Rh4CG165600

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4C
OG0000073
Physical Location & Seq
Forward (+)
36488104 .. 36489333
1230 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4CG165600.1

Sequence Viewer

Length: 1230 bp
ATGGATGTTTGCAAGAATTTCAGGATCGTCAACCCGGATGAAGGCGAACTAGAAAACATCTGGTATGGTCCTTGGATGAAGAGGAAGACATTCACTATCAAGCAGCAATCTTGGCTCGATCGTCCTGCAAGGGTTATCCGGAGGAAACCCAAAACAAGGTGGTTCACGGAGCTTGGTCTTAGTTCCCCATACAAACCTCAGACTGGTACAAGTCGCAGCTCACAAAACCATAGGGCAGAAACAACGTTAGCTGATTGTGATGTGACGGTATCCTTGTTCACCGAACCAGATGATGTTGACTGCTCGACCAATTCAAATAATATGGTCGCTCCCGTGAGGGTTCAAAATCCTAGCCTTACTCCTTGTCCTGGCATGCATGATATCAGGAAAATAGAGCCAAGAATCAACCCCTTCCCCAGCCCTCATTGGATGAAGGTAGCGGTCACTACAACAAAGACACATGTGGAGTGGACAAAAAAAGTGGAACAACTCAACCCCACTTACTCACCAAGTCCTACTAGTCAAATCCTGGCCCCAAGAGCTGCGTCCACCAGGCCTAAGCCCCTAAGCCTCCCTCCTATTTCAGGCCCAAATTGCAACCCCTCAGCTGTGGAAGACGTTGGTCTTGAGGTAGTAGTGGGCCGTCCCTTTAACCCCAATCTGCCTCGCTATCCTAGTAAAGGCAAAGAACCTATCGAAACCACTTTATGCCCTTCCAACCACTCCACCCACTACCCCGATTCACACAATGATTCCTTATCCTACAAACCCACCCCATGCCCACTCAAATTCACCTCTTTAGCCCTAATACCCAAGCCAGCCAAAAGATCCTCTTCCCATGTGAACTCTGACGCAACCCCCAGACATTTCAAAACAAGGCTTATCTCTTCCCAGGAAGAGCCTTTAGATTCCGGGGAAAACTCTGACCCATTTATTCCAATTCCAGCCCCTTTTACTCCTGTTCAGATAAGGGGGAGAGGGCGAACCCGAGGCAGAGGCAGCAGCCATAGAGGTGGTAGAGTGGGATTTGGCTCCCCTAGAATCAGAAGAGGTCTCCACGAAGTTCAAAGTGACCCAGAAGGGAGAAAAGCTCGAAGCTTTCCAAGTACTAGCTTAAACTTGGGAGAATTCCAGGAGATCAGAGTGGAAATTTTAGATGATTCTGCTGGAGCTGGCGATCTTGATGTATGCACTCAACTCAATGATCTGGAGGGACAATCTCCACTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

409

Amino Acids

45.46

Weight (kDa)

9.23

Isoelectric Point (pI)

57.24

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000073)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17821 FvH4_2g04610 FvH4_2g09611 FvH4_2g13563 FvH4_3g21493 FvH4_3g32115 FvH4_3g35060 FvH4_4g00220 FvH4_4g06410 FvH4_4g10367 FvH4_4g10367 FvH4_4g10367 FvH4_5g06101 FvH4_5g08842 FvH4_5g27366 FvH4_5g31283 FvH4_6g11611 FvH4_6g23032 FvH4_7g05661 FvH4_7g06172
malus_domestica MD13G1263700.v1.1
prunus_persica Prupe.1G292300_v2.0.a1 Prupe.5G009700_v2.0.a1 Prupe.6G158100_v2.0.a1 Prupe.8G025100_v2.0.a1 Prupe.8G042600_v2.0.a1
pyrus_communis pycom02g02250 pycom02g16030 pycom05g10490 pycom09g06450 pycom09g06460 pycom13g26200 pycom16g17700
rosa_chinensis RchiOBHm_Chr2g0163321 RchiOBHm_Chr4g0401981 RchiOBHm_Chr5g0005991 RchiOBHm_Chr5g0027191 RchiOBHm_Chr6g0249771
rosa_laevigata RLG00000001040 RLG00000001764 RLG00000002239 RLG00000002240 RLG00000003259 RLG00000008993 RLG00000013847 RLG00000014178 RLG00000015576 RLG00000017269 RLG00000017355 RLG00000018127 RLG00000018602 RLG00000018615 RLG00000019904 RLG00000020044 RLG00000021849 RLG00000021850 RLG00000027965 RLG00000029266 RLG00000029820 RLG00000031112 RLG00000031915 RLG00000033568 RLG00000035013 RLG00000035677 RLG00000036568 RLG00000036628
rosa_multiflora Rmu_co8254085.1_g000001 Rmu_co8462383.1_g000001 Rmu_sc0000185.1_g000049 Rmu_sc0000251.1_g000018 Rmu_sc0000367.1_g000094 Rmu_sc0000498.1_g000023 Rmu_sc0000868.1_g000005 Rmu_sc0001521.1_g000047 Rmu_sc0001534.1_g000007 Rmu_sc0002014.1_g000012 Rmu_sc0003214.1_g000009 Rmu_sc0003573.1_g000041 Rmu_sc0003832.1_g000023 Rmu_sc0004677.1_g000015 Rmu_sc0004967.1_g000014 Rmu_sc0005426.1_g000001 Rmu_sc0005621.1_g000004 Rmu_sc0005640.1_g000009 Rmu_sc0005947.1_g000034 Rmu_sc0006889.1_g000011 Rmu_sc0007121.1_g000014 Rmu_sc0009191.1_g000017 Rmu_sc0010556.1_g000011 Rmu_sc0011396.1_g000007 Rmu_sc0019862.1_g000002 Rmu_sc0022931.1_g000003 Rmu_sc0024164.1_g000001 Rmu_ssc0000391.1_g000027
rosa_roxburghii Rroxscaffold_1G00050060 Rroxscaffold_1G00061810 Rroxscaffold_2G00109590 Rroxscaffold_2G00113810 Rroxscaffold_2G00124040 Rroxscaffold_2G00143620 Rroxscaffold_2G00154760 Rroxscaffold_4G00302820 Rroxscaffold_4G00302830 Rroxscaffold_4G00308680 Rroxscaffold_4G00310240 Rroxscaffold_4G00327890 Rroxscaffold_5G00334600 Rroxscaffold_5G00336050 Rroxscaffold_5G00346560 Rroxscaffold_5G00347860 Rroxscaffold_5G00347870 Rroxscaffold_5G00349330 Rroxscaffold_5G00351980 Rroxscaffold_6G00395280 Rroxscaffold_6G00396750 Rroxscaffold_6G00402910 Rroxscaffold_7G00174790 Rroxscaffold_7G00177570 Rroxscaffold_7G00191820 Rroxscaffold_7G00203480 Rroxscaffold_7G00204380
rosa_rugosa Rorug01G0106600 Rorug01G0106600 Rorug01G0148500.1 Rorug02G0224200 Rorug02G0225500 Rorug02G0233000 Rorug02G0630400 Rorug03G0198000 Rorug03G0232600.1 Rorug03G0240500 Rorug04G0032900 Rorug04G0073300 Rorug04G0118500 Rorug04G0149600.1 Rorug04G0205100 Rorug04G0256700 Rorug05G0020200 Rorug05G0050000 Rorug05G0247300 Rorug05G0295100 Rorug05G0337900 Rorug05G0542600 Rorug06G0034800 Rorug06G0035100 Rorug06G0220100 Rorug07G0091900 Rorug07G0271200
rosa_samantha Rh1AG118200 Rh1AG253000 Rh1AG296300 Rh1AG409000 Rh1AG410600 Rh1BG073400 Rh1BG130400 Rh1BG147300 Rh1BG163600 Rh1CG016000 Rh1DG012200 Rh1DG012300 Rh1DG078600 Rh1DG078800 Rh1DG138100 Rh1DG179200 Rh1DG192600 Rh1DG194500 Rh1DG194600 Rh1DG214300 Rh1DG245900 Rh1DG267000 Rh1DG322700 Rh1DG442700 Rh2AG282000 Rh2AG423000 Rh2AG423100 Rh2AG460700 Rh2AG466200 Rh2AG513400 Rh2AG547000 Rh2BG277800 Rh2BG281200 Rh2BG298300 Rh2BG304300 Rh2BG433500 Rh2CG276000 Rh2CG282600 Rh2CG325500 Rh2CG393000 Rh2DG319200 Rh2DG443400 Rh3AG169300 Rh3AG303600 Rh3BG195000 Rh3BG282600 Rh3BG343400 Rh3BG343500 Rh3BG344100 Rh3CG111700 Rh3CG185700 Rh3CG259100 Rh3CG293000 Rh3CG317900 Rh3CG340900 Rh3CG341000 Rh3CG341100 Rh3CG354700 Rh3CG359200 Rh3CG368100 Rh3DG179900 Rh3DG288700 Rh3DG302600 Rh3DG316000 Rh3DG324500 Rh3DG324600 Rh3DG343200 Rh3DG343300 Rh3DG362400 Rh4AG071800 Rh4BG034000 Rh4BG044300 Rh4BG044400 Rh4BG069600 Rh4BG157400 Rh4CG007000 Rh4CG030400 Rh4CG037900 Rh4CG077700 Rh4CG115000 Rh4CG162400 Rh4CG162500 Rh4CG165500 Rh4CG165600 Rh4CG172900 Rh4CG239700 Rh4DG055900 Rh4DG173200 Rh5AG354900 Rh5AG511100 Rh5BG112600 Rh5BG541000 Rh5BG541100 Rh5BG549300 Rh5CG004400 Rh5CG315000 Rh5CG563800 Rh5CG572100 Rh5DG112200 Rh5DG191300 Rh5DG407600 Rh5DG407700 Rh5DG567500 Rh6AG002600 Rh6AG051400 Rh6AG199800 Rh6AG199900 Rh6AG206200 Rh6AG391000 Rh6AG391100 Rh6BG007500 Rh6BG053400 Rh6BG225900 Rh6BG227100 Rh6BG232400 Rh6CG091100 Rh6CG125400 Rh6CG186700 Rh6CG222700 Rh6CG222800 Rh6CG235500 Rh6CG247200 Rh6CG331200 Rh6CG465100 Rh6DG183500 Rh6DG213500 Rh6DG238800 Rh6DG263700 Rh7AG211800 Rh7AG441800 Rh7BG008600 Rh7BG253000 Rh7BG390000 Rh7CG189600 Rh7CG401500 Rh7CG424200 Rh7CG428700 Rh7CG479800 Rh7CG494300 Rh7DG177000 Rh7DG218700 Rh7DG254000 Rh7DG294800 Rh7DG407200 Rh7DG448800 Rh7DG461500
rosa_wichuraiana Rw0G012180 Rw1G005270 Rw1G012310 Rw1G016890 Rw1G021700 Rw2G014380 Rw2G027690 Rw3G016400 Rw3G028230 Rw3G029320 Rw4G002060 Rw4G002100 Rw4G003980 Rw4G014140 Rw4G014770 Rw4G014780 Rw4G015760 Rw4G021230 Rw5G000520 Rw5G035610 Rw6G001680 Rw6G017890 Rw6G027440 Rw6G034130 Rw6G034170 Rw7G012430 Rw7G033870

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccIII TCCGGA 1 cut(s) 138
AciI CCGC 1 cut(s) 440
AclI AACGTT 1 cut(s) 245
AclWI GGATC 2 cut(s) 32, 822
AcsI RAATTY 4 cut(s) 16, 788, 1127, 1149
AfaI GTAC 2 cut(s) 208, 1108
AfiI CCNNNNNNNGG 6 cut(s) 41, 156, 203, 368, 584, 680
AflIII ACRYGT 1 cut(s) 460
AgsI TTSAA 4 cut(s) 315, 344, 871, 1067
AhlI ACTAGT 1 cut(s) 518
AjnI CCWGG 5 cut(s) 367, 528, 551, 891, 1131
AluBI AGCT 9 cut(s) 172, 219, 251, 542, 608, 1091, 1098, 1113, 1172
AluI AGCT 9 cut(s) 172, 219, 251, 542, 608, 1091, 1098, 1113, 1172
Alw26I GTCTC 1 cut(s) 1058
AlwI GGATC 2 cut(s) 32, 822
Ama87I CYCGRG 1 cut(s) 987
Aor13HI TCCGGA 1 cut(s) 138
AoxI GGCC 4 cut(s) 531, 554, 586, 640
ApeKI GCWGC 5 cut(s) 103, 216, 542, 999, 1002
ApoI RAATTY 4 cut(s) 16, 788, 1127, 1149
Asp700I GAANNNNTTC 1 cut(s) 89
AspS9I GGNCC 4 cut(s) 68, 532, 587, 640
AsuC2I CCSGG 2 cut(s) 35, 913
AsuHPI GGTGA 3 cut(s) 271, 498, 784
AvaI CYCGRG 1 cut(s) 987
AvaII GGWCC 1 cut(s) 68
BbsI GAAGAC 2 cut(s) 92, 621
BbvCI CCTCAGC 1 cut(s) 604
BbvI GCAGC 5 cut(s) 115, 228, 529, 1011, 1014
BceAI ACGGC 1 cut(s) 627
BcgI CGANNNNNNTGC 2 cut(s) 107, 141
BciT130I CCWGG 5 cut(s) 369, 530, 553, 893, 1133
BciVI GTATCC 1 cut(s) 280
BcnI CCSGG 2 cut(s) 35, 913
BcoDI GTCTC 1 cut(s) 1058
BcuI ACTAGT 1 cut(s) 518
BfaI CTAG 7 cut(s) 50, 351, 519, 675, 1038, 1110, 1228
BfuI GTATCC 1 cut(s) 280
BisI GCNGC 5 cut(s) 104, 217, 543, 1000, 1003
BlsI GCNGC 5 cut(s) 105, 218, 544, 1001, 1004
BmcAI AGTACT 1 cut(s) 1108
Bme1390I CCNGG 7 cut(s) 35, 369, 530, 553, 893, 913, 1133
Bme18I GGWCC 1 cut(s) 68
BmeT110I CYCGRG 1 cut(s) 987
BmgT120I GGNCC 4 cut(s) 68, 532, 587, 640
BmiI GGNNCC 2 cut(s) 534, 1033
BmrFI CCNGG 7 cut(s) 35, 369, 530, 553, 893, 913, 1133
BoxI GACNNNNGTC 1 cut(s) 621
BpiI GAAGAC 2 cut(s) 92, 621
BplI GAGNNNNNCTC 2 cut(s) 1075, 1107
BpmI CTGGAG 2 cut(s) 1188, 1229
Bpu10I CCTNAGC 3 cut(s) 558, 566, 604
BpuEI CTTGAG 1 cut(s) 647
BpuMI CCSGG 2 cut(s) 35, 913
BsaI GGTCTC 1 cut(s) 1058
BsaJI CCNNGG 4 cut(s) 71, 891, 912, 988
BsaWI WCCGGW 1 cut(s) 138
Bsc4I CCNNNNNNNGG 6 cut(s) 41, 156, 203, 368, 584, 680
Bse1I ACTGG 1 cut(s) 208
BseAI TCCGGA 1 cut(s) 138
BseBI CCWGG 5 cut(s) 369, 530, 553, 893, 1133
BseDI CCNNGG 4 cut(s) 71, 891, 912, 988
BseGI GGATG 4 cut(s) 10, 43, 81, 435
BseLI CCNNNNNNNGG 6 cut(s) 41, 156, 203, 368, 584, 680
BseMII CTCAG 2 cut(s) 212, 618
BseNI ACTGG 1 cut(s) 208
BseXI GCAGC 5 cut(s) 115, 228, 529, 1011, 1014
BseYI CCCAGC 1 cut(s) 416
Bsh1285I CGRYCG 1 cut(s) 121
BshFI GGCC 4 cut(s) 533, 556, 588, 642
BsiEI CGRYCG 1 cut(s) 121
BsiHKCI CYCGRG 1 cut(s) 987
BsiSI CCGG 3 cut(s) 35, 139, 912
BslFI GGGAC 1 cut(s) 630
BslI CCNNNNNNNGG 6 cut(s) 41, 156, 203, 368, 584, 680
BsmAI GTCTC 1 cut(s) 1058
BsmFI GGGAC 1 cut(s) 630
BsnI GGCC 4 cut(s) 533, 556, 588, 642
Bso31I GGTCTC 1 cut(s) 1058
BsoBI CYCGRG 1 cut(s) 987
Bsp13I TCCGGA 1 cut(s) 138
Bsp143I GATC 6 cut(s) 24, 118, 827, 1137, 1177, 1204
BspACI CCGC 1 cut(s) 440
BspANI GGCC 4 cut(s) 533, 556, 588, 642
BspCNI CTCAG 2 cut(s) 211, 617
BspEI TCCGGA 1 cut(s) 138
BspLI GGNNCC 2 cut(s) 534, 1033
BspPI GGATC 2 cut(s) 32, 822
BspQI GCTCTTC 1 cut(s) 891
BspTNI GGTCTC 1 cut(s) 1058
BsrI ACTGG 1 cut(s) 208
BssECI CCNNGG 4 cut(s) 71, 891, 912, 988
BssMI GATC 6 cut(s) 24, 118, 827, 1137, 1177, 1204
BssT1I CCWWGG 1 cut(s) 71
Bst2UI CCWGG 5 cut(s) 369, 530, 553, 893, 1133
Bst4CI ACNGT 1 cut(s) 268
Bst6I CTCTTC 5 cut(s) 74, 838, 891, 892, 1042
BstC8I GCNNGC 3 cut(s) 374, 819, 1174
BstDEI CTNAG 5 cut(s) 179, 198, 558, 566, 604
BstENI CCTNNNNNAGG 2 cut(s) 582, 678
BstF5I GGATG 4 cut(s) 10, 43, 81, 435
BstKTI GATC 6 cut(s) 27, 121, 830, 1140, 1180, 1207
BstMAI GTCTC 1 cut(s) 1058
BstMBI GATC 6 cut(s) 24, 118, 827, 1137, 1177, 1204
BstMCI CGRYCG 1 cut(s) 121
BstMWI GCNNNNNNNGC 4 cut(s) 112, 539, 594, 999
BstNI CCWGG 5 cut(s) 369, 530, 553, 893, 1133
BstNSI RCATGY 2 cut(s) 376, 464
BstPAI GACNNNNGTC 1 cut(s) 621
BstSCI CCNGG 7 cut(s) 33, 367, 528, 551, 891, 911, 1131
BstV1I GCAGC 5 cut(s) 115, 228, 529, 1011, 1014
BstV2I GAAGAC 2 cut(s) 92, 621
BstX2I RGATCY 1 cut(s) 827
BstXI CCANNNNNNTGG 1 cut(s) 1013
BstYI RGATCY 1 cut(s) 827
BsuI GTATCC 1 cut(s) 280
BsuRI GGCC 4 cut(s) 533, 556, 588, 642
BtsCI GGATG 4 cut(s) 10, 43, 81, 435
Cac8I GCNNGC 3 cut(s) 374, 819, 1174
Cfr13I GGNCC 4 cut(s) 68, 532, 587, 640
CseI GACGC 2 cut(s) 534, 860
Csp6I GTAC 2 cut(s) 207, 1107
CspCI CAANNNNNGTGG 2 cut(s) 462, 497
CviAII CATG 5 cut(s) 373, 377, 461, 777, 839
CviQI GTAC 2 cut(s) 207, 1107
DdeI CTNAG 5 cut(s) 179, 198, 558, 566, 604
DpnI GATC 6 cut(s) 26, 120, 829, 1139, 1179, 1206
DpnII GATC 6 cut(s) 24, 118, 827, 1137, 1177, 1204
Eam1104I CTCTTC 5 cut(s) 74, 838, 891, 892, 1042
EarI CTCTTC 5 cut(s) 74, 838, 891, 892, 1042
Eco130I CCWWGG 1 cut(s) 71
Eco147I AGGCCT 1 cut(s) 556
Eco31I GGTCTC 1 cut(s) 1058
Eco32I GATATC 1 cut(s) 382
Eco47I GGWCC 1 cut(s) 68
Eco88I CYCGRG 1 cut(s) 987
EcoNI CCTNNNNNAGG 2 cut(s) 582, 678
EcoRI GAATTC 1 cut(s) 1127
EcoRII CCWGG 5 cut(s) 367, 528, 551, 891, 1131
EcoRV GATATC 1 cut(s) 382
EcoT14I CCWWGG 1 cut(s) 71
EcoT22I ATGCAT 1 cut(s) 378
ErhI CCWWGG 1 cut(s) 71
FaeI CATG 5 cut(s) 376, 380, 464, 780, 842
FalI AAGNNNNNCTT 2 cut(s) 817, 849
FaqI GGGAC 1 cut(s) 630
FatI CATG 5 cut(s) 372, 376, 460, 776, 838
Fnu4HI GCNGC 5 cut(s) 104, 217, 543, 1000, 1003
FokI GGATG 4 cut(s) 17, 50, 88, 442
Fsp4HI GCNGC 5 cut(s) 104, 217, 543, 1000, 1003
FspBI CTAG 7 cut(s) 50, 351, 519, 675, 1038, 1110, 1228
GluI GCNGC 5 cut(s) 104, 217, 543, 1000, 1003
GsaI CCCAGC 1 cut(s) 420
GsuI CTGGAG 2 cut(s) 1188, 1229
HaeIII GGCC 4 cut(s) 533, 556, 588, 642
HapII CCGG 3 cut(s) 35, 139, 912
HgaI GACGC 2 cut(s) 534, 860
Hin1II CATG 5 cut(s) 376, 380, 464, 780, 842
HincII GTYRAC 2 cut(s) 31, 298
HindII GTYRAC 2 cut(s) 31, 298
HindIII AAGCTT 1 cut(s) 1096
HinfI GANTC 6 cut(s) 402, 740, 752, 908, 1041, 1160
HpaII CCGG 3 cut(s) 35, 139, 912
HphI GGTGA 3 cut(s) 271, 498, 784
Hpy166II GTNNAC 7 cut(s) 31, 165, 279, 298, 471, 549, 844
Hpy188I TCNGA 6 cut(s) 201, 850, 925, 966, 1046, 1142
Hpy188III TCNNGA 6 cut(s) 22, 139, 385, 626, 1181, 1208
Hpy8I GTNNAC 7 cut(s) 31, 165, 279, 298, 471, 549, 844
HpyAV CCTTC 5 cut(s) 35, 421, 427, 723, 1073
HpyCH4III ACNGT 1 cut(s) 268
HpyCH4IV ACGT 2 cut(s) 245, 618
HpyCH4V TGCA 5 cut(s) 12, 128, 376, 597, 1191
HpyF10VI GCNNNNNNNGC 4 cut(s) 112, 539, 594, 999
HpyF3I CTNAG 5 cut(s) 179, 198, 558, 566, 604
HpySE526I ACGT 2 cut(s) 245, 618
Hsp92II CATG 5 cut(s) 376, 380, 464, 780, 842
Kpn2I TCCGGA 1 cut(s) 138
Kzo9I GATC 6 cut(s) 24, 118, 827, 1137, 1177, 1204
LguI GCTCTTC 1 cut(s) 891
LmnI GCTCC 4 cut(s) 169, 334, 1037, 1169
Lsp1109I GCAGC 5 cut(s) 115, 228, 529, 1011, 1014
MaeI CTAG 7 cut(s) 50, 351, 519, 675, 1038, 1110, 1228
MaeII ACGT 2 cut(s) 245, 618
MaeIII GTNAC 3 cut(s) 262, 442, 1070
MalI GATC 6 cut(s) 26, 120, 829, 1139, 1179, 1206
MboI GATC 6 cut(s) 24, 118, 827, 1137, 1177, 1204
MboII GAAGA 7 cut(s) 91, 97, 626, 825, 879, 908, 1059
MflI RGATCY 1 cut(s) 827
MluCI AATT 7 cut(s) 16, 310, 592, 788, 939, 1127, 1149
MmeI TCCRAC 1 cut(s) 741
Mph1103I ATGCAT 1 cut(s) 378
MroI TCCGGA 1 cut(s) 138
MroXI GAANNNNTTC 1 cut(s) 89
MseI TTAA 2 cut(s) 651, 1115
MslI CAYNNNNRTG 1 cut(s) 1011
MspA1I CMGCKG 1 cut(s) 608
MspI CCGG 3 cut(s) 35, 139, 912
MspR9I CCNGG 7 cut(s) 35, 369, 530, 553, 893, 913, 1133
MvaI CCWGG 5 cut(s) 369, 530, 553, 893, 1133
MwoI GCNNNNNNNGC 4 cut(s) 112, 539, 594, 999
NciI CCSGG 2 cut(s) 35, 913
NdeII GATC 6 cut(s) 24, 118, 827, 1137, 1177, 1204
NlaIII CATG 5 cut(s) 376, 380, 464, 780, 842
NlaIV GGNNCC 2 cut(s) 534, 1033
NmuCI GTSAC 3 cut(s) 262, 442, 1070
NsiI ATGCAT 1 cut(s) 378
NspI RCATGY 2 cut(s) 376, 464
PaeI GCATGC 1 cut(s) 376
PceI AGGCCT 1 cut(s) 556
PciI ACATGT 1 cut(s) 460
PciSI GCTCTTC 1 cut(s) 891
PdmI GAANNNNTTC 1 cut(s) 89
PfeI GAWTC 6 cut(s) 402, 740, 752, 908, 1041, 1160
PfoI TCCNGGA 1 cut(s) 1131
PkrI GCNGC 5 cut(s) 105, 218, 544, 1001, 1004
Ple19I CGATCG 1 cut(s) 121
PscI ACATGT 1 cut(s) 460
PshAI GACNNNNGTC 1 cut(s) 621
Psp1406I AACGTT 1 cut(s) 245
Psp6I CCWGG 5 cut(s) 367, 528, 551, 891, 1131
PspFI CCCAGC 1 cut(s) 416
PspGI CCWGG 5 cut(s) 367, 528, 551, 891, 1131
PspN4I GGNNCC 2 cut(s) 534, 1033
PspPI GGNCC 4 cut(s) 68, 532, 587, 640
PsuI RGATCY 1 cut(s) 827
PvuI CGATCG 1 cut(s) 121
PvuII CAGCTG 1 cut(s) 608
RsaI GTAC 2 cut(s) 208, 1108
RsaNI GTAC 2 cut(s) 207, 1107
RseI CAYNNNNRTG 1 cut(s) 1011
SapI GCTCTTC 1 cut(s) 891
SaqAI TTAA 2 cut(s) 651, 1115
SatI GCNGC 5 cut(s) 104, 217, 543, 1000, 1003
Sau3AI GATC 6 cut(s) 24, 118, 827, 1137, 1177, 1204
Sau96I GGNCC 4 cut(s) 68, 532, 587, 640
ScaI AGTACT 1 cut(s) 1108
ScrFI CCNGG 7 cut(s) 35, 369, 530, 553, 893, 913, 1133
SinI GGWCC 1 cut(s) 68
SmiMI CAYNNNNRTG 1 cut(s) 1011
SmlI CTYRAG 1 cut(s) 626
SmoI CTYRAG 1 cut(s) 626
SpeI ACTAGT 1 cut(s) 518
SphI GCATGC 1 cut(s) 376
Sse9I AATT 7 cut(s) 16, 310, 592, 788, 939, 1127, 1149
SseBI AGGCCT 1 cut(s) 556
SsiI CCGC 1 cut(s) 440
SspMI CTAG 7 cut(s) 50, 351, 519, 675, 1038, 1110, 1228
StuI AGGCCT 1 cut(s) 556
StyD4I CCNGG 7 cut(s) 33, 367, 528, 551, 891, 911, 1131
StyI CCWWGG 1 cut(s) 71
TaaI ACNGT 1 cut(s) 268
TaiI ACGT 2 cut(s) 248, 621
TaqI TCGA 4 cut(s) 117, 305, 696, 1093
TasI AATT 7 cut(s) 16, 310, 592, 788, 939, 1127, 1149
TatI WGTACW 1 cut(s) 1106
TfiI GAWTC 6 cut(s) 402, 740, 752, 908, 1041, 1160
Tru1I TTAA 2 cut(s) 651, 1115
Tru9I TTAA 2 cut(s) 651, 1115
TseFI GTSAC 3 cut(s) 262, 442, 1070
TseI GCWGC 5 cut(s) 103, 216, 542, 999, 1002
Tsp45I GTSAC 3 cut(s) 262, 442, 1070
TspDTI ATGAA 3 cut(s) 54, 92, 446
TspGWI ACGGA 1 cut(s) 182
VpaK11BI GGWCC 1 cut(s) 68
XagI CCTNNNNNAGG 2 cut(s) 582, 678
XapI RAATTY 4 cut(s) 16, 788, 1127, 1149
XceI RCATGY 2 cut(s) 376, 464
XmnI GAANNNNTTC 1 cut(s) 89
XspI CTAG 7 cut(s) 50, 351, 519, 675, 1038, 1110, 1228
ZrmI AGTACT 1 cut(s) 1108
Zsp2I ATGCAT 1 cut(s) 378
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.