Rh5AG511100

Domain of unknown function (DUF4283)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
OG0000073
Physical Location & Seq
Reverse (-)
86414212 .. 86415426
1215 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5AG511100.1

Sequence Viewer

Length: 1215 bp
ATGCCTGATCAATCCCTACCTCCAACACCTCCTGCCAACCTTGGGGATCTTTTCCTCAAATTGAAACCTGTTAGCCCTGATCAATTTGATGAAACCACTCTGGTGGGTTTTGTCATCTCTGATCGTTCTCTTAATGCCCTTACTGTGATGCGCATTCTTCTTCAAGCGTGGTCTACTATCGGGCGTTTCCAAATGCAACCCATTCGTGGTGGTACACTCTATTCCATCACAGCCCCCTCTGCGGCAGCTGCTGACCAATTGCTCGACCGCGGTCCCTGGTCAGTGATGGGCTGCAGTGTTTCCATCCATCCGTGGCCACCTCTTAGCCGTCTTGAAGATATTCCAGTCTATCTGATCACTTTTTGGGTGCAAGTCCATGGCCTCCCTCCTGCGTTTATGACTGAAGAAAATGCTCGTTTGATTGGTGCTCAAATTGGACGAGTTGTTGCAGTGGATGATCCTCATTCGTTGGAGGTCTGGCGAGGGTTTCTGCGTTTGCGGGTTGAACTTGACTCCAGGGCCCCTTTCTTACCTGGGTTCTGGTTCAATCGGTCTACCGAAGTAGCAGCCTGGGCCGAGATTCAGTATGAACGTCTCTCTGATTGGTGTTTCAGATGTGGTCGCCTTGGTCACACCATATCTCACTGTCAGATGCTGCGCCATCCCTCGGCGGATCGAATGGGCACGTGGAATGGCATTTCTTCCCCCCGTAGTTTTCCTCCGGACATCCAGCGATCGGTGGAGCATTTTCCAGCTCATGATACCCGGCGGAACCGGTGGGCTGATCGTCGTGCTCCGTCGACAACTACGGCCATGCAGTTCCCCAATCTCTCTCAGCCGTGGATTCCATTGCCGGTGCCCGGTGCCCTAGTCCTCGCTCACCCTATGCAAGGCCGCTGGCAGCCAACCACTACAGATCCTCCACCTGTTGAGTTCCTGCCTGACACGTCAGAATCTCTGGACCCATCTCCCACAGTTCCTTCGTCGAGGGGTAAGGGGAAGGTTGACGAGTTGTCAACTACTCTCAACTCTATCTCTTCAGATGTTCCAATCCCCTATGACGTGTTGGACATGCAGCTTGCCATATCACTTTCCCAGGTTGAGCTGGCTGATGCTGAGATGGCAGATCCCCAGGCCCCTTTGGGTCACATAATGGAAGATGTACAAGCCCAACAGGCCGCACTGTCTTCTCTTTCACAACTAGGCCCAATTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 zf-CCHC_4 zf-RING_2

Protein Analysis

404

Amino Acids

44.76

Weight (kDa)

5.36

Isoelectric Point (pI)

46.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-CCHC_4 PF14392 188 - 217 2.4e-07 Zinc knuckle
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000073)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17821 FvH4_2g04610 FvH4_2g09611 FvH4_2g13563 FvH4_3g21493 FvH4_3g32115 FvH4_3g35060 FvH4_4g00220 FvH4_4g06410 FvH4_4g10367 FvH4_4g10367 FvH4_4g10367 FvH4_5g06101 FvH4_5g08842 FvH4_5g27366 FvH4_5g31283 FvH4_6g11611 FvH4_6g23032 FvH4_7g05661 FvH4_7g06172
malus_domestica MD13G1263700.v1.1
prunus_persica Prupe.1G292300_v2.0.a1 Prupe.5G009700_v2.0.a1 Prupe.6G158100_v2.0.a1 Prupe.8G025100_v2.0.a1 Prupe.8G042600_v2.0.a1
pyrus_communis pycom02g02250 pycom02g16030 pycom05g10490 pycom09g06450 pycom09g06460 pycom13g26200 pycom16g17700
rosa_chinensis RchiOBHm_Chr2g0163321 RchiOBHm_Chr4g0401981 RchiOBHm_Chr5g0005991 RchiOBHm_Chr5g0027191 RchiOBHm_Chr6g0249771
rosa_laevigata RLG00000001040 RLG00000001764 RLG00000002239 RLG00000002240 RLG00000003259 RLG00000008993 RLG00000013847 RLG00000014178 RLG00000015576 RLG00000017269 RLG00000017355 RLG00000018127 RLG00000018602 RLG00000018615 RLG00000019904 RLG00000020044 RLG00000021849 RLG00000021850 RLG00000027965 RLG00000029266 RLG00000029820 RLG00000031112 RLG00000031915 RLG00000033568 RLG00000035013 RLG00000035677 RLG00000036568 RLG00000036628
rosa_multiflora Rmu_co8254085.1_g000001 Rmu_co8462383.1_g000001 Rmu_sc0000185.1_g000049 Rmu_sc0000251.1_g000018 Rmu_sc0000367.1_g000094 Rmu_sc0000498.1_g000023 Rmu_sc0000868.1_g000005 Rmu_sc0001521.1_g000047 Rmu_sc0001534.1_g000007 Rmu_sc0002014.1_g000012 Rmu_sc0003214.1_g000009 Rmu_sc0003573.1_g000041 Rmu_sc0003832.1_g000023 Rmu_sc0004677.1_g000015 Rmu_sc0004967.1_g000014 Rmu_sc0005426.1_g000001 Rmu_sc0005621.1_g000004 Rmu_sc0005640.1_g000009 Rmu_sc0005947.1_g000034 Rmu_sc0006889.1_g000011 Rmu_sc0007121.1_g000014 Rmu_sc0009191.1_g000017 Rmu_sc0010556.1_g000011 Rmu_sc0011396.1_g000007 Rmu_sc0019862.1_g000002 Rmu_sc0022931.1_g000003 Rmu_sc0024164.1_g000001 Rmu_ssc0000391.1_g000027
rosa_roxburghii Rroxscaffold_1G00050060 Rroxscaffold_1G00061810 Rroxscaffold_2G00109590 Rroxscaffold_2G00113810 Rroxscaffold_2G00124040 Rroxscaffold_2G00143620 Rroxscaffold_2G00154760 Rroxscaffold_4G00302820 Rroxscaffold_4G00302830 Rroxscaffold_4G00308680 Rroxscaffold_4G00310240 Rroxscaffold_4G00327890 Rroxscaffold_5G00334600 Rroxscaffold_5G00336050 Rroxscaffold_5G00346560 Rroxscaffold_5G00347860 Rroxscaffold_5G00347870 Rroxscaffold_5G00349330 Rroxscaffold_5G00351980 Rroxscaffold_6G00395280 Rroxscaffold_6G00396750 Rroxscaffold_6G00402910 Rroxscaffold_7G00174790 Rroxscaffold_7G00177570 Rroxscaffold_7G00191820 Rroxscaffold_7G00203480 Rroxscaffold_7G00204380
rosa_rugosa Rorug01G0106600 Rorug01G0106600 Rorug01G0148500.1 Rorug02G0224200 Rorug02G0225500 Rorug02G0233000 Rorug02G0630400 Rorug03G0198000 Rorug03G0232600.1 Rorug03G0240500 Rorug04G0032900 Rorug04G0073300 Rorug04G0118500 Rorug04G0149600.1 Rorug04G0205100 Rorug04G0256700 Rorug05G0020200 Rorug05G0050000 Rorug05G0247300 Rorug05G0295100 Rorug05G0337900 Rorug05G0542600 Rorug06G0034800 Rorug06G0035100 Rorug06G0220100 Rorug07G0091900 Rorug07G0271200
rosa_samantha Rh1AG118200 Rh1AG253000 Rh1AG296300 Rh1AG409000 Rh1AG410600 Rh1BG073400 Rh1BG130400 Rh1BG147300 Rh1BG163600 Rh1CG016000 Rh1DG012200 Rh1DG012300 Rh1DG078600 Rh1DG078800 Rh1DG138100 Rh1DG179200 Rh1DG192600 Rh1DG194500 Rh1DG194600 Rh1DG214300 Rh1DG245900 Rh1DG267000 Rh1DG322700 Rh1DG442700 Rh2AG282000 Rh2AG423000 Rh2AG423100 Rh2AG460700 Rh2AG466200 Rh2AG513400 Rh2AG547000 Rh2BG277800 Rh2BG281200 Rh2BG298300 Rh2BG304300 Rh2BG433500 Rh2CG276000 Rh2CG282600 Rh2CG325500 Rh2CG393000 Rh2DG319200 Rh2DG443400 Rh3AG169300 Rh3AG303600 Rh3BG195000 Rh3BG282600 Rh3BG343400 Rh3BG343500 Rh3BG344100 Rh3CG111700 Rh3CG185700 Rh3CG259100 Rh3CG293000 Rh3CG317900 Rh3CG340900 Rh3CG341000 Rh3CG341100 Rh3CG354700 Rh3CG359200 Rh3CG368100 Rh3DG179900 Rh3DG288700 Rh3DG302600 Rh3DG316000 Rh3DG324500 Rh3DG324600 Rh3DG343200 Rh3DG343300 Rh3DG362400 Rh4AG071800 Rh4BG034000 Rh4BG044300 Rh4BG044400 Rh4BG069600 Rh4BG157400 Rh4CG007000 Rh4CG030400 Rh4CG037900 Rh4CG077700 Rh4CG115000 Rh4CG162400 Rh4CG162500 Rh4CG165500 Rh4CG165600 Rh4CG172900 Rh4CG239700 Rh4DG055900 Rh4DG173200 Rh5AG354900 Rh5AG511100 Rh5BG112600 Rh5BG541000 Rh5BG541100 Rh5BG549300 Rh5CG004400 Rh5CG315000 Rh5CG563800 Rh5CG572100 Rh5DG112200 Rh5DG191300 Rh5DG407600 Rh5DG407700 Rh5DG567500 Rh6AG002600 Rh6AG051400 Rh6AG199800 Rh6AG199900 Rh6AG206200 Rh6AG391000 Rh6AG391100 Rh6BG007500 Rh6BG053400 Rh6BG225900 Rh6BG227100 Rh6BG232400 Rh6CG091100 Rh6CG125400 Rh6CG186700 Rh6CG222700 Rh6CG222800 Rh6CG235500 Rh6CG247200 Rh6CG331200 Rh6CG465100 Rh6DG183500 Rh6DG213500 Rh6DG238800 Rh6DG263700 Rh7AG211800 Rh7AG441800 Rh7BG008600 Rh7BG253000 Rh7BG390000 Rh7CG189600 Rh7CG401500 Rh7CG424200 Rh7CG428700 Rh7CG479800 Rh7CG494300 Rh7DG177000 Rh7DG218700 Rh7DG254000 Rh7DG294800 Rh7DG407200 Rh7DG448800 Rh7DG461500
rosa_wichuraiana Rw0G012180 Rw1G005270 Rw1G012310 Rw1G016890 Rw1G021700 Rw2G014380 Rw2G027690 Rw3G016400 Rw3G028230 Rw3G029320 Rw4G002060 Rw4G002100 Rw4G003980 Rw4G014140 Rw4G014770 Rw4G014780 Rw4G015760 Rw4G021230 Rw5G000520 Rw5G035610 Rw6G001680 Rw6G017890 Rw6G027440 Rw6G034130 Rw6G034170 Rw7G012430 Rw7G033870

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 152
AccB1I GGYRCC 2 cut(s) 856, 863
AccI GTMKAC 3 cut(s) 173, 554, 800
AccII CGCG 1 cut(s) 270
AccIII TCCGGA 1 cut(s) 721
AciI CCGC 8 cut(s) 242, 268, 270, 499, 671, 769, 895, 1179
AclWI GGATC 5 cut(s) 54, 452, 681, 911, 1121
AcoI YGGCCR 2 cut(s) 314, 810
AcuI CTGAAG 2 cut(s) 423, 1023
AcvI CACGTG 1 cut(s) 687
AfaI GTAC 2 cut(s) 214, 1164
AfiI CCNNNNNNNGG 7 cut(s) 42, 206, 241, 667, 736, 860, 890
AflIII ACRYGT 2 cut(s) 945, 1062
AgeI ACCGGT 1 cut(s) 774
AgsI TTSAA 5 cut(s) 64, 164, 335, 506, 547
AhdI GACNNNNNGTC 1 cut(s) 1012
AjiI CACGTC 2 cut(s) 948, 1063
AjnI CCWGG 6 cut(s) 275, 515, 532, 569, 1095, 1131
AleI CACNNNNGTG 1 cut(s) 101
AluBI AGCT 4 cut(s) 248, 755, 1078, 1105
AluI AGCT 4 cut(s) 248, 755, 1078, 1105
Alw21I GWGCWC 2 cut(s) 430, 796
Alw26I GTCTC 1 cut(s) 599
AlwI GGATC 5 cut(s) 54, 452, 681, 911, 1121
AlwNI CAGNNNCTG 2 cut(s) 251, 655
Aor13HI TCCGGA 1 cut(s) 721
AoxI GGCC 9 cut(s) 314, 379, 519, 573, 810, 892, 1134, 1176, 1204
ApaI GGGCCC 1 cut(s) 523
ApeKI GCWGC 7 cut(s) 245, 248, 291, 566, 655, 901, 1075
AsiGI ACCGGT 1 cut(s) 774
Asp700I GAANNNNTTC 1 cut(s) 339
AspLEI GCGC 2 cut(s) 153, 660
AspS9I GGNCC 7 cut(s) 272, 519, 520, 573, 961, 1135, 1205
AsuC2I CCSGG 2 cut(s) 766, 861
AsuHPI GGTGA 1 cut(s) 872
AvaII GGWCC 2 cut(s) 272, 961
BaeGI GKGCMC 4 cut(s) 523, 686, 861, 868
BalI TGGCCA 1 cut(s) 316
BanI GGYRCC 2 cut(s) 856, 863
BanII GRGCYC 1 cut(s) 523
BbrPI CACGTG 1 cut(s) 687
BbsI GAAGAC 1 cut(s) 1179
Bbv12I GWGCWC 2 cut(s) 430, 796
BbvI GCAGC 7 cut(s) 235, 257, 278, 578, 642, 913, 1087
BccI CCATC 7 cut(s) 233, 280, 311, 315, 669, 973, 1114
BceAI ACGGC 3 cut(s) 312, 823, 825
BcgI CGANNNNNNTGC 2 cut(s) 185, 219
BciT130I CCWGG 6 cut(s) 277, 517, 534, 571, 1097, 1133
BclI TGATCA 3 cut(s) 7, 79, 354
BcnI CCSGG 2 cut(s) 766, 861
BcoDI GTCTC 1 cut(s) 599
BfaI CTAG 2 cut(s) 869, 1202
BfmI CTRYAG 2 cut(s) 292, 912
BglI GCCNNNNNGGC 1 cut(s) 1175
Bme1390I CCNGG 8 cut(s) 277, 517, 534, 571, 766, 861, 1097, 1133
Bme18I GGWCC 2 cut(s) 272, 961
BmeRI GACNNNNNGTC 1 cut(s) 1012
BmgBI CACGTC 2 cut(s) 948, 1063
BmgT120I GGNCC 7 cut(s) 272, 519, 520, 573, 961, 1135, 1205
BmiI GGNNCC 8 cut(s) 274, 521, 522, 773, 858, 865, 963, 1137
BmrFI CCNGG 8 cut(s) 277, 517, 534, 571, 766, 861, 1097, 1133
BmsI GCATC 3 cut(s) 138, 642, 1102
BoxI GACNNNNGTC 1 cut(s) 270
BpiI GAAGAC 1 cut(s) 1179
BpmI CTGGAG 1 cut(s) 499
BpuMI CCSGG 2 cut(s) 766, 861
BsaAI YACGTR 1 cut(s) 687
BsaWI WCCGGW 2 cut(s) 721, 774
BsaXI ACNNNNNCTCC 2 cut(s) 904, 934
Bsc4I CCNNNNNNNGG 7 cut(s) 42, 206, 241, 667, 736, 860, 890
Bse118I RCCGGY 2 cut(s) 774, 853
Bse1I ACTGG 1 cut(s) 344
Bse3DI GCAATG 1 cut(s) 848
BseAI TCCGGA 1 cut(s) 721
BseBI CCWGG 6 cut(s) 277, 517, 534, 571, 1097, 1133
BseGI GGATG 5 cut(s) 303, 307, 460, 661, 726
BseLI CCNNNNNNNGG 7 cut(s) 42, 206, 241, 667, 736, 860, 890
BseMI GCAATG 1 cut(s) 848
BseMII CTCAG 2 cut(s) 848, 1107
BseNI ACTGG 1 cut(s) 344
BseSI GKGCMC 4 cut(s) 523, 686, 861, 868
BseXI GCAGC 7 cut(s) 235, 257, 278, 578, 642, 913, 1087
Bsh1236I CGCG 1 cut(s) 270
Bsh1285I CGRYCG 2 cut(s) 268, 737
BshFI GGCC 9 cut(s) 316, 381, 521, 575, 812, 894, 1136, 1178, 1206
BshNI GGYRCC 2 cut(s) 856, 863
BshTI ACCGGT 1 cut(s) 774
BsiEI CGRYCG 2 cut(s) 268, 737
BsiHKAI GWGCWC 2 cut(s) 430, 796
BsiSI CCGG 5 cut(s) 722, 766, 775, 854, 861
BslFI GGGAC 1 cut(s) 258
BslI CCNNNNNNNGG 7 cut(s) 42, 206, 241, 667, 736, 860, 890
BsmAI GTCTC 1 cut(s) 599
BsmBI CGTCTC 1 cut(s) 599
BsmFI GGGAC 1 cut(s) 258
BsmI GAATGC 1 cut(s) 153
BsnI GGCC 9 cut(s) 316, 381, 521, 575, 812, 894, 1136, 1178, 1206
Bsp120I GGGCCC 1 cut(s) 519
Bsp1286I GDGCHC 6 cut(s) 430, 523, 686, 796, 861, 868
Bsp13I TCCGGA 1 cut(s) 721
Bsp1407I TGTACA 1 cut(s) 1162
Bsp19I CCATGG 1 cut(s) 376
BspACI CCGC 8 cut(s) 242, 268, 270, 499, 671, 769, 895, 1179
BspANI GGCC 9 cut(s) 316, 381, 521, 575, 812, 894, 1136, 1178, 1206
BspCNI CTCAG 2 cut(s) 847, 1108
BspEI TCCGGA 1 cut(s) 721
BspFNI CGCG 1 cut(s) 270
BspHI TCATGA 1 cut(s) 757
BspLI GGNNCC 8 cut(s) 274, 521, 522, 773, 858, 865, 963, 1137
BspMAI CTGCAG 1 cut(s) 296
BspPI GGATC 5 cut(s) 54, 452, 681, 911, 1121
BspT107I GGYRCC 2 cut(s) 856, 863
BsrDI GCAATG 1 cut(s) 848
BsrFI RCCGGY 2 cut(s) 774, 853
BsrGI TGTACA 1 cut(s) 1162
BsrI ACTGG 1 cut(s) 344
BssAI RCCGGY 2 cut(s) 774, 853
BssT1I CCWWGG 3 cut(s) 40, 376, 625
Bst2UI CCWGG 6 cut(s) 277, 517, 534, 571, 1097, 1133
Bst4CI ACNGT 4 cut(s) 145, 647, 976, 1185
Bst6I CTCTTC 1 cut(s) 1042
BstAUI TGTACA 1 cut(s) 1162
BstBAI YACGTR 1 cut(s) 687
BstC8I GCNNGC 3 cut(s) 899, 1080, 1107
BstDEI CTNAG 3 cut(s) 323, 834, 1116
BstDSI CCRYGG 4 cut(s) 268, 311, 376, 839
BstENI CCTNNNNNAGG 1 cut(s) 888
BstF5I GGATG 5 cut(s) 303, 307, 460, 661, 726
BstFNI CGCG 1 cut(s) 270
BstHHI GCGC 2 cut(s) 153, 660
BstMAI GTCTC 1 cut(s) 599
BstMCI CGRYCG 2 cut(s) 268, 737
BstMWI GCNNNNNNNGC 5 cut(s) 239, 248, 572, 1121, 1175
BstNI CCWGG 6 cut(s) 277, 517, 534, 571, 1097, 1133
BstNSI RCATGY 1 cut(s) 1075
BstPAI GACNNNNGTC 1 cut(s) 270
BstSCI CCNGG 8 cut(s) 275, 515, 532, 569, 764, 859, 1095, 1131
BstSFI CTRYAG 2 cut(s) 292, 912
BstSLI GKGCMC 4 cut(s) 523, 686, 861, 868
BstUI CGCG 1 cut(s) 270
BstV1I GCAGC 7 cut(s) 235, 257, 278, 578, 642, 913, 1087
BstV2I GAAGAC 1 cut(s) 1179
BstX2I RGATCY 3 cut(s) 46, 916, 1126
BstXI CCANNNNNNTGG 1 cut(s) 103
BstYI RGATCY 3 cut(s) 46, 916, 1126
BsuRI GGCC 9 cut(s) 316, 381, 521, 575, 812, 894, 1136, 1178, 1206
BtgI CCRYGG 4 cut(s) 268, 311, 376, 839
BtrI CACGTC 2 cut(s) 948, 1063
BtsCI GGATG 5 cut(s) 303, 307, 460, 661, 726
BtsI GCAGTG 2 cut(s) 301, 456
BtsIMutI CAGTG 5 cut(s) 288, 301, 456, 643, 1181
Cac8I GCNNGC 3 cut(s) 899, 1080, 1107
CaiI CAGNNNCTG 2 cut(s) 251, 655
CciI TCATGA 1 cut(s) 757
CfoI GCGC 2 cut(s) 153, 660
Cfr10I RCCGGY 2 cut(s) 774, 853
Cfr13I GGNCC 7 cut(s) 272, 519, 520, 573, 961, 1135, 1205
Cfr42I CCGCGG 1 cut(s) 271
Csp6I GTAC 2 cut(s) 213, 1163
CspAI ACCGGT 1 cut(s) 774
CviAII CATG 4 cut(s) 377, 758, 814, 1072
CviQI GTAC 2 cut(s) 213, 1163
DdeI CTNAG 3 cut(s) 323, 834, 1116
DriI GACNNNNNGTC 1 cut(s) 1012
EaeI YGGCCR 2 cut(s) 314, 810
Eam1104I CTCTTC 1 cut(s) 1042
Eam1105I GACNNNNNGTC 1 cut(s) 1012
EarI CTCTTC 1 cut(s) 1042
EciI GGCGGA 2 cut(s) 686, 784
Eco130I CCWWGG 3 cut(s) 40, 376, 625
Eco24I GRGCYC 1 cut(s) 523
Eco47I GGWCC 2 cut(s) 272, 961
Eco57I CTGAAG 2 cut(s) 423, 1023
Eco72I CACGTG 1 cut(s) 687
EcoNI CCTNNNNNAGG 1 cut(s) 888
EcoO109I RGGNCCY 3 cut(s) 519, 520, 1135
EcoRII CCWGG 6 cut(s) 275, 515, 532, 569, 1095, 1131
EcoT14I CCWWGG 3 cut(s) 40, 376, 625
EcoT38I GRGCYC 1 cut(s) 523
ErhI CCWWGG 3 cut(s) 40, 376, 625
Esp3I CGTCTC 1 cut(s) 599
FaeI CATG 4 cut(s) 380, 761, 817, 1075
FaqI GGGAC 1 cut(s) 258
FatI CATG 4 cut(s) 376, 757, 813, 1071
FauI CCCGC 1 cut(s) 492
FbaI TGATCA 3 cut(s) 7, 79, 354
FblI GTMKAC 3 cut(s) 173, 554, 800
FokI GGATG 5 cut(s) 290, 294, 467, 648, 713
FriOI GRGCYC 1 cut(s) 523
FspAI RTGCGCAY 1 cut(s) 152
FspBI CTAG 2 cut(s) 869, 1202
FspI TGCGCA 1 cut(s) 152
GlaI GCGC 2 cut(s) 152, 659
GsuI CTGGAG 1 cut(s) 499
HaeIII GGCC 9 cut(s) 316, 381, 521, 575, 812, 894, 1136, 1178, 1206
HapII CCGG 5 cut(s) 722, 766, 775, 854, 861
HhaI GCGC 2 cut(s) 153, 660
Hin1II CATG 4 cut(s) 380, 761, 817, 1075
Hin6I GCGC 2 cut(s) 151, 658
HinP1I GCGC 2 cut(s) 151, 658
HincII GTYRAC 3 cut(s) 801, 1006, 1017
HindII GTYRAC 3 cut(s) 801, 1006, 1017
HinfI GANTC 4 cut(s) 512, 580, 844, 953
HpaII CCGG 5 cut(s) 722, 766, 775, 854, 861
HphI GGTGA 1 cut(s) 872
Hpy166II GTNNAC 6 cut(s) 174, 215, 555, 801, 1006, 1017
Hpy188I TCNGA 7 cut(s) 121, 354, 601, 614, 651, 952, 1042
Hpy188III TCNNGA 4 cut(s) 332, 722, 758, 959
Hpy8I GTNNAC 6 cut(s) 174, 215, 555, 801, 1006, 1017
Hpy99I CGWCG 3 cut(s) 792, 802, 988
HpyAV CCTTC 2 cut(s) 990, 994
HpyCH4III ACNGT 4 cut(s) 145, 647, 976, 1185
HpyCH4IV ACGT 4 cut(s) 592, 686, 947, 1062
HpyCH4V TGCA 7 cut(s) 196, 294, 370, 449, 817, 889, 1075
HpyF10VI GCNNNNNNNGC 5 cut(s) 239, 248, 572, 1121, 1175
HpyF3I CTNAG 3 cut(s) 323, 834, 1116
HpySE526I ACGT 4 cut(s) 592, 686, 947, 1062
Hsp92II CATG 4 cut(s) 380, 761, 817, 1075
HspAI GCGC 2 cut(s) 151, 658
Kpn2I TCCGGA 1 cut(s) 721
Ksp22I TGATCA 3 cut(s) 7, 79, 354
KspI CCGCGG 1 cut(s) 271
LmnI GCTCC 2 cut(s) 742, 799
Lsp1109I GCAGC 7 cut(s) 235, 257, 278, 578, 642, 913, 1087
LweI GCATC 3 cut(s) 138, 642, 1102
MaeI CTAG 2 cut(s) 869, 1202
MaeII ACGT 4 cut(s) 592, 686, 947, 1062
MaeIII GTNAC 2 cut(s) 629, 1145
MboII GAAGA 8 cut(s) 149, 152, 347, 416, 693, 1029, 1169, 1179
MfeI CAATTG 1 cut(s) 257
MflI RGATCY 3 cut(s) 46, 916, 1126
MhlI GDGCHC 6 cut(s) 430, 523, 686, 796, 861, 868
MlsI TGGCCA 1 cut(s) 316
MluCI AATT 5 cut(s) 59, 83, 257, 432, 1209
MluNI TGGCCA 1 cut(s) 316
MlyI GAGTC 1 cut(s) 506
MmeI TCCRAC 3 cut(s) 47, 450, 1047
Mox20I TGGCCA 1 cut(s) 316
MroI TCCGGA 1 cut(s) 721
MroXI GAANNNNTTC 1 cut(s) 339
MscI TGGCCA 1 cut(s) 316
MseI TTAA 1 cut(s) 132
MslI CAYNNNNRTG 1 cut(s) 101
Msp20I TGGCCA 1 cut(s) 316
MspA1I CMGCKG 3 cut(s) 248, 270, 897
MspI CCGG 5 cut(s) 722, 766, 775, 854, 861
MspR9I CCNGG 8 cut(s) 277, 517, 534, 571, 766, 861, 1097, 1133
MunI CAATTG 1 cut(s) 257
Mva1269I GAATGC 1 cut(s) 153
MvaI CCWGG 6 cut(s) 277, 517, 534, 571, 1097, 1133
MvnI CGCG 1 cut(s) 270
MwoI GCNNNNNNNGC 5 cut(s) 239, 248, 572, 1121, 1175
NciI CCSGG 2 cut(s) 766, 861
NcoI CCATGG 1 cut(s) 376
NlaIII CATG 4 cut(s) 380, 761, 817, 1075
NlaIV GGNNCC 8 cut(s) 274, 521, 522, 773, 858, 865, 963, 1137
NmeAIII GCCGAG 2 cut(s) 601, 647
NmuCI GTSAC 2 cut(s) 629, 1145
NsbI TGCGCA 1 cut(s) 152
NspI RCATGY 1 cut(s) 1075
OliI CACNNNNGTG 1 cut(s) 101
PagI TCATGA 1 cut(s) 757
PctI GAATGC 1 cut(s) 153
PdmI GAANNNNTTC 1 cut(s) 339
PfeI GAWTC 3 cut(s) 580, 844, 953
PinAI ACCGGT 1 cut(s) 774
Ple19I CGATCG 1 cut(s) 737
PleI GAGTC 1 cut(s) 506
PmaCI CACGTG 1 cut(s) 687
PmlI CACGTG 1 cut(s) 687
PpsI GAGTC 1 cut(s) 506
Ppu21I YACGTR 1 cut(s) 687
PshAI GACNNNNGTC 1 cut(s) 270
Psp6I CCWGG 6 cut(s) 275, 515, 532, 569, 1095, 1131
PspCI CACGTG 1 cut(s) 687
PspGI CCWGG 6 cut(s) 275, 515, 532, 569, 1095, 1131
PspN4I GGNNCC 8 cut(s) 274, 521, 522, 773, 858, 865, 963, 1137
PspOMI GGGCCC 1 cut(s) 519
PspPI GGNCC 7 cut(s) 272, 519, 520, 573, 961, 1135, 1205
PstI CTGCAG 1 cut(s) 296
PstNI CAGNNNCTG 2 cut(s) 251, 655
PsuI RGATCY 3 cut(s) 46, 916, 1126
PvuI CGATCG 1 cut(s) 737
PvuII CAGCTG 1 cut(s) 248
RsaI GTAC 2 cut(s) 214, 1164
RsaNI GTAC 2 cut(s) 213, 1163
RseI CAYNNNNRTG 1 cut(s) 101
SacII CCGCGG 1 cut(s) 271
SalI GTCGAC 1 cut(s) 799
SaqAI TTAA 1 cut(s) 132
Sau96I GGNCC 7 cut(s) 272, 519, 520, 573, 961, 1135, 1205
SchI GAGTC 1 cut(s) 506
ScrFI CCNGG 8 cut(s) 277, 517, 534, 571, 766, 861, 1097, 1133
SduI GDGCHC 6 cut(s) 430, 523, 686, 796, 861, 868
SfaNI GCATC 3 cut(s) 138, 642, 1102
SfcI CTRYAG 2 cut(s) 292, 912
Sfr303I CCGCGG 1 cut(s) 271
SgrBI CCGCGG 1 cut(s) 271
SinI GGWCC 2 cut(s) 272, 961
SmiMI CAYNNNNRTG 1 cut(s) 101
Sse9I AATT 5 cut(s) 59, 83, 257, 432, 1209
SsiI CCGC 8 cut(s) 242, 268, 270, 499, 671, 769, 895, 1179
SspMI CTAG 2 cut(s) 869, 1202
StyD4I CCNGG 8 cut(s) 275, 515, 532, 569, 764, 859, 1095, 1131
StyI CCWWGG 3 cut(s) 40, 376, 625
TaaI ACNGT 4 cut(s) 145, 647, 976, 1185
TaiI ACGT 4 cut(s) 595, 689, 950, 1065
TaqI TCGA 4 cut(s) 264, 676, 800, 986
TaqII GACCGA 1 cut(s) 540
TasI AATT 5 cut(s) 59, 83, 257, 432, 1209
TatI WGTACW 1 cut(s) 1162
TauI GCSGC 3 cut(s) 245, 897, 1181
TfiI GAWTC 3 cut(s) 580, 844, 953
Tru1I TTAA 1 cut(s) 132
Tru9I TTAA 1 cut(s) 132
TscAI CASTG 5 cut(s) 288, 301, 456, 650, 1188
TseFI GTSAC 2 cut(s) 629, 1145
TseI GCWGC 7 cut(s) 245, 248, 291, 566, 655, 901, 1075
Tsp45I GTSAC 2 cut(s) 629, 1145
TspDTI ATGAA 2 cut(s) 105, 603
TspGWI ACGGA 2 cut(s) 300, 786
TspRI CASTG 5 cut(s) 288, 301, 456, 650, 1188
VpaK11BI GGWCC 2 cut(s) 272, 961
XagI CCTNNNNNAGG 1 cut(s) 888
XceI RCATGY 1 cut(s) 1075
XmiI GTMKAC 3 cut(s) 173, 554, 800
XmnI GAANNNNTTC 1 cut(s) 339
XspI CTAG 2 cut(s) 869, 1202
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.