Domain of unknown function (DUF4283)
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| zf-CCHC_4 | PF14392 | 38 - 85 | 1e-08 | Zinc knuckle |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 32 |
| AciI | CCGC | 2 cut(s) | 32, 371 |
| AclWI | GGATC | 3 cut(s) | 49, 56, 107 |
| AcoI | YGGCCR | 2 cut(s) | 223, 232 |
| AfaI | GTAC | 1 cut(s) | 305 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 305, 406, 535 |
| AgsI | TTSAA | 1 cut(s) | 452 |
| AluBI | AGCT | 6 cut(s) | 219, 248, 264, 455, 464, 572 |
| AluI | AGCT | 6 cut(s) | 219, 248, 264, 455, 464, 572 |
| AlwI | GGATC | 3 cut(s) | 49, 56, 107 |
| AoxI | GGCC | 5 cut(s) | 223, 232, 321, 378, 409 |
| ApaI | GGGCCC | 1 cut(s) | 413 |
| ApeKI | GCWGC | 1 cut(s) | 388 |
| AspLEI | GCGC | 1 cut(s) | 32 |
| AspS9I | GGNCC | 3 cut(s) | 379, 409, 410 |
| AsuC2I | CCSGG | 1 cut(s) | 365 |
| AsuHPI | GGTGA | 1 cut(s) | 288 |
| AxyI | CCTNAGG | 1 cut(s) | 75 |
| BaeGI | GKGCMC | 1 cut(s) | 413 |
| BalI | TGGCCA | 1 cut(s) | 234 |
| BanII | GRGCYC | 2 cut(s) | 181, 413 |
| BbsI | GAAGAC | 1 cut(s) | 294 |
| BbvI | GCAGC | 1 cut(s) | 400 |
| BccI | CCATC | 4 cut(s) | 368, 404, 511, 594 |
| BclI | TGATCA | 1 cut(s) | 444 |
| BcnI | CCSGG | 1 cut(s) | 365 |
| BfaI | CTAG | 1 cut(s) | 243 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 231, 329 |
| BisI | GCNGC | 2 cut(s) | 33, 389 |
| BlsI | GCNGC | 2 cut(s) | 34, 390 |
| Bme1390I | CCNGG | 1 cut(s) | 365 |
| BmgT120I | GGNCC | 3 cut(s) | 379, 409, 410 |
| BmiI | GGNNCC | 4 cut(s) | 369, 381, 410, 411 |
| BmrFI | CCNGG | 1 cut(s) | 365 |
| BpiI | GAAGAC | 1 cut(s) | 294 |
| Bpu10I | CCTNAGC | 1 cut(s) | 384 |
| BpuMI | CCSGG | 1 cut(s) | 365 |
| Bsa29I | ATCGAT | 1 cut(s) | 114 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 543, 573 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 305, 406, 535 |
| Bse118I | RCCGGY | 1 cut(s) | 225 |
| Bse21I | CCTNAGG | 1 cut(s) | 75 |
| BseCI | ATCGAT | 1 cut(s) | 114 |
| BseGI | GGATG | 3 cut(s) | 321, 360, 396 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 305, 406, 535 |
| BseMII | CTCAG | 3 cut(s) | 66, 134, 375 |
| BseSI | GKGCMC | 1 cut(s) | 413 |
| BseXI | GCAGC | 1 cut(s) | 400 |
| Bsh1236I | CGCG | 1 cut(s) | 32 |
| BshFI | GGCC | 5 cut(s) | 225, 234, 323, 380, 411 |
| BshVI | ATCGAT | 1 cut(s) | 114 |
| BsiSI | CCGG | 3 cut(s) | 226, 365, 377 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 305, 406, 535 |
| BsmI | GAATGC | 1 cut(s) | 19 |
| BsnI | GGCC | 5 cut(s) | 225, 234, 323, 380, 411 |
| Bsp120I | GGGCCC | 1 cut(s) | 409 |
| Bsp1286I | GDGCHC | 2 cut(s) | 181, 413 |
| Bsp143I | GATC | 5 cut(s) | 41, 61, 99, 415, 444 |
| BspACI | CCGC | 2 cut(s) | 32, 371 |
| BspANI | GGCC | 5 cut(s) | 225, 234, 323, 380, 411 |
| BspCNI | CTCAG | 3 cut(s) | 67, 133, 376 |
| BspDI | ATCGAT | 1 cut(s) | 114 |
| BspFNI | CGCG | 1 cut(s) | 32 |
| BspLI | GGNNCC | 4 cut(s) | 369, 381, 410, 411 |
| BspPI | GGATC | 3 cut(s) | 49, 56, 107 |
| BspQI | GCTCTTC | 1 cut(s) | 271 |
| BsrFI | RCCGGY | 1 cut(s) | 225 |
| BssAI | RCCGGY | 1 cut(s) | 225 |
| BssMI | GATC | 5 cut(s) | 41, 61, 99, 415, 444 |
| Bst6I | CTCTTC | 2 cut(s) | 271, 298 |
| BstC8I | GCNNGC | 3 cut(s) | 227, 250, 262 |
| BstDEI | CTNAG | 4 cut(s) | 75, 95, 120, 384 |
| BstF5I | GGATG | 3 cut(s) | 321, 360, 396 |
| BstFNI | CGCG | 1 cut(s) | 32 |
| BstHHI | GCGC | 1 cut(s) | 32 |
| BstKTI | GATC | 5 cut(s) | 44, 64, 102, 418, 447 |
| BstMBI | GATC | 5 cut(s) | 41, 61, 99, 415, 444 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 176, 231, 329, 461 |
| BstSCI | CCNGG | 1 cut(s) | 363 |
| BstSLI | GKGCMC | 1 cut(s) | 413 |
| BstUI | CGCG | 1 cut(s) | 32 |
| BstV1I | GCAGC | 1 cut(s) | 400 |
| BstV2I | GAAGAC | 1 cut(s) | 294 |
| BstX2I | RGATCY | 2 cut(s) | 41, 61 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 221 |
| BstYI | RGATCY | 2 cut(s) | 41, 61 |
| Bsu15I | ATCGAT | 1 cut(s) | 114 |
| Bsu36I | CCTNAGG | 1 cut(s) | 75 |
| BsuRI | GGCC | 5 cut(s) | 225, 234, 323, 380, 411 |
| BsuTUI | ATCGAT | 1 cut(s) | 114 |
| BtgZI | GCGATG | 1 cut(s) | 37 |
| BtsCI | GGATG | 3 cut(s) | 321, 360, 396 |
| Cac8I | GCNNGC | 3 cut(s) | 227, 250, 262 |
| CfoI | GCGC | 1 cut(s) | 32 |
| Cfr10I | RCCGGY | 1 cut(s) | 225 |
| Cfr13I | GGNCC | 3 cut(s) | 379, 409, 410 |
| ClaI | ATCGAT | 1 cut(s) | 114 |
| CseI | GACGC | 1 cut(s) | 113 |
| Csp6I | GTAC | 1 cut(s) | 304 |
| CviAII | CATG | 4 cut(s) | 172, 236, 257, 595 |
| CviQI | GTAC | 1 cut(s) | 304 |
| DdeI | CTNAG | 4 cut(s) | 75, 95, 120, 384 |
| DpnI | GATC | 5 cut(s) | 43, 63, 101, 417, 446 |
| DpnII | GATC | 5 cut(s) | 41, 61, 99, 415, 444 |
| EaeI | YGGCCR | 2 cut(s) | 223, 232 |
| Eam1104I | CTCTTC | 2 cut(s) | 271, 298 |
| EarI | CTCTTC | 2 cut(s) | 271, 298 |
| EciI | GGCGGA | 1 cut(s) | 360 |
| Eco24I | GRGCYC | 2 cut(s) | 181, 413 |
| Eco81I | CCTNAGG | 1 cut(s) | 75 |
| EcoO109I | RGGNCCY | 2 cut(s) | 409, 410 |
| EcoT38I | GRGCYC | 2 cut(s) | 181, 413 |
| FaeI | CATG | 4 cut(s) | 175, 239, 260, 598 |
| FatI | CATG | 4 cut(s) | 171, 235, 256, 594 |
| FauNDI | CATATG | 1 cut(s) | 511 |
| FbaI | TGATCA | 1 cut(s) | 444 |
| Fnu4HI | GCNGC | 2 cut(s) | 33, 389 |
| FokI | GGATG | 3 cut(s) | 328, 347, 383 |
| FriOI | GRGCYC | 2 cut(s) | 181, 413 |
| Fsp4HI | GCNGC | 2 cut(s) | 33, 389 |
| FspBI | CTAG | 1 cut(s) | 243 |
| GlaI | GCGC | 1 cut(s) | 31 |
| GluI | GCNGC | 2 cut(s) | 33, 389 |
| HaeIII | GGCC | 5 cut(s) | 225, 234, 323, 380, 411 |
| HapII | CCGG | 3 cut(s) | 226, 365, 377 |
| HgaI | GACGC | 1 cut(s) | 113 |
| HhaI | GCGC | 1 cut(s) | 32 |
| Hin1II | CATG | 4 cut(s) | 175, 239, 260, 598 |
| Hin6I | GCGC | 1 cut(s) | 30 |
| HinP1I | GCGC | 1 cut(s) | 30 |
| HindIII | AAGCTT | 1 cut(s) | 453 |
| HinfI | GANTC | 3 cut(s) | 116, 184, 290 |
| HpaII | CCGG | 3 cut(s) | 226, 365, 377 |
| HphI | GGTGA | 1 cut(s) | 288 |
| Hpy188I | TCNGA | 1 cut(s) | 205 |
| HpyAV | CCTTC | 1 cut(s) | 313 |
| HpyCH4IV | ACGT | 1 cut(s) | 154 |
| HpyCH4V | TGCA | 3 cut(s) | 109, 260, 509 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 176, 231, 329, 461 |
| HpyF3I | CTNAG | 4 cut(s) | 75, 95, 120, 384 |
| HpySE526I | ACGT | 1 cut(s) | 154 |
| Hsp92II | CATG | 4 cut(s) | 175, 239, 260, 598 |
| HspAI | GCGC | 1 cut(s) | 30 |
| KroI | GCCGGC | 1 cut(s) | 225 |
| KroNI | GCCGGC | 1 cut(s) | 227 |
| Ksp22I | TGATCA | 1 cut(s) | 444 |
| Kzo9I | GATC | 5 cut(s) | 41, 61, 99, 415, 444 |
| LguI | GCTCTTC | 1 cut(s) | 271 |
| LmnI | GCTCC | 1 cut(s) | 373 |
| Lsp1109I | GCAGC | 1 cut(s) | 400 |
| MaeI | CTAG | 1 cut(s) | 243 |
| MaeII | ACGT | 1 cut(s) | 154 |
| MalI | GATC | 5 cut(s) | 43, 63, 101, 417, 446 |
| MboI | GATC | 5 cut(s) | 41, 61, 99, 415, 444 |
| MboII | GAAGA | 4 cut(s) | 71, 258, 285, 299 |
| MfeI | CAATTG | 1 cut(s) | 36 |
| MflI | RGATCY | 2 cut(s) | 41, 61 |
| MhlI | GDGCHC | 2 cut(s) | 181, 413 |
| MlsI | TGGCCA | 1 cut(s) | 234 |
| MluCI | AATT | 1 cut(s) | 36 |
| MluNI | TGGCCA | 1 cut(s) | 234 |
| MlyI | GAGTC | 1 cut(s) | 284 |
| MmeI | TCCRAC | 1 cut(s) | 175 |
| MnlI | CCTC | 7 cut(s) | 70, 80, 138, 264, 353, 384, 591 |
| Mox20I | TGGCCA | 1 cut(s) | 234 |
| MroNI | GCCGGC | 1 cut(s) | 225 |
| MscI | TGGCCA | 1 cut(s) | 234 |
| MseI | TTAA | 2 cut(s) | 440, 601 |
| MslI | CAYNNNNRTG | 1 cut(s) | 219 |
| Msp20I | TGGCCA | 1 cut(s) | 234 |
| MspI | CCGG | 3 cut(s) | 226, 365, 377 |
| MspR9I | CCNGG | 1 cut(s) | 365 |
| MunI | CAATTG | 1 cut(s) | 36 |
| Mva1269I | GAATGC | 1 cut(s) | 19 |
| MvnI | CGCG | 1 cut(s) | 32 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 176, 231, 329, 461 |
| NaeI | GCCGGC | 1 cut(s) | 227 |
| NciI | CCSGG | 1 cut(s) | 365 |
| NdeI | CATATG | 1 cut(s) | 511 |
| NdeII | GATC | 5 cut(s) | 41, 61, 99, 415, 444 |
| NgoMIV | GCCGGC | 1 cut(s) | 225 |
| NlaIII | CATG | 4 cut(s) | 175, 239, 260, 598 |
| NlaIV | GGNNCC | 4 cut(s) | 369, 381, 410, 411 |
| PciSI | GCTCTTC | 1 cut(s) | 271 |
| PctI | GAATGC | 1 cut(s) | 19 |
| PdiI | GCCGGC | 1 cut(s) | 227 |
| PfeI | GAWTC | 2 cut(s) | 116, 184 |
| PkrI | GCNGC | 2 cut(s) | 34, 390 |
| PleI | GAGTC | 1 cut(s) | 284 |
| PpsI | GAGTC | 1 cut(s) | 284 |
| PspN4I | GGNNCC | 4 cut(s) | 369, 381, 410, 411 |
| PspOMI | GGGCCC | 1 cut(s) | 409 |
| PspPI | GGNCC | 3 cut(s) | 379, 409, 410 |
| PsuI | RGATCY | 2 cut(s) | 41, 61 |
| RsaI | GTAC | 1 cut(s) | 305 |
| RsaNI | GTAC | 1 cut(s) | 304 |
| RseI | CAYNNNNRTG | 1 cut(s) | 219 |
| SapI | GCTCTTC | 1 cut(s) | 271 |
| SaqAI | TTAA | 2 cut(s) | 440, 601 |
| SatI | GCNGC | 2 cut(s) | 33, 389 |
| Sau3AI | GATC | 5 cut(s) | 41, 61, 99, 415, 444 |
| Sau96I | GGNCC | 3 cut(s) | 379, 409, 410 |
| SchI | GAGTC | 1 cut(s) | 284 |
| ScrFI | CCNGG | 1 cut(s) | 365 |
| SduI | GDGCHC | 2 cut(s) | 181, 413 |
| SfiI | GGCCNNNNNGGCC | 1 cut(s) | 231 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 219 |
| Sse9I | AATT | 1 cut(s) | 36 |
| SsiI | CCGC | 2 cut(s) | 32, 371 |
| SspI | AATATT | 1 cut(s) | 22 |
| SspMI | CTAG | 1 cut(s) | 243 |
| StyD4I | CCNGG | 1 cut(s) | 363 |
| TaiI | ACGT | 1 cut(s) | 157 |
| TaqI | TCGA | 2 cut(s) | 114, 187 |
| TasI | AATT | 1 cut(s) | 36 |
| TauI | GCSGC | 1 cut(s) | 35 |
| TfiI | GAWTC | 2 cut(s) | 116, 184 |
| Tru1I | TTAA | 2 cut(s) | 440, 601 |
| Tru9I | TTAA | 2 cut(s) | 440, 601 |
| TseI | GCWGC | 1 cut(s) | 388 |
| TspDTI | ATGAA | 2 cut(s) | 332, 556 |
| TspGWI | ACGGA | 1 cut(s) | 321 |
| XspI | CTAG | 1 cut(s) | 243 |