Domain of unknown function (DUF4283)
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| zf-CCHC_4 | PF14392 | 136 - 167 | 1.3e-06 | Zinc knuckle |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 641 |
| Acc36I | ACCTGC | 3 cut(s) | 621, 641, 688 |
| AccB1I | GGYRCC | 1 cut(s) | 709 |
| AccII | CGCG | 2 cut(s) | 47, 265 |
| AciI | CCGC | 2 cut(s) | 79, 519 |
| AclWI | GGATC | 2 cut(s) | 302, 600 |
| AcoI | YGGCCR | 2 cut(s) | 164, 751 |
| AcsI | RAATTY | 1 cut(s) | 789 |
| AcuI | CTGAAG | 1 cut(s) | 273 |
| AfaI | GTAC | 1 cut(s) | 499 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 349, 541, 589, 869 |
| AgsI | TTSAA | 4 cut(s) | 32, 101, 601, 641 |
| AjiI | CACGTC | 1 cut(s) | 802 |
| AjnI | CCWGG | 2 cut(s) | 331, 382 |
| AluBI | AGCT | 2 cut(s) | 529, 938 |
| AluI | AGCT | 2 cut(s) | 529, 938 |
| Alw21I | GWGCWC | 1 cut(s) | 280 |
| Alw26I | GTCTC | 1 cut(s) | 837 |
| AlwI | GGATC | 2 cut(s) | 302, 600 |
| Ama87I | CYCGRG | 1 cut(s) | 366 |
| AoxI | GGCC | 4 cut(s) | 164, 532, 751, 916 |
| ApeKI | GCWGC | 3 cut(s) | 141, 144, 943 |
| ApoI | RAATTY | 1 cut(s) | 789 |
| AspLEI | GCGC | 3 cut(s) | 9, 47, 265 |
| AspS9I | GGNCC | 5 cut(s) | 122, 533, 700, 872, 916 |
| AsuHPI | GGTGA | 4 cut(s) | 4, 572, 775, 786 |
| AvaI | CYCGRG | 1 cut(s) | 366 |
| AvaII | GGWCC | 3 cut(s) | 122, 700, 872 |
| BalI | TGGCCA | 2 cut(s) | 166, 753 |
| BanI | GGYRCC | 1 cut(s) | 709 |
| BanII | GRGCYC | 1 cut(s) | 373 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 12, 44 |
| Bbv12I | GWGCWC | 1 cut(s) | 280 |
| BbvCI | CCTCAGC | 1 cut(s) | 864 |
| BbvI | GCAGC | 2 cut(s) | 153, 156 |
| BccI | CCATC | 7 cut(s) | 494, 535, 582, 696, 711, 768, 927 |
| BceAI | ACGGC | 1 cut(s) | 546 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 666, 700 |
| BciT130I | CCWGG | 2 cut(s) | 333, 384 |
| BciVI | GTATCC | 1 cut(s) | 666 |
| BcoDI | GTCTC | 1 cut(s) | 837 |
| BfaI | CTAG | 3 cut(s) | 119, 530, 952 |
| BfmI | CTRYAG | 1 cut(s) | 233 |
| BfuAI | ACCTGC | 3 cut(s) | 621, 641, 688 |
| BfuI | GTATCC | 1 cut(s) | 666 |
| BisI | GCNGC | 4 cut(s) | 79, 142, 145, 944 |
| BlsI | GCNGC | 4 cut(s) | 80, 143, 146, 945 |
| Bme1390I | CCNGG | 2 cut(s) | 333, 384 |
| Bme18I | GGWCC | 3 cut(s) | 122, 700, 872 |
| BmeT110I | CYCGRG | 1 cut(s) | 366 |
| BmgBI | CACGTC | 1 cut(s) | 802 |
| BmgT120I | GGNCC | 5 cut(s) | 122, 533, 700, 872, 916 |
| BmiI | GGNNCC | 2 cut(s) | 711, 874 |
| BmrFI | CCNGG | 2 cut(s) | 333, 384 |
| BmsI | GCATC | 1 cut(s) | 524 |
| Bpu10I | CCTNAGC | 1 cut(s) | 864 |
| BpuEI | CTTGAG | 1 cut(s) | 264 |
| BsaJI | CCNNGG | 4 cut(s) | 125, 161, 383, 536 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 349, 541, 589, 869 |
| Bse1I | ACTGG | 2 cut(s) | 174, 661 |
| BseBI | CCWGG | 2 cut(s) | 333, 384 |
| BseDI | CCNNGG | 4 cut(s) | 125, 161, 383, 536 |
| BseGI | GGATG | 4 cut(s) | 157, 515, 546, 750 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 349, 541, 589, 869 |
| BseMII | CTCAG | 2 cut(s) | 101, 878 |
| BseNI | ACTGG | 2 cut(s) | 174, 661 |
| BseRI | GAGGAG | 2 cut(s) | 558, 846 |
| BseXI | GCAGC | 2 cut(s) | 153, 156 |
| Bsh1236I | CGCG | 2 cut(s) | 47, 265 |
| BshFI | GGCC | 4 cut(s) | 166, 534, 753, 918 |
| BshNI | GGYRCC | 1 cut(s) | 709 |
| BsiHKAI | GWGCWC | 1 cut(s) | 280 |
| BsiHKCI | CYCGRG | 1 cut(s) | 366 |
| BslFI | GGGAC | 3 cut(s) | 10, 301, 858 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 349, 541, 589, 869 |
| BsmAI | GTCTC | 1 cut(s) | 837 |
| BsmFI | GGGAC | 3 cut(s) | 10, 301, 858 |
| BsnI | GGCC | 4 cut(s) | 166, 534, 753, 918 |
| BsoBI | CYCGRG | 1 cut(s) | 366 |
| Bsp1286I | GDGCHC | 2 cut(s) | 280, 373 |
| Bsp143I | GATC | 4 cut(s) | 270, 307, 592, 904 |
| BspACI | CCGC | 2 cut(s) | 79, 519 |
| BspANI | GGCC | 4 cut(s) | 166, 534, 753, 918 |
| BspCNI | CTCAG | 2 cut(s) | 100, 877 |
| BspFNI | CGCG | 2 cut(s) | 47, 265 |
| BspLI | GGNNCC | 2 cut(s) | 711, 874 |
| BspMI | ACCTGC | 3 cut(s) | 621, 641, 688 |
| BspPI | GGATC | 2 cut(s) | 302, 600 |
| BspQI | GCTCTTC | 1 cut(s) | 855 |
| BspT107I | GGYRCC | 1 cut(s) | 709 |
| BsrI | ACTGG | 2 cut(s) | 174, 661 |
| BssECI | CCNNGG | 4 cut(s) | 125, 161, 383, 536 |
| BssMI | GATC | 4 cut(s) | 270, 307, 592, 904 |
| BssT1I | CCWWGG | 2 cut(s) | 161, 536 |
| Bst2UI | CCWGG | 2 cut(s) | 333, 384 |
| Bst4CI | ACNGT | 1 cut(s) | 292 |
| Bst6I | CTCTTC | 2 cut(s) | 561, 855 |
| BstC8I | GCNNGC | 1 cut(s) | 755 |
| BstDEI | CTNAG | 2 cut(s) | 87, 864 |
| BstDSI | CCRYGG | 1 cut(s) | 125 |
| BstF5I | GGATG | 4 cut(s) | 157, 515, 546, 750 |
| BstFNI | CGCG | 2 cut(s) | 47, 265 |
| BstHHI | GCGC | 3 cut(s) | 9, 47, 265 |
| BstKTI | GATC | 4 cut(s) | 273, 310, 595, 907 |
| BstMAI | GTCTC | 1 cut(s) | 837 |
| BstMBI | GATC | 4 cut(s) | 270, 307, 592, 904 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 51, 333, 422 |
| BstNI | CCWGG | 2 cut(s) | 333, 384 |
| BstNSI | RCATGY | 1 cut(s) | 814 |
| BstSCI | CCNGG | 2 cut(s) | 331, 382 |
| BstSFI | CTRYAG | 1 cut(s) | 233 |
| BstUI | CGCG | 2 cut(s) | 47, 265 |
| BstV1I | GCAGC | 2 cut(s) | 153, 156 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 181 |
| BsuI | GTATCC | 1 cut(s) | 666 |
| BsuRI | GGCC | 4 cut(s) | 166, 534, 753, 918 |
| BtgI | CCRYGG | 1 cut(s) | 125 |
| BtrI | CACGTC | 1 cut(s) | 802 |
| BtsCI | GGATG | 4 cut(s) | 157, 515, 546, 750 |
| BtsIMutI | CAGTG | 4 cut(s) | 167, 496, 837, 900 |
| BveI | ACCTGC | 3 cut(s) | 621, 641, 688 |
| Cac8I | GCNNGC | 1 cut(s) | 755 |
| CfoI | GCGC | 3 cut(s) | 9, 47, 265 |
| Cfr13I | GGNCC | 5 cut(s) | 122, 533, 700, 872, 916 |
| CseI | GACGC | 1 cut(s) | 36 |
| Csp6I | GTAC | 1 cut(s) | 498 |
| CviQI | GTAC | 1 cut(s) | 498 |
| DdeI | CTNAG | 2 cut(s) | 87, 864 |
| DpnI | GATC | 4 cut(s) | 272, 309, 594, 906 |
| DpnII | GATC | 4 cut(s) | 270, 307, 592, 904 |
| EaeI | YGGCCR | 2 cut(s) | 164, 751 |
| Eam1104I | CTCTTC | 2 cut(s) | 561, 855 |
| EarI | CTCTTC | 2 cut(s) | 561, 855 |
| Eco130I | CCWWGG | 2 cut(s) | 161, 536 |
| Eco24I | GRGCYC | 1 cut(s) | 373 |
| Eco47I | GGWCC | 3 cut(s) | 122, 700, 872 |
| Eco57I | CTGAAG | 1 cut(s) | 273 |
| Eco88I | CYCGRG | 1 cut(s) | 366 |
| EcoO109I | RGGNCCY | 1 cut(s) | 533 |
| EcoRII | CCWGG | 2 cut(s) | 331, 382 |
| EcoT14I | CCWWGG | 2 cut(s) | 161, 536 |
| EcoT22I | ATGCAT | 1 cut(s) | 517 |
| EcoT38I | GRGCYC | 1 cut(s) | 373 |
| ErhI | CCWWGG | 2 cut(s) | 161, 536 |
| FaqI | GGGAC | 3 cut(s) | 10, 301, 858 |
| Fnu4HI | GCNGC | 4 cut(s) | 79, 142, 145, 944 |
| FokI | GGATG | 4 cut(s) | 144, 502, 553, 757 |
| FriOI | GRGCYC | 1 cut(s) | 373 |
| Fsp4HI | GCNGC | 4 cut(s) | 79, 142, 145, 944 |
| FspBI | CTAG | 3 cut(s) | 119, 530, 952 |
| GlaI | GCGC | 3 cut(s) | 8, 46, 264 |
| GluI | GCNGC | 4 cut(s) | 79, 142, 145, 944 |
| HaeIII | GGCC | 4 cut(s) | 166, 534, 753, 918 |
| HgaI | GACGC | 1 cut(s) | 36 |
| HhaI | GCGC | 3 cut(s) | 9, 47, 265 |
| Hin6I | GCGC | 3 cut(s) | 7, 45, 263 |
| HinP1I | GCGC | 3 cut(s) | 7, 45, 263 |
| HinfI | GANTC | 4 cut(s) | 217, 223, 362, 678 |
| HphI | GGTGA | 4 cut(s) | 4, 572, 775, 786 |
| Hpy188I | TCNGA | 7 cut(s) | 90, 222, 434, 451, 506, 669, 928 |
| Hpy188III | TCNNGA | 4 cut(s) | 366, 572, 608, 769 |
| Hpy99I | CGWCG | 1 cut(s) | 52 |
| HpyAV | CCTTC | 2 cut(s) | 38, 330 |
| HpyCH4III | ACNGT | 1 cut(s) | 292 |
| HpyCH4IV | ACGT | 2 cut(s) | 643, 801 |
| HpyCH4V | TGCA | 2 cut(s) | 515, 943 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 51, 333, 422 |
| HpyF3I | CTNAG | 2 cut(s) | 87, 864 |
| HpySE526I | ACGT | 2 cut(s) | 643, 801 |
| HspAI | GCGC | 3 cut(s) | 7, 45, 263 |
| Kzo9I | GATC | 4 cut(s) | 270, 307, 592, 904 |
| LguI | GCTCTTC | 1 cut(s) | 855 |
| Lsp1109I | GCAGC | 2 cut(s) | 153, 156 |
| LweI | GCATC | 1 cut(s) | 524 |
| MaeI | CTAG | 3 cut(s) | 119, 530, 952 |
| MaeII | ACGT | 2 cut(s) | 643, 801 |
| MaeIII | GTNAC | 1 cut(s) | 242 |
| MalI | GATC | 4 cut(s) | 272, 309, 594, 906 |
| MboI | GATC | 4 cut(s) | 270, 307, 592, 904 |
| MboII | GAAGA | 3 cut(s) | 266, 548, 842 |
| MhlI | GDGCHC | 2 cut(s) | 280, 373 |
| MlsI | TGGCCA | 2 cut(s) | 166, 753 |
| MluCI | AATT | 3 cut(s) | 32, 739, 789 |
| MluNI | TGGCCA | 2 cut(s) | 166, 753 |
| MlyI | GAGTC | 1 cut(s) | 672 |
| Mox20I | TGGCCA | 2 cut(s) | 166, 753 |
| Mph1103I | ATGCAT | 1 cut(s) | 517 |
| MscI | TGGCCA | 2 cut(s) | 166, 753 |
| Msp20I | TGGCCA | 2 cut(s) | 166, 753 |
| MspA1I | CMGCKG | 1 cut(s) | 521 |
| MspR9I | CCNGG | 2 cut(s) | 333, 384 |
| MvaI | CCWGG | 2 cut(s) | 333, 384 |
| MvnI | CGCG | 2 cut(s) | 47, 265 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 51, 333, 422 |
| NdeII | GATC | 4 cut(s) | 270, 307, 592, 904 |
| NlaIV | GGNNCC | 2 cut(s) | 711, 874 |
| NmuCI | GTSAC | 1 cut(s) | 242 |
| NsiI | ATGCAT | 1 cut(s) | 517 |
| NspI | RCATGY | 1 cut(s) | 814 |
| PaeR7I | CTCGAG | 1 cut(s) | 366 |
| PaqCI | CACCTGC | 1 cut(s) | 641 |
| PciSI | GCTCTTC | 1 cut(s) | 855 |
| PfeI | GAWTC | 3 cut(s) | 217, 223, 362 |
| PkrI | GCNGC | 4 cut(s) | 80, 143, 146, 945 |
| PleI | GAGTC | 1 cut(s) | 672 |
| PpsI | GAGTC | 1 cut(s) | 672 |
| Psp6I | CCWGG | 2 cut(s) | 331, 382 |
| PspGI | CCWGG | 2 cut(s) | 331, 382 |
| PspN4I | GGNNCC | 2 cut(s) | 711, 874 |
| PspPI | GGNCC | 5 cut(s) | 122, 533, 700, 872, 916 |
| RsaI | GTAC | 1 cut(s) | 499 |
| RsaNI | GTAC | 1 cut(s) | 498 |
| SapI | GCTCTTC | 1 cut(s) | 855 |
| SatI | GCNGC | 4 cut(s) | 79, 142, 145, 944 |
| Sau3AI | GATC | 4 cut(s) | 270, 307, 592, 904 |
| Sau96I | GGNCC | 5 cut(s) | 122, 533, 700, 872, 916 |
| SchI | GAGTC | 1 cut(s) | 672 |
| ScrFI | CCNGG | 2 cut(s) | 333, 384 |
| SduI | GDGCHC | 2 cut(s) | 280, 373 |
| SfaNI | GCATC | 1 cut(s) | 524 |
| SfcI | CTRYAG | 1 cut(s) | 233 |
| Sfr274I | CTCGAG | 1 cut(s) | 366 |
| SinI | GGWCC | 3 cut(s) | 122, 700, 872 |
| SlaI | CTCGAG | 1 cut(s) | 366 |
| SmlI | CTYRAG | 2 cut(s) | 279, 366 |
| SmoI | CTYRAG | 2 cut(s) | 279, 366 |
| Sse9I | AATT | 3 cut(s) | 32, 739, 789 |
| SsiI | CCGC | 2 cut(s) | 79, 519 |
| SspMI | CTAG | 3 cut(s) | 119, 530, 952 |
| StyD4I | CCNGG | 2 cut(s) | 331, 382 |
| StyI | CCWWGG | 2 cut(s) | 161, 536 |
| TaaI | ACNGT | 1 cut(s) | 292 |
| TaiI | ACGT | 2 cut(s) | 646, 804 |
| TaqI | TCGA | 3 cut(s) | 303, 367, 859 |
| TasI | AATT | 3 cut(s) | 32, 739, 789 |
| TatI | WGTACW | 1 cut(s) | 497 |
| TauI | GCSGC | 1 cut(s) | 81 |
| TfiI | GAWTC | 3 cut(s) | 217, 223, 362 |
| TscAI | CASTG | 4 cut(s) | 174, 496, 844, 907 |
| TseFI | GTSAC | 1 cut(s) | 242 |
| TseI | GCWGC | 3 cut(s) | 141, 144, 943 |
| Tsp45I | GTSAC | 1 cut(s) | 242 |
| TspDTI | ATGAA | 3 cut(s) | 25, 146, 215 |
| TspGWI | ACGGA | 2 cut(s) | 114, 425 |
| TspRI | CASTG | 4 cut(s) | 174, 496, 844, 907 |
| VpaK11BI | GGWCC | 3 cut(s) | 122, 700, 872 |
| XapI | RAATTY | 1 cut(s) | 789 |
| XceI | RCATGY | 1 cut(s) | 814 |
| XhoI | CTCGAG | 1 cut(s) | 366 |
| XspI | CTAG | 3 cut(s) | 119, 530, 952 |
| Zsp2I | ATGCAT | 1 cut(s) | 517 |