Rh7DG407200

Domain of unknown function (DUF4283)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
OG0000073
Physical Location & Seq
Reverse (-)
57036724 .. 57038406
1683 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG407200.1

Sequence Viewer

Length: 1461 bp
ATGGAGGCTGAGACTGGCCAGTTGATCCTTGACAGAGGACCCTGGTCTGTTATGGGTCACACCATTAGCATCAATACTTGGCCCTTGGAGGCAAGACTTGAGGATGTTCCTGTTCATTCTCTGGCTATTTGGATTCAGACCCACGGACTTCCTCGGGGGCAGATGACTCGATCCAATGCCAATCTCCTTGGAGCGGTTGCTGGTTCGGTGATGGAAATTGAAGATCCTAACTCCATTAATGGATCGAGGGGTTTTCTTCGTGTACGGGTCAACATAAATACCCTTCTTCCCCTTACTCCCTGTGTTTGGATCAGGAGTGGAGCCAATAATCCCACTTGGGTGGAGTTCCGGTATGAGAGGATCTCTCTCTTCTGCTACAACTGTGGTCGCTTGGGGCATAGTGAACGTTTTTGCAACCAGGCCCGCTTCCAAAGAGCCGATCGTTTGGGTGTGTGGATGATCACCCCAACTGCGAGACGTCTCTCTCATGGATCATCTTTTGATAGTGAGAGAGGTTGGGACCACTTCCAAAGACAGAGCTTTCAAACCAGACAAAATTGTTGTGAGTTTCCAAGCTCCCCTCTAACCCAAGCACTCATTCACGTGCCCCCTCAGCCTTCTACGAGGCCCCTCATCATTTCTGACATCCCTTCTCCACCCGCAACTGTTACTCACCAAAACAACTCTCCCATTCCGTTGACCGTTGCTTCCTCCTCTGTAGGCCCTCCGGTCAAAGGTAAGGCTAAGGTCGGCCCTGTTAATGAACCTATTGTTGAGCCACATAACCACACTCACTCTGATACTCTAGCTGATCTCTTCCCTACCATCACCCACTCAAACTCACAAATCAATGCTATCTCTCTGCCTCCACAACCACCACTTCCACCTACTGACCATACTATCTCTGGGATTCCTGCCTTCCTTGATCAACTCCTGCTCAAGCGATTGACGGAGGACGTTCCGGAATGTTCTTCCCGTGTCAATAAGAAGTCAAAAATTGCGTCTCCCACTCTAGCTCAACCGGATCAGTATTTAGCTCCACCATCCATTTTTCGAACAGATCATCCTTCCTTCCTCCTCCCCTATTCTGTCCATTGGGAGGCAGCGCACCCAAAGCTCCCTACCAGTCGTGGCTGTGGAAGAGGTCGTGGCGCGCGTGGTCGTGCTCATTCTGCCCGTGTTGGTGGTCCCACATCAATTGCAACCAACCACTCTCCTCTGAGTGATATTGTGGCTACACTTGATGGTATGGTTGATGTTCGTCTCATCCAGACTGAGAATTCTCTGATCTCAAGTCCCCCTTCTGATACTAATTTGTCTGATGATGCTCCTCTGTTGGGACCACAACACCCTTTGACACTTCCCACAGTTTCTGTCACTATCTCTACCCATGATAGTCCCACTCCTGTTACTATCTCTTCCCATGATAGTCCTACTACTGAAATTGGCACCGGTGGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 zf-CCHC_4 zf-RING_2

Protein Analysis

486

Amino Acids

52.86

Weight (kDa)

7.07

Isoelectric Point (pI)

43.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-CCHC_4 PF14392 104 - 139 3.9e-13 Zinc knuckle
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000073)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17821 FvH4_2g04610 FvH4_2g09611 FvH4_2g13563 FvH4_3g21493 FvH4_3g32115 FvH4_3g35060 FvH4_4g00220 FvH4_4g06410 FvH4_4g10367 FvH4_4g10367 FvH4_4g10367 FvH4_5g06101 FvH4_5g08842 FvH4_5g27366 FvH4_5g31283 FvH4_6g11611 FvH4_6g23032 FvH4_7g05661 FvH4_7g06172
malus_domestica MD13G1263700.v1.1
prunus_persica Prupe.1G292300_v2.0.a1 Prupe.5G009700_v2.0.a1 Prupe.6G158100_v2.0.a1 Prupe.8G025100_v2.0.a1 Prupe.8G042600_v2.0.a1
pyrus_communis pycom02g02250 pycom02g16030 pycom05g10490 pycom09g06450 pycom09g06460 pycom13g26200 pycom16g17700
rosa_chinensis RchiOBHm_Chr2g0163321 RchiOBHm_Chr4g0401981 RchiOBHm_Chr5g0005991 RchiOBHm_Chr5g0027191 RchiOBHm_Chr6g0249771
rosa_laevigata RLG00000001040 RLG00000001764 RLG00000002239 RLG00000002240 RLG00000003259 RLG00000008993 RLG00000013847 RLG00000014178 RLG00000015576 RLG00000017269 RLG00000017355 RLG00000018127 RLG00000018602 RLG00000018615 RLG00000019904 RLG00000020044 RLG00000021849 RLG00000021850 RLG00000027965 RLG00000029266 RLG00000029820 RLG00000031112 RLG00000031915 RLG00000033568 RLG00000035013 RLG00000035677 RLG00000036568 RLG00000036628
rosa_multiflora Rmu_co8254085.1_g000001 Rmu_co8462383.1_g000001 Rmu_sc0000185.1_g000049 Rmu_sc0000251.1_g000018 Rmu_sc0000367.1_g000094 Rmu_sc0000498.1_g000023 Rmu_sc0000868.1_g000005 Rmu_sc0001521.1_g000047 Rmu_sc0001534.1_g000007 Rmu_sc0002014.1_g000012 Rmu_sc0003214.1_g000009 Rmu_sc0003573.1_g000041 Rmu_sc0003832.1_g000023 Rmu_sc0004677.1_g000015 Rmu_sc0004967.1_g000014 Rmu_sc0005426.1_g000001 Rmu_sc0005621.1_g000004 Rmu_sc0005640.1_g000009 Rmu_sc0005947.1_g000034 Rmu_sc0006889.1_g000011 Rmu_sc0007121.1_g000014 Rmu_sc0009191.1_g000017 Rmu_sc0010556.1_g000011 Rmu_sc0011396.1_g000007 Rmu_sc0019862.1_g000002 Rmu_sc0022931.1_g000003 Rmu_sc0024164.1_g000001 Rmu_ssc0000391.1_g000027
rosa_roxburghii Rroxscaffold_1G00050060 Rroxscaffold_1G00061810 Rroxscaffold_2G00109590 Rroxscaffold_2G00113810 Rroxscaffold_2G00124040 Rroxscaffold_2G00143620 Rroxscaffold_2G00154760 Rroxscaffold_4G00302820 Rroxscaffold_4G00302830 Rroxscaffold_4G00308680 Rroxscaffold_4G00310240 Rroxscaffold_4G00327890 Rroxscaffold_5G00334600 Rroxscaffold_5G00336050 Rroxscaffold_5G00346560 Rroxscaffold_5G00347860 Rroxscaffold_5G00347870 Rroxscaffold_5G00349330 Rroxscaffold_5G00351980 Rroxscaffold_6G00395280 Rroxscaffold_6G00396750 Rroxscaffold_6G00402910 Rroxscaffold_7G00174790 Rroxscaffold_7G00177570 Rroxscaffold_7G00191820 Rroxscaffold_7G00203480 Rroxscaffold_7G00204380
rosa_rugosa Rorug01G0106600 Rorug01G0106600 Rorug01G0148500.1 Rorug02G0224200 Rorug02G0225500 Rorug02G0233000 Rorug02G0630400 Rorug03G0198000 Rorug03G0232600.1 Rorug03G0240500 Rorug04G0032900 Rorug04G0073300 Rorug04G0118500 Rorug04G0149600.1 Rorug04G0205100 Rorug04G0256700 Rorug05G0020200 Rorug05G0050000 Rorug05G0247300 Rorug05G0295100 Rorug05G0337900 Rorug05G0542600 Rorug06G0034800 Rorug06G0035100 Rorug06G0220100 Rorug07G0091900 Rorug07G0271200
rosa_samantha Rh1AG118200 Rh1AG253000 Rh1AG296300 Rh1AG409000 Rh1AG410600 Rh1BG073400 Rh1BG130400 Rh1BG147300 Rh1BG163600 Rh1CG016000 Rh1DG012200 Rh1DG012300 Rh1DG078600 Rh1DG078800 Rh1DG138100 Rh1DG179200 Rh1DG192600 Rh1DG194500 Rh1DG194600 Rh1DG214300 Rh1DG245900 Rh1DG267000 Rh1DG322700 Rh1DG442700 Rh2AG282000 Rh2AG423000 Rh2AG423100 Rh2AG460700 Rh2AG466200 Rh2AG513400 Rh2AG547000 Rh2BG277800 Rh2BG281200 Rh2BG298300 Rh2BG304300 Rh2BG433500 Rh2CG276000 Rh2CG282600 Rh2CG325500 Rh2CG393000 Rh2DG319200 Rh2DG443400 Rh3AG169300 Rh3AG303600 Rh3BG195000 Rh3BG282600 Rh3BG343400 Rh3BG343500 Rh3BG344100 Rh3CG111700 Rh3CG185700 Rh3CG259100 Rh3CG293000 Rh3CG317900 Rh3CG340900 Rh3CG341000 Rh3CG341100 Rh3CG354700 Rh3CG359200 Rh3CG368100 Rh3DG179900 Rh3DG288700 Rh3DG302600 Rh3DG316000 Rh3DG324500 Rh3DG324600 Rh3DG343200 Rh3DG343300 Rh3DG362400 Rh4AG071800 Rh4BG034000 Rh4BG044300 Rh4BG044400 Rh4BG069600 Rh4BG157400 Rh4CG007000 Rh4CG030400 Rh4CG037900 Rh4CG077700 Rh4CG115000 Rh4CG162400 Rh4CG162500 Rh4CG165500 Rh4CG165600 Rh4CG172900 Rh4CG239700 Rh4DG055900 Rh4DG173200 Rh5AG354900 Rh5AG511100 Rh5BG112600 Rh5BG541000 Rh5BG541100 Rh5BG549300 Rh5CG004400 Rh5CG315000 Rh5CG563800 Rh5CG572100 Rh5DG112200 Rh5DG191300 Rh5DG407600 Rh5DG407700 Rh5DG567500 Rh6AG002600 Rh6AG051400 Rh6AG199800 Rh6AG199900 Rh6AG206200 Rh6AG391000 Rh6AG391100 Rh6BG007500 Rh6BG053400 Rh6BG225900 Rh6BG227100 Rh6BG232400 Rh6CG091100 Rh6CG125400 Rh6CG186700 Rh6CG222700 Rh6CG222800 Rh6CG235500 Rh6CG247200 Rh6CG331200 Rh6CG465100 Rh6DG183500 Rh6DG213500 Rh6DG238800 Rh6DG263700 Rh7AG211800 Rh7AG441800 Rh7BG008600 Rh7BG253000 Rh7BG390000 Rh7CG189600 Rh7CG401500 Rh7CG424200 Rh7CG428700 Rh7CG479800 Rh7CG494300 Rh7DG177000 Rh7DG218700 Rh7DG254000 Rh7DG294800 Rh7DG407200 Rh7DG448800 Rh7DG461500
rosa_wichuraiana Rw0G012180 Rw1G005270 Rw1G012310 Rw1G016890 Rw1G021700 Rw2G014380 Rw2G027690 Rw3G016400 Rw3G028230 Rw3G029320 Rw4G002060 Rw4G002100 Rw4G003980 Rw4G014140 Rw4G014770 Rw4G014780 Rw4G015760 Rw4G021230 Rw5G000520 Rw5G035610 Rw6G001680 Rw6G017890 Rw6G027440 Rw6G034130 Rw6G034170 Rw7G012430 Rw7G033870

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 481
AccB1I GGYRCC 1 cut(s) 1448
AccBSI CCGCTC 1 cut(s) 194
AccII CGCG 2 cut(s) 1154, 1156
AccIII TCCGGA 1 cut(s) 961
AciI CCGC 3 cut(s) 194, 424, 660
AclI AACGTT 1 cut(s) 406
AclWI GGATC 8 cut(s) 19, 165, 218, 250, 317, 368, 499, 1032
AcoI YGGCCR 1 cut(s) 16
AcsI RAATTY 1 cut(s) 1279
AcvI CACGTG 1 cut(s) 604
AcyI GRCGYC 1 cut(s) 478
AfaI GTAC 1 cut(s) 264
AfiI CCNNNNNNNGG 5 cut(s) 193, 306, 734, 1099, 1337
AgeI ACCGGT 1 cut(s) 1451
AgsI TTSAA 2 cut(s) 221, 545
AjnI CCWGG 2 cut(s) 41, 417
AjuI GAANNNNNNNTTGG 2 cut(s) 582, 614
AleI CACNNNNGTG 1 cut(s) 338
AloI GAACNNNNNNTCC 2 cut(s) 1048, 1080
AluBI AGCT 6 cut(s) 540, 576, 809, 1016, 1037, 1117
AluI AGCT 6 cut(s) 540, 576, 809, 1016, 1037, 1117
Alw21I GWGCWC 1 cut(s) 1168
Alw26I GTCTC 5 cut(s) 5, 469, 485, 1008, 1268
AlwI GGATC 8 cut(s) 19, 165, 218, 250, 317, 368, 499, 1032
AlwNI CAGNNNCTG 1 cut(s) 1373
Ama87I CYCGRG 1 cut(s) 153
Aor13HI TCCGGA 1 cut(s) 961
AoxI GGCC 6 cut(s) 16, 80, 420, 626, 721, 751
ApeKI GCWGC 1 cut(s) 1103
ApoI RAATTY 1 cut(s) 1279
ArsI GACNNNNNNTTYG 2 cut(s) 986, 1018
AseI ATTAAT 1 cut(s) 237
AsiGI ACCGGT 1 cut(s) 1451
AspLEI GCGC 3 cut(s) 1108, 1154, 1156
AspS9I GGNCC 9 cut(s) 38, 81, 421, 520, 627, 722, 752, 1187, 1340
AsuHPI GGTGA 4 cut(s) 220, 454, 665, 820
AsuII TTCGAA 1 cut(s) 1054
AvaI CYCGRG 1 cut(s) 153
AvaII GGWCC 4 cut(s) 38, 520, 1187, 1340
BaeGI GKGCMC 1 cut(s) 609
BalI TGGCCA 1 cut(s) 18
BanI GGYRCC 1 cut(s) 1448
BbrPI CACGTG 1 cut(s) 604
Bbv12I GWGCWC 1 cut(s) 1168
BbvCI CCTCAGC 1 cut(s) 612
BbvI GCAGC 1 cut(s) 1115
BccI CCATC 4 cut(s) 205, 833, 1051, 1238
BcgI CGANNNNNNTGC 2 cut(s) 149, 183
BciT130I CCWGG 2 cut(s) 43, 419
BclI TGATCA 2 cut(s) 459, 925
BcoDI GTCTC 5 cut(s) 5, 469, 485, 1008, 1268
BfaI CTAG 3 cut(s) 806, 1013, 1459
BfmI CTRYAG 1 cut(s) 717
BisI GCNGC 1 cut(s) 1104
BlsI GCNGC 1 cut(s) 1105
Bme1390I CCNGG 2 cut(s) 43, 419
Bme18I GGWCC 4 cut(s) 38, 520, 1187, 1340
BmeT110I CYCGRG 1 cut(s) 153
BmgT120I GGNCC 9 cut(s) 38, 81, 421, 520, 627, 722, 752, 1187, 1340
BmiI GGNNCC 7 cut(s) 40, 322, 521, 629, 1189, 1341, 1450
BmrFI CCNGG 2 cut(s) 43, 419
BmsI GCATC 2 cut(s) 78, 1315
BoxI GACNNNNGTC 1 cut(s) 43
BplI GAGNNNNNCTC 4 cut(s) 347, 379, 349, 381
Bpu10I CCTNAGC 2 cut(s) 612, 744
Bpu14I TTCGAA 1 cut(s) 1054
BpuEI CTTGAG 3 cut(s) 119, 923, 1276
BsaAI YACGTR 1 cut(s) 604
BsaHI GRCGYC 1 cut(s) 478
BsaJI CCNNGG 5 cut(s) 41, 84, 142, 152, 187
BsaWI WCCGGW 5 cut(s) 348, 727, 961, 1021, 1451
BsaXI ACNNNNNCTCC 2 cut(s) 335, 365
Bsc4I CCNNNNNNNGG 5 cut(s) 193, 306, 734, 1099, 1337
Bse118I RCCGGY 1 cut(s) 1451
Bse1I ACTGG 3 cut(s) 19, 19, 1125
BseAI TCCGGA 1 cut(s) 961
BseBI CCWGG 2 cut(s) 43, 419
BseDI CCNNGG 5 cut(s) 41, 84, 142, 152, 187
BseGI GGATG 6 cut(s) 109, 462, 645, 1043, 1063, 1266
BseLI CCNNNNNNNGG 5 cut(s) 193, 306, 734, 1099, 1337
BseMII CTCAG 3 cut(s) 626, 1211, 1266
BseNI ACTGG 3 cut(s) 19, 19, 1125
BsePI GCGCGC 1 cut(s) 1152
BseRI GAGGAG 4 cut(s) 703, 1067, 1206, 1320
BseSI GKGCMC 1 cut(s) 609
BseXI GCAGC 1 cut(s) 1115
Bsh1236I CGCG 2 cut(s) 1154, 1156
Bsh1285I CGRYCG 1 cut(s) 442
BshFI GGCC 6 cut(s) 18, 82, 422, 628, 723, 753
BshNI GGYRCC 1 cut(s) 1448
BshTI ACCGGT 1 cut(s) 1451
BsiEI CGRYCG 1 cut(s) 442
BsiHKAI GWGCWC 1 cut(s) 1168
BsiHKCI CYCGRG 1 cut(s) 153
BsiSI CCGG 5 cut(s) 349, 728, 962, 1022, 1452
BslFI GGGAC 5 cut(s) 533, 1173, 1281, 1353, 1383
BslI CCNNNNNNNGG 5 cut(s) 193, 306, 734, 1099, 1337
BsmAI GTCTC 5 cut(s) 5, 469, 485, 1008, 1268
BsmBI CGTCTC 4 cut(s) 469, 485, 1008, 1268
BsmFI GGGAC 5 cut(s) 533, 1173, 1281, 1353, 1383
BsnI GGCC 6 cut(s) 18, 82, 422, 628, 723, 753
BsoBI CYCGRG 1 cut(s) 153
Bsp119I TTCGAA 1 cut(s) 1054
Bsp1286I GDGCHC 2 cut(s) 609, 1168
Bsp13I TCCGGA 1 cut(s) 961
BspACI CCGC 3 cut(s) 194, 424, 660
BspANI GGCC 6 cut(s) 18, 82, 422, 628, 723, 753
BspCNI CTCAG 3 cut(s) 625, 1212, 1267
BspEI TCCGGA 1 cut(s) 961
BspFNI CGCG 2 cut(s) 1154, 1156
BspLI GGNNCC 7 cut(s) 40, 322, 521, 629, 1189, 1341, 1450
BspPI GGATC 8 cut(s) 19, 165, 218, 250, 317, 368, 499, 1032
BspT104I TTCGAA 1 cut(s) 1054
BspT107I GGYRCC 1 cut(s) 1448
BsrBI CCGCTC 1 cut(s) 194
BsrFI RCCGGY 1 cut(s) 1451
BsrI ACTGG 3 cut(s) 19, 19, 1125
BssAI RCCGGY 1 cut(s) 1451
BssECI CCNNGG 5 cut(s) 41, 84, 142, 152, 187
BssHII GCGCGC 1 cut(s) 1152
BssNI GRCGYC 1 cut(s) 478
BssT1I CCWWGG 2 cut(s) 84, 187
Bst2UI CCWGG 2 cut(s) 43, 419
Bst4CI ACNGT 4 cut(s) 383, 667, 703, 1369
Bst6I CTCTTC 4 cut(s) 374, 821, 1135, 1423
BstACI GRCGYC 1 cut(s) 478
BstBAI YACGTR 1 cut(s) 604
BstBI TTCGAA 1 cut(s) 1054
BstC8I GCNNGC 2 cut(s) 424, 1154
BstDEI CTNAG 5 cut(s) 9, 612, 744, 1220, 1275
BstDSI CCRYGG 1 cut(s) 142
BstF5I GGATG 6 cut(s) 109, 462, 645, 1043, 1063, 1266
BstFNI CGCG 2 cut(s) 1154, 1156
BstHHI GCGC 3 cut(s) 1108, 1154, 1156
BstMAI GTCTC 5 cut(s) 5, 469, 485, 1008, 1268
BstMCI CGRYCG 1 cut(s) 442
BstMWI GCNNNNNNNGC 4 cut(s) 613, 1114, 1172, 1455
BstNI CCWGG 2 cut(s) 43, 419
BstPAI GACNNNNGTC 1 cut(s) 43
BstSCI CCNGG 2 cut(s) 41, 417
BstSFI CTRYAG 1 cut(s) 717
BstSLI GKGCMC 1 cut(s) 609
BstUI CGCG 2 cut(s) 1154, 1156
BstV1I GCAGC 1 cut(s) 1115
BstX2I RGATCY 2 cut(s) 223, 360
BstXI CCANNNNNNTGG 1 cut(s) 340
BstYI RGATCY 2 cut(s) 223, 360
BsuRI GGCC 6 cut(s) 18, 82, 422, 628, 723, 753
BtgI CCRYGG 1 cut(s) 142
BtsCI GGATG 6 cut(s) 109, 462, 645, 1043, 1063, 1266
Cac8I GCNNGC 2 cut(s) 424, 1154
CaiI CAGNNNCTG 1 cut(s) 1373
CfoI GCGC 3 cut(s) 1108, 1154, 1156
Cfr10I RCCGGY 1 cut(s) 1451
Cfr13I GGNCC 9 cut(s) 38, 81, 421, 520, 627, 722, 752, 1187, 1340
CseI GACGC 1 cut(s) 990
Csp6I GTAC 1 cut(s) 263
CspAI ACCGGT 1 cut(s) 1451
CspCI CAANNNNNGTGG 2 cut(s) 1180, 1215
CviAII CATG 3 cut(s) 488, 1391, 1424
CviQI GTAC 1 cut(s) 263
DdeI CTNAG 5 cut(s) 9, 612, 744, 1220, 1275
EaeI YGGCCR 1 cut(s) 16
Eam1104I CTCTTC 4 cut(s) 374, 821, 1135, 1423
EarI CTCTTC 4 cut(s) 374, 821, 1135, 1423
Eco130I CCWWGG 2 cut(s) 84, 187
Eco47I GGWCC 4 cut(s) 38, 520, 1187, 1340
Eco72I CACGTG 1 cut(s) 604
Eco88I CYCGRG 1 cut(s) 153
EcoO109I RGGNCCY 3 cut(s) 38, 627, 722
EcoRI GAATTC 1 cut(s) 1279
EcoRII CCWGG 2 cut(s) 41, 417
EcoT14I CCWWGG 2 cut(s) 84, 187
ErhI CCWWGG 2 cut(s) 84, 187
Esp3I CGTCTC 4 cut(s) 469, 485, 1008, 1268
FaeI CATG 3 cut(s) 491, 1394, 1427
FalI AAGNNNNNCTT 2 cut(s) 1285, 1317
FaqI GGGAC 5 cut(s) 533, 1173, 1281, 1353, 1383
FatI CATG 3 cut(s) 487, 1390, 1423
FauI CCCGC 2 cut(s) 431, 667
FbaI TGATCA 2 cut(s) 459, 925
Fnu4HI GCNGC 1 cut(s) 1104
FokI GGATG 6 cut(s) 116, 469, 632, 1030, 1050, 1253
Fsp4HI GCNGC 1 cut(s) 1104
FspBI CTAG 3 cut(s) 806, 1013, 1459
GlaI GCGC 3 cut(s) 1107, 1153, 1155
GluI GCNGC 1 cut(s) 1104
HaeIII GGCC 6 cut(s) 18, 82, 422, 628, 723, 753
HapII CCGG 5 cut(s) 349, 728, 962, 1022, 1452
HgaI GACGC 1 cut(s) 990
HhaI GCGC 3 cut(s) 1108, 1154, 1156
Hin1I GRCGYC 1 cut(s) 478
Hin1II CATG 3 cut(s) 491, 1394, 1427
Hin6I GCGC 3 cut(s) 1106, 1152, 1154
HinP1I GCGC 3 cut(s) 1106, 1152, 1154
HincII GTYRAC 2 cut(s) 271, 699
HindII GTYRAC 2 cut(s) 271, 699
HinfI GANTC 3 cut(s) 133, 166, 910
HpaII CCGG 5 cut(s) 349, 728, 962, 1022, 1452
HphI GGTGA 4 cut(s) 220, 454, 665, 820
Hpy166II GTNNAC 4 cut(s) 263, 271, 404, 699
Hpy188I TCNGA 7 cut(s) 138, 643, 799, 1221, 1287, 1306, 1321
Hpy188III TCNNGA 3 cut(s) 313, 962, 1270
Hpy8I GTNNAC 4 cut(s) 263, 271, 404, 699
HpyAV CCTTC 7 cut(s) 293, 627, 660, 928, 1077, 1081, 1311
HpyCH4III ACNGT 4 cut(s) 383, 667, 703, 1369
HpyCH4IV ACGT 4 cut(s) 406, 478, 603, 957
HpyCH4V TGCA 2 cut(s) 414, 1202
HpyF10VI GCNNNNNNNGC 4 cut(s) 613, 1114, 1172, 1455
HpyF3I CTNAG 5 cut(s) 9, 612, 744, 1220, 1275
HpySE526I ACGT 4 cut(s) 406, 478, 603, 957
Hsp92I GRCGYC 1 cut(s) 478
Hsp92II CATG 3 cut(s) 491, 1394, 1427
HspAI GCGC 3 cut(s) 1106, 1152, 1154
Kpn2I TCCGGA 1 cut(s) 961
Ksp22I TGATCA 2 cut(s) 459, 925
LmnI GCTCC 6 cut(s) 191, 320, 581, 1042, 1122, 1333
Lsp1109I GCAGC 1 cut(s) 1115
LweI GCATC 2 cut(s) 78, 1315
MaeI CTAG 3 cut(s) 806, 1013, 1459
MaeII ACGT 4 cut(s) 406, 478, 603, 957
MaeIII GTNAC 4 cut(s) 56, 667, 1375, 1408
MbiI CCGCTC 1 cut(s) 194
MboII GAAGA 8 cut(s) 233, 248, 278, 361, 808, 963, 1152, 1410
MfeI CAATTG 1 cut(s) 1197
MflI RGATCY 2 cut(s) 223, 360
MhlI GDGCHC 2 cut(s) 609, 1168
MlsI TGGCCA 1 cut(s) 18
MluCI AATT 7 cut(s) 216, 556, 996, 1197, 1279, 1312, 1443
MluNI TGGCCA 1 cut(s) 18
MlyI GAGTC 1 cut(s) 160
Mox20I TGGCCA 1 cut(s) 18
MroI TCCGGA 1 cut(s) 961
MscI TGGCCA 1 cut(s) 18
MseI TTAA 2 cut(s) 237, 759
MslI CAYNNNNRTG 2 cut(s) 338, 602
Msp20I TGGCCA 1 cut(s) 18
MspI CCGG 5 cut(s) 349, 728, 962, 1022, 1452
MspR9I CCNGG 2 cut(s) 43, 419
MunI CAATTG 1 cut(s) 1197
MvaI CCWGG 2 cut(s) 43, 419
MvnI CGCG 2 cut(s) 1154, 1156
MwoI GCNNNNNNNGC 4 cut(s) 613, 1114, 1172, 1455
NlaIII CATG 3 cut(s) 491, 1394, 1427
NlaIV GGNNCC 7 cut(s) 40, 322, 521, 629, 1189, 1341, 1450
NmuCI GTSAC 2 cut(s) 56, 1375
NspV TTCGAA 1 cut(s) 1054
OliI CACNNNNGTG 1 cut(s) 338
PauI GCGCGC 1 cut(s) 1152
PcsI WCGNNNNNNNCGW 1 cut(s) 1153
PfeI GAWTC 2 cut(s) 133, 910
PinAI ACCGGT 1 cut(s) 1451
PkrI GCNGC 1 cut(s) 1105
Ple19I CGATCG 1 cut(s) 442
PleI GAGTC 1 cut(s) 160
PmaCI CACGTG 1 cut(s) 604
PmlI CACGTG 1 cut(s) 604
PpsI GAGTC 1 cut(s) 160
Ppu21I YACGTR 1 cut(s) 604
PpuMI RGGWCCY 1 cut(s) 38
PshAI GACNNNNGTC 1 cut(s) 43
PshBI ATTAAT 1 cut(s) 237
Psp1406I AACGTT 1 cut(s) 406
Psp5II RGGWCCY 1 cut(s) 38
Psp6I CCWGG 2 cut(s) 41, 417
PspCI CACGTG 1 cut(s) 604
PspGI CCWGG 2 cut(s) 41, 417
PspN4I GGNNCC 7 cut(s) 40, 322, 521, 629, 1189, 1341, 1450
PspPI GGNCC 9 cut(s) 38, 81, 421, 520, 627, 722, 752, 1187, 1340
PspPPI RGGWCCY 1 cut(s) 38
PstNI CAGNNNCTG 1 cut(s) 1373
PsuI RGATCY 2 cut(s) 223, 360
PteI GCGCGC 1 cut(s) 1152
PvuI CGATCG 1 cut(s) 442
RsaI GTAC 1 cut(s) 264
RsaNI GTAC 1 cut(s) 263
RseI CAYNNNNRTG 2 cut(s) 338, 602
SaqAI TTAA 2 cut(s) 237, 759
SatI GCNGC 1 cut(s) 1104
Sau96I GGNCC 9 cut(s) 38, 81, 421, 520, 627, 722, 752, 1187, 1340
SchI GAGTC 1 cut(s) 160
ScrFI CCNGG 2 cut(s) 43, 419
SduI GDGCHC 2 cut(s) 609, 1168
SfaNI GCATC 2 cut(s) 78, 1315
SfcI CTRYAG 1 cut(s) 717
SfuI TTCGAA 1 cut(s) 1054
SgrAI CRCCGGYG 1 cut(s) 1451
SinI GGWCC 4 cut(s) 38, 520, 1187, 1340
SmiMI CAYNNNNRTG 2 cut(s) 338, 602
SmlI CTYRAG 3 cut(s) 98, 938, 1291
SmoI CTYRAG 3 cut(s) 98, 938, 1291
Sse9I AATT 7 cut(s) 216, 556, 996, 1197, 1279, 1312, 1443
SsiI CCGC 3 cut(s) 194, 424, 660
SspMI CTAG 3 cut(s) 806, 1013, 1459
StyD4I CCNGG 2 cut(s) 41, 417
StyI CCWWGG 2 cut(s) 84, 187
TaaI ACNGT 4 cut(s) 383, 667, 703, 1369
TaiI ACGT 4 cut(s) 409, 481, 606, 960
TaqI TCGA 3 cut(s) 169, 245, 1054
TasI AATT 7 cut(s) 216, 556, 996, 1197, 1279, 1312, 1443
TfiI GAWTC 2 cut(s) 133, 910
Tru1I TTAA 2 cut(s) 237, 759
Tru9I TTAA 2 cut(s) 237, 759
TseFI GTSAC 2 cut(s) 56, 1375
TseI GCWGC 1 cut(s) 1103
Tsp45I GTSAC 2 cut(s) 56, 1375
TspDTI ATGAA 2 cut(s) 104, 777
TspGWI ACGGA 3 cut(s) 159, 684, 965
VpaK11BI GGWCC 4 cut(s) 38, 520, 1187, 1340
VspI ATTAAT 1 cut(s) 237
XapI RAATTY 1 cut(s) 1279
XcmI CCANNNNNNNNNTGG 1 cut(s) 902
XspI CTAG 3 cut(s) 806, 1013, 1459
ZraI GACGTC 1 cut(s) 479
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.