RLG00000036568

Domain of unknown function (DUF4283)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0000073
Physical Location & Seq
Forward (+)
82035227 .. 82037091
1865 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000036568

Sequence Viewer

Length: 1728 bp
ATGAGCCCCATATCAAAGAAGCAAGTGAGAACCTCAATGTATTTAGTTACCCTTCTCCTCCATCGGCTCAAACCCACAACGTCCACCTTTCTACTATTTCTTCATCTCATCACAGCTCTACACCACTCTCCCTCCAAAATACCTTCCCCATCTTTAGCTATGGAAACTGAAAACCCTGATACCCAAGACCTGATTATCCGAATGAGAGAAAAACTCTGCCTCCGAACCTTGGACCGATCTGTTCGGCTTACAGCTGTAATATTTGCAGATAGAGTCCCTCATAAACCCACAACCATTGACATGTTAAAGAAAGCCTGGGTGTCCTTCGGCGAAGTGGGAATCACTGCCAGAGATGAGAGAGATCCCACAGATCTCCTATTTGCAGTTACTGTCCGAAATGAGGAAGCAGCCAGAGATATAATGGAAAACTCACCATGGTCAGTTAAAGGTTACTCAGTCCACATTCAACCTTGGCCTGAACACCTTGCCATTGAGGAGCTGCCCACCAACAACATTGCAGTTTGGATCCAAATGAGGGGTGTACCCCCATACATGTTCTCTGTCAGAAATGTAGAAGAGATGGTGGAGCACTTTGGTGAGTTCATCAAAATGGAAGACCCGCTTGAAAGTGGAGAAGGTACTTATTGCTTCCTCCGGGTCCGTGTCATGCTTGATGCTAGGAGGCCACTACCCACTGGTTTCACTCTTCCAAGAGATGATGGAAGTCCCTCCTGGGTTGAATTCAAATTTGAAAGGTTATCTCGATTTTGTTTCTGCTGTGGCCGTCTTGGACACATCGAAACCATCCAAACTCCTTGCCCGAATAGTGAAGAACCAAGGCCAGAGGGCACTGTCTATGGGGAGTGGATGATAACTAGTGCTTTCCGGCGACCGGGACAAGCTACCCAAGTGATCCGACCAGCGAGAAGGAGGAGAAGTGCAGGCCAAAGAATGACACCGGAAAACACCTTGGAGACCGGACAGAACCCACAAACCAAGAATTGTCAGAGGGTGTCTAGTCCAAATCATAGCCAGCTTATTACTGAGGGAAGCAACAGTGACTTGACAACATGGAATCCCTCAATAGTAGAGCCTGTGCAACACCCCTCCCTAGGCCCCTCCAACGGGCAGGAACCCGTGAATCACCAACACCTGCAGAGCTACAGTCTACCTCTCCCTAACCCACTACACCAAAATAACCGGCCAAAAAACCATTCCATCACTACTCAACATATCTCATCCAATGCACATGGGTTTGTGGGGTTAGATAGCCAAAATTTCCAAGCACCTATGTTTACCAATGTGCAAACTCCAATTACCTCTACTGGTCCCAGCAATACAACCACACCACCATACAACGGTAACATGTCAAATAATAGTCCCCCCCAAGACCTCAATCACATGGCCAATCTCACCAACTCTACGCTTGAGCGTGTGTTTTCCCCAAATGAGCCCTGTTACCTCCACCATCCAATTGAGTCAACCCATCCAAACAGCAACCCCACTACTTTCCTCCTTAAGAGATCCATGTTTGTGGAAACAAGTGAGCCTGCAACTCAAAAGAAAACCAAGACAAGTCCGAAACCCAGACGCTTTGTCAAACCTGCGAGCAAAAACAATACAAATGGTCAGCACTCAGGTTCAGGGGTTTCTCTTGCTAATGAGTCGGTTGGGGGCGATCTCCTCCAAGGCGGTGGTGGCTGGCCGACAGCCACAAGGCCCCAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 zf-CCHC_4 zf-RING_2

Protein Analysis

576

Amino Acids

64.47

Weight (kDa)

8.71

Isoelectric Point (pI)

50.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-CCHC_4 PF14392 225 - 266 1.1e-09 Zinc knuckle
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000073)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17821 FvH4_2g04610 FvH4_2g09611 FvH4_2g13563 FvH4_3g21493 FvH4_3g32115 FvH4_3g35060 FvH4_4g00220 FvH4_4g06410 FvH4_4g10367 FvH4_4g10367 FvH4_4g10367 FvH4_5g06101 FvH4_5g08842 FvH4_5g27366 FvH4_5g31283 FvH4_6g11611 FvH4_6g23032 FvH4_7g05661 FvH4_7g06172
malus_domestica MD13G1263700.v1.1
prunus_persica Prupe.1G292300_v2.0.a1 Prupe.5G009700_v2.0.a1 Prupe.6G158100_v2.0.a1 Prupe.8G025100_v2.0.a1 Prupe.8G042600_v2.0.a1
pyrus_communis pycom02g02250 pycom02g16030 pycom05g10490 pycom09g06450 pycom09g06460 pycom13g26200 pycom16g17700
rosa_chinensis RchiOBHm_Chr2g0163321 RchiOBHm_Chr4g0401981 RchiOBHm_Chr5g0005991 RchiOBHm_Chr5g0027191 RchiOBHm_Chr6g0249771
rosa_laevigata RLG00000001040 RLG00000001764 RLG00000002239 RLG00000002240 RLG00000003259 RLG00000008993 RLG00000013847 RLG00000014178 RLG00000015576 RLG00000017269 RLG00000017355 RLG00000018127 RLG00000018602 RLG00000018615 RLG00000019904 RLG00000020044 RLG00000021849 RLG00000021850 RLG00000027965 RLG00000029266 RLG00000029820 RLG00000031112 RLG00000031915 RLG00000033568 RLG00000035013 RLG00000035677 RLG00000036568 RLG00000036628
rosa_multiflora Rmu_co8254085.1_g000001 Rmu_co8462383.1_g000001 Rmu_sc0000185.1_g000049 Rmu_sc0000251.1_g000018 Rmu_sc0000367.1_g000094 Rmu_sc0000498.1_g000023 Rmu_sc0000868.1_g000005 Rmu_sc0001521.1_g000047 Rmu_sc0001534.1_g000007 Rmu_sc0002014.1_g000012 Rmu_sc0003214.1_g000009 Rmu_sc0003573.1_g000041 Rmu_sc0003832.1_g000023 Rmu_sc0004677.1_g000015 Rmu_sc0004967.1_g000014 Rmu_sc0005426.1_g000001 Rmu_sc0005621.1_g000004 Rmu_sc0005640.1_g000009 Rmu_sc0005947.1_g000034 Rmu_sc0006889.1_g000011 Rmu_sc0007121.1_g000014 Rmu_sc0009191.1_g000017 Rmu_sc0010556.1_g000011 Rmu_sc0011396.1_g000007 Rmu_sc0019862.1_g000002 Rmu_sc0022931.1_g000003 Rmu_sc0024164.1_g000001 Rmu_ssc0000391.1_g000027
rosa_roxburghii Rroxscaffold_1G00050060 Rroxscaffold_1G00061810 Rroxscaffold_2G00109590 Rroxscaffold_2G00113810 Rroxscaffold_2G00124040 Rroxscaffold_2G00143620 Rroxscaffold_2G00154760 Rroxscaffold_4G00302820 Rroxscaffold_4G00302830 Rroxscaffold_4G00308680 Rroxscaffold_4G00310240 Rroxscaffold_4G00327890 Rroxscaffold_5G00334600 Rroxscaffold_5G00336050 Rroxscaffold_5G00346560 Rroxscaffold_5G00347860 Rroxscaffold_5G00347870 Rroxscaffold_5G00349330 Rroxscaffold_5G00351980 Rroxscaffold_6G00395280 Rroxscaffold_6G00396750 Rroxscaffold_6G00402910 Rroxscaffold_7G00174790 Rroxscaffold_7G00177570 Rroxscaffold_7G00191820 Rroxscaffold_7G00203480 Rroxscaffold_7G00204380
rosa_rugosa Rorug01G0106600 Rorug01G0106600 Rorug01G0148500.1 Rorug02G0224200 Rorug02G0225500 Rorug02G0233000 Rorug02G0630400 Rorug03G0198000 Rorug03G0232600.1 Rorug03G0240500 Rorug04G0032900 Rorug04G0073300 Rorug04G0118500 Rorug04G0149600.1 Rorug04G0205100 Rorug04G0256700 Rorug05G0020200 Rorug05G0050000 Rorug05G0247300 Rorug05G0295100 Rorug05G0337900 Rorug05G0542600 Rorug06G0034800 Rorug06G0035100 Rorug06G0220100 Rorug07G0091900 Rorug07G0271200
rosa_samantha Rh1AG118200 Rh1AG253000 Rh1AG296300 Rh1AG409000 Rh1AG410600 Rh1BG073400 Rh1BG130400 Rh1BG147300 Rh1BG163600 Rh1CG016000 Rh1DG012200 Rh1DG012300 Rh1DG078600 Rh1DG078800 Rh1DG138100 Rh1DG179200 Rh1DG192600 Rh1DG194500 Rh1DG194600 Rh1DG214300 Rh1DG245900 Rh1DG267000 Rh1DG322700 Rh1DG442700 Rh2AG282000 Rh2AG423000 Rh2AG423100 Rh2AG460700 Rh2AG466200 Rh2AG513400 Rh2AG547000 Rh2BG277800 Rh2BG281200 Rh2BG298300 Rh2BG304300 Rh2BG433500 Rh2CG276000 Rh2CG282600 Rh2CG325500 Rh2CG393000 Rh2DG319200 Rh2DG443400 Rh3AG169300 Rh3AG303600 Rh3BG195000 Rh3BG282600 Rh3BG343400 Rh3BG343500 Rh3BG344100 Rh3CG111700 Rh3CG185700 Rh3CG259100 Rh3CG293000 Rh3CG317900 Rh3CG340900 Rh3CG341000 Rh3CG341100 Rh3CG354700 Rh3CG359200 Rh3CG368100 Rh3DG179900 Rh3DG288700 Rh3DG302600 Rh3DG316000 Rh3DG324500 Rh3DG324600 Rh3DG343200 Rh3DG343300 Rh3DG362400 Rh4AG071800 Rh4BG034000 Rh4BG044300 Rh4BG044400 Rh4BG069600 Rh4BG157400 Rh4CG007000 Rh4CG030400 Rh4CG037900 Rh4CG077700 Rh4CG115000 Rh4CG162400 Rh4CG162500 Rh4CG165500 Rh4CG165600 Rh4CG172900 Rh4CG239700 Rh4DG055900 Rh4DG173200 Rh5AG354900 Rh5AG511100 Rh5BG112600 Rh5BG541000 Rh5BG541100 Rh5BG549300 Rh5CG004400 Rh5CG315000 Rh5CG563800 Rh5CG572100 Rh5DG112200 Rh5DG191300 Rh5DG407600 Rh5DG407700 Rh5DG567500 Rh6AG002600 Rh6AG051400 Rh6AG199800 Rh6AG199900 Rh6AG206200 Rh6AG391000 Rh6AG391100 Rh6BG007500 Rh6BG053400 Rh6BG225900 Rh6BG227100 Rh6BG232400 Rh6CG091100 Rh6CG125400 Rh6CG186700 Rh6CG222700 Rh6CG222800 Rh6CG235500 Rh6CG247200 Rh6CG331200 Rh6CG465100 Rh6DG183500 Rh6DG213500 Rh6DG238800 Rh6DG263700 Rh7AG211800 Rh7AG441800 Rh7BG008600 Rh7BG253000 Rh7BG390000 Rh7CG189600 Rh7CG401500 Rh7CG424200 Rh7CG428700 Rh7CG479800 Rh7CG494300 Rh7DG177000 Rh7DG218700 Rh7DG254000 Rh7DG294800 Rh7DG407200 Rh7DG448800 Rh7DG461500
rosa_wichuraiana Rw0G012180 Rw1G005270 Rw1G012310 Rw1G016890 Rw1G021700 Rw2G014380 Rw2G027690 Rw3G016400 Rw3G028230 Rw3G029320 Rw4G002060 Rw4G002100 Rw4G003980 Rw4G014140 Rw4G014770 Rw4G014780 Rw4G015760 Rw4G021230 Rw5G000520 Rw5G035610 Rw6G001680 Rw6G017890 Rw6G027440 Rw6G034130 Rw6G034170 Rw7G012430 Rw7G033870

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1161
Acc36I ACCTGC 2 cut(s) 1161, 1612
AccI GTMKAC 1 cut(s) 1168
AciI CCGC 2 cut(s) 620, 1692
AclWI GGATC 5 cut(s) 356, 520, 533, 907, 1518
AcoI YGGCCR 4 cut(s) 781, 1202, 1404, 1703
AcsI RAATTY 3 cut(s) 740, 746, 1276
AfaI GTAC 2 cut(s) 543, 640
AfiI CCNNNNNNNGG 8 cut(s) 229, 400, 535, 892, 1112, 1124, 1125, 1358
AflII CTTAAG 1 cut(s) 1517
AflIII ACRYGT 3 cut(s) 300, 552, 1365
AgsI TTSAA 5 cut(s) 467, 626, 740, 745, 752
AhdI GACNNNNNGTC 1 cut(s) 1595
AhlI ACTAGT 1 cut(s) 875
AjnI CCWGG 2 cut(s) 314, 731
AjuI GAANNNNNNNTTGG 2 cut(s) 1198, 1230
AleI CACNNNNGTG 1 cut(s) 594
AluBI AGCT 7 cut(s) 116, 158, 254, 499, 902, 1036, 1161
AluI AGCT 7 cut(s) 116, 158, 254, 499, 902, 1036, 1161
Alw21I GWGCWC 1 cut(s) 591
Alw26I GTCTC 1 cut(s) 968
AlwI GGATC 5 cut(s) 356, 520, 533, 907, 1518
AlwNI CAGNNNCTG 1 cut(s) 389
ApeKI GCWGC 2 cut(s) 407, 499
ApoI RAATTY 3 cut(s) 740, 746, 1276
AspA2I CCTAGG 1 cut(s) 1111
AspS9I GGNCC 5 cut(s) 232, 658, 1115, 1328, 1719
AsuC2I CCSGG 2 cut(s) 656, 894
AsuHPI GGTGA 4 cut(s) 423, 608, 1136, 1405
AvaII GGWCC 3 cut(s) 232, 658, 1328
AvrII CCTAGG 1 cut(s) 1111
BaeGI GKGCMC 1 cut(s) 851
BalI TGGCCA 1 cut(s) 1406
BamHI GGATCC 1 cut(s) 525
BanII GRGCYC 2 cut(s) 8, 1455
BbsI GAAGAC 1 cut(s) 621
Bbv12I GWGCWC 1 cut(s) 591
BbvI GCAGC 2 cut(s) 419, 486
BccI CCATC 8 cut(s) 69, 157, 574, 713, 812, 1226, 1476, 1494
BceAI ACGGC 1 cut(s) 768
BciT130I CCWGG 2 cut(s) 316, 733
BcnI CCSGG 2 cut(s) 656, 894
BcoDI GTCTC 1 cut(s) 968
BcuI ACTAGT 1 cut(s) 875
BfaI CTAG 4 cut(s) 678, 876, 1017, 1112
BfmI CTRYAG 2 cut(s) 1154, 1162
BfrI CTTAAG 1 cut(s) 1517
BfuAI ACCTGC 2 cut(s) 1161, 1612
BglII AGATCT 1 cut(s) 370
BisI GCNGC 2 cut(s) 408, 500
BlnI CCTAGG 1 cut(s) 1111
BlsI GCNGC 2 cut(s) 409, 501
Bme1390I CCNGG 4 cut(s) 316, 656, 733, 894
Bme18I GGWCC 3 cut(s) 232, 658, 1328
BmeRI GACNNNNNGTC 1 cut(s) 1595
BmgT120I GGNCC 5 cut(s) 232, 658, 1115, 1328, 1719
BmiI GGNNCC 6 cut(s) 527, 659, 1117, 1134, 1330, 1721
BmrFI CCNGG 4 cut(s) 316, 656, 733, 894
BmsI GCATC 1 cut(s) 664
BpiI GAAGAC 1 cut(s) 621
BplI GAGNNNNNCTC 2 cut(s) 198, 230
BpuEI CTTGAG 1 cut(s) 1448
BpuMI CCSGG 2 cut(s) 656, 894
BsaI GGTCTC 1 cut(s) 968
BsaJI CCNNGG 9 cut(s) 228, 315, 434, 470, 732, 836, 969, 1111, 1687
BsaWI WCCGGW 2 cut(s) 958, 977
BsaXI ACNNNNNCTCC 6 cut(s) 116, 146, 204, 234, 922, 952
Bsc4I CCNNNNNNNGG 8 cut(s) 229, 400, 535, 892, 1112, 1124, 1125, 1358
Bse118I RCCGGY 1 cut(s) 1200
Bse1I ACTGG 2 cut(s) 700, 1330
Bse3DI GCAATG 1 cut(s) 513
BseBI CCWGG 2 cut(s) 316, 733
BseDI CCNNGG 9 cut(s) 228, 315, 434, 470, 732, 836, 969, 1111, 1687
BseGI GGATG 5 cut(s) 804, 873, 1238, 1468, 1486
BseLI CCNNNNNNNGG 8 cut(s) 229, 400, 535, 892, 1112, 1124, 1125, 1358
BseMI GCAATG 1 cut(s) 513
BseMII CTCAG 3 cut(s) 468, 1035, 1650
BseNI ACTGG 2 cut(s) 700, 1330
BseRI GAGGAG 4 cut(s) 47, 509, 946, 1673
BseSI GKGCMC 1 cut(s) 851
BseXI GCAGC 2 cut(s) 419, 486
BseYI CCCAGC 1 cut(s) 1331
BsgI GTGCAG 1 cut(s) 960
Bsh1285I CGRYCG 1 cut(s) 893
BsiEI CGRYCG 1 cut(s) 893
BsiHKAI GWGCWC 1 cut(s) 591
BsiSI CCGG 6 cut(s) 655, 886, 893, 959, 978, 1201
BslFI GGGAC 5 cut(s) 260, 711, 909, 1314, 1365
BslI CCNNNNNNNGG 8 cut(s) 229, 400, 535, 892, 1112, 1124, 1125, 1358
BsmAI GTCTC 1 cut(s) 968
BsmFI GGGAC 5 cut(s) 260, 711, 909, 1314, 1365
Bso31I GGTCTC 1 cut(s) 968
Bsp1286I GDGCHC 4 cut(s) 8, 591, 851, 1455
Bsp143I GATC 7 cut(s) 236, 361, 370, 525, 912, 1523, 1678
Bsp19I CCATGG 1 cut(s) 434
BspACI CCGC 2 cut(s) 620, 1692
BspCNI CTCAG 3 cut(s) 467, 1036, 1649
BspLI GGNNCC 6 cut(s) 527, 659, 1117, 1134, 1330, 1721
BspMAI CTGCAG 1 cut(s) 1158
BspMI ACCTGC 2 cut(s) 1161, 1612
BspPI GGATC 5 cut(s) 356, 520, 533, 907, 1518
BspTI CTTAAG 1 cut(s) 1517
BspTNI GGTCTC 1 cut(s) 968
BsrDI GCAATG 1 cut(s) 513
BsrFI RCCGGY 1 cut(s) 1200
BsrI ACTGG 2 cut(s) 700, 1330
BssAI RCCGGY 1 cut(s) 1200
BssECI CCNNGG 9 cut(s) 228, 315, 434, 470, 732, 836, 969, 1111, 1687
BssMI GATC 7 cut(s) 236, 361, 370, 525, 912, 1523, 1678
BssT1I CCWWGG 7 cut(s) 228, 434, 470, 836, 969, 1111, 1687
Bst2UI CCWGG 2 cut(s) 316, 733
Bst4CI ACNGT 5 cut(s) 391, 853, 1058, 1166, 1361
Bst6I CTCTTC 2 cut(s) 570, 711
BstAFI CTTAAG 1 cut(s) 1517
BstC8I GCNNGC 5 cut(s) 943, 1034, 1551, 1609, 1703
BstDEI CTNAG 3 cut(s) 454, 1044, 1636
BstDSI CCRYGG 1 cut(s) 434
BstF5I GGATG 5 cut(s) 804, 873, 1238, 1468, 1486
BstKTI GATC 7 cut(s) 239, 364, 373, 528, 915, 1526, 1681
BstMAI GTCTC 1 cut(s) 968
BstMBI GATC 7 cut(s) 236, 361, 370, 525, 912, 1523, 1678
BstMCI CGRYCG 1 cut(s) 893
BstMWI GCNNNNNNNGC 1 cut(s) 1698
BstNI CCWGG 2 cut(s) 316, 733
BstNSI RCATGY 3 cut(s) 304, 556, 1369
BstSCI CCNGG 4 cut(s) 314, 654, 731, 892
BstSFI CTRYAG 2 cut(s) 1154, 1162
BstSLI GKGCMC 1 cut(s) 851
BstV1I GCAGC 2 cut(s) 419, 486
BstV2I GAAGAC 1 cut(s) 621
BstX2I RGATCY 4 cut(s) 361, 370, 525, 1523
BstXI CCANNNNNNTGG 2 cut(s) 1534, 1694
BstYI RGATCY 4 cut(s) 361, 370, 525, 1523
BtgI CCRYGG 1 cut(s) 434
BtsCI GGATG 5 cut(s) 804, 873, 1238, 1468, 1486
BtsI GCAGTG 1 cut(s) 342
BtsIMutI CAGTG 4 cut(s) 342, 693, 849, 1063
BveI ACCTGC 2 cut(s) 1161, 1612
Cac8I GCNNGC 5 cut(s) 943, 1034, 1551, 1609, 1703
CaiI CAGNNNCTG 1 cut(s) 389
Cfr10I RCCGGY 1 cut(s) 1200
Cfr13I GGNCC 5 cut(s) 232, 658, 1115, 1328, 1719
CseI GACGC 1 cut(s) 1599
Csp6I GTAC 2 cut(s) 542, 639
CspCI CAANNNNNGTGG 2 cut(s) 277, 312
CviAII CATG 9 cut(s) 301, 435, 553, 667, 1071, 1250, 1366, 1402, 1528
CviQI GTAC 2 cut(s) 542, 639
DdeI CTNAG 3 cut(s) 454, 1044, 1636
DpnI GATC 7 cut(s) 238, 363, 372, 527, 914, 1525, 1680
DpnII GATC 7 cut(s) 236, 361, 370, 525, 912, 1523, 1678
DriI GACNNNNNGTC 1 cut(s) 1595
EaeI YGGCCR 4 cut(s) 781, 1202, 1404, 1703
Eam1104I CTCTTC 2 cut(s) 570, 711
Eam1105I GACNNNNNGTC 1 cut(s) 1595
EarI CTCTTC 2 cut(s) 570, 711
Eco130I CCWWGG 7 cut(s) 228, 434, 470, 836, 969, 1111, 1687
Eco24I GRGCYC 2 cut(s) 8, 1455
Eco31I GGTCTC 1 cut(s) 968
Eco47I GGWCC 3 cut(s) 232, 658, 1328
EcoO109I RGGNCCY 2 cut(s) 1115, 1719
EcoRI GAATTC 1 cut(s) 740
EcoRII CCWGG 2 cut(s) 314, 731
EcoT14I CCWWGG 7 cut(s) 228, 434, 470, 836, 969, 1111, 1687
EcoT38I GRGCYC 2 cut(s) 8, 1455
ErhI CCWWGG 7 cut(s) 228, 434, 470, 836, 969, 1111, 1687
FaeI CATG 9 cut(s) 304, 438, 556, 670, 1074, 1253, 1369, 1405, 1531
FalI AAGNNNNNCTT 2 cut(s) 606, 638
FaqI GGGAC 5 cut(s) 260, 711, 909, 1314, 1365
FatI CATG 9 cut(s) 300, 434, 552, 666, 1070, 1249, 1365, 1401, 1527
FauI CCCGC 1 cut(s) 627
FblI GTMKAC 1 cut(s) 1168
Fnu4HI GCNGC 2 cut(s) 408, 500
FokI GGATG 5 cut(s) 791, 880, 1225, 1455, 1473
FriOI GRGCYC 2 cut(s) 8, 1455
Fsp4HI GCNGC 2 cut(s) 408, 500
FspBI CTAG 4 cut(s) 678, 876, 1017, 1112
GluI GCNGC 2 cut(s) 408, 500
GsaI CCCAGC 1 cut(s) 1335
HapII CCGG 6 cut(s) 655, 886, 893, 959, 978, 1201
HgaI GACGC 1 cut(s) 1599
Hin1II CATG 9 cut(s) 304, 438, 556, 670, 1074, 1253, 1369, 1405, 1531
HincII GTYRAC 1 cut(s) 1482
HindII GTYRAC 1 cut(s) 1482
HinfI GANTC 6 cut(s) 273, 339, 1075, 1141, 1478, 1664
HpaII CCGG 6 cut(s) 655, 886, 893, 959, 978, 1201
HphI GGTGA 4 cut(s) 423, 608, 1136, 1405
Hpy166II GTNNAC 6 cut(s) 84, 460, 542, 1169, 1296, 1482
Hpy188I TCNGA 7 cut(s) 200, 224, 395, 566, 917, 1008, 1581
Hpy188III TCNNGA 1 cut(s) 762
Hpy8I GTNNAC 6 cut(s) 84, 460, 542, 1169, 1296, 1482
HpyAV CCTTC 5 cut(s) 62, 153, 334, 629, 921
HpyCH4III ACNGT 5 cut(s) 391, 853, 1058, 1166, 1361
HpyCH4IV ACGT 1 cut(s) 80
HpyCH4V TGCA 9 cut(s) 266, 383, 518, 941, 1099, 1156, 1247, 1306, 1553
HpyF10VI GCNNNNNNNGC 1 cut(s) 1698
HpyF3I CTNAG 3 cut(s) 454, 1044, 1636
HpySE526I ACGT 1 cut(s) 80
Hsp92II CATG 9 cut(s) 304, 438, 556, 670, 1074, 1253, 1369, 1405, 1531
Kzo9I GATC 7 cut(s) 236, 361, 370, 525, 912, 1523, 1678
LmnI GCTCC 2 cut(s) 496, 586
Lsp1109I GCAGC 2 cut(s) 419, 486
LweI GCATC 1 cut(s) 664
MaeI CTAG 4 cut(s) 678, 876, 1017, 1112
MaeII ACGT 1 cut(s) 80
MaeIII GTNAC 6 cut(s) 46, 385, 449, 1058, 1361, 1457
MalI GATC 7 cut(s) 238, 363, 372, 527, 914, 1525, 1680
MboI GATC 7 cut(s) 236, 361, 370, 525, 912, 1523, 1678
MboII GAAGA 5 cut(s) 92, 587, 626, 698, 842
MfeI CAATTG 1 cut(s) 1473
MflI RGATCY 4 cut(s) 361, 370, 525, 1523
MhlI GDGCHC 4 cut(s) 8, 591, 851, 1455
MlsI TGGCCA 1 cut(s) 1406
MluCI AATT 6 cut(s) 740, 746, 1000, 1276, 1314, 1473
MluNI TGGCCA 1 cut(s) 1406
MlyI GAGTC 3 cut(s) 282, 1487, 1673
MmeI TCCRAC 2 cut(s) 940, 1146
Mox20I TGGCCA 1 cut(s) 1406
MscI TGGCCA 1 cut(s) 1406
MseI TTAA 3 cut(s) 305, 444, 1518
MslI CAYNNNNRTG 4 cut(s) 299, 594, 608, 1532
Msp20I TGGCCA 1 cut(s) 1406
MspA1I CMGCKG 1 cut(s) 254
MspCI CTTAAG 1 cut(s) 1517
MspI CCGG 6 cut(s) 655, 886, 893, 959, 978, 1201
MspR9I CCNGG 4 cut(s) 316, 656, 733, 894
MunI CAATTG 1 cut(s) 1473
MvaI CCWGG 2 cut(s) 316, 733
MwoI GCNNNNNNNGC 1 cut(s) 1698
NciI CCSGG 2 cut(s) 656, 894
NcoI CCATGG 1 cut(s) 434
NdeII GATC 7 cut(s) 236, 361, 370, 525, 912, 1523, 1678
NlaIII CATG 9 cut(s) 304, 438, 556, 670, 1074, 1253, 1369, 1405, 1531
NlaIV GGNNCC 6 cut(s) 527, 659, 1117, 1134, 1330, 1721
NmuCI GTSAC 1 cut(s) 1058
NspI RCATGY 3 cut(s) 304, 556, 1369
OliI CACNNNNGTG 1 cut(s) 594
PaqCI CACCTGC 1 cut(s) 1161
PciI ACATGT 3 cut(s) 300, 552, 1365
PfeI GAWTC 3 cut(s) 339, 1075, 1141
PkrI GCNGC 2 cut(s) 409, 501
PleI GAGTC 3 cut(s) 281, 1486, 1672
PpsI GAGTC 3 cut(s) 281, 1486, 1672
PscI ACATGT 3 cut(s) 300, 552, 1365
Psp6I CCWGG 2 cut(s) 314, 731
PspFI CCCAGC 1 cut(s) 1331
PspGI CCWGG 2 cut(s) 314, 731
PspN4I GGNNCC 6 cut(s) 527, 659, 1117, 1134, 1330, 1721
PspPI GGNCC 5 cut(s) 232, 658, 1115, 1328, 1719
PstI CTGCAG 1 cut(s) 1158
PstNI CAGNNNCTG 1 cut(s) 389
PsuI RGATCY 4 cut(s) 361, 370, 525, 1523
PvuII CAGCTG 1 cut(s) 254
RsaI GTAC 2 cut(s) 543, 640
RsaNI GTAC 2 cut(s) 542, 639
RseI CAYNNNNRTG 4 cut(s) 299, 594, 608, 1532
SaqAI TTAA 3 cut(s) 305, 444, 1518
SatI GCNGC 2 cut(s) 408, 500
Sau3AI GATC 7 cut(s) 236, 361, 370, 525, 912, 1523, 1678
Sau96I GGNCC 5 cut(s) 232, 658, 1115, 1328, 1719
SchI GAGTC 3 cut(s) 282, 1487, 1673
ScrFI CCNGG 4 cut(s) 316, 656, 733, 894
SduI GDGCHC 4 cut(s) 8, 591, 851, 1455
SfaNI GCATC 1 cut(s) 664
SfcI CTRYAG 2 cut(s) 1154, 1162
SinI GGWCC 3 cut(s) 232, 658, 1328
SmiMI CAYNNNNRTG 4 cut(s) 299, 594, 608, 1532
SmlI CTYRAG 2 cut(s) 1427, 1517
SmoI CTYRAG 2 cut(s) 1427, 1517
SpeI ACTAGT 1 cut(s) 875
Sse9I AATT 6 cut(s) 740, 746, 1000, 1276, 1314, 1473
SsiI CCGC 2 cut(s) 620, 1692
SspI AATATT 1 cut(s) 261
SspMI CTAG 4 cut(s) 678, 876, 1017, 1112
StyD4I CCNGG 4 cut(s) 314, 654, 731, 892
StyI CCWWGG 7 cut(s) 228, 434, 470, 836, 969, 1111, 1687
TaaI ACNGT 5 cut(s) 391, 853, 1058, 1166, 1361
TaiI ACGT 1 cut(s) 83
TaqI TCGA 2 cut(s) 763, 798
TaqII GACCGA 1 cut(s) 249
TasI AATT 6 cut(s) 740, 746, 1000, 1276, 1314, 1473
TfiI GAWTC 3 cut(s) 339, 1075, 1141
Tru1I TTAA 3 cut(s) 305, 444, 1518
Tru9I TTAA 3 cut(s) 305, 444, 1518
TscAI CASTG 4 cut(s) 349, 700, 856, 1063
TseFI GTSAC 1 cut(s) 1058
TseI GCWGC 2 cut(s) 407, 499
Tsp45I GTSAC 1 cut(s) 1058
TspDTI ATGAA 2 cut(s) 92, 592
TspGWI ACGGA 1 cut(s) 650
TspRI CASTG 4 cut(s) 349, 700, 856, 1063
Vha464I CTTAAG 1 cut(s) 1517
VpaK11BI GGWCC 3 cut(s) 232, 658, 1328
XapI RAATTY 3 cut(s) 740, 746, 1276
XceI RCATGY 3 cut(s) 304, 556, 1369
XcmI CCANNNNNNNNNTGG 2 cut(s) 418, 1694
XmaJI CCTAGG 1 cut(s) 1111
XmiI GTMKAC 1 cut(s) 1168
XspI CTAG 4 cut(s) 678, 876, 1017, 1112
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.