RLG00000008993

Domain of unknown function (DUF4283)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
OG0000073
Physical Location & Seq
Forward (+)
44437526 .. 44440037
2512 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000008993

Sequence Viewer

Length: 2025 bp
ATGCTTCAGACCGGTGAAACCCACCCTGTCTTGTCAATCACCTCATCTCCGCCGTCTCCCTCCTTCCATCACCCACCCAAGTCAAATCATAGAACCCAGTTTTTCCTATCTACCCATTACTTCACACTACCAGCTGGGTCGTATCCAAATCTCAAACAGACAGCTTGCTTCATTACAACAATTTTCGCCGCGTCGCATTTACTCAAACCAACCCGGGTCATATCAACATCTCCAAATTCTCCTCACCTAGCCTTTACTTCCCCTGCAAGAGCTTGTACTTTCCGACCACCGGTCTTTATCCTACAACCCTTGTCTCACCTACCTAACGGCAACCACATACCTTCTGTCCCTTGTAACCTCATTCAAAATCCCCTAATCATCGGAAAATACACCTCTCTCACCCCTTTCGGAACCCGACCAAACATCCTATCCCGGAGTTCATCCTTTATGACTTCCATTTATTATCCCGCCTATTTATTTGCCATTTCTGGCCCGGTTACAATCACAATCACCACCAAATCTAGACACAGCCAATTCACTTCCCCAGAAAACTTATTCCATCTATCACCTTTTAAGCCCACCTTTTTGCCACTTTCCACCATGGATCCCGACCAAAATGCACATCCAGATCTGGGAAACCCAAATCCTGAGGACCTTGTCCTGGATCTGAACCAGGTTGACCTTCAAGCCGATCAACCCTTAACTCTCCTTAGCTTCCTCTTAGCTGACAAATTCCTCAATGTGGCTGCTATTATCAGGATCCTCACTCGGGCTTGGGCTGACTTTGGGGAGGTCTACATTGAAGCTATCCGTGATCATCGGACTTTTACTATCACCACTATAGAGGGGGAAACTAGATGGCAGATCCTAGACAAAGGTCCTTGGTCGGTCATGGGTCACACCATCAGTATAAACACTTGGCCTCTTGATGCTAGACTCGAGGATGTCCCGGTTCACCTCCTCGCTATTTGGATCCAGGCTCACGGCCTACCTCAGGGCCAAATGACTCAGGAAAATGCTCAACTTCTTGGGGCGGTTGCTGGGGAGATCCACCCTCCCCGACCTCATCCCACAATTGGTGATGCCTCTCCCTCAACCAGATCCCGAGACAAAGGAAAAGCGAAGATTTTTTGTGAACCTGAACCCATTGTGGATGCCATCCCTGATGCCAATTTAAGTTTGGCCAACAGACCGGGTCCAAATCTATACCCCACTTTGGGCCTATCAGGTGAACTCAACATGGGTCTTACCCAATTCATCTTTGATCATTCCATTAATGATTTTGTTCCACTTCCCCCACCTGTTTACCCTTTTCATCTCAATCAAATCTATAATCCAACTCAGACCCAAGCTGGACCGATCCATCTAACTCCACCTTCAAGAGTCCATACTCAACCCACTGAATCTCTACAGGATCTCCTACCGTCAAGTCTAGATCTTCACCCCACTATCCAATCCAACACATTTCCTCACACAGCTCCATCATCTCACATCACCACTTCTACCACTCCATCATCTGACAACACCATCTCTGGCATCGCAAATTTCCTCGACCAACTTCGCTTCAAGCGATTGGCCGATGACACTCCGCATGATTCTGAGCGGAAAGGAAAGAAAAAGAAATTGGGTTCTTCCTCTTCTACTGATTCGGGCCTGTCTCTGGCCCCATCTGGCAACCTTGAGCTTACCTGTTCCTTTCCTTCTGGCCCCCTTTCCTTTGCTGACGGCCATCCTACCACCAACCCACCTGCCATTACTTACAGTAGAATCCGAGGAAGGGGTAGGGGCTGTGCTACCAGGGGAAGAGGTCGTGGTCGCCGGACAAATCTTAATGCTACTCAAGCACCTGATATCCAAAGAGATGCTCTTCTGAGGGAAACTCTGGCCACCACTGAAGGTTTATGTGCGGTCCAACTCATCTTAGCTGAAAACTCTCAAGCTCCTTTGGACCCAAACCGACCAAGTGCTTACTCCATCACTTACAATTCACCCTTCAATCTTAGTCTTGGATACTCTTCCAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 zf-CCHC_4 zf-RING_2

Protein Analysis

675

Amino Acids

73.72

Weight (kDa)

7.42

Isoelectric Point (pI)

45.74

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000073)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17821 FvH4_2g04610 FvH4_2g09611 FvH4_2g13563 FvH4_3g21493 FvH4_3g32115 FvH4_3g35060 FvH4_4g00220 FvH4_4g06410 FvH4_4g10367 FvH4_4g10367 FvH4_4g10367 FvH4_5g06101 FvH4_5g08842 FvH4_5g27366 FvH4_5g31283 FvH4_6g11611 FvH4_6g23032 FvH4_7g05661 FvH4_7g06172
malus_domestica MD13G1263700.v1.1
prunus_persica Prupe.1G292300_v2.0.a1 Prupe.5G009700_v2.0.a1 Prupe.6G158100_v2.0.a1 Prupe.8G025100_v2.0.a1 Prupe.8G042600_v2.0.a1
pyrus_communis pycom02g02250 pycom02g16030 pycom05g10490 pycom09g06450 pycom09g06460 pycom13g26200 pycom16g17700
rosa_chinensis RchiOBHm_Chr2g0163321 RchiOBHm_Chr4g0401981 RchiOBHm_Chr5g0005991 RchiOBHm_Chr5g0027191 RchiOBHm_Chr6g0249771
rosa_laevigata RLG00000001040 RLG00000001764 RLG00000002239 RLG00000002240 RLG00000003259 RLG00000008993 RLG00000013847 RLG00000014178 RLG00000015576 RLG00000017269 RLG00000017355 RLG00000018127 RLG00000018602 RLG00000018615 RLG00000019904 RLG00000020044 RLG00000021849 RLG00000021850 RLG00000027965 RLG00000029266 RLG00000029820 RLG00000031112 RLG00000031915 RLG00000033568 RLG00000035013 RLG00000035677 RLG00000036568 RLG00000036628
rosa_multiflora Rmu_co8254085.1_g000001 Rmu_co8462383.1_g000001 Rmu_sc0000185.1_g000049 Rmu_sc0000251.1_g000018 Rmu_sc0000367.1_g000094 Rmu_sc0000498.1_g000023 Rmu_sc0000868.1_g000005 Rmu_sc0001521.1_g000047 Rmu_sc0001534.1_g000007 Rmu_sc0002014.1_g000012 Rmu_sc0003214.1_g000009 Rmu_sc0003573.1_g000041 Rmu_sc0003832.1_g000023 Rmu_sc0004677.1_g000015 Rmu_sc0004967.1_g000014 Rmu_sc0005426.1_g000001 Rmu_sc0005621.1_g000004 Rmu_sc0005640.1_g000009 Rmu_sc0005947.1_g000034 Rmu_sc0006889.1_g000011 Rmu_sc0007121.1_g000014 Rmu_sc0009191.1_g000017 Rmu_sc0010556.1_g000011 Rmu_sc0011396.1_g000007 Rmu_sc0019862.1_g000002 Rmu_sc0022931.1_g000003 Rmu_sc0024164.1_g000001 Rmu_ssc0000391.1_g000027
rosa_roxburghii Rroxscaffold_1G00050060 Rroxscaffold_1G00061810 Rroxscaffold_2G00109590 Rroxscaffold_2G00113810 Rroxscaffold_2G00124040 Rroxscaffold_2G00143620 Rroxscaffold_2G00154760 Rroxscaffold_4G00302820 Rroxscaffold_4G00302830 Rroxscaffold_4G00308680 Rroxscaffold_4G00310240 Rroxscaffold_4G00327890 Rroxscaffold_5G00334600 Rroxscaffold_5G00336050 Rroxscaffold_5G00346560 Rroxscaffold_5G00347860 Rroxscaffold_5G00347870 Rroxscaffold_5G00349330 Rroxscaffold_5G00351980 Rroxscaffold_6G00395280 Rroxscaffold_6G00396750 Rroxscaffold_6G00402910 Rroxscaffold_7G00174790 Rroxscaffold_7G00177570 Rroxscaffold_7G00191820 Rroxscaffold_7G00203480 Rroxscaffold_7G00204380
rosa_rugosa Rorug01G0106600 Rorug01G0106600 Rorug01G0148500.1 Rorug02G0224200 Rorug02G0225500 Rorug02G0233000 Rorug02G0630400 Rorug03G0198000 Rorug03G0232600.1 Rorug03G0240500 Rorug04G0032900 Rorug04G0073300 Rorug04G0118500 Rorug04G0149600.1 Rorug04G0205100 Rorug04G0256700 Rorug05G0020200 Rorug05G0050000 Rorug05G0247300 Rorug05G0295100 Rorug05G0337900 Rorug05G0542600 Rorug06G0034800 Rorug06G0035100 Rorug06G0220100 Rorug07G0091900 Rorug07G0271200
rosa_samantha Rh1AG118200 Rh1AG253000 Rh1AG296300 Rh1AG409000 Rh1AG410600 Rh1BG073400 Rh1BG130400 Rh1BG147300 Rh1BG163600 Rh1CG016000 Rh1DG012200 Rh1DG012300 Rh1DG078600 Rh1DG078800 Rh1DG138100 Rh1DG179200 Rh1DG192600 Rh1DG194500 Rh1DG194600 Rh1DG214300 Rh1DG245900 Rh1DG267000 Rh1DG322700 Rh1DG442700 Rh2AG282000 Rh2AG423000 Rh2AG423100 Rh2AG460700 Rh2AG466200 Rh2AG513400 Rh2AG547000 Rh2BG277800 Rh2BG281200 Rh2BG298300 Rh2BG304300 Rh2BG433500 Rh2CG276000 Rh2CG282600 Rh2CG325500 Rh2CG393000 Rh2DG319200 Rh2DG443400 Rh3AG169300 Rh3AG303600 Rh3BG195000 Rh3BG282600 Rh3BG343400 Rh3BG343500 Rh3BG344100 Rh3CG111700 Rh3CG185700 Rh3CG259100 Rh3CG293000 Rh3CG317900 Rh3CG340900 Rh3CG341000 Rh3CG341100 Rh3CG354700 Rh3CG359200 Rh3CG368100 Rh3DG179900 Rh3DG288700 Rh3DG302600 Rh3DG316000 Rh3DG324500 Rh3DG324600 Rh3DG343200 Rh3DG343300 Rh3DG362400 Rh4AG071800 Rh4BG034000 Rh4BG044300 Rh4BG044400 Rh4BG069600 Rh4BG157400 Rh4CG007000 Rh4CG030400 Rh4CG037900 Rh4CG077700 Rh4CG115000 Rh4CG162400 Rh4CG162500 Rh4CG165500 Rh4CG165600 Rh4CG172900 Rh4CG239700 Rh4DG055900 Rh4DG173200 Rh5AG354900 Rh5AG511100 Rh5BG112600 Rh5BG541000 Rh5BG541100 Rh5BG549300 Rh5CG004400 Rh5CG315000 Rh5CG563800 Rh5CG572100 Rh5DG112200 Rh5DG191300 Rh5DG407600 Rh5DG407700 Rh5DG567500 Rh6AG002600 Rh6AG051400 Rh6AG199800 Rh6AG199900 Rh6AG206200 Rh6AG391000 Rh6AG391100 Rh6BG007500 Rh6BG053400 Rh6BG225900 Rh6BG227100 Rh6BG232400 Rh6CG091100 Rh6CG125400 Rh6CG186700 Rh6CG222700 Rh6CG222800 Rh6CG235500 Rh6CG247200 Rh6CG331200 Rh6CG465100 Rh6DG183500 Rh6DG213500 Rh6DG238800 Rh6DG263700 Rh7AG211800 Rh7AG441800 Rh7BG008600 Rh7BG253000 Rh7BG390000 Rh7CG189600 Rh7CG401500 Rh7CG424200 Rh7CG428700 Rh7CG479800 Rh7CG494300 Rh7DG177000 Rh7DG218700 Rh7DG254000 Rh7DG294800 Rh7DG407200 Rh7DG448800 Rh7DG461500
rosa_wichuraiana Rw0G012180 Rw1G005270 Rw1G012310 Rw1G016890 Rw1G021700 Rw2G014380 Rw2G027690 Rw3G016400 Rw3G028230 Rw3G029320 Rw4G002060 Rw4G002100 Rw4G003980 Rw4G014140 Rw4G014770 Rw4G014780 Rw4G015760 Rw4G021230 Rw5G000520 Rw5G035610 Rw6G001680 Rw6G017890 Rw6G027440 Rw6G034130 Rw6G034170 Rw7G012430 Rw7G033870

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1756
Acc36I ACCTGC 1 cut(s) 1756
AccBSI CCGCTC 1 cut(s) 1603
AccI GTMKAC 1 cut(s) 795
AccII CGCG 1 cut(s) 191
AciI CCGC 7 cut(s) 50, 189, 468, 1034, 1589, 1603, 1907
AcoI YGGCCR 4 cut(s) 1182, 1575, 1726, 1884
AcsI RAATTY 3 cut(s) 235, 731, 1543
AcuI CTGAAG 1 cut(s) 1914
AfaI GTAC 1 cut(s) 277
AgeI ACCGGT 2 cut(s) 11, 289
AgsI TTSAA 6 cut(s) 365, 686, 803, 1380, 1567, 1996
AhdI GACNNNNNGTC 1 cut(s) 290
AjnI CCWGG 4 cut(s) 660, 672, 975, 1796
AjuI GAANNNNNNNTTGG 2 cut(s) 1607, 1639
Alw26I GTCTC 4 cut(s) 60, 318, 1101, 1662
Ama87I CYCGRG 4 cut(s) 213, 768, 938, 1104
ApeKI GCWGC 1 cut(s) 746
ApoI RAATTY 3 cut(s) 235, 731, 1543
AseI ATTAAT 1 cut(s) 1275
AsiGI ACCGGT 2 cut(s) 11, 289
AsuC2I CCSGG 6 cut(s) 214, 215, 433, 494, 950, 1194
AvaI CYCGRG 4 cut(s) 213, 768, 938, 1104
AvaII GGWCC 6 cut(s) 652, 878, 1196, 1355, 1909, 1948
AxyI CCTNAGG 2 cut(s) 648, 993
BalI TGGCCA 2 cut(s) 1184, 1886
BamHI GGATCC 3 cut(s) 604, 759, 972
BbvI GCAGC 1 cut(s) 733
BceAI ACGGC 4 cut(s) 37, 343, 1000, 1741
BcgI CGANNNNNNTGC 2 cut(s) 599, 633
BciT130I CCWGG 4 cut(s) 662, 674, 977, 1798
BciVI GTATCC 2 cut(s) 153, 2003
BclI TGATCA 2 cut(s) 814, 1264
BcnI CCSGG 6 cut(s) 214, 215, 433, 494, 950, 1194
BcoDI GTCTC 4 cut(s) 60, 318, 1101, 1662
BfaI CTAG 6 cut(s) 248, 522, 855, 869, 933, 1433
BfmI CTRYAG 2 cut(s) 840, 1409
BfuAI ACCTGC 1 cut(s) 1756
BfuI GTATCC 2 cut(s) 153, 2003
BglII AGATCT 2 cut(s) 628, 1435
BisI GCNGC 2 cut(s) 189, 747
BlsI GCNGC 2 cut(s) 190, 748
Bme18I GGWCC 6 cut(s) 652, 878, 1196, 1355, 1909, 1948
BmeRI GACNNNNNGTC 1 cut(s) 290
BmeT110I CYCGRG 4 cut(s) 213, 768, 938, 1104
BmiI GGNNCC 8 cut(s) 412, 606, 761, 974, 1197, 1665, 1708, 1950
BmrI ACTGGG 1 cut(s) 91
BmsI GCATC 6 cut(s) 919, 1072, 1144, 1156, 1545, 1852
BmuI ACTGGG 1 cut(s) 91
BoxI GACNNNNGTC 1 cut(s) 876
BplI GAGNNNNNCTC 2 cut(s) 1864, 1896
Bpu10I CCTNAGC 1 cut(s) 710
BpuEI CTTGAG 3 cut(s) 1700, 1824, 1920
BpuMI CCSGG 6 cut(s) 214, 215, 433, 494, 950, 1194
BsaJI CCNNGG 5 cut(s) 213, 600, 881, 1771, 1797
BsaWI WCCGGW 2 cut(s) 11, 289
BsaXI ACNNNNNCTCC 4 cut(s) 31, 61, 1401, 1431
Bse118I RCCGGY 2 cut(s) 11, 289
Bse1I ACTGG 1 cut(s) 97
Bse21I CCTNAGG 2 cut(s) 648, 993
BseBI CCWGG 4 cut(s) 662, 674, 977, 1798
BseDI CCNNGG 5 cut(s) 213, 600, 881, 1771, 1797
BseGI GGATG 8 cut(s) 423, 440, 622, 949, 1066, 1158, 1159, 1729
BseMII CTCAG 6 cut(s) 639, 1007, 1022, 1355, 1590, 1862
BseNI ACTGG 1 cut(s) 97
BseRI GAGGAG 2 cut(s) 231, 950
BseXI GCAGC 1 cut(s) 733
BseYI CCCAGC 2 cut(s) 134, 1040
Bsh1236I CGCG 1 cut(s) 191
BshTI ACCGGT 2 cut(s) 11, 289
BsiHKCI CYCGRG 4 cut(s) 213, 768, 938, 1104
BsiSI CCGG 8 cut(s) 12, 214, 290, 433, 494, 950, 1193, 1819
BslFI GGGAC 2 cut(s) 332, 932
BsmAI GTCTC 4 cut(s) 60, 318, 1101, 1662
BsmBI CGTCTC 1 cut(s) 60
BsmFI GGGAC 2 cut(s) 332, 932
BsoBI CYCGRG 4 cut(s) 213, 768, 938, 1104
Bsp19I CCATGG 1 cut(s) 600
BspACI CCGC 7 cut(s) 50, 189, 468, 1034, 1589, 1603, 1907
BspCNI CTCAG 6 cut(s) 640, 1006, 1021, 1354, 1591, 1863
BspFNI CGCG 1 cut(s) 191
BspLI GGNNCC 8 cut(s) 412, 606, 761, 974, 1197, 1665, 1708, 1950
BspMI ACCTGC 1 cut(s) 1756
BspQI GCTCTTC 1 cut(s) 1872
BsrBI CCGCTC 1 cut(s) 1603
BsrFI RCCGGY 2 cut(s) 11, 289
BsrI ACTGG 1 cut(s) 97
BssAI RCCGGY 2 cut(s) 11, 289
BssECI CCNNGG 5 cut(s) 213, 600, 881, 1771, 1797
BssT1I CCWWGG 2 cut(s) 600, 881
Bst2UI CCWGG 4 cut(s) 662, 674, 977, 1798
Bst4CI ACNGT 2 cut(s) 1425, 1763
Bst6I CTCTTC 4 cut(s) 1642, 1798, 1872, 2020
BstC8I GCNNGC 1 cut(s) 166
BstDSI CCRYGG 1 cut(s) 600
BstENI CCTNNNNNAGG 1 cut(s) 992
BstF5I GGATG 8 cut(s) 423, 440, 622, 949, 1066, 1158, 1159, 1729
BstFNI CGCG 1 cut(s) 191
BstMAI GTCTC 4 cut(s) 60, 318, 1101, 1662
BstMWI GCNNNNNNNGC 1 cut(s) 1841
BstNI CCWGG 4 cut(s) 662, 674, 977, 1798
BstPAI GACNNNNGTC 1 cut(s) 876
BstSFI CTRYAG 2 cut(s) 840, 1409
BstUI CGCG 1 cut(s) 191
BstV1I GCAGC 1 cut(s) 733
Bsu36I CCTNAGG 2 cut(s) 648, 993
BsuI GTATCC 2 cut(s) 153, 2003
BtgI CCRYGG 1 cut(s) 600
BtgZI GCGATG 1 cut(s) 1522
BtsCI GGATG 8 cut(s) 423, 440, 622, 949, 1066, 1158, 1159, 1729
BtsIMutI CAGTG 2 cut(s) 1398, 1890
BveI ACCTGC 1 cut(s) 1756
Cac8I GCNNGC 1 cut(s) 166
Cfr10I RCCGGY 2 cut(s) 11, 289
Cfr9I CCCGGG 1 cut(s) 213
CseI GACGC 1 cut(s) 180
CsiI ACCWGGT 1 cut(s) 672
Csp6I GTAC 1 cut(s) 276
CspAI ACCGGT 2 cut(s) 11, 289
CviAII CATG 4 cut(s) 601, 892, 1240, 1592
CviQI GTAC 1 cut(s) 276
DriI GACNNNNNGTC 1 cut(s) 290
EaeI YGGCCR 4 cut(s) 1182, 1575, 1726, 1884
Eam1104I CTCTTC 4 cut(s) 1642, 1798, 1872, 2020
Eam1105I GACNNNNNGTC 1 cut(s) 290
EarI CTCTTC 4 cut(s) 1642, 1798, 1872, 2020
EciI GGCGGA 1 cut(s) 39
Eco130I CCWWGG 2 cut(s) 600, 881
Eco32I GATATC 1 cut(s) 1852
Eco47I GGWCC 6 cut(s) 652, 878, 1196, 1355, 1909, 1948
Eco57I CTGAAG 1 cut(s) 1914
Eco81I CCTNAGG 2 cut(s) 648, 993
Eco88I CYCGRG 4 cut(s) 213, 768, 938, 1104
EcoNI CCTNNNNNAGG 1 cut(s) 992
EcoO109I RGGNCCY 2 cut(s) 652, 878
EcoRII CCWGG 4 cut(s) 660, 672, 975, 1796
EcoRV GATATC 1 cut(s) 1852
EcoT14I CCWWGG 2 cut(s) 600, 881
ErhI CCWWGG 2 cut(s) 600, 881
Esp3I CGTCTC 1 cut(s) 60
FaeI CATG 4 cut(s) 604, 895, 1243, 1595
FalI AAGNNNNNCTT 2 cut(s) 566, 598
FaqI GGGAC 2 cut(s) 332, 932
FatI CATG 4 cut(s) 600, 891, 1239, 1591
FauI CCCGC 1 cut(s) 475
FbaI TGATCA 2 cut(s) 814, 1264
FblI GTMKAC 1 cut(s) 795
Fnu4HI GCNGC 2 cut(s) 189, 747
FokI GGATG 8 cut(s) 410, 427, 609, 956, 1053, 1145, 1166, 1716
Fsp4HI GCNGC 2 cut(s) 189, 747
FspBI CTAG 6 cut(s) 248, 522, 855, 869, 933, 1433
GluI GCNGC 2 cut(s) 189, 747
GsaI CCCAGC 2 cut(s) 138, 1044
HapII CCGG 8 cut(s) 12, 214, 290, 433, 494, 950, 1193, 1819
HgaI GACGC 1 cut(s) 180
Hin1II CATG 4 cut(s) 604, 895, 1243, 1595
HincII GTYRAC 1 cut(s) 679
HindII GTYRAC 1 cut(s) 679
HinfI GANTC 7 cut(s) 936, 1006, 1383, 1403, 1595, 1646, 1767
HpaII CCGG 8 cut(s) 12, 214, 290, 433, 494, 950, 1193, 1819
Hpy166II GTNNAC 6 cut(s) 679, 796, 955, 1136, 1232, 1306
Hpy8I GTNNAC 6 cut(s) 679, 796, 955, 1136, 1232, 1306
Hpy99I CGWCG 1 cut(s) 196
HpyAV CCTTC 8 cut(s) 73, 351, 692, 1386, 1710, 1770, 1889, 2002
HpyCH4III ACNGT 2 cut(s) 1425, 1763
HpyCH4V TGCA 2 cut(s) 266, 620
HpyF10VI GCNNNNNNNGC 1 cut(s) 1841
Hsp92II CATG 4 cut(s) 604, 895, 1243, 1595
Ksp22I TGATCA 2 cut(s) 814, 1264
LguI GCTCTTC 1 cut(s) 1872
LmnI GCTCC 2 cut(s) 1483, 1945
Lsp1109I GCAGC 1 cut(s) 733
LweI GCATC 6 cut(s) 919, 1072, 1144, 1156, 1545, 1852
MabI ACCWGGT 1 cut(s) 672
MaeI CTAG 6 cut(s) 248, 522, 855, 869, 933, 1433
MaeIII GTNAC 3 cut(s) 353, 496, 896
MbiI CCGCTC 1 cut(s) 1603
MboII GAAGA 7 cut(s) 1135, 1430, 1623, 1629, 1815, 1859, 2007
MfeI CAATTG 1 cut(s) 1074
MlsI TGGCCA 2 cut(s) 1184, 1886
MluNI TGGCCA 2 cut(s) 1184, 1886
MlyI GAGTC 3 cut(s) 930, 1000, 1392
MmeI TCCRAC 4 cut(s) 307, 1361, 1482, 1936
Mox20I TGGCCA 2 cut(s) 1184, 1886
MscI TGGCCA 2 cut(s) 1184, 1886
MseI TTAA 6 cut(s) 573, 701, 1175, 1275, 1830, 2023
Msp20I TGGCCA 2 cut(s) 1184, 1886
MspA1I CMGCKG 1 cut(s) 134
MspI CCGG 8 cut(s) 12, 214, 290, 433, 494, 950, 1193, 1819
MunI CAATTG 1 cut(s) 1074
MvaI CCWGG 4 cut(s) 662, 674, 977, 1798
MvnI CGCG 1 cut(s) 191
MwoI GCNNNNNNNGC 1 cut(s) 1841
NciI CCSGG 6 cut(s) 214, 215, 433, 494, 950, 1194
NcoI CCATGG 1 cut(s) 600
NlaIII CATG 4 cut(s) 604, 895, 1243, 1595
NlaIV GGNNCC 8 cut(s) 412, 606, 761, 974, 1197, 1665, 1708, 1950
NmuCI GTSAC 1 cut(s) 896
PaeR7I CTCGAG 1 cut(s) 938
PaqCI CACCTGC 1 cut(s) 1756
PciSI GCTCTTC 1 cut(s) 1872
PcsI WCGNNNNNNNCGW 1 cut(s) 1567
PfeI GAWTC 4 cut(s) 1403, 1595, 1646, 1767
PflFI GACNNNGTC 2 cut(s) 656, 1194
PfoI TCCNGGA 2 cut(s) 431, 660
PinAI ACCGGT 2 cut(s) 11, 289
PkrI GCNGC 2 cut(s) 190, 748
PleI GAGTC 3 cut(s) 930, 1000, 1391
PpsI GAGTC 3 cut(s) 930, 1000, 1391
PpuMI RGGWCCY 2 cut(s) 652, 878
PshAI GACNNNNGTC 1 cut(s) 876
PshBI ATTAAT 1 cut(s) 1275
Psp5II RGGWCCY 2 cut(s) 652, 878
Psp6I CCWGG 4 cut(s) 660, 672, 975, 1796
PspFI CCCAGC 2 cut(s) 134, 1040
PspGI CCWGG 4 cut(s) 660, 672, 975, 1796
PspN4I GGNNCC 8 cut(s) 412, 606, 761, 974, 1197, 1665, 1708, 1950
PspPPI RGGWCCY 2 cut(s) 652, 878
PspXI VCTCGAGB 1 cut(s) 938
PsyI GACNNNGTC 2 cut(s) 656, 1194
PvuII CAGCTG 1 cut(s) 134
RsaI GTAC 1 cut(s) 277
RsaNI GTAC 1 cut(s) 276
SapI GCTCTTC 1 cut(s) 1872
SaqAI TTAA 6 cut(s) 573, 701, 1175, 1275, 1830, 2023
SatI GCNGC 2 cut(s) 189, 747
SchI GAGTC 3 cut(s) 930, 1000, 1392
SexAI ACCWGGT 1 cut(s) 672
SfaNI GCATC 6 cut(s) 919, 1072, 1144, 1156, 1545, 1852
SfcI CTRYAG 2 cut(s) 840, 1409
Sfr274I CTCGAG 1 cut(s) 938
SinI GGWCC 6 cut(s) 652, 878, 1196, 1355, 1909, 1948
SlaI CTCGAG 1 cut(s) 938
SmaI CCCGGG 1 cut(s) 215
SmlI CTYRAG 4 cut(s) 938, 1679, 1839, 1935
SmoI CTYRAG 4 cut(s) 938, 1679, 1839, 1935
SsiI CCGC 7 cut(s) 50, 189, 468, 1034, 1589, 1603, 1907
SspMI CTAG 6 cut(s) 248, 522, 855, 869, 933, 1433
StyI CCWWGG 2 cut(s) 600, 881
TaaI ACNGT 2 cut(s) 1425, 1763
TaqI TCGA 2 cut(s) 939, 1551
TaqII GACCGA 2 cut(s) 877, 1372
TatI WGTACW 1 cut(s) 275
TauI GCSGC 1 cut(s) 191
TfiI GAWTC 4 cut(s) 1403, 1595, 1646, 1767
Tru1I TTAA 6 cut(s) 573, 701, 1175, 1275, 1830, 2023
Tru9I TTAA 6 cut(s) 573, 701, 1175, 1275, 1830, 2023
TscAI CASTG 2 cut(s) 1405, 1897
TseFI GTSAC 1 cut(s) 896
TseI GCWGC 1 cut(s) 746
Tsp45I GTSAC 1 cut(s) 896
TspDTI ATGAA 4 cut(s) 160, 429, 1246, 1304
TspGWI ACGGA 1 cut(s) 800
TspMI CCCGGG 1 cut(s) 213
TspRI CASTG 2 cut(s) 1405, 1897
Tth111I GACNNNGTC 2 cut(s) 656, 1194
VpaK11BI GGWCC 6 cut(s) 652, 878, 1196, 1355, 1909, 1948
VspI ATTAAT 1 cut(s) 1275
XagI CCTNNNNNAGG 1 cut(s) 992
XapI RAATTY 3 cut(s) 235, 731, 1543
XbaI TCTAGA 2 cut(s) 521, 1432
XcmI CCANNNNNNNNNTGG 1 cut(s) 1177
XhoI CTCGAG 1 cut(s) 938
XmaI CCCGGG 1 cut(s) 213
XmiI GTMKAC 1 cut(s) 795
XspI CTAG 6 cut(s) 248, 522, 855, 869, 933, 1433
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.