Ribonuclease H protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 113 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 207 |
| AccIII | TCCGGA | 1 cut(s) | 310 |
| AclWI | GGATC | 1 cut(s) | 152 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 101, 169, 207 |
| AgsI | TTSAA | 2 cut(s) | 101, 440 |
| AluBI | AGCT | 1 cut(s) | 305 |
| AluI | AGCT | 1 cut(s) | 305 |
| AlwI | GGATC | 1 cut(s) | 152 |
| Aor13HI | TCCGGA | 1 cut(s) | 310 |
| AsuC2I | CCSGG | 1 cut(s) | 358 |
| AsuHPI | GGTGA | 2 cut(s) | 116, 342 |
| BanI | GGYRCC | 1 cut(s) | 113 |
| BauI | CACGAG | 1 cut(s) | 153 |
| BccI | CCATC | 2 cut(s) | 49, 79 |
| BceAI | ACGGC | 1 cut(s) | 411 |
| BclI | TGATCA | 1 cut(s) | 376 |
| BcnI | CCSGG | 1 cut(s) | 358 |
| BfmI | CTRYAG | 1 cut(s) | 118 |
| Bme1390I | CCNGG | 1 cut(s) | 358 |
| BmiI | GGNNCC | 2 cut(s) | 115, 199 |
| BmrFI | CCNGG | 1 cut(s) | 358 |
| BmsI | GCATC | 2 cut(s) | 139, 356 |
| BoxI | GACNNNNGTC | 1 cut(s) | 462 |
| BpuMI | CCSGG | 1 cut(s) | 358 |
| BsaJI | CCNNGG | 2 cut(s) | 168, 356 |
| BsaWI | WCCGGW | 1 cut(s) | 310 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 101, 169, 207 |
| BseAI | TCCGGA | 1 cut(s) | 310 |
| BseDI | CCNNGG | 2 cut(s) | 168, 356 |
| BseGI | GGATG | 1 cut(s) | 94 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 101, 169, 207 |
| BshNI | GGYRCC | 1 cut(s) | 113 |
| BsiSI | CCGG | 2 cut(s) | 311, 358 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 101, 169, 207 |
| Bsp13I | TCCGGA | 1 cut(s) | 310 |
| Bsp143I | GATC | 2 cut(s) | 157, 376 |
| BspEI | TCCGGA | 1 cut(s) | 310 |
| BspLI | GGNNCC | 2 cut(s) | 115, 199 |
| BspPI | GGATC | 1 cut(s) | 152 |
| BspT107I | GGYRCC | 1 cut(s) | 113 |
| BssECI | CCNNGG | 2 cut(s) | 168, 356 |
| BssMI | GATC | 2 cut(s) | 157, 376 |
| BssSI | CACGAG | 1 cut(s) | 153 |
| Bst2BI | CACGAG | 1 cut(s) | 153 |
| Bst4CI | ACNGT | 2 cut(s) | 122, 464 |
| BstDEI | CTNAG | 1 cut(s) | 341 |
| BstDSI | CCRYGG | 1 cut(s) | 168 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 99 |
| BstF5I | GGATG | 1 cut(s) | 94 |
| BstKTI | GATC | 2 cut(s) | 160, 379 |
| BstMBI | GATC | 2 cut(s) | 157, 376 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 462 |
| BstSCI | CCNGG | 1 cut(s) | 356 |
| BstSFI | CTRYAG | 1 cut(s) | 118 |
| BtgI | CCRYGG | 1 cut(s) | 168 |
| BtsCI | GGATG | 1 cut(s) | 94 |
| CviAII | CATG | 1 cut(s) | 291 |
| CviJI | RGCY | 3 cut(s) | 174, 305, 340 |
| CviKI_1 | RGCY | 3 cut(s) | 174, 305, 340 |
| DdeI | CTNAG | 1 cut(s) | 341 |
| DpnI | GATC | 2 cut(s) | 159, 378 |
| DpnII | GATC | 2 cut(s) | 157, 376 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 99 |
| FaeI | CATG | 1 cut(s) | 294 |
| FaiI | YATR | 9 cut(s) | 27, 29, 177, 249, 251, 270, 292, 300, 330 |
| FatI | CATG | 1 cut(s) | 290 |
| FbaI | TGATCA | 1 cut(s) | 376 |
| FokI | GGATG | 1 cut(s) | 101 |
| HapII | CCGG | 2 cut(s) | 311, 358 |
| Hin1II | CATG | 1 cut(s) | 294 |
| HinfI | GANTC | 2 cut(s) | 138, 470 |
| HpaII | CCGG | 2 cut(s) | 311, 358 |
| HphI | GGTGA | 2 cut(s) | 116, 342 |
| Hpy188I | TCNGA | 4 cut(s) | 137, 186, 238, 408 |
| Hpy188III | TCNNGA | 6 cut(s) | 98, 146, 155, 311, 370, 467 |
| HpyAV | CCTTC | 4 cut(s) | 95, 104, 152, 408 |
| HpyCH4III | ACNGT | 2 cut(s) | 122, 464 |
| HpyCH4V | TGCA | 1 cut(s) | 4 |
| HpyF3I | CTNAG | 1 cut(s) | 341 |
| Hsp92II | CATG | 1 cut(s) | 294 |
| Kpn2I | TCCGGA | 1 cut(s) | 310 |
| Ksp22I | TGATCA | 1 cut(s) | 376 |
| Kzo9I | GATC | 2 cut(s) | 157, 376 |
| LmnI | GCTCC | 1 cut(s) | 302 |
| LpnPI | CCDG | 6 cut(s) | 34, 324, 355, 371, 371, 456 |
| LweI | GCATC | 2 cut(s) | 139, 356 |
| MaeIII | GTNAC | 1 cut(s) | 471 |
| MalI | GATC | 2 cut(s) | 159, 378 |
| MboI | GATC | 2 cut(s) | 157, 376 |
| MboII | GAAGA | 1 cut(s) | 119 |
| MluCI | AATT | 1 cut(s) | 230 |
| MlyI | GAGTC | 1 cut(s) | 479 |
| MnlI | CCTC | 3 cut(s) | 105, 354, 411 |
| MroI | TCCGGA | 1 cut(s) | 310 |
| MseI | TTAA | 2 cut(s) | 81, 390 |
| MslI | CAYNNNNRTG | 1 cut(s) | 83 |
| MspI | CCGG | 2 cut(s) | 311, 358 |
| MspR9I | CCNGG | 1 cut(s) | 358 |
| NciI | CCSGG | 1 cut(s) | 358 |
| NdeII | GATC | 2 cut(s) | 157, 376 |
| NlaIII | CATG | 1 cut(s) | 294 |
| NlaIV | GGNNCC | 2 cut(s) | 115, 199 |
| NmuCI | GTSAC | 1 cut(s) | 471 |
| PfeI | GAWTC | 1 cut(s) | 138 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 207 |
| PleI | GAGTC | 1 cut(s) | 478 |
| PpsI | GAGTC | 1 cut(s) | 478 |
| PshAI | GACNNNNGTC | 1 cut(s) | 462 |
| PspN4I | GGNNCC | 2 cut(s) | 115, 199 |
| RseI | CAYNNNNRTG | 1 cut(s) | 83 |
| SaqAI | TTAA | 2 cut(s) | 81, 390 |
| Sau3AI | GATC | 2 cut(s) | 157, 376 |
| SchI | GAGTC | 1 cut(s) | 479 |
| ScrFI | CCNGG | 1 cut(s) | 358 |
| SetI | ASST | 6 cut(s) | 106, 119, 307, 390, 422, 445 |
| SfaNI | GCATC | 2 cut(s) | 139, 356 |
| SfcI | CTRYAG | 1 cut(s) | 118 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 83 |
| Sse9I | AATT | 1 cut(s) | 230 |
| StyD4I | CCNGG | 1 cut(s) | 356 |
| TaaI | ACNGT | 2 cut(s) | 122, 464 |
| TasI | AATT | 1 cut(s) | 230 |
| TfiI | GAWTC | 1 cut(s) | 138 |
| Tru1I | TTAA | 2 cut(s) | 81, 390 |
| Tru9I | TTAA | 2 cut(s) | 81, 390 |
| TseFI | GTSAC | 1 cut(s) | 471 |
| Tsp45I | GTSAC | 1 cut(s) | 471 |
| TspDTI | ATGAA | 3 cut(s) | 67, 192, 333 |
| TspGWI | ACGGA | 1 cut(s) | 119 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 207 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 99 |