RCATGY 1 cut(s) 775
XcmI CCANNNNNNNNNTGG 2 cut(s) 125, 526
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.